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Search of human proteins with 190014595
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|190014595 vestigial like 4 isoform c [Homo sapiens]
(210 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|190014595 vestigial like 4 isoform c [Homo sapiens] 429 e-121
gi|190014597 vestigial like 4 isoform d [Homo sapiens] 420 e-118
gi|190014593 vestigial like 4 isoform a [Homo sapiens] 420 e-118
gi|190014591 vestigial like 4 isoform b [Homo sapiens] 420 e-118
gi|153792074 proline rich 12 [Homo sapiens] 36 0.021
gi|239745977 PREDICTED: hypothetical protein XP_002343631 [Homo ... 34 0.079
gi|40807477 retinoic acid induced 1 [Homo sapiens] 34 0.079
gi|239757609 PREDICTED: hypothetical protein [Homo sapiens] 34 0.10
gi|239752116 PREDICTED: hypothetical protein XP_002348117 [Homo ... 34 0.10
gi|239746618 PREDICTED: hypothetical protein XP_002344233 [Homo ... 34 0.10
gi|115298682 HBxAg transactivated protein 2 [Homo sapiens] 34 0.10
gi|239754911 PREDICTED: hypothetical protein [Homo sapiens] 33 0.13
gi|239749451 PREDICTED: hypothetical protein [Homo sapiens] 33 0.13
gi|239743581 PREDICTED: hypothetical protein [Homo sapiens] 33 0.13
gi|105553088 t-complex 10 [Homo sapiens] 33 0.23
gi|27262667 colony stimulating factor 1 isoform a precursor [Hom... 32 0.30
gi|27262663 colony stimulating factor 1 isoform b precursor [Hom... 32 0.30
gi|27262661 colony stimulating factor 1 isoform a precursor [Hom... 32 0.30
gi|24432032 zinc finger protein 503 [Homo sapiens] 32 0.30
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 32 0.30
gi|148727255 microtubule associated serine/threonine kinase fami... 32 0.39
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 32 0.39
gi|237757310 synaptojanin 1 isoform a [Homo sapiens] 32 0.51
gi|237757308 synaptojanin 1 isoform b [Homo sapiens] 32 0.51
gi|223468602 t-complex 10-like 2 [Homo sapiens] 31 0.67
gi|98985819 interferon regulatory factor 7 isoform d [Homo sapiens] 31 0.67
gi|4758610 interferon regulatory factor 7 isoform a [Homo sapiens] 31 0.67
gi|151301154 mucin 6, gastric [Homo sapiens] 31 0.67
gi|239756104 PREDICTED: tetratricopeptide repeat domain 6 [Homo ... 31 0.87
gi|239750633 PREDICTED: tetratricopeptide repeat domain 6 [Homo ... 31 0.87
>gi|190014595 vestigial like 4 isoform c [Homo sapiens]
Length = 210
Score = 429 bits (1103), Expect = e-121
Identities = 210/210 (100%), Positives = 210/210 (100%)
Query: 1 MIKVRNKTANGDCRRDPRERSRSPIERAVAPTMSLHGSHLYTSLPSLGLEQPLALTKNSL 60
MIKVRNKTANGDCRRDPRERSRSPIERAVAPTMSLHGSHLYTSLPSLGLEQPLALTKNSL
Sbjct: 1 MIKVRNKTANGDCRRDPRERSRSPIERAVAPTMSLHGSHLYTSLPSLGLEQPLALTKNSL 60
Query: 61 DASRPAGLSPTLTPGERQQNRPSVITCASAGARNCNLSHCPIAHSGCAAPGPASYRRPPS 120
DASRPAGLSPTLTPGERQQNRPSVITCASAGARNCNLSHCPIAHSGCAAPGPASYRRPPS
