Guide to the Human Genome
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Name: SLC8A2 Sequence: fasta or formatted (921aa) NCBI GI: 57163987
Description:

solute carrier family 8 member 2

Referenced in:

Solute Carrier Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.3         86           2
 C cysteine            2.1         19           1
 D aspartate           5.5         51           3
 E glutamate           7.1         65           5
 F phenylalanine       5.2         48           2
 G glycine             9.7         89           3
 H histidine           1.7         16           1
 I isoleucine          5.3         49           3
 K lysine              3.7         34           2
 L leucine            10.1         93           3
 M methionine          1.4         13           1
 N asparagine          2.2         20           1
 P proline             4.6         42           4
 Q glutamine           2.4         22           2
 R arginine            5.3         49           3
 S serine              5.5         51           2
 T threonine           5.4         50           2
 V valine              9.0         83           2
 W tryptophan          1.4         13           1
 Y tyrosine            3.0         28           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 8 member 2 
SLC8A3                0.701   solute carrier family 8 (sodium/calcium exchanger), ...
SLC8A3                0.700   solute carrier family 8 (sodium/calcium exchanger), ...
SLC8A3                0.695   solute carrier family 8 (sodium/calcium exchanger), ...
SLC8A3                0.685   solute carrier family 8 (sodium/calcium exchanger), ...
SLC8A1                0.653   solute carrier family 8 (sodium/calcium exchanger),...
SLC8A1                0.650   solute carrier family 8 (sodium/calcium exchanger),...
SLC8A1                0.650   solute carrier family 8 (sodium/calcium exchanger), ...
SLC8A1                0.648   solute carrier family 8 (sodium/calcium exchanger),...
SLC8A3                0.260   solute carrier family 8 (sodium/calcium exchanger),...
SLC8A3                0.255   solute carrier family 8 (sodium/calcium exchanger), ...
SLC24A2               0.028   solute carrier family 24 (sodium/potassium/calcium ex...
GPR98                 0.025   G protein-coupled receptor 98 precursor 
SLC24A3               0.022   solute carrier family 24 (sodium/potassium/calcium e...
FRAS1                 0.022   Fraser syndrome 1 
SLC24A1               0.021   solute carrier family 24 (sodium/potassium/calcium ex...
FREM3                 0.021   PREDICTED: FRAS1 related extracellular matrix 3 [Ho...
FREM3                 0.021   PREDICTED: FRAS1 related extracellular matrix 3 [Ho...
FREM3                 0.021   PREDICTED: FRAS1 related extracellular matrix 3 [Ho...
SLC24A4               0.019   solute carrier family 24 member 4 isoform 3 
SLC24A4               0.019   solute carrier family 24 member 4 isoform 2 precurso...
SLC24A4               0.019   solute carrier family 24 member 4 isoform 1 precurso...
SLC24A5               0.019   solute carrier family 24, member 5 
FREM2                 0.016   FRAS1-related extracellular matrix protein 2 precurs...
ITGB4                 0.011   integrin beta 4 isoform 2 precursor 
ITGB4                 0.011   integrin beta 4 isoform 1 precursor 
ITGB4                 0.011   integrin beta 4 isoform 3 precursor 
SLC24A6               0.007   solute carrier family 24 member 6 
FREM1                 0.007   FRAS1 related extracellular matrix 1 
HTR6                  0.006   5-hydroxytryptamine (serotonin) receptor 6 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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