Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: ANO5 Sequence: fasta or formatted (912aa) NCBI GI: 218081589
Description:

anoctamin 5 isoform b

Referenced in:

Chloride Channels

Other entries for this name:
alt prot [913aa] anoctamin 5 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.3         48           2
 C cysteine            1.4         13           1
 D aspartate           4.2         38           2
 E glutamate           7.6         69           3
 F phenylalanine       7.7         70           2
 G glycine             3.8         35           2
 H histidine           2.0         18           1
 I isoleucine          6.4         58           2
 K lysine              5.9         54           2
 L leucine             9.9         90           2
 M methionine          3.0         27           1
 N asparagine          4.1         37           2
 P proline             4.5         41           2
 Q glutamine           3.5         32           3
 R arginine            5.2         47           3
 S serine              6.6         60           3
 T threonine           5.8         53           2
 V valine              6.0         55           2
 W tryptophan          2.0         18           2
 Y tyrosine            5.4         49           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   anoctamin 5 isoform b 
ANO5                  0.997   anoctamin 5 isoform a 
ANO6                  0.465   anoctamin 6 isoform b 
ANO6                  0.465   anoctamin 6 isoform a 
ANO6                  0.442   anoctamin 6 isoform c 
ANO6                  0.442   anoctamin 6 isoform c 
ANO4                  0.381   anoctamin 4 
ANO3                  0.363   transmembrane protein 16C 
ANO1                  0.330   anoctamin 1, calcium activated chloride channel [Ho...
ANO2                  0.326   anoctamin 2 
ANO7                  0.282   transmembrane protein 16G isoform NGEP long 
ANO9                  0.224   tumor protein p53 inducible protein 5 
ANO10                 0.070   transmembrane protein 16K 
ANO8                  0.046   anoctamin 8 
LOC645634             0.023   PREDICTED: hypothetical protein 
LOC645634             0.022   PREDICTED: hypothetical protein 
LOC645634             0.022   PREDICTED: hypothetical protein 
FAM161B               0.007   hypothetical protein LOC145483 
PKD1L2                0.004   polycystin 1-like 2 isoform a 
TEX11                 0.004   testis expressed sequence 11 isoform 2 
TEX11                 0.004   testis expressed sequence 11 isoform 1 
TRIM38                0.003   tripartite motif-containing 38 
ARMCX6                0.003   armadillo repeat containing, X-linked 6 
ARMCX6                0.003   armadillo repeat containing, X-linked 6 
FAT1                  0.003   FAT tumor suppressor 1 precursor 
CDC42BPA              0.003   CDC42-binding protein kinase alpha isoform B 
CAMSAP1L1             0.003   calmodulin regulated spectrin-associated protein 1-l...
PTGER3                0.003   prostaglandin E receptor 3, subtype EP3 isoform 2 [H...
PTGER3                0.003   prostaglandin E receptor 3, subtype EP3 isoform 5 [H...
PTGER3                0.003   prostaglandin E receptor 3, subtype EP3 isoform 4 [H...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press