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Search of human proteins with 188528696
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|188528696 erlectin isoform 2 [Homo sapiens]
(457 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|188528696 erlectin isoform 2 [Homo sapiens] 955 0.0
gi|20070264 erlectin isoform 1 [Homo sapiens] 941 0.0
gi|188528698 erlectin isoform 3 [Homo sapiens] 688 0.0
gi|63252870 osteosarcoma amplified 9 isoform 4 precursor [Homo s... 96 7e-20
gi|63252868 osteosarcoma amplified 9 isoform 3 precursor [Homo s... 96 7e-20
gi|63252866 osteosarcoma amplified 9 isoform 2 precursor [Homo s... 96 7e-20
gi|5803109 osteosarcoma amplified 9 isoform 1 precursor [Homo sa... 96 7e-20
gi|14249738 N-acetylglucosamine-1-phosphotransferase, gamma subu... 40 0.006
gi|226246554 hypothetical protein LOC643677 [Homo sapiens] 35 0.18
gi|239756039 PREDICTED: hypothetical protein LOC643677 [Homo sap... 35 0.18
gi|239750569 PREDICTED: hypothetical protein LOC643677 [Homo sap... 35 0.18
gi|239744870 PREDICTED: hypothetical protein LOC643677 [Homo sap... 35 0.18
gi|48255891 protein kinase C substrate 80K-H isoform 2 [Homo sap... 33 0.41
gi|48255889 protein kinase C substrate 80K-H isoform 1 [Homo sap... 33 0.41
gi|114431236 zinc finger protein 462 [Homo sapiens] 33 0.70
gi|14249340 phospholipase C, delta 4 [Homo sapiens] 32 1.2
gi|239753102 PREDICTED: hypothetical protein [Homo sapiens] 31 2.7
gi|221136848 neuroblastoma breakpoint family, member 6 isoform 2... 30 5.9
gi|221136844 neuroblastoma breakpoint family, member 6 isoform 1... 30 5.9
gi|221218991 neuroblastoma breakpoint family, member 4 [Homo sap... 30 5.9
gi|73427803 lethal giant larvae homolog 2 isoform c [Homo sapiens] 30 5.9
gi|48762732 phosphodiesterase 9A isoform h [Homo sapiens] 30 5.9
gi|62739163 lethal giant larvae homolog 2 isoform b [Homo sapiens] 30 5.9
gi|62739161 lethal giant larvae homolog 2 isoform a [Homo sapiens] 30 5.9
gi|28395045 Bardet-Biedl syndrome 1 [Homo sapiens] 30 5.9
gi|18375528 UPF3 regulator of nonsense transcripts homolog B iso... 30 5.9
gi|47419911 transcriptional intermediary factor 1 alpha isoform ... 30 5.9
gi|47419909 transcriptional intermediary factor 1 alpha isoform ... 30 5.9