Sbjct: 61 DASRPAGLSPTLTPGERQQNRPSVITCASAGARNCNLSHCPIAHSGCAAPGPASYRRPPS 120
Query: 121 AATTCDPVVEEHFRRSLGKNYKEPEPAPNSVSITGSVDDHFAKALGDTWLQIKAAKDGAS 180
AATTCDPVVEEHFRRSLGKNYKEPEPAPNSVSITGSVDDHFAKALGDTWLQIKAAKDGAS
Sbjct: 121 AATTCDPVVEEHFRRSLGKNYKEPEPAPNSVSITGSVDDHFAKALGDTWLQIKAAKDGAS 180
Query: 181 SSPESASRRGQPASPSAHMVSHSHSPSVVS 210
SSPESASRRGQPASPSAHMVSHSHSPSVVS
Sbjct: 181 SSPESASRRGQPASPSAHMVSHSHSPSVVS 210
>gi|190014597 vestigial like 4 isoform d [Homo sapiens]
Length = 206
Score = 420 bits (1080), Expect = e-118
Identities = 205/205 (100%), Positives = 205/205 (100%)
Query: 6 NKTANGDCRRDPRERSRSPIERAVAPTMSLHGSHLYTSLPSLGLEQPLALTKNSLDASRP 65
NKTANGDCRRDPRERSRSPIERAVAPTMSLHGSHLYTSLPSLGLEQPLALTKNSLDASRP
Sbjct: 2 NKTANGDCRRDPRERSRSPIERAVAPTMSLHGSHLYTSLPSLGLEQPLALTKNSLDASRP 61
Query: 66 AGLSPTLTPGERQQNRPSVITCASAGARNCNLSHCPIAHSGCAAPGPASYRRPPSAATTC 125
AGLSPTLTPGERQQNRPSVITCASAGARNCNLSHCPIAHSGCAAPGPASYRRPPSAATTC
Sbjct: 62 AGLSPTLTPGERQQNRPSVITCASAGARNCNLSHCPIAHSGCAAPGPASYRRPPSAATTC 121
Query: 126 DPVVEEHFRRSLGKNYKEPEPAPNSVSITGSVDDHFAKALGDTWLQIKAAKDGASSSPES 185
DPVVEEHFRRSLGKNYKEPEPAPNSVSITGSVDDHFAKALGDTWLQIKAAKDGASSSPES
Sbjct: 122 DPVVEEHFRRSLGKNYKEPEPAPNSVSITGSVDDHFAKALGDTWLQIKAAKDGASSSPES 181
Query: 186 ASRRGQPASPSAHMVSHSHSPSVVS 210
ASRRGQPASPSAHMVSHSHSPSVVS
Sbjct: 182 ASRRGQPASPSAHMVSHSHSPSVVS 206
>gi|190014593 vestigial like 4 isoform a [Homo sapiens]
Length = 296
Score = 420 bits (1080), Expect = e-118
Identities = 205/205 (100%), Positives = 205/205 (100%)
Query: 6 NKTANGDCRRDPRERSRSPIERAVAPTMSLHGSHLYTSLPSLGLEQPLALTKNSLDASRP 65
NKTANGDCRRDPRERSRSPIERAVAPTMSLHGSHLYTSLPSLGLEQPLALTKNSLDASRP
Sbjct: 92 NKTANGDCRRDPRERSRSPIERAVAPTMSLHGSHLYTSLPSLGLEQPLALTKNSLDASRP 151
Query: 66 AGLSPTLTPGERQQNRPSVITCASAGARNCNLSHCPIAHSGCAAPGPASYRRPPSAATTC 125
AGLSPTLTPGERQQNRPSVITCASAGARNCNLSHCPIAHSGCAAPGPASYRRPPSAATTC
Sbjct: 152 AGLSPTLTPGERQQNRPSVITCASAGARNCNLSHCPIAHSGCAAPGPASYRRPPSAATTC 211
Query: 126 DPVVEEHFRRSLGKNYKEPEPAPNSVSITGSVDDHFAKALGDTWLQIKAAKDGASSSPES 185
DPVVEEHFRRSLGKNYKEPEPAPNSVSITGSVDDHFAKALGDTWLQIKAAKDGASSSPES
Sbjct: 212 DPVVEEHFRRSLGKNYKEPEPAPNSVSITGSVDDHFAKALGDTWLQIKAAKDGASSSPES 271
Query: 186 ASRRGQPASPSAHMVSHSHSPSVVS 210
ASRRGQPASPSAHMVSHSHSPSVVS
Sbjct: 272 ASRRGQPASPSAHMVSHSHSPSVVS 296
>gi|190014591 vestigial like 4 isoform b [Homo sapiens]
Length = 290
Score = 420 bits (1080), Expect = e-118
Identities = 205/205 (100%), Positives = 205/205 (100%)
Query: 6 NKTANGDCRRDPRERSRSPIERAVAPTMSLHGSHLYTSLPSLGLEQPLALTKNSLDASRP 65
NKTANGDCRRDPRERSRSPIERAVAPTMSLHGSHLYTSLPSLGLEQPLALTKNSLDASRP
Sbjct: 86 NKTANGDCRRDPRERSRSPIERAVAPTMSLHGSHLYTSLPSLGLEQPLALTKNSLDASRP 145
Query: 66 AGLSPTLTPGERQQNRPSVITCASAGARNCNLSHCPIAHSGCAAPGPASYRRPPSAATTC 125
AGLSPTLTPGERQQNRPSVITCASAGARNCNLSHCPIAHSGCAAPGPASYRRPPSAATTC
Sbjct: 146 AGLSPTLTPGERQQNRPSVITCASAGARNCNLSHCPIAHSGCAAPGPASYRRPPSAATTC 205
