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Search of human proteins with 193794843
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|193794843 BEN domain containing 2 [Homo sapiens]
(799 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|193794843 BEN domain containing 2 [Homo sapiens] 1634 0.0
gi|168693643 decay accelerating factor for complement isoform 2 ... 58 4e-08
gi|33188429 tetratricopeptide repeat protein isoform 1 [Homo sap... 58 4e-08
gi|148664240 hypothetical protein LOC146556 isoform 1 [Homo sapi... 57 9e-08
gi|157151755 ribonuclease P/MRP 30kDa subunit isoform a [Homo sa... 52 3e-06
gi|169213867 PREDICTED: hypothetical protein LOC100128682 [Homo ... 49 2e-05
gi|169214305 PREDICTED: hypothetical protein LOC100128682 [Homo ... 49 2e-05
gi|169213267 PREDICTED: hypothetical protein LOC100128682 [Homo ... 49 2e-05
gi|238908517 colony stimulating factor 2 receptor alpha chain is... 47 7e-05
gi|169216486 PREDICTED: hCG_1742852 [Homo sapiens] 45 2e-04
gi|169216528 PREDICTED: hCG_1742852 [Homo sapiens] 45 2e-04
gi|19743817 integrin beta 1 isoform 1C-1 precursor [Homo sapiens] 45 3e-04
gi|121583542 mitogen-activated protein kinase kinase kinase 15 [... 45 3e-04
gi|205830426 solute carrier family 39 (zinc transporter), member... 45 3e-04
gi|228480284 Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRN... 44 6e-04
gi|14277126 peptidylprolyl isomerase-like 3 isoform PPIL3a [Homo... 44 6e-04
gi|239747074 PREDICTED: hypothetical protein XP_002343911 [Homo ... 43 0.001
gi|169216761 PREDICTED: hCG_1742852 [Homo sapiens] 43 0.001
gi|149588643 zinc finger protein 283 [Homo sapiens] 42 0.002
gi|59933284 RUN domain containing 2B [Homo sapiens] 42 0.002
gi|19743821 integrin beta 1 isoform 1C-2 precursor [Homo sapiens] 40 0.007
gi|223029500 EF-hand calcium binding domain 5 isoform b [Homo sa... 40 0.007
gi|47578099 selenoprotein N, 1 isoform 1 precursor [Homo sapiens] 40 0.009
gi|7669479 RNA-specific adenosine deaminase B1 isoform 3 [Homo s... 40 0.009
gi|7669477 RNA-specific adenosine deaminase B1 isoform 2 [Homo s... 40 0.009
gi|239754668 PREDICTED: mucin 12 [Homo sapiens] 38 0.032
gi|239743293 PREDICTED: mucin 12 [Homo sapiens] 38 0.032
gi|40789270 zinc finger protein 573 [Homo sapiens] 38 0.042
gi|89026265 PREDICTED: mucin 12 [Homo sapiens] 37 0.055
gi|56788397 myelin oligodendrocyte glycoprotein isoform beta4 pr... 37 0.055
>gi|193794843 BEN domain containing 2 [Homo sapiens]
Length = 799
Score = 1634 bits (4230), Expect = 0.0
Identities = 799/799 (100%), Positives = 799/799 (100%)