gi|16933557 dachsous 1 precursor [Homo sapiens] 30 5.9
gi|90903231 huntingtin [Homo sapiens] 29 7.8
>gi|188528696 erlectin isoform 2 [Homo sapiens]
Length = 457
Score = 955 bits (2469), Expect = 0.0
Identities = 457/457 (100%), Positives = 457/457 (100%)
Query: 1 MEEGGGGVRSLVPGGPVLLVLCGLLEASGGGRALPQLSDDIPFRVNWPGTEFSLPTTGVL 60
MEEGGGGVRSLVPGGPVLLVLCGLLEASGGGRALPQLSDDIPFRVNWPGTEFSLPTTGVL
Sbjct: 1 MEEGGGGVRSLVPGGPVLLVLCGLLEASGGGRALPQLSDDIPFRVNWPGTEFSLPTTGVL 60
Query: 61 YKEDNYVIMTTAHKEKYKCILPLVTSGDEEEEKDYKGPNPRELLEPLFKQSSCSYRIESY 120
YKEDNYVIMTTAHKEKYKCILPLVTSGDEEEEKDYKGPNPRELLEPLFKQSSCSYRIESY
Sbjct: 61 YKEDNYVIMTTAHKEKYKCILPLVTSGDEEEEKDYKGPNPRELLEPLFKQSSCSYRIESY 120
Query: 121 WTYEVCHGKHIRQYHEEKETGQKINIHEYYLGNMLAKNLLFEKEREAEEKEKSNEIPTKN 180
WTYEVCHGKHIRQYHEEKETGQKINIHEYYLGNMLAKNLLFEKEREAEEKEKSNEIPTKN
Sbjct: 121 WTYEVCHGKHIRQYHEEKETGQKINIHEYYLGNMLAKNLLFEKEREAEEKEKSNEIPTKN 180
Query: 181 IEGQMTPYYPVGMGNGTPCSLKQNRPRSSTVMYICHPESKHEILSVAEVTTCEYEVVILT 240
IEGQMTPYYPVGMGNGTPCSLKQNRPRSSTVMYICHPESKHEILSVAEVTTCEYEVVILT
Sbjct: 181 IEGQMTPYYPVGMGNGTPCSLKQNRPRSSTVMYICHPESKHEILSVAEVTTCEYEVVILT 240
Query: 241 PLLCSHPKYRFRASPVNDIFCQSLPGSPFKPLTLRQLEQQEEILRVPFRRNKEEDLQSTK 300
PLLCSHPKYRFRASPVNDIFCQSLPGSPFKPLTLRQLEQQEEILRVPFRRNKEEDLQSTK
Sbjct: 241 PLLCSHPKYRFRASPVNDIFCQSLPGSPFKPLTLRQLEQQEEILRVPFRRNKEEDLQSTK 300
Query: 301 EERFPAIHKSIAIGSQPVLTVGTTHISKLTDDQLIKEFLSGSYCFRGGVGWWKYEFCYGK 360
EERFPAIHKSIAIGSQPVLTVGTTHISKLTDDQLIKEFLSGSYCFRGGVGWWKYEFCYGK
Sbjct: 301 EERFPAIHKSIAIGSQPVLTVGTTHISKLTDDQLIKEFLSGSYCFRGGVGWWKYEFCYGK 360
Query: 361 HVHQYHEDKDSGKTSVVVGTWNQEEHIEWAKKNTARAYHLQDDGTQTVRCKESDSPHAVT 420
HVHQYHEDKDSGKTSVVVGTWNQEEHIEWAKKNTARAYHLQDDGTQTVRCKESDSPHAVT
Sbjct: 361 HVHQYHEDKDSGKTSVVVGTWNQEEHIEWAKKNTARAYHLQDDGTQTVRCKESDSPHAVT 420
Query: 421 VYMLEPHSCQYILGVESPVICKILDTADENGLLSLPN 457
VYMLEPHSCQYILGVESPVICKILDTADENGLLSLPN
Sbjct: 421 VYMLEPHSCQYILGVESPVICKILDTADENGLLSLPN 457
>gi|20070264 erlectin isoform 1 [Homo sapiens]
Length = 483
Score = 941 bits (2432), Expect = 0.0
Identities = 457/483 (94%), Positives = 457/483 (94%), Gaps = 26/483 (5%)
Query: 1 MEEGGGGVRSLVPGGPVLLVLCGLLEASGGGRALPQLSDDIPFRVNWPGTEFSLPTTGVL 60
MEEGGGGVRSLVPGGPVLLVLCGLLEASGGGRALPQLSDDIPFRVNWPGTEFSLPTTGVL