Query: 126 DPVVEEHFRRSLGKNYKEPEPAPNSVSITGSVDDHFAKALGDTWLQIKAAKDGASSSPES 185
DPVVEEHFRRSLGKNYKEPEPAPNSVSITGSVDDHFAKALGDTWLQIKAAKDGASSSPES
Sbjct: 206 DPVVEEHFRRSLGKNYKEPEPAPNSVSITGSVDDHFAKALGDTWLQIKAAKDGASSSPES 265
Query: 186 ASRRGQPASPSAHMVSHSHSPSVVS 210
ASRRGQPASPSAHMVSHSHSPSVVS
Sbjct: 266 ASRRGQPASPSAHMVSHSHSPSVVS 290
>gi|153792074 proline rich 12 [Homo sapiens]
Length = 2036
Score = 36.2 bits (82), Expect = 0.021
Identities = 33/118 (27%), Positives = 50/118 (42%), Gaps = 10/118 (8%)
Query: 80 NRPSVITCASAGARNCNLSHCPIAHSGCAAPGPASYRRPPSAATTCDPVVEEHFRRSLGK 139
+RP V S A+N P++ G +AP P + PP T E+ ++
Sbjct: 1668 HRPPVPVRRSGQAKN------PVSAGGSSAPPPKAPAPPPKPETPEKTTSEKPPEQTPET 1721
Query: 140 NYKEPEPAPNSVSITGSVDDHFAK---ALGDTWLQIKAAKDGASSSPESASRRGQPAS 194
EP PAP S+ V+ K G+ L+ + A G + PE + GQPA+
Sbjct: 1722 AMPEP-PAPEKPSLLRPVEKEKEKEKVTRGERPLRGERATSGRQTRPERSLATGQPAT 1778
>gi|239745977 PREDICTED: hypothetical protein XP_002343631 [Homo
sapiens]
Length = 177
Score = 34.3 bits (77), Expect = 0.079
Identities = 30/107 (28%), Positives = 40/107 (37%), Gaps = 27/107 (25%)
Query: 21 SRSPIERAVAPTMSLHG--------SHLYTSLPSLGLEQPLALTKNSLDASRPAGLSPTL 72
+ S RAV P +S+ G SHLY+ L RP +S T+
Sbjct: 68 AHSSCRRAVRPGLSVAGKASAPRPASHLYSKL-------------------RPRLVSVTV 108
Query: 73 TPGERQQNRPSVITCASAGARNCNLSHCPIAHSGCAAPGPASYRRPP 119
+ +PS C+S+G S G AAPGP PP
Sbjct: 109 STSSPSAWKPSPANCSSSGKDEAAASSTTPPSMGPAAPGPGPTPPPP 155
>gi|40807477 retinoic acid induced 1 [Homo sapiens]
Length = 1906
Score = 34.3 bits (77), Expect = 0.079
Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 12/93 (12%)
Query: 114 SYRRPPSAATTCDPVVEEHFRRSLGKNYKEPEPAPNSVSITGSVDDHFAKALGDTWLQIK 173
+YR+P A +CD +R L K+Y P+P P+ G+ A D + +
Sbjct: 29 NYRQPSQAGLSCDR------QRLLAKDYYNPQPYPSYEGGAGTPSGTAAAVAADKYHR-- 80
Query: 174 AAKDGASSSPESASRRGQPASPSAHMVSHSHSP 206
G+ + P +G+PA P + S P
Sbjct: 81 ----GSKALPTQQGLQGRPAFPGYGVQDSSPYP 109
>gi|239757609 PREDICTED: hypothetical protein [Homo sapiens]
Length = 571
Score = 33.9 bits (76), Expect = 0.10
Identities = 28/101 (27%), Positives = 43/101 (42%), Gaps = 15/101 (14%)
Query: 38 SHLYT--SLPSLGLEQPLALTKNSLDASRPAGLSPTLTPGERQQNRPSVITCASAGARNC 95
SH T + P G E+P ++ ++ +A RP+ L + PG R Q+R A + C
Sbjct: 188 SHTLTPAAQPPRGPEKPTSV--HAEEALRPSRLHQAVDPGSRGQSRSKCAAGLPAASMPC 245
Query: 96 NLSHCPI-------AHSGCAAPG----PASYRRPPSAATTC 125
+ H P AH+ C G P+ R P + C
Sbjct: 246 SRGHIPADQIPSPQAHARCLETGGKGAPSLPRAPLPSTLAC 286
>gi|239752116 PREDICTED: hypothetical protein XP_002348117 [Homo
sapiens]
Length = 571
Score = 33.9 bits (76), Expect = 0.10
Identities = 28/101 (27%), Positives = 43/101 (42%), Gaps = 15/101 (14%)
Query: 38 SHLYT--SLPSLGLEQPLALTKNSLDASRPAGLSPTLTPGERQQNRPSVITCASAGARNC 95
SH T + P G E+P ++ ++ +A RP+ L + PG R Q+R A + C