Query: 1 MSERTQEQDFVIITVDDSDDNNDCSIEMVEVSETADNSTNDIADDSTYVTADNPTDDTAT 60
MSERTQEQDFVIITVDDSDDNNDCSIEMVEVSETADNSTNDIADDSTYVTADNPTDDTAT
Sbjct: 1 MSERTQEQDFVIITVDDSDDNNDCSIEMVEVSETADNSTNDIADDSTYVTADNPTDDTAT 60
Query: 61 QPNFPGGNDGHHRPLQMSYGSGSVTQAGVQWHDHSSLQPQPLGLKQFFHLSLPSSWDDRR 120
QPNFPGGNDGHHRPLQMSYGSGSVTQAGVQWHDHSSLQPQPLGLKQFFHLSLPSSWDDRR
Sbjct: 61 QPNFPGGNDGHHRPLQMSYGSGSVTQAGVQWHDHSSLQPQPLGLKQFFHLSLPSSWDDRR 120
Query: 121 TPPCPVAHGDQIVSQINHPVHLRRYSYNSEEVDFPKRGRFYTPEVQSSISPPAERQETHA 180
TPPCPVAHGDQIVSQINHPVHLRRYSYNSEEVDFPKRGRFYTPEVQSSISPPAERQETHA
Sbjct: 121 TPPCPVAHGDQIVSQINHPVHLRRYSYNSEEVDFPKRGRFYTPEVQSSISPPAERQETHA 180
Query: 181 WASPAVTSLESAACHELQEADLSESLSYPRIVSSSSLQQYVAQGGSFPCFGMPWNFISGG 240
WASPAVTSLESAACHELQEADLSESLSYPRIVSSSSLQQYVAQGGSFPCFGMPWNFISGG
Sbjct: 181 WASPAVTSLESAACHELQEADLSESLSYPRIVSSSSLQQYVAQGGSFPCFGMPWNFISGG 240
Query: 241 AESTNAVISFANATTAVPMAVLSRRESSLANNPGVVNYSALPENENVGPGRALSSFCFHP 300
AESTNAVISFANATTAVPMAVLSRRESSLANNPGVVNYSALPENENVGPGRALSSFCFHP
Sbjct: 241 AESTNAVISFANATTAVPMAVLSRRESSLANNPGVVNYSALPENENVGPGRALSSFCFHP 300
Query: 301 NLEMPERPANSSKNSTETANYPTLMGNYNGQNTASLSVFIPPYFAEKIILTEMPGTTETN 360
NLEMPERPANSSKNSTETANYPTLMGNYNGQNTASLSVFIPPYFAEKIILTEMPGTTETN
Sbjct: 301 NLEMPERPANSSKNSTETANYPTLMGNYNGQNTASLSVFIPPYFAEKIILTEMPGTTETN 360
Query: 361 VENNSQTVYYPALSGNTSAPYPASSYLPITSNFESGPQMSYGTMSYSTEMKNNCDQDDAS 420
VENNSQTVYYPALSGNTSAPYPASSYLPITSNFESGPQMSYGTMSYSTEMKNNCDQDDAS
Sbjct: 361 VENNSQTVYYPALSGNTSAPYPASSYLPITSNFESGPQMSYGTMSYSTEMKNNCDQDDAS 420
Query: 421 ASACLTPDFALLPLNILVKVDTNTENSVNTMNRSTLLDSDSGQDSSSSSVCIPPKYGYLG 480
ASACLTPDFALLPLNILVKVDTNTENSVNTMNRSTLLDSDSGQDSSSSSVCIPPKYGYLG
Sbjct: 421 ASACLTPDFALLPLNILVKVDTNTENSVNTMNRSTLLDSDSGQDSSSSSVCIPPKYGYLG 480
Query: 481 DPKRNVRVLKIHLLAVQNMAKPKQAACYLVRILFSKEILISSSVDIHLKDSQSLDPNKMA 540
DPKRNVRVLKIHLLAVQNMAKPKQAACYLVRILFSKEILISSSVDIHLKDSQSLDPNKMA
Sbjct: 481 DPKRNVRVLKIHLLAVQNMAKPKQAACYLVRILFSKEILISSSVDIHLKDSQSLDPNKMA 540
Query: 541 ALREYLATTFPTCDLHEHGKDWQDCISGINSMIYCLCSEGKSTPKTVRKNKKRTNRVASA 600
ALREYLATTFPTCDLHEHGKDWQDCISGINSMIYCLCSEGKSTPKTVRKNKKRTNRVASA
Sbjct: 541 ALREYLATTFPTCDLHEHGKDWQDCISGINSMIYCLCSEGKSTPKTVRKNKKRTNRVASA 600
Query: 601 SADRNDQRGRDGGEGCSWMFQPMNNSKMREKRNLQPNSNAIPEGMREPSTDNPEEPGEAW 660
SADRNDQRGRDGGEGCSWMFQPMNNSKMREKRNLQPNSNAIPEGMREPSTDNPEEPGEAW
Sbjct: 601 SADRNDQRGRDGGEGCSWMFQPMNNSKMREKRNLQPNSNAIPEGMREPSTDNPEEPGEAW 660
Query: 661 SYFGRPWRNIRMPCSVLTLAKTKSCASLSARYLIQKLFTKDVLVQSNVYGNLKHGLCALD 720
SYFGRPWRNIRMPCSVLTLAKTKSCASLSARYLIQKLFTKDVLVQSNVYGNLKHGLCALD
Sbjct: 661 SYFGRPWRNIRMPCSVLTLAKTKSCASLSARYLIQKLFTKDVLVQSNVYGNLKHGLCALD 720
Query: 721 PNKISALREFLQENYPICDLSENGRDWKSCVTSINSGIRSLRHDVRRAEARSQSLPAVTP 780