Sbjct: 1 MEEGGGGVRSLVPGGPVLLVLCGLLEASGGGRALPQLSDDIPFRVNWPGTEFSLPTTGVL 60
Query: 61 YKEDNYVIMTTAHKEKYKCILPLVTSGDEEEEKDYKGPNPRELLEPLFKQSSCSYRIESY 120
YKEDNYVIMTTAHKEKYKCILPLVTSGDEEEEKDYKGPNPRELLEPLFKQSSCSYRIESY
Sbjct: 61 YKEDNYVIMTTAHKEKYKCILPLVTSGDEEEEKDYKGPNPRELLEPLFKQSSCSYRIESY 120
Query: 121 WTYEVCHGKHIRQYHEEKETGQKINIHEYYLGNMLAKNLLFEKEREAEEKEKSNEIPTKN 180
WTYEVCHGKHIRQYHEEKETGQKINIHEYYLGNMLAKNLLFEKEREAEEKEKSNEIPTKN
Sbjct: 121 WTYEVCHGKHIRQYHEEKETGQKINIHEYYLGNMLAKNLLFEKEREAEEKEKSNEIPTKN 180
Query: 181 IEGQMTPYYPVGMGNGTPCSLKQNRPRSSTVMYICHPESKHEILSVAEVTTCEYEVVILT 240
IEGQMTPYYPVGMGNGTPCSLKQNRPRSSTVMYICHPESKHEILSVAEVTTCEYEVVILT
Sbjct: 181 IEGQMTPYYPVGMGNGTPCSLKQNRPRSSTVMYICHPESKHEILSVAEVTTCEYEVVILT 240
Query: 241 PLLCSHPKYRFRASPVNDIFCQSLPGSPFKPLTLRQLEQQEEILRVPFRRNKEEDLQSTK 300
PLLCSHPKYRFRASPVNDIFCQSLPGSPFKPLTLRQLEQQEEILRVPFRRNKEEDLQSTK
Sbjct: 241 PLLCSHPKYRFRASPVNDIFCQSLPGSPFKPLTLRQLEQQEEILRVPFRRNKEEDLQSTK 300
Query: 301 EERFPAIHKSIAIGSQPVLTVGTTHISKLTDDQLIKEFLSGSYCFRGGVGWWKYEFCYGK 360
EERFPAIHKSIAIGSQPVLTVGTTHISKLTDDQLIKEFLSGSYCFRGGVGWWKYEFCYGK
Sbjct: 301 EERFPAIHKSIAIGSQPVLTVGTTHISKLTDDQLIKEFLSGSYCFRGGVGWWKYEFCYGK 360
Query: 361 HVHQYHEDKDSGKTSVVVGTWNQEEHIEWAKKNTARAYHLQDDGTQTVR----------- 409
HVHQYHEDKDSGKTSVVVGTWNQEEHIEWAKKNTARAYHLQDDGTQTVR
Sbjct: 361 HVHQYHEDKDSGKTSVVVGTWNQEEHIEWAKKNTARAYHLQDDGTQTVRMVSHFYGNGDI 420
Query: 410 ---------------CKESDSPHAVTVYMLEPHSCQYILGVESPVICKILDTADENGLLS 454
CKESDSPHAVTVYMLEPHSCQYILGVESPVICKILDTADENGLLS
Sbjct: 421 CDITDKPRQVTVKLKCKESDSPHAVTVYMLEPHSCQYILGVESPVICKILDTADENGLLS 480
Query: 455 LPN 457
LPN
Sbjct: 481 LPN 483
>gi|188528698 erlectin isoform 3 [Homo sapiens]
Length = 429
Score = 688 bits (1776), Expect = 0.0
Identities = 356/461 (77%), Positives = 369/461 (80%), Gaps = 36/461 (7%)
Query: 1 MEEGGGGVRSLVPGGPVLLVLCGLLEASGGGRALPQLSDDIPFRVNWPGTEFSLPTTGVL 60
MEEGGGGVRSLVPGGPVLLVLCGLLEASGGGRALPQLSDDIPFRVNWPGTEFSLPTTGVL
Sbjct: 1 MEEGGGGVRSLVPGGPVLLVLCGLLEASGGGRALPQLSDDIPFRVNWPGTEFSLPTTGVL 60
Query: 61 YKEDNYVIMTTAHKEKYKCILPLVTSGDEEEEKDYKGPNPRELLEPLFKQSSCSYRIESY 120
YKEDNYVIMTTAHKEKYKCILPLVTSGDEEEEKDYKGPNPRELLEPLFKQSSCSYRIESY
Sbjct: 61 YKEDNYVIMTTAHKEKYKCILPLVTSGDEEEEKDYKGPNPRELLEPLFKQSSCSYRIESY 120