Sbjct: 188 SHTLTPAAQPPRGPEKPTSV--HAEEALRPSRLHQAVDPGSRGQSRSKCAAGLPAASMPC 245
Query: 96 NLSHCPI-------AHSGCAAPG----PASYRRPPSAATTC 125
+ H P AH+ C G P+ R P + C
Sbjct: 246 SRGHIPADQIPSPQAHARCLETGGKGAPSLPRAPLPSTLAC 286
>gi|239746618 PREDICTED: hypothetical protein XP_002344233 [Homo
sapiens]
Length = 571
Score = 33.9 bits (76), Expect = 0.10
Identities = 28/101 (27%), Positives = 43/101 (42%), Gaps = 15/101 (14%)
Query: 38 SHLYT--SLPSLGLEQPLALTKNSLDASRPAGLSPTLTPGERQQNRPSVITCASAGARNC 95
SH T + P G E+P ++ ++ +A RP+ L + PG R Q+R A + C
Sbjct: 188 SHTLTPAAQPPRGPEKPTSV--HAEEALRPSRLHQAVDPGSRGQSRSKCAAGLPAASMPC 245
Query: 96 NLSHCPI-------AHSGCAAPG----PASYRRPPSAATTC 125
+ H P AH+ C G P+ R P + C
Sbjct: 246 SRGHIPADQIPSPQAHARCLETGGKGAPSLPRAPLPSTLAC 286
>gi|115298682 HBxAg transactivated protein 2 [Homo sapiens]
Length = 2817
Score = 33.9 bits (76), Expect = 0.10
Identities = 48/196 (24%), Positives = 73/196 (37%), Gaps = 15/196 (7%)
Query: 1 MIKVRNKTANGDCRRDPRERSRSPIERAVAPTMSLHGSHLYTSLPSLGLEQPLALTKNSL 60
+I+V NK + R + S+ P A + + S+P L T S+
Sbjct: 1705 VIQVWNKKNANEKGRS--QTSKLPPRFAKKQATGIQQAQSSASVPPLASAPLPPSTSASV 1762
Query: 61 DASRPAGLSPTLTPGERQQNRPSVITCASAGARNCNLSHCPIAHSGCAAPGPASYRRPPS 120
AS A L TLTP + P + + P+ S +AP PAS P S
Sbjct: 1763 PASTSAPLPATLTPVPASTSAPVPASTLA-----------PVLAS-TSAPVPASPLAPVS 1810
Query: 121 AATTCDPVVEEHFRRSLGKNYKEPEPAPNSVSITGSVDDHFA-KALGDTWLQIKAAKDGA 179
A+ + V + + P AP I SV + L + I A+ +
Sbjct: 1811 ASASVSASVPASTSAAAITSSSAPASAPAPTPILASVSTPASVTILASASIPILASALAS 1870
Query: 180 SSSPESASRRGQPASP 195
+S+P A PA+P
Sbjct: 1871 TSAPTPAPAASSPAAP 1886
>gi|239754911 PREDICTED: hypothetical protein [Homo sapiens]
Length = 297
Score = 33.5 bits (75), Expect = 0.13
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 52 PLALTKNSLDASRPAGLSPTLTPGERQQNRPSVITCASAGARNCNLSHCPIAHSGCAAPG 111
PL+ + D +R G +P ++PG ++ + S GAR+ + S P + A G
Sbjct: 24 PLSNSSQRADPARRPG-APWVSPGCSPESLRAAPLPGSLGARSRSHSGPPATAAAARASG 82
Query: 112 PASYRRPPSAATTC 125
A R P SAAT C
Sbjct: 83 HAHGRWPRSAATAC 96
>gi|239749451 PREDICTED: hypothetical protein [Homo sapiens]
Length = 297
Score = 33.5 bits (75), Expect = 0.13
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 52 PLALTKNSLDASRPAGLSPTLTPGERQQNRPSVITCASAGARNCNLSHCPIAHSGCAAPG 111
PL+ + D +R G +P ++PG ++ + S GAR+ + S P + A G
Sbjct: 24 PLSNSSQRADPARRPG-APWVSPGCSPESLRAAPLPGSLGARSRSHSGPPATAAAARASG 82
Query: 112 PASYRRPPSAATTC 125
A R P SAAT C
Sbjct: 83 HAHGRWPRSAATAC 96
>gi|239743581 PREDICTED: hypothetical protein [Homo sapiens]
Length = 297
Score = 33.5 bits (75), Expect = 0.13
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 52 PLALTKNSLDASRPAGLSPTLTPGERQQNRPSVITCASAGARNCNLSHCPIAHSGCAAPG 111
PL+ + D +R G +P ++PG ++ + S GAR+ + S P + A G
Sbjct: 24 PLSNSSQRADPARRPG-APWVSPGCSPESLRAAPLPGSLGARSRSHSGPPATAAAARASG 82
Query: 112 PASYRRPPSAATTC 125