PNKISALREFLQENYPICDLSENGRDWKSCVTSINSGIRSLRHDVRRAEARSQSLPAVTP
Sbjct: 721 PNKISALREFLQENYPICDLSENGRDWKSCVTSINSGIRSLRHDVRRAEARSQSLPAVTP 780
Query: 781 PELEQESKPGDPDATDPST 799
PELEQESKPGDPDATDPST
Sbjct: 781 PELEQESKPGDPDATDPST 799
>gi|168693643 decay accelerating factor for complement isoform 2
precursor [Homo sapiens]
Length = 440
Score = 57.8 bits (138), Expect = 4e-08
Identities = 38/98 (38%), Positives = 47/98 (47%), Gaps = 9/98 (9%)
Query: 25 SIEMVEVSETADNSTNDIADDSTYVTADNPTDDTA-----TQPNFPGGN-DGHHRPLQMS 78
++ EVS T+ +T + T P T T PN G G R L
Sbjct: 303 NVPTTEVSPTSQKTTTKTTTPNAQATRSTPVSRTTKHFHETTPNKGSGTTSGTTRLLS-- 360
Query: 79 YGSGSVTQAGVQWHDHSSLQPQPLGLKQFFHLSLPSSW 116
GS VTQAG++W D SSLQ + G K+ FH SLPSSW
Sbjct: 361 -GSRPVTQAGMRWCDRSSLQSRTPGFKRSFHFSLPSSW 397
>gi|33188429 tetratricopeptide repeat protein isoform 1 [Homo sapiens]
Length = 1079
Score = 57.8 bits (138), Expect = 4e-08
Identities = 25/40 (62%), Positives = 30/40 (75%)
Query: 86 QAGVQWHDHSSLQPQPLGLKQFFHLSLPSSWDDRRTPPCP 125
+AG+QW D SSLQP P G K+F HLSLP+SW+ R P CP
Sbjct: 995 RAGMQWCDLSSLQPPPPGFKRFSHLSLPNSWNYRHLPSCP 1034
>gi|148664240 hypothetical protein LOC146556 isoform 1 [Homo
sapiens]
Length = 440
Score = 56.6 bits (135), Expect = 9e-08
Identities = 28/43 (65%), Positives = 29/43 (67%)
Query: 81 SGSVTQAGVQWHDHSSLQPQPLGLKQFFHLSLPSSWDDRRTPP 123
S SV QAGVQW + SLQP P G KQF L LPSSWD R PP
Sbjct: 358 SRSVAQAGVQWRNLGSLQPLPPGFKQFSCLILPSSWDYRSVPP 400
>gi|157151755 ribonuclease P/MRP 30kDa subunit isoform a [Homo
sapiens]
Length = 322
Score = 51.6 bits (122), Expect = 3e-06
Identities = 25/33 (75%), Positives = 26/33 (78%)
Query: 81 SGSVTQAGVQWHDHSSLQPQPLGLKQFFHLSLP 113
S SVTQAGVQWH+ SLQP PLGLK HLSLP
Sbjct: 267 SHSVTQAGVQWHNLGSLQPLPLGLKPSSHLSLP 299
>gi|169213867 PREDICTED: hypothetical protein LOC100128682 [Homo
sapiens]
Length = 299
Score = 48.5 bits (114), Expect = 2e-05
Identities = 29/46 (63%), Positives = 29/46 (63%), Gaps = 4/46 (8%)
Query: 81 SGSVTQAGVQWHDH-SSLQPQPLGLKQFFHLSLPSSWDDRRTPPCP 125
S SVTQAGVQW D SLQP P G F LSLP SWD R PP P
Sbjct: 129 SCSVTQAGVQWCDDLGSLQPPPPG---FSCLSLPGSWDYRHPPPHP 171
>gi|169214305 PREDICTED: hypothetical protein LOC100128682 [Homo
sapiens]
Length = 299
Score = 48.5 bits (114), Expect = 2e-05
Identities = 29/46 (63%), Positives = 29/46 (63%), Gaps = 4/46 (8%)
Query: 81 SGSVTQAGVQWHDH-SSLQPQPLGLKQFFHLSLPSSWDDRRTPPCP 125
S SVTQAGVQW D SLQP P G F LSLP SWD R PP P
Sbjct: 129 SCSVTQAGVQWCDDLGSLQPPPPG---FSCLSLPGSWDYRHPPPHP 171
>gi|169213267 PREDICTED: hypothetical protein LOC100128682 [Homo
sapiens]
Length = 299
Score = 48.5 bits (114), Expect = 2e-05