Query: 121 WTYEVCHGKHIRQYHEEKETGQKINIHEYYLGNMLAKNLLFEKEREAEEKEKSNEIPTKN 180
WTYEVCHGKHIRQYHEEKETGQKINIHEYYLGNMLAKNLLFEKEREAEEKEKSNEIPTKN
Sbjct: 121 WTYEVCHGKHIRQYHEEKETGQKINIHEYYLGNMLAKNLLFEKEREAEEKEKSNEIPTKN 180
Query: 181 IEGQMTPYYPVGMGNGTPCSLKQNRPRSSTVMYICHPESKHEILSVAEVTTCEYEVVILT 240
IEGQMTPYYPVGMGNGTPCSLKQNRPRSSTVMYICHPESKHEILSVAEVTTCEYEVVILT
Sbjct: 181 IEGQMTPYYPVGMGNGTPCSLKQNRPRSSTVMYICHPESKHEILSVAEVTTCEYEVVILT 240
Query: 241 PLLCSHPKYRFRASPVNDIFCQSLPGSPFKPLTLRQLEQQEEILRVPFRRNKEEDLQSTK 300
PLLCSHPKYRFRASPVNDIFCQSLPGSPFKPLTLRQLEQQEEILRVPFRRNKE
Sbjct: 241 PLLCSHPKYRFRASPVNDIFCQSLPGSPFKPLTLRQLEQQEEILRVPFRRNKE------- 293
Query: 301 EERFPAIHKSIAIGSQPVLTVGTTHISKLTDDQLIKEFLSGSYCFRGGVGWWK----YEF 356
+G H+ + +D K+ S VG W E+
Sbjct: 294 -----------GVGWWKYEFCYGKHVHQYHED---KDSGKTSVV----VGTWNQEEHIEW 335
Query: 357 CYGKHVHQYHEDKDSGKTSVVVGTWNQEEHIEWAKKNTARAYHLQDDGTQTVRCKESDSP 416
YH D +T +V + + + T ++CKESDSP
Sbjct: 336 AKKNTARAYHLQDDGTQTVRMVSHF-------YGNGDICDITDKPRQVTVKLKCKESDSP 388
Query: 417 HAVTVYMLEPHSCQYILGVESPVICKILDTADENGLLSLPN 457
HAVTVYMLEPHSCQYILGVESPVICKILDTADENGLLSLPN
Sbjct: 389 HAVTVYMLEPHSCQYILGVESPVICKILDTADENGLLSLPN 429
>gi|63252870 osteosarcoma amplified 9 isoform 4 precursor [Homo
sapiens]
Length = 652
Score = 95.9 bits (237), Expect = 7e-20
Identities = 65/204 (31%), Positives = 99/204 (48%), Gaps = 24/204 (11%)
Query: 54 LPTTGVLYKEDNYVIMTTAHKEKYKCILPL----VTSGDEEEEKDYKGPNPRELLEPLFK 109
LP G + + VI+++ +K++Y+C LP EEE Y+GP ELL P+ +
Sbjct: 48 LPVMGGQSQSSDVVIVSSKYKQRYECRLPAGAIHFQREREEETPAYQGPGIPELLSPM-R 106
Query: 110 QSSCSYRIESYWTYEVCHGKHIRQYHEEKETGQKINIHEYYLGNMLAKNLLFEKEREAEE 169
+ C + + +WTYE C+G+HI+QYH E +I YLG + F+ + E +
Sbjct: 107 DAPCLLKTKDWWTYEFCYGRHIQQYHME---DSEIKGEVLYLGYYQS---AFDWDDETAK 160
Query: 170 KEKSNEIPTKNIEGQMTPYYPVGMGNGTPCSLKQNRPRSSTVMYICHPE---SKHEILSV 226
K + ++ Y+ GNG+ C L RPR + V ++C S I V
Sbjct: 161 ASKQH---------RLKRYHSQTYGNGSKCDL-NGRPREAEVRFLCDEGAGISGDYIDRV 210
Query: 227 AEVTTCEYEVVILTPLLCSHPKYR 250
E +C Y + I TP LC HP R
Sbjct: 211 DEPLSCSYVLTIRTPRLCPHPLLR 234
Score = 57.4 bits (137), Expect = 3e-08
Identities = 33/113 (29%), Positives = 51/113 (45%), Gaps = 23/113 (20%)
Query: 351 WWKYEFCYGKHVHQYHEDKDSGKTSVVVGTWNQ------EEHIEWAKKNTARAYHLQDDG 404
