Guide to the Human Genome
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Name: SLC24A5 Sequence: fasta or formatted (500aa) NCBI GI: 45504369
Description:

solute carrier family 24, member 5

Referenced in:

Skin and Related Tissues
Solute Carrier Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.2         36           3
 C cysteine            3.0         15           2
 D aspartate           3.6         18           1
 E glutamate           3.8         19           1
 F phenylalanine       5.4         27           2
 G glycine             8.4         42           2
 H histidine           0.6          3           1
 I isoleucine         10.4         52           3
 K lysine              3.2         16           2
 L leucine            12.4         62           4
 M methionine          2.6         13           1
 N asparagine          3.0         15           2
 P proline             4.0         20           2
 Q glutamine           2.8         14           2
 R arginine            3.6         18           2
 S serine              8.6         43           2
 T threonine           6.4         32           2
 V valine              5.2         26           1
 W tryptophan          2.2         11           1
 Y tyrosine            3.6         18           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 24, member 5 
SLC24A4               0.182   solute carrier family 24 member 4 isoform 3 
SLC24A4               0.182   solute carrier family 24 member 4 isoform 2 precurso...
SLC24A4               0.182   solute carrier family 24 member 4 isoform 1 precurso...
SLC24A3               0.175   solute carrier family 24 (sodium/potassium/calcium e...
SLC24A2               0.155   solute carrier family 24 (sodium/potassium/calcium ex...
SLC24A1               0.147   solute carrier family 24 (sodium/potassium/calcium ex...
SLC24A6               0.072   solute carrier family 24 member 6 
SLC8A3                0.040   solute carrier family 8 (sodium/calcium exchanger), ...
SLC8A3                0.040   solute carrier family 8 (sodium/calcium exchanger), ...
SLC8A3                0.040   solute carrier family 8 (sodium/calcium exchanger), ...
SLC8A3                0.040   solute carrier family 8 (sodium/calcium exchanger), ...
SLC8A1                0.040   solute carrier family 8 (sodium/calcium exchanger), ...
SLC8A1                0.040   solute carrier family 8 (sodium/calcium exchanger),...
SLC8A1                0.040   solute carrier family 8 (sodium/calcium exchanger),...
SLC8A1                0.040   solute carrier family 8 (sodium/calcium exchanger),...
SLC8A2                0.035   solute carrier family 8 member 2 
SLC8A3                0.020   solute carrier family 8 (sodium/calcium exchanger), ...
SLC8A3                0.020   solute carrier family 8 (sodium/calcium exchanger),...
MADD                  0.008   MAP-kinase activating death domain-containing prote...
MADD                  0.008   MAP-kinase activating death domain-containing prote...
MADD                  0.008   MAP-kinase activating death domain-containing prote...
MADD                  0.008   MAP-kinase activating death domain-containing protei...
MADD                  0.008   MAP-kinase activating death domain-containing prote...
MADD                  0.008   MAP-kinase activating death domain-containing prote...
MADD                  0.008   MAP-kinase activating death domain-containing prote...
MADD                  0.008   MAP-kinase activating death domain-containing prote...
MADD                  0.008   MAP-kinase activating death domain-containing prote...
MADD                  0.008   MAP-kinase activating death domain-containing prote...
SLC46A3               0.007   solute carrier family 46, member 3 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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