Guide to the Human Genome
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Name: SLC24A4 Sequence: fasta or formatted (586aa) NCBI GI: 29788985
Description:

solute carrier family 24 member 4 isoform 2 precursor

Referenced in:

Solute Carrier Families

Other entries for this name:
alt prot [605aa] solute carrier family 24 member 4 isoform 1 precursor
alt prot [558aa] solute carrier family 24 member 4 isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.3         37           2
 C cysteine            2.4         14           2
 D aspartate           3.4         20           2
 E glutamate           4.4         26           1
 F phenylalanine       5.8         34           2
 G glycine             7.0         41           1
 H histidine           1.4          8           1
 I isoleucine          7.8         46           3
 K lysine              3.9         23           1
 L leucine             9.6         56           3
 M methionine          3.1         18           1
 N asparagine          4.8         28           1
 P proline             6.1         36           4
 Q glutamine           3.2         19           2
 R arginine            3.8         22           1
 S serine              6.0         35           3
 T threonine           5.1         30           1
 V valine             11.3         66           2
 W tryptophan          2.0         12           2
 Y tyrosine            2.6         15           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 24 member 4 isoform 2 precurso... 
SLC24A4               0.990   solute carrier family 24 member 4 isoform 1 precurso...
SLC24A4               0.908   solute carrier family 24 member 4 isoform 3 
SLC24A3               0.581   solute carrier family 24 (sodium/potassium/calcium e...
SLC24A2               0.314   solute carrier family 24 (sodium/potassium/calcium ex...
SLC24A1               0.170   solute carrier family 24 (sodium/potassium/calcium ex...
SLC24A5               0.153   solute carrier family 24, member 5 
SLC24A6               0.081   solute carrier family 24 member 6 
SLC8A1                0.034   solute carrier family 8 (sodium/calcium exchanger), ...
SLC8A1                0.034   solute carrier family 8 (sodium/calcium exchanger),...
SLC8A1                0.034   solute carrier family 8 (sodium/calcium exchanger),...
SLC8A1                0.034   solute carrier family 8 (sodium/calcium exchanger),...
SLC8A3                0.032   solute carrier family 8 (sodium/calcium exchanger), ...
SLC8A3                0.032   solute carrier family 8 (sodium/calcium exchanger), ...
SLC8A3                0.032   solute carrier family 8 (sodium/calcium exchanger), ...
SLC8A3                0.032   solute carrier family 8 (sodium/calcium exchanger), ...
SLC8A3                0.030   solute carrier family 8 (sodium/calcium exchanger), ...
SLC8A3                0.030   solute carrier family 8 (sodium/calcium exchanger),...
SLC8A2                0.030   solute carrier family 8 member 2 
DGKK                  0.015   diacylglycerol kinase kappa 
FOXJ2                 0.013   forkhead box J2 
SLC16A2               0.012   solute carrier family 16, member 2 
FOXG1                 0.012   forkhead box G1 
MYST3                 0.012   MYST histone acetyltransferase (monocytic leukemia)...
MYST3                 0.012   MYST histone acetyltransferase (monocytic leukemia)...
MYST3                 0.012   MYST histone acetyltransferase (monocytic leukemia)...
CDX2                  0.011   caudal type homeobox 2 
MEF2A                 0.011   myocyte enhancer factor 2A isoform 4 
MEF2A                 0.011   myocyte enhancer factor 2A isoform 3 
MEF2A                 0.011   myocyte enhancer factor 2A isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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