Guide to the Human Genome
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Name: ANO1 Sequence: fasta or formatted (986aa) NCBI GI: 194306539
Description:

anoctamin 1, calcium activated chloride channel

Referenced in:

Chloride Channels

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.3         62           3
 C cysteine            1.8         18           1
 D aspartate           5.2         51           2
 E glutamate           6.9         68           5
 F phenylalanine       5.3         52           2
 G glycine             4.9         48           2
 H histidine           2.5         25           2
 I isoleucine          6.9         68           2
 K lysine              7.4         73           2
 L leucine             8.9         88           2
 M methionine          3.2         32           1
 N asparagine          4.0         39           2
 P proline             5.0         49           2
 Q glutamine           2.7         27           2
 R arginine            6.1         60           2
 S serine              5.6         55           2
 T threonine           4.5         44           2
 V valine              6.7         66           2
 W tryptophan          1.5         15           1
 Y tyrosine            4.7         46           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   anoctamin 1, calcium activated chloride channel [Ho... 
ANO2                  0.572   anoctamin 2 
ANO4                  0.334   anoctamin 4 
ANO3                  0.309   transmembrane protein 16C 
ANO5                  0.305   anoctamin 5 isoform b 
ANO5                  0.305   anoctamin 5 isoform a 
ANO6                  0.281   anoctamin 6 isoform b 
ANO6                  0.281   anoctamin 6 isoform a 
ANO6                  0.271   anoctamin 6 isoform c 
ANO6                  0.271   anoctamin 6 isoform c 
ANO7                  0.260   transmembrane protein 16G isoform NGEP long 
ANO9                  0.197   tumor protein p53 inducible protein 5 
ANO10                 0.052   transmembrane protein 16K 
ANO8                  0.032   anoctamin 8 
LOC645634             0.027   PREDICTED: hypothetical protein 
LOC645634             0.027   PREDICTED: hypothetical protein 
LOC645634             0.027   PREDICTED: hypothetical protein 
WDR87                 0.005   NYD-SP11 protein 
LOC100294088          0.005   PREDICTED: hypothetical protein, partial 
FAM124A               0.004   hypothetical protein LOC220108 
LOC400352             0.004   PREDICTED: similar to Putative golgin subfamily A m...
LOC100132816          0.004   PREDICTED: similar to Putative golgin subfamily A m...
CHAF1A                0.004   chromatin assembly factor 1, subunit A (p150) 
DDX60                 0.004   DEAD (Asp-Glu-Ala-Asp) box polypeptide 60 
TCHH                  0.003   trichohyalin 
PALMD                 0.003   palmdelphin 
ZNF434                0.003   zinc finger protein 434 
AKD1                  0.003   adenylate kinase domain containing 1 isoform 1 [Hom...
TOP1                  0.003   DNA topoisomerase I 
ZNF148                0.003   zinc finger protein 148 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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