WW YEFCYG+H+ QYH + K V+ + Q +E + +K++ + YH Q G
Sbjct: 117 WWTYEFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYHSQTYG 176
Query: 405 TQTVRCKESDSPHAVTVYML----------------EPHSCQYILGVESPVIC 441
+ +C + P V L EP SC Y+L + +P +C
Sbjct: 177 NGS-KCDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTIRTPRLC 228
>gi|63252868 osteosarcoma amplified 9 isoform 3 precursor [Homo
sapiens]
Length = 597
Score = 95.9 bits (237), Expect = 7e-20
Identities = 65/204 (31%), Positives = 99/204 (48%), Gaps = 24/204 (11%)
Query: 54 LPTTGVLYKEDNYVIMTTAHKEKYKCILPL----VTSGDEEEEKDYKGPNPRELLEPLFK 109
LP G + + VI+++ +K++Y+C LP EEE Y+GP ELL P+ +
Sbjct: 48 LPVMGGQSQSSDVVIVSSKYKQRYECRLPAGAIHFQREREEETPAYQGPGIPELLSPM-R 106
Query: 110 QSSCSYRIESYWTYEVCHGKHIRQYHEEKETGQKINIHEYYLGNMLAKNLLFEKEREAEE 169
+ C + + +WTYE C+G+HI+QYH E +I YLG + F+ + E +
Sbjct: 107 DAPCLLKTKDWWTYEFCYGRHIQQYHME---DSEIKGEVLYLGYYQS---AFDWDDETAK 160
Query: 170 KEKSNEIPTKNIEGQMTPYYPVGMGNGTPCSLKQNRPRSSTVMYICHPE---SKHEILSV 226
K + ++ Y+ GNG+ C L RPR + V ++C S I V
Sbjct: 161 ASKQH---------RLKRYHSQTYGNGSKCDL-NGRPREAEVRFLCDEGAGISGDYIDRV 210
Query: 227 AEVTTCEYEVVILTPLLCSHPKYR 250
E +C Y + I TP LC HP R
Sbjct: 211 DEPLSCSYVLTIRTPRLCPHPLLR 234
Score = 57.4 bits (137), Expect = 3e-08
Identities = 33/113 (29%), Positives = 51/113 (45%), Gaps = 23/113 (20%)
Query: 351 WWKYEFCYGKHVHQYHEDKDSGKTSVVVGTWNQ------EEHIEWAKKNTARAYHLQDDG 404
WW YEFCYG+H+ QYH + K V+ + Q +E + +K++ + YH Q G
Sbjct: 117 WWTYEFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYHSQTYG 176
Query: 405 TQTVRCKESDSPHAVTVYML----------------EPHSCQYILGVESPVIC 441
+ +C + P V L EP SC Y+L + +P +C
Sbjct: 177 NGS-KCDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTIRTPRLC 228
>gi|63252866 osteosarcoma amplified 9 isoform 2 precursor [Homo
sapiens]
Length = 612
Score = 95.9 bits (237), Expect = 7e-20
Identities = 65/204 (31%), Positives = 99/204 (48%), Gaps = 24/204 (11%)
Query: 54 LPTTGVLYKEDNYVIMTTAHKEKYKCILPL----VTSGDEEEEKDYKGPNPRELLEPLFK 109
LP G + + VI+++ +K++Y+C LP EEE Y+GP ELL P+ +
Sbjct: 48 LPVMGGQSQSSDVVIVSSKYKQRYECRLPAGAIHFQREREEETPAYQGPGIPELLSPM-R 106
Query: 110 QSSCSYRIESYWTYEVCHGKHIRQYHEEKETGQKINIHEYYLGNMLAKNLLFEKEREAEE 169
+ C + + +WTYE C+G+HI+QYH E +I YLG + F+ + E +