Identities = 29/46 (63%), Positives = 29/46 (63%), Gaps = 4/46 (8%)
Query: 81 SGSVTQAGVQWHDH-SSLQPQPLGLKQFFHLSLPSSWDDRRTPPCP 125
S SVTQAGVQW D SLQP P G F LSLP SWD R PP P
Sbjct: 129 SCSVTQAGVQWCDDLGSLQPPPPG---FSCLSLPGSWDYRHPPPHP 171
>gi|238908517 colony stimulating factor 2 receptor alpha chain
isoform f precursor [Homo sapiens]
Length = 434
Score = 47.0 bits (110), Expect = 7e-05
Identities = 24/41 (58%), Positives = 28/41 (68%)
Query: 77 MSYGSGSVTQAGVQWHDHSSLQPQPLGLKQFFHLSLPSSWD 117
+ +GS SVTQAGVQWH+ SLQP LK+F L LP S D
Sbjct: 313 IEFGSHSVTQAGVQWHNLGSLQPPSPRLKRFSCLRLPGSDD 353
>gi|169216486 PREDICTED: hCG_1742852 [Homo sapiens]
Length = 402
Score = 45.4 bits (106), Expect = 2e-04
Identities = 23/40 (57%), Positives = 25/40 (62%)
Query: 86 QAGVQWHDHSSLQPQPLGLKQFFHLSLPSSWDDRRTPPCP 125
QAGV+ D SLQP P G K+F LSLPSSWD P P
Sbjct: 308 QAGVRCRDLDSLQPLPPGFKRFSCLSLPSSWDYSHAPSRP 347
>gi|169216528 PREDICTED: hCG_1742852 [Homo sapiens]
Length = 402
Score = 45.4 bits (106), Expect = 2e-04
Identities = 23/40 (57%), Positives = 25/40 (62%)
Query: 86 QAGVQWHDHSSLQPQPLGLKQFFHLSLPSSWDDRRTPPCP 125
QAGV+ D SLQP P G K+F LSLPSSWD P P
Sbjct: 308 QAGVRCRDLDSLQPLPPGFKRFSCLSLPSSWDYSHAPSRP 347
>gi|19743817 integrin beta 1 isoform 1C-1 precursor [Homo sapiens]
Length = 825
Score = 45.1 bits (105), Expect = 3e-04
Identities = 23/37 (62%), Positives = 25/37 (67%)
Query: 83 SVTQAGVQWHDHSSLQPQPLGLKQFFHLSLPSSWDDR 119
SV Q GVQW D SSLQP +QF LSLPS+WD R
Sbjct: 780 SVAQPGVQWCDISSLQPLTSRFQQFSCLSLPSTWDYR 816
>gi|121583542 mitogen-activated protein kinase kinase kinase 15
[Homo sapiens]
Length = 788
Score = 45.1 bits (105), Expect = 3e-04
Identities = 21/32 (65%), Positives = 23/32 (71%)
Query: 86 QAGVQWHDHSSLQPQPLGLKQFFHLSLPSSWD 117
+AGVQWHD SLQP P K+F LSL SSWD
Sbjct: 25 KAGVQWHDLGSLQPLPPRFKRFSCLSLQSSWD 56
>gi|205830426 solute carrier family 39 (zinc transporter), member 14
isoform c [Homo sapiens]
Length = 481
Score = 44.7 bits (104), Expect = 3e-04
Identities = 23/33 (69%), Positives = 25/33 (75%)
Query: 83 SVTQAGVQWHDHSSLQPQPLGLKQFFHLSLPSS 115
SV QAGVQW SSLQP PLGLK+ LSLPS+
Sbjct: 449 SVAQAGVQWCHLSSLQPLPLGLKRLSCLSLPSN 481
>gi|228480284 Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA
synthase isoform 3 [Homo sapiens]
Length = 500
Score = 43.9 bits (102), Expect = 6e-04
Identities = 22/37 (59%), Positives = 23/37 (62%)
Query: 89 VQWHDHSSLQPQPLGLKQFFHLSLPSSWDDRRTPPCP 125
+Q D SLQP P G F LSLPSSWD RR PP P
Sbjct: 1 MQCDDLGSLQPPPPGFTPFACLSLPSSWDYRRPPPHP 37
>gi|14277126 peptidylprolyl isomerase-like 3 isoform PPIL3a [Homo
sapiens]
Length = 165
Score = 43.9 bits (102), Expect = 6e-04