A R P SAAT C
Sbjct: 83 HAHGRWPRSAATAC 96
>gi|105553088 t-complex 10 [Homo sapiens]
Length = 326
Score = 32.7 bits (73), Expect = 0.23
Identities = 31/127 (24%), Positives = 50/127 (39%), Gaps = 18/127 (14%)
Query: 74 PGERQQNRPSVITCASAGARNCNLSHC-PIAHSGCAAPGPASYRRPPSAATTCDPVVEEH 132
PG RQ P+ + GA +S I H +P + R+ P A+ + E+
Sbjct: 164 PGRRQDRSPAPTGRPTPGAERRGVSEDGKIMHPSSRSPQNSGGRKSPVQASQATTLQEQT 223
Query: 133 FRRSLGKNYKEPEPAPNSVSITGSVDDHFAKALGDTWLQIKAAKDGASSSPESASRRGQP 192
A S S+ GS + F + A + ASS+P+SA R+ P
Sbjct: 224 ---------AAARGADRSSSVLGSSEGGFLSRV--------QADEFASSAPDSAERQNLP 266
Query: 193 ASPSAHM 199
+P + +
Sbjct: 267 VNPPSSL 273
>gi|27262667 colony stimulating factor 1 isoform a precursor [Homo
sapiens]
Length = 554
Score = 32.3 bits (72), Expect = 0.30
Identities = 26/110 (23%), Positives = 47/110 (42%), Gaps = 15/110 (13%)
Query: 110 PGPASYRRPPSAATTCDPVVEEHFRRS-LGKNYKEPEPAPNSVSITGSVDDHFAKALGDT 168
PG A R P S + +P + S +G + P+P P+ + ++D A+G
Sbjct: 246 PGSAKQRPPRSTCQSFEPPETPVVKDSTIGGS---PQPRPSVGAFNPGMEDILDSAMGTN 302
Query: 169 WLQIKAAKDGAS-----------SSPESASRRGQPASPSAHMVSHSHSPS 207
W+ +A+ + + S P S + +PA PS + + S P+
Sbjct: 303 WVPEEASGEASEIPVPQGTELSPSRPGGGSMQTEPARPSNFLSASSPLPA 352
>gi|27262663 colony stimulating factor 1 isoform b precursor [Homo
sapiens]
Length = 438
Score = 32.3 bits (72), Expect = 0.30
Identities = 26/110 (23%), Positives = 47/110 (42%), Gaps = 15/110 (13%)
Query: 110 PGPASYRRPPSAATTCDPVVEEHFRRS-LGKNYKEPEPAPNSVSITGSVDDHFAKALGDT 168
PG A R P S + +P + S +G + P+P P+ + ++D A+G
Sbjct: 246 PGSAKQRPPRSTCQSFEPPETPVVKDSTIGGS---PQPRPSVGAFNPGMEDILDSAMGTN 302
Query: 169 WLQIKAAKDGAS-----------SSPESASRRGQPASPSAHMVSHSHSPS 207
W+ +A+ + + S P S + +PA PS + + S P+
Sbjct: 303 WVPEEASGEASEIPVPQGTELSPSRPGGGSMQTEPARPSNFLSASSPLPA 352
>gi|27262661 colony stimulating factor 1 isoform a precursor [Homo
sapiens]
Length = 554
Score = 32.3 bits (72), Expect = 0.30
Identities = 26/110 (23%), Positives = 47/110 (42%), Gaps = 15/110 (13%)
Query: 110 PGPASYRRPPSAATTCDPVVEEHFRRS-LGKNYKEPEPAPNSVSITGSVDDHFAKALGDT 168
PG A R P S + +P + S +G + P+P P+ + ++D A+G
Sbjct: 246 PGSAKQRPPRSTCQSFEPPETPVVKDSTIGGS---PQPRPSVGAFNPGMEDILDSAMGTN 302
Query: 169 WLQIKAAKDGAS-----------SSPESASRRGQPASPSAHMVSHSHSPS 207
W+ +A+ + + S P S + +PA PS + + S P+
Sbjct: 303 WVPEEASGEASEIPVPQGTELSPSRPGGGSMQTEPARPSNFLSASSPLPA 352
>gi|24432032 zinc finger protein 503 [Homo sapiens]
Length = 646
Score = 32.3 bits (72), Expect = 0.30
Identities = 30/93 (32%), Positives = 37/93 (39%), Gaps = 6/93 (6%)
Query: 31 PTMSLHGSHLYTSLP-SLGLEQPLALTKNSLDASRPAGLSPTLTPGERQQNRPSVITCAS 89
P HG L + P SL Q A SL S+PAG SP PSV+T +
Sbjct: 372 PQFLPHGVALDPTKPGSLVGAQLAAAAAGSLGCSKPAGSSPLAGASP-----PSVMTASL 426
Query: 90 AGARNCNLSHCPIAHSGCAAPGPASYRRPPSAA 122
C HC +G AA + P +AA