Sbjct: 107 DAPCLLKTKDWWTYEFCYGRHIQQYHME---DSEIKGEVLYLGYYQS---AFDWDDETAK 160
Query: 170 KEKSNEIPTKNIEGQMTPYYPVGMGNGTPCSLKQNRPRSSTVMYICHPE---SKHEILSV 226
K + ++ Y+ GNG+ C L RPR + V ++C S I V
Sbjct: 161 ASKQH---------RLKRYHSQTYGNGSKCDL-NGRPREAEVRFLCDEGAGISGDYIDRV 210
Query: 227 AEVTTCEYEVVILTPLLCSHPKYR 250
E +C Y + I TP LC HP R
Sbjct: 211 DEPLSCSYVLTIRTPRLCPHPLLR 234
Score = 57.4 bits (137), Expect = 3e-08
Identities = 33/113 (29%), Positives = 51/113 (45%), Gaps = 23/113 (20%)
Query: 351 WWKYEFCYGKHVHQYHEDKDSGKTSVVVGTWNQ------EEHIEWAKKNTARAYHLQDDG 404
WW YEFCYG+H+ QYH + K V+ + Q +E + +K++ + YH Q G
Sbjct: 117 WWTYEFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYHSQTYG 176
Query: 405 TQTVRCKESDSPHAVTVYML----------------EPHSCQYILGVESPVIC 441
+ +C + P V L EP SC Y+L + +P +C
Sbjct: 177 NGS-KCDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTIRTPRLC 228
>gi|5803109 osteosarcoma amplified 9 isoform 1 precursor [Homo
sapiens]
Length = 667
Score = 95.9 bits (237), Expect = 7e-20
Identities = 65/204 (31%), Positives = 99/204 (48%), Gaps = 24/204 (11%)
Query: 54 LPTTGVLYKEDNYVIMTTAHKEKYKCILPL----VTSGDEEEEKDYKGPNPRELLEPLFK 109
LP G + + VI+++ +K++Y+C LP EEE Y+GP ELL P+ +
Sbjct: 48 LPVMGGQSQSSDVVIVSSKYKQRYECRLPAGAIHFQREREEETPAYQGPGIPELLSPM-R 106
Query: 110 QSSCSYRIESYWTYEVCHGKHIRQYHEEKETGQKINIHEYYLGNMLAKNLLFEKEREAEE 169
+ C + + +WTYE C+G+HI+QYH E +I YLG + F+ + E +
Sbjct: 107 DAPCLLKTKDWWTYEFCYGRHIQQYHME---DSEIKGEVLYLGYYQS---AFDWDDETAK 160
Query: 170 KEKSNEIPTKNIEGQMTPYYPVGMGNGTPCSLKQNRPRSSTVMYICHPE---SKHEILSV 226
K + ++ Y+ GNG+ C L RPR + V ++C S I V
Sbjct: 161 ASKQH---------RLKRYHSQTYGNGSKCDL-NGRPREAEVRFLCDEGAGISGDYIDRV 210
Query: 227 AEVTTCEYEVVILTPLLCSHPKYR 250
E +C Y + I TP LC HP R
Sbjct: 211 DEPLSCSYVLTIRTPRLCPHPLLR 234
Score = 57.4 bits (137), Expect = 3e-08
Identities = 33/113 (29%), Positives = 51/113 (45%), Gaps = 23/113 (20%)
Query: 351 WWKYEFCYGKHVHQYHEDKDSGKTSVVVGTWNQ------EEHIEWAKKNTARAYHLQDDG 404
WW YEFCYG+H+ QYH + K V+ + Q +E + +K++ + YH Q G
Sbjct: 117 WWTYEFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYHSQTYG 176
Query: 405 TQTVRCKESDSPHAVTVYML----------------EPHSCQYILGVESPVIC 441
+ +C + P V L EP SC Y+L + +P +C