Identities = 22/33 (66%), Positives = 22/33 (66%)
Query: 81 SGSVTQAGVQWHDHSSLQPQPLGLKQFFHLSLP 113
S V QAGVQW D SLQP P G KQ F LSLP
Sbjct: 29 SRCVPQAGVQWRDLGSLQPPPPGFKQVFCLSLP 61
>gi|239747074 PREDICTED: hypothetical protein XP_002343911 [Homo
sapiens]
Length = 402
Score = 42.7 bits (99), Expect = 0.001
Identities = 22/40 (55%), Positives = 24/40 (60%)
Query: 86 QAGVQWHDHSSLQPQPLGLKQFFHLSLPSSWDDRRTPPCP 125
QAGV+ D SLQP P G K+F LSLPSSW P P
Sbjct: 308 QAGVRCRDLDSLQPLPPGFKRFSCLSLPSSWGYSHAPSRP 347
>gi|169216761 PREDICTED: hCG_1742852 [Homo sapiens]
Length = 402
Score = 42.7 bits (99), Expect = 0.001
Identities = 22/40 (55%), Positives = 24/40 (60%)
Query: 86 QAGVQWHDHSSLQPQPLGLKQFFHLSLPSSWDDRRTPPCP 125
QAGV+ D SLQP P G K+F LSLPSSW P P
Sbjct: 308 QAGVRCRDLDSLQPLPPGFKRFSCLSLPSSWGYSHAPSRP 347
>gi|149588643 zinc finger protein 283 [Homo sapiens]
Length = 679
Score = 42.4 bits (98), Expect = 0.002
Identities = 23/37 (62%), Positives = 23/37 (62%)
Query: 81 SGSVTQAGVQWHDHSSLQPQPLGLKQFFHLSLPSSWD 117
S SV QAGVQW D SLQ P G F LSL SSWD
Sbjct: 3 SRSVAQAGVQWCDLGSLQAPPPGFTLFSCLSLLSSWD 39
>gi|59933284 RUN domain containing 2B [Homo sapiens]
Length = 249
Score = 42.0 bits (97), Expect = 0.002
Identities = 27/91 (29%), Positives = 36/91 (39%), Gaps = 14/91 (15%)
Query: 15 VDDSDDNNDCSIEMVEVSETADNSTNDIADDSTYVTADNPTDDTATQPNFPGGNDGHHRP 74
+D N + + ++V D ++ DD N G H
Sbjct: 173 IDSLSLNREFGYQKLDVKSIDDEDVDENEDD--------------VYGNSSGRKHRGHSE 218
Query: 75 LQMSYGSGSVTQAGVQWHDHSSLQPQPLGLK 105
G+ SVTQAGVQWHD SLQP P G +
Sbjct: 219 SPEKNGAHSVTQAGVQWHDLGSLQPLPPGFR 249
>gi|19743821 integrin beta 1 isoform 1C-2 precursor [Homo sapiens]
Length = 819
Score = 40.4 bits (93), Expect = 0.007
Identities = 20/32 (62%), Positives = 22/32 (68%)
Query: 88 GVQWHDHSSLQPQPLGLKQFFHLSLPSSWDDR 119
GVQW D SSLQP +QF LSLPS+WD R
Sbjct: 779 GVQWCDISSLQPLTSRFQQFSCLSLPSTWDYR 810
>gi|223029500 EF-hand calcium binding domain 5 isoform b [Homo
sapiens]
Length = 856
Score = 40.4 bits (93), Expect = 0.007
Identities = 20/34 (58%), Positives = 23/34 (67%)
Query: 86 QAGVQWHDHSSLQPQPLGLKQFFHLSLPSSWDDR 119
QAGVQW + SSLQP GLK+ H L S+WD R
Sbjct: 810 QAGVQWRNCSSLQPPTPGLKRSSHHRLLSNWDYR 843
>gi|47578099 selenoprotein N, 1 isoform 1 precursor [Homo sapiens]
Length = 590
Score = 40.0 bits (92), Expect = 0.009
Identities = 25/51 (49%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
Query: 80 GSGSVTQAGVQWHDHSSLQPQPLGLKQFFHLSL-----PSSWDDRRTPPCP 125
GS SVTQ GVQW HSSLQPQ L LSL +S ++ PP P
Sbjct: 101 GSCSVTQTGVQWCSHSSLQPQLPWLNUSSCLSLLRSTPAASCEEEELPPDP 151
>gi|7669479 RNA-specific adenosine deaminase B1 isoform 3 [Homo