Sbjct: 427 CRDPYCLSYHCASHLAGAAAASASCAHDPAAAA 459
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 32.3 bits (72), Expect = 0.30
Identities = 44/199 (22%), Positives = 78/199 (39%), Gaps = 10/199 (5%)
Query: 17 PRERSRSPIERAVAPTMSLHGSHL-YTSLPSLGL-EQPLALTKNSLDASRPAGLSPTLTP 74
P S+S AVA T S G H S+P+ G+ + S A +P+ L+
Sbjct: 2468 PVAGSQSLSSGAVATTTSSAGDHNGMLSVPAPGVPHSDVGEPPASTGAQQPSALAALQPA 2527
Query: 75 GERQQNRPSVITCASAGARNCNLSHCPIAHSGCAAPGPASYRRPPSAATTCDPVVEEHFR 134
ER+ + S + +S+ + + + S + S + +S P A P +
Sbjct: 2528 KERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLPVQPEVALKRVPSPTPAPK 2587
Query: 135 RSLGKNYKEPEPAP-------NSVSITGSVDDHFAKALGDTWLQIKAAKDGASSSPESAS 187
++ + + PEP P +S S + S + + + ++ +SSS S+S
Sbjct: 2588 EAVREG-RPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2646
Query: 188 RRGQPASPSAHMVSHSHSP 206
PA P + SP
Sbjct: 2647 SSPSPAKPGPQALPKPASP 2665
>gi|148727255 microtubule associated serine/threonine kinase family
member 4 isoform a [Homo sapiens]
Length = 2434
Score = 32.0 bits (71), Expect = 0.39
Identities = 48/215 (22%), Positives = 74/215 (34%), Gaps = 31/215 (14%)
Query: 3 KVRNKTANGDCRRDPRERSR------------SPIERAVAPTMSLHGSHLYTSLPSLGLE 50
K +K G+ R PR+ S + R V P + SL G+E
Sbjct: 1852 KTNHKDGPGEARPPPRDNSSLHSAGIPCEKELGKVRRGVEPKPEALLAR--RSLQPPGIE 1909
Query: 51 QPLALTKNSLDASRPAGLSPTLTPGERQQNRPSVITCASAGARNCNLSHCPIAHSGCAAP 110
+ +S + + G + Q PS I A++ + P A C++P
Sbjct: 1910 SEKSEKLSSFPSLQKDGAKEPERKEQPLQRHPSSIPPPPLTAKDLS---SPAARQHCSSP 1966
Query: 111 GPASYRRPPSAATTCDP---------VVEEHFRRSLGKNYKEPEPAPNSVSITGSVDDHF 161
AS R P + +T +P V H S K P+P P
Sbjct: 1967 SHASGREPGAKPSTAEPSSSPQDPPKPVAAHSESSSHKPRPGPDPGPPKTKHPDRSLSSQ 2026
Query: 162 AKALGDTWLQIKAAKDGASSSPESASRRGQPASPS 196
++G T K+ A+ S +SR G+ S S
Sbjct: 2027 KPSVGAT-----KGKEPATQSLGGSSREGKGHSKS 2056
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 32.0 bits (71), Expect = 0.39
Identities = 50/209 (23%), Positives = 78/209 (37%), Gaps = 37/209 (17%)
Query: 20 RSRSPIERAVAPTMSLHGSHLYTSLPSLGLEQPLALTKNSLDASRPAGLSPTLTPGERQQ 79
RSRSP+ R + SL GS +S + S + LSP+ +P R++
Sbjct: 340 RSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTSSPPRKTRRLSPSASP-PRRR 398
Query: 80 NRPSVITCASAGARNCNLSHCPIAHSGCAAPGPASYRRPPSAATTCDP-----VVEEHFR 134
+RPS R+ +P P R + + P V +H +
Sbjct: 399 HRPSPPATPPPKTRH--------------SPTPQQSNRTRKSRVSVSPGRTSGKVTKH-K 443
Query: 135 RSLGKNYKEPEPAPNSVSITGSVDDHFAK-ALGDTWLQIK---------AAKDGASSSPE 184
+ + P P P V ++ S +D K A D+ Q + ++ G+SSS E
Sbjct: 444 GTEKRESPSPAPKPRKVELSESEEDKGGKMAAADSVQQRRQYRRQNQQSSSDSGSSSSSE 503
Query: 185 ------SASRRGQPASPSAHMVSHSHSPS 207
S + G+ H S S SPS
Sbjct: 504 DERPKRSHVKNGEVGRRRRHSPSRSASPS 532
>gi|237757310 synaptojanin 1 isoform a [Homo sapiens]
Length = 1612
Score = 31.6 bits (70), Expect = 0.51
Identities = 50/190 (26%), Positives = 66/190 (34%), Gaps = 32/190 (16%)
