Guide to the Human Genome
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Name: ANO6 Sequence: fasta or formatted (929aa) NCBI GI: 218156307
Description:

anoctamin 6 isoform c

Referenced in:

Chloride Channels

Other entries for this name:
alt prot [910aa] anoctamin 6 isoform a
alt prot [892aa] anoctamin 6 isoform b
alt mRNA [929aa] anoctamin 6 isoform c
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.8         45           2
 C cysteine            2.6         24           2
 D aspartate           4.5         42           4
 E glutamate           6.2         58           4
 F phenylalanine       7.0         65           3
 G glycine             4.8         45           2
 H histidine           1.8         17           1
 I isoleucine          8.6         80           3
 K lysine              5.4         50           2
 L leucine             9.8         91           3
 M methionine          2.5         23           1
 N asparagine          4.6         43           2
 P proline             4.7         44           2
 Q glutamine           3.7         34           2
 R arginine            5.0         46           2
 S serine              5.7         53           2
 T threonine           5.1         47           2
 V valine              6.0         56           2
 W tryptophan          2.0         19           1
 Y tyrosine            5.1         47           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   anoctamin 6 isoform c 
ANO6                  1.000   anoctamin 6 isoform c 
ANO6                  0.908   anoctamin 6 isoform a 
ANO6                  0.884   anoctamin 6 isoform b 
ANO5                  0.430   anoctamin 5 isoform b 
ANO5                  0.430   anoctamin 5 isoform a 
ANO4                  0.349   anoctamin 4 
ANO3                  0.333   transmembrane protein 16C 
ANO1                  0.285   anoctamin 1, calcium activated chloride channel [Ho...
ANO2                  0.276   anoctamin 2 
ANO7                  0.247   transmembrane protein 16G isoform NGEP long 
ANO9                  0.201   tumor protein p53 inducible protein 5 
ANO10                 0.078   transmembrane protein 16K 
ANO8                  0.049   anoctamin 8 
LOC645634             0.023   PREDICTED: hypothetical protein 
LOC645634             0.021   PREDICTED: hypothetical protein 
LOC645634             0.021   PREDICTED: hypothetical protein 
C15orf40              0.005   hypothetical protein LOC123207 isoform b 
NXNL2                 0.005   nucleoredoxin-like 2 isoform 2 
NPC1L1                0.005   Niemann-Pick C1-like protein 1 isoform 1 
MYL10                 0.004   myosin, light chain 10, regulatory 
TAS2R8                0.004   taste receptor, type 2, member 8 
ADRA1A                0.004   alpha-1A-adrenergic receptor isoform 2 
TAS2R60               0.004   taste receptor, type 2, member 60 
RPGRIP1L              0.004   RPGRIP1-like isoform a 
CCNJL                 0.004   cyclin J-like 
LOC100289388          0.003   PREDICTED: hypothetical protein XP_002343124 
SRP9                  0.003   signal recognition particle 9kDa isoform 1 
MAD2L1BP              0.003   MAD2L1 binding protein isoform 1 
KRI1                  0.003   KRI1 homolog 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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