sapiens]
Length = 714
Score = 40.0 bits (92), Expect = 0.009
Identities = 18/25 (72%), Positives = 20/25 (80%)
Query: 80 GSGSVTQAGVQWHDHSSLQPQPLGL 104
GS S TQAGVQW +H SLQP+P GL
Sbjct: 466 GSRSYTQAGVQWCNHGSLQPRPPGL 490
>gi|7669477 RNA-specific adenosine deaminase B1 isoform 2 [Homo
sapiens]
Length = 741
Score = 40.0 bits (92), Expect = 0.009
Identities = 18/25 (72%), Positives = 20/25 (80%)
Query: 80 GSGSVTQAGVQWHDHSSLQPQPLGL 104
GS S TQAGVQW +H SLQP+P GL
Sbjct: 466 GSRSYTQAGVQWCNHGSLQPRPPGL 490
>gi|239754668 PREDICTED: mucin 12 [Homo sapiens]
Length = 1952
Score = 38.1 bits (87), Expect = 0.032
Identities = 45/225 (20%), Positives = 88/225 (39%), Gaps = 18/225 (8%)
Query: 166 QSSISPPAERQETHAWASPAVTSLESAACHELQEADLSESLSYPRIVSSSSLQQYVAQGG 225
+SS + + T + +SP + H ++ES ++ +S S++ +A
Sbjct: 1289 ESSTTSGRSEESTASHSSPDTNGITPLPAHFTTSGRIAESTTF--YISPGSMETTLASTA 1346
Query: 226 SFPCFGMPWNFISGGAESTNAVISFANATTAVPMAVLSRRESSLANNPGVVNYSALPENE 285
+ P + + S + +S A+ T++ +S +SL + + +A P +
Sbjct: 1347 TTPGLSAKSTILYSSSRSPDQTLSPASMTSSS----ISGEPTSLYSQAESTHTTAFPAST 1402
Query: 286 NVGPGRALSSFCFHPNLEMPERPANSSKNSTETANYPTLMGNYNGQNTASLSVF------ 339
G + S FH E S S T+++ + Q ++LS
Sbjct: 1403 TTS-GLSQESTTFHSKPGSTE--TTLSPGSITTSSFAQEFTTPHSQPGSALSTVSPASTT 1459
Query: 340 IPPYFAEKIILTEMPGTTETNVENNSQTVYYPALSGNTSAPYPAS 384
+P E PG+TET ++S T+ ++ S P+P S
Sbjct: 1460 VPGLSEESTTFYSSPGSTETTAFSHSNTM---SIHSQQSTPFPDS 1501
Score = 30.0 bits (66), Expect = 8.8
Identities = 54/240 (22%), Positives = 86/240 (35%), Gaps = 42/240 (17%)
Query: 164 EVQSSISPPAERQETHAWASPAVT--SLESAACHELQEAD--------------LSESLS 207
E S S P TH S + S ES A H Q+A L ES +
Sbjct: 802 EPTSYHSSPGSTATTHFPDSSTTSGRSEESIASHSSQDATGTIVLPARSTNSVLLGESTT 861
Query: 208 YPRIVSSSSLQQYVAQGGSF-PCFGMPWNFISGGAESTNAVISFANATTAVPMAVLSRRE 266
P +SS S++ G + P S +S A+ T++ +S
Sbjct: 862 SP--ISSGSMETTALPGSTTTPGLSERSTTFHSSPRSPATTLSPASTTSSG----VSEES 915
Query: 267 SSLANNPGVVNYSALPENENVGPGRALSSFCFHPNLEMPERPANSSKNSTETANYP-TLM 325
++ + PG + +A P++ P L ++SS ST+T P +
Sbjct: 916 TTSHSRPGSTHTTAFPDSTTT------------PGLSRHSTTSHSSPGSTDTTLLPASTT 963
Query: 326 GNYNGQNTASLSVFIPPYFAEKIILTEMPGTTETNVENNSQTVYYPALSGNTSAPYPASS 385
G+ T S P + T +PG+T T + T +Y + + PAS+
Sbjct: 964 TXLVGEPTTS------PISSGSTETTALPGSTTTAGLSEKSTTFYSSPRSPDTTLSPAST 1017
>gi|239743293 PREDICTED: mucin 12 [Homo sapiens]
Length = 5478
Score = 38.1 bits (87), Expect = 0.032
Identities = 45/225 (20%), Positives = 88/225 (39%), Gaps = 18/225 (8%)
Query: 166 QSSISPPAERQETHAWASPAVTSLESAACHELQEADLSESLSYPRIVSSSSLQQYVAQGG 225
+SS + + T + +SP + H ++ES ++ +S S++ +A