Query: 17 PRERSRSPIERAVAPTMSLHGSHLYTSLPSLGLEQPLALTKNSLDASRPAGLSPTLTPGE 76
P E R P R VAP + P G P K G+ +PG
Sbjct: 1141 PLEPKRPPPPRPVAPPT--RPAPPQRPPPPSGARSPAPTRKEF------GGIGAPPSPGV 1192
Query: 77 RQQNRPSVITCASAGARNCNLSHCPIAHSGCAAPGPASYRR-----PPSAATTCDPVVEE 131
++ + + + N S P +G A PGPA Y PP A P +
Sbjct: 1193 ARREMEAPKSPGTTRKDNIGRSQ-PSPQAGLAGPGPAGYSTARPTIPPRAGVISAP--QS 1249
Query: 132 HFRRSLGKNYKEPEPAPNSVSITGSVDDHFAKALGDTW----LQIKAAKDGASSSPESAS 187
H R S G+ P S S T + G T+ L+ +AA SS P A
Sbjct: 1250 HARASAGR------LTPESQSKTSET------SKGSTFLPEPLKPQAAFPPQSSLPPPAQ 1297
Query: 188 RRGQPASPSA 197
R +P P A
Sbjct: 1298 RLQEPLVPVA 1307
>gi|237757308 synaptojanin 1 isoform b [Homo sapiens]
Length = 1350
Score = 31.6 bits (70), Expect = 0.51
Identities = 50/190 (26%), Positives = 66/190 (34%), Gaps = 32/190 (16%)
Query: 17 PRERSRSPIERAVAPTMSLHGSHLYTSLPSLGLEQPLALTKNSLDASRPAGLSPTLTPGE 76
P E R P R VAP + P G P K G+ +PG
Sbjct: 1141 PLEPKRPPPPRPVAPPT--RPAPPQRPPPPSGARSPAPTRKEF------GGIGAPPSPGV 1192
Query: 77 RQQNRPSVITCASAGARNCNLSHCPIAHSGCAAPGPASYRR-----PPSAATTCDPVVEE 131
++ + + + N S P +G A PGPA Y PP A P +
Sbjct: 1193 ARREMEAPKSPGTTRKDNIGRSQ-PSPQAGLAGPGPAGYSTARPTIPPRAGVISAP--QS 1249
Query: 132 HFRRSLGKNYKEPEPAPNSVSITGSVDDHFAKALGDTW----LQIKAAKDGASSSPESAS 187
H R S G+ P S S T + G T+ L+ +AA SS P A
Sbjct: 1250 HARASAGR------LTPESQSKTSET------SKGSTFLPEPLKPQAAFPPQSSLPPPAQ 1297
Query: 188 RRGQPASPSA 197
R +P P A
Sbjct: 1298 RLQEPLVPVA 1307
>gi|223468602 t-complex 10-like 2 [Homo sapiens]
Length = 353
Score = 31.2 bits (69), Expect = 0.67
Identities = 31/127 (24%), Positives = 51/127 (40%), Gaps = 18/127 (14%)
Query: 74 PGERQQNRPSVITCASAGARNCNLSHC-PIAHSGCAAPGPASYRRPPSAATTCDPVVEEH 132
PG RQ P+ + GA +S I H + + R+ P A+ + E+
Sbjct: 191 PGRRQDRSPAPTGRPTPGAERREVSEDGKIMHPSSRSLQNSGGRKSPVQASQAATLQEQT 250
Query: 133 FRRSLGKNYKEPEPAPNSVSITGSVDDHFAKALGDTWLQIKAAKDGASSSPESASRRGQP 192
+ A S S+ GS + F + A++ ASSSP+SA R+ P
Sbjct: 251 AAAGV---------ADRSSSVLGSSEGGFLSRV--------QAEEFASSSPDSAERQNLP 293
Query: 193 ASPSAHM 199
+P + +
Sbjct: 294 VNPPSSL 300
>gi|98985819 interferon regulatory factor 7 isoform d [Homo sapiens]
Length = 516
Score = 31.2 bits (69), Expect = 0.67
Identities = 28/105 (26%), Positives = 39/105 (37%), Gaps = 1/105 (0%)
Query: 51 QPLALTKNSLDASRPAGLSPTLTPGERQQNRPSVITCASA-GARNCNLSHCPIAHSGCAA 109
Q L + L AS A PT PGE Q+ P CA G L + +
Sbjct: 201 QQSCLADHLLTASWGADPVPTKAPGEGQEGLPLTGACAGGPGLPAGELYGWAVETTPSPG 260
Query: 110 PGPASYRRPPSAATTCDPVVEEHFRRSLGKNYKEPEPAPNSVSIT 154
P PA+ +AA E + S EP+P ++ +T
Sbjct: 261 PQPAALTTGEAAAPESPHQAEPYLSPSPSACTAVQEPSPGALDVT 305
>gi|4758610 interferon regulatory factor 7 isoform a [Homo sapiens]
Length = 503
Score = 31.2 bits (69), Expect = 0.67
Identities = 28/105 (26%), Positives = 39/105 (37%), Gaps = 1/105 (0%)