Sbjct: 4815 ESSTTSGRSEESTASHSSPDTNGITPLPAHFTTSGRIAESTTF--YISPGSMETTLASTA 4872
Query: 226 SFPCFGMPWNFISGGAESTNAVISFANATTAVPMAVLSRRESSLANNPGVVNYSALPENE 285
+ P + + S + +S A+ T++ +S +SL + + +A P +
Sbjct: 4873 TTPGLSAKSTILYSSSRSPDQTLSPASMTSSS----ISGEPTSLYSQAESTHTTAFPAST 4928
Query: 286 NVGPGRALSSFCFHPNLEMPERPANSSKNSTETANYPTLMGNYNGQNTASLSVF------ 339
G + S FH E S S T+++ + Q ++LS
Sbjct: 4929 TTS-GLSQESTTFHSKPGSTE--TTLSPGSITTSSFAQEFTTPHSQPGSALSTVSPASTT 4985
Query: 340 IPPYFAEKIILTEMPGTTETNVENNSQTVYYPALSGNTSAPYPAS 384
+P E PG+TET ++S T+ ++ S P+P S
Sbjct: 4986 VPGLSEESTTFYSSPGSTETTAFSHSNTM---SIHSQQSTPFPDS 5027
Score = 32.7 bits (73), Expect = 1.4
Identities = 54/230 (23%), Positives = 88/230 (38%), Gaps = 23/230 (10%)
Query: 167 SSISPPAERQETHAWASPAVTSLESAACHELQEADLSESLSYPRIVSSSSLQQYVAQGGS 226
SS SP + + T PA T + A + ES +Y R S+ + A +
Sbjct: 2681 SSTSPGLQGESTTFQTHPASTHTTPSP-PSTATAPVEESTTYHRSPGSTPTTHFPASSTT 2739
Query: 227 FPCFGMPWNFISGGAESTNAVISFANATTAVPMAVLS----RRESSLAN-NPGVVNYSAL 281
SG +E + S +A+ P + S R ES+ + +PG + L
Sbjct: 2740 -----------SGHSEKSTIFHSSPDASGTTPSSAHSTTSGRGESTTSRISPGSTEITTL 2788
Query: 282 PENENVGPGRALSSFCFHPNLEMPERPAN-SSKNSTETANYPTLMGNYNGQ--NTASLSV 338
P + PG + +S F+ + P + +S S T + G +T S +
Sbjct: 2789 PGSTTT-PGLSEASTTFYSSPRSPTTTLSPASMTSLGVGEESTTSRSQPGSTHSTVSPAS 2847
Query: 339 FIPPYFAEK--IILTEMPGTTETNVENNSQTVYYPALSGNTSAPYPASSY 386
P +E+ + + PG+TET V S T T PAS++
Sbjct: 2848 TTTPGLSEESTTVYSSSPGSTETTVFPRSTTTSVRGEEPTTFHSRPASTH 2897
Score = 32.3 bits (72), Expect = 1.8
Identities = 54/230 (23%), Positives = 88/230 (38%), Gaps = 23/230 (10%)
Query: 167 SSISPPAERQETHAWASPAVTSLESAACHELQEADLSESLSYPRIVSSSSLQQYVAQGGS 226
SS SP + + T PA T + A + ES +Y R S+ + A +
Sbjct: 3764 SSTSPGLQGESTAFQTHPASTHTTPSP-PSTATAPVEESTTYHRSPGSTPTTHFPASSTT 3822
Query: 227 FPCFGMPWNFISGGAESTNAVISFANATTAVPMAVLS----RRESSLAN-NPGVVNYSAL 281
SG +E + S +A+ P + S R ES+ + +PG + L
Sbjct: 3823 -----------SGHSEKSTIFHSSPDASGTTPSSAHSTTSGRGESTTSRISPGSTEITTL 3871
Query: 282 PENENVGPGRALSSFCFHPNLEMPERPAN-SSKNSTETANYPTLMGNYNGQ--NTASLSV 338
P + PG + +S F+ + P + +S S T + G +T S +
Sbjct: 3872 PGSTTT-PGLSEASTTFYSSPRSPTTTLSPASMTSLGVGEESTTSRSQPGSTHSTVSPAS 3930
Query: 339 FIPPYFAEK--IILTEMPGTTETNVENNSQTVYYPALSGNTSAPYPASSY 386
P +E+ + + PG+TET V S T T PAS++
Sbjct: 3931 TTTPGLSEESTTVYSSSPGSTETTVFPRSTTTSVRREEPTTFHSRPASTH 3980
Score = 31.6 bits (70), Expect = 3.0
Identities = 47/224 (20%), Positives = 84/224 (37%), Gaps = 34/224 (15%)
Query: 167 SSISPPAERQETHAWASPAVTSLESAACHELQEADLSESLSYPRIVSSSSLQQYVAQGGS 226
SS + + T +SP T+ + + ES +Y S+ +
Sbjct: 4514 SSTTLGRSEESTTVHSSPVATATTPSPARSTTSGLVEESTTYHSSPGSTQTMHFPES--- 4570