Query: 51 QPLALTKNSLDASRPAGLSPTLTPGERQQNRPSVITCASA-GARNCNLSHCPIAHSGCAA 109
Q L + L AS A PT PGE Q+ P CA G L + +
Sbjct: 188 QQSCLADHLLTASWGADPVPTKAPGEGQEGLPLTGACAGGPGLPAGELYGWAVETTPSPG 247
Query: 110 PGPASYRRPPSAATTCDPVVEEHFRRSLGKNYKEPEPAPNSVSIT 154
P PA+ +AA E + S EP+P ++ +T
Sbjct: 248 PQPAALTTGEAAAPESPHQAEPYLSPSPSACTAVQEPSPGALDVT 292
>gi|151301154 mucin 6, gastric [Homo sapiens]
Length = 2439
Score = 31.2 bits (69), Expect = 0.67
Identities = 28/107 (26%), Positives = 36/107 (33%), Gaps = 6/107 (5%)
Query: 51 QPLALTKNSLDASRPAGLSPTLTPGERQQNRPSVITCASAGARNCNLSHCPIAHSGCAAP 110
Q T +L +G SPTL P Q P + G R P + +G P
Sbjct: 1322 QSTTRTTMTLPTPATSGTSPTL-PKSTNQELPGTTATQTTGPRPT-----PASTTGPTTP 1375
Query: 111 GPASYRRPPSAATTCDPVVEEHFRRSLGKNYKEPEPAPNSVSITGSV 157
P RP + TT E+ P A + V TG V
Sbjct: 1376 QPGQPTRPTATETTQTRTTTEYTTPQTPHTTHSPPTAGSPVPSTGPV 1422
>gi|239756104 PREDICTED: tetratricopeptide repeat domain 6 [Homo
sapiens]
Length = 1614
Score = 30.8 bits (68), Expect = 0.87
Identities = 34/134 (25%), Positives = 48/134 (35%), Gaps = 19/134 (14%)
Query: 3 KVRNKTANGDCRRDPRERSRSPIERAVAPTMSLHG----------------SHLYTSLPS 46
KVR +T R + S+ ++ + P SLH S Y SL
Sbjct: 24 KVRQETKKDFLRFKQKLASKPAVDES--PVHSLHAPGPARPARVSCAAARTSRRYPSLKG 81
Query: 47 LGLEQPLALTKNSLDASRPAGLSPTLTPGERQQNRP-SVITCASAGARNCNLSHCPIAHS 105
+ L + A RP+GL PG+ + RP +SA R+ L P+ S
Sbjct: 82 PAMSAAALLQEVLGGAPRPSGLGEAAAPGKTRSFRPRDFYLRSSAFLRHQALKKPPVIAS 141
Query: 106 GCAAPGPASYRRPP 119
G P PP
Sbjct: 142 GFGTARPVVLLPPP 155
>gi|239750633 PREDICTED: tetratricopeptide repeat domain 6 [Homo
sapiens]
Length = 1614
Score = 30.8 bits (68), Expect = 0.87
Identities = 34/134 (25%), Positives = 48/134 (35%), Gaps = 19/134 (14%)
Query: 3 KVRNKTANGDCRRDPRERSRSPIERAVAPTMSLHG----------------SHLYTSLPS 46
KVR +T R + S+ ++ + P SLH S Y SL
Sbjct: 24 KVRQETKKDFLRFKQKLASKPAVDES--PVHSLHAPGPARPARVSCAAARTSRRYPSLKG 81
Query: 47 LGLEQPLALTKNSLDASRPAGLSPTLTPGERQQNRP-SVITCASAGARNCNLSHCPIAHS 105
+ L + A RP+GL PG+ + RP +SA R+ L P+ S
Sbjct: 82 PAMSAAALLQEVLGGAPRPSGLGEAAAPGKTRSFRPRDFYLRSSAFLRHQALKKPPVIAS 141
Query: 106 GCAAPGPASYRRPP 119
G P PP
Sbjct: 142 GFGTARPVVLLPPP 155
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.125 0.375
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,135,641
Number of Sequences: 37866
Number of extensions: 549078
Number of successful extensions: 1729
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 83
Number of HSP's that attempted gapping in prelim test: 1652
Number of HSP's gapped (non-prelim): 163
length of query: 210
length of database: 18,247,518
effective HSP length: 98
effective length of query: 112
effective length of database: 14,536,650
effective search space: 1628104800
effective search space used: 1628104800
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.