Query: 227 FPCFGMPWNFISG-GAESTNAVISFANATTAVPM--AVLSRRESSLANNPGVVNYSALPE 283
N SG G EST + S + ++ P + L +S ++PG + P+
Sbjct: 4571 --------NTTSGRGEESTTSHSSTTHTISSAPSTTSALVEEPTSYHSSPGSTATTHFPD 4622
Query: 284 NENVGPGRALSSFCFHPNLEMPERPANSSKNSTETANYP--TLMGNYNGQNTASLSVFIP 341
+ GR+ S H SS+++T T P + G++T S
Sbjct: 4623 SSTTS-GRSEESTASH-----------SSQDATGTIVLPARSTTSVLLGESTTS------ 4664
Query: 342 PYFAEKIILTEMPGTTETNVENNSQTVYYPALSGNTSAPYPASS 385
P + + T +PG+T T + T ++ + S + + ASS
Sbjct: 4665 PISSGSMETTALPGSTTTPGLSEKSTTFHSSPSSTPTTHFSASS 4708
>gi|40789270 zinc finger protein 573 [Homo sapiens]
Length = 607
Score = 37.7 bits (86), Expect = 0.042
Identities = 19/27 (70%), Positives = 19/27 (70%)
Query: 81 SGSVTQAGVQWHDHSSLQPQPLGLKQF 107
S SV QAGVQW D SSLQP P KQF
Sbjct: 3 SCSVAQAGVQWPDLSSLQPPPPRFKQF 29
>gi|89026265 PREDICTED: mucin 12 [Homo sapiens]
Length = 978
Score = 37.4 bits (85), Expect = 0.055
Identities = 45/225 (20%), Positives = 88/225 (39%), Gaps = 18/225 (8%)
Query: 166 QSSISPPAERQETHAWASPAVTSLESAACHELQEADLSESLSYPRIVSSSSLQQYVAQGG 225
+SS + + T + +SP + H ++ES ++ +S S++ +A
Sbjct: 318 ESSTTSGRSEESTASHSSPDTNGITPLPAHFTTSGRIAESTTF--YISPGSMETTLASTT 375
Query: 226 SFPCFGMPWNFISGGAESTNAVISFANATTAVPMAVLSRRESSLANNPGVVNYSALPENE 285
+ P + + S + +S A+ T++ +S +SL + + +A P +
Sbjct: 376 TTPGLSAKSTILYSSSRSPDQTLSPASMTSSS----ISGEPTSLYSQAESTHTTAFPAST 431
Query: 286 NVGPGRALSSFCFHPNLEMPERPANSSKNSTETANYPTLMGNYNGQNTASLSVF------ 339
G + S FH E S S T+++ + Q ++LS
Sbjct: 432 TTS-GLSQESTTFHSKPGSTE--TTLSPGSITTSSFAQEFTTPHSQPGSALSTVSPASTT 488
Query: 340 IPPYFAEKIILTEMPGTTETNVENNSQTVYYPALSGNTSAPYPAS 384
+P E PG+TET ++S T+ ++ S P+P S
Sbjct: 489 VPGLSEESTTFYSSPGSTETTAFSHSNTM---SIHSQQSTPFPDS 530
>gi|56788397 myelin oligodendrocyte glycoprotein isoform beta4
precursor [Homo sapiens]
Length = 171
Score = 37.4 bits (85), Expect = 0.055
Identities = 17/25 (68%), Positives = 18/25 (72%)
Query: 81 SGSVTQAGVQWHDHSSLQPQPLGLK 105
S SVTQ +QWHDH SLQP P LK
Sbjct: 147 SHSVTQDWLQWHDHGSLQPPPPRLK 171
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.128 0.380
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,349,482
Number of Sequences: 37866
Number of extensions: 1564092
Number of successful extensions: 3718
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 3622
Number of HSP's gapped (non-prelim): 118
length of query: 799
length of database: 18,247,518
effective HSP length: 110
effective length of query: 689
effective length of database: 14,082,258
effective search space: 9702675762
effective search space used: 9702675762
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.