Sbjct: 177 NGS-KCDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTIRTPRLC 228
>gi|14249738 N-acetylglucosamine-1-phosphotransferase, gamma subunit
[Homo sapiens]
Length = 305
Score = 39.7 bits (91), Expect = 0.006
Identities = 30/108 (27%), Positives = 48/108 (44%), Gaps = 10/108 (9%)
Query: 339 LSGSYCFRGGVGWWKYEFCYGKHVHQYHEDKDSGKTSVVVGTWNQEEHIEWAKKNTARAY 398
LSG CF +KYEFC +V Q+ + S ++G W++ E NT
Sbjct: 67 LSGK-CFSLVESTYKYEFCPFHNVTQHEQTFRWNAYSGILGIWHEWE----IANNTFTGM 121
Query: 399 HLQDDGTQTVRCKESDSPHAV-----TVYMLEPHSCQYILGVESPVIC 441
++D R ++S A ++ EP +C Y L E+P++C
Sbjct: 122 WMRDGDACRSRSRQSKVELACGKSNRLAHVSEPSTCVYALTFETPLVC 169
Score = 30.4 bits (67), Expect = 3.5
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 6/55 (10%)
Query: 193 MGNGTPCSLKQNRPRSSTVMYICHPESKHEILSVAEVTTCEYEVVILTPLLCSHP 247
M +G C ++R R S V C ++ + V+E +TC Y + TPL+C HP
Sbjct: 123 MRDGDAC---RSRSRQSKVELACGKSNR--LAHVSEPSTCVYALTFETPLVC-HP 171
>gi|226246554 hypothetical protein LOC643677 [Homo sapiens]
Length = 7081
Score = 34.7 bits (78), Expect = 0.18
Identities = 61/251 (24%), Positives = 98/251 (39%), Gaps = 37/251 (14%)
Query: 162 EKEREAEEKEKSNE-IPTKNIEGQMTPYYPVGMGNG-------TPCSLKQNRPR-SSTVM 212
+K + E+K K + +P+ N PY G SL Q+R + SS
Sbjct: 5055 QKRKIQEDKNKQVKGLPSINTSLLTPPYLKFDTTEGQENVIRIAKVSLPQSRSKESSDAG 5114
Query: 213 YICHPESKHEILS----------VAEVTTCEYEVVILTPLLCSHPKY-RFRASPVNDIFC 261
I PE+ H LS + + +V +T +L + Y + + SPV
Sbjct: 5115 RIACPEATHGELSSDVKQLKAHLLQKEEKDREKVADMTSVLDPNKMYLKAKKSPV----- 5169
Query: 262 QSLPGSPFKPLTLRQLEQQEEILRVPFRRNKEEDLQSTKEERFPAIHKSIAIGSQ----P 317
L F L + EQ+EE +V ++ + S R +H ++ G Q P
Sbjct: 5170 --LHTHSFSDLQWKTREQEEE--KVQKVKSGPGVMLSKSPSRSSPLHLNVNTGFQEESIP 5225
Query: 318 VLTVGTTHISKLTDDQLIKEFLSGSYCFRGGVGWWKYEFCYGKHVHQYHEDKDSGKTSVV 377
+LT + + KL + G C R G GKHV Q E+ D S++
Sbjct: 5226 ILTRPSFPLVKLQ----VSPDTEGGTCIRPIAGDILIYLQKGKHVSQNKEEDDVQIVSIL 5281
Query: 378 VGTWNQEEHIE 388
+ +QEE ++
Sbjct: 5282 IFPKHQEEKVQ 5292
>gi|239756039 PREDICTED: hypothetical protein LOC643677 [Homo sapiens]
Length = 6929
Score = 34.7 bits (78), Expect = 0.18
Identities = 61/251 (24%), Positives = 98/251 (39%), Gaps = 37/251 (14%)
Query: 162 EKEREAEEKEKSNE-IPTKNIEGQMTPYYPVGMGNG-------TPCSLKQNRPR-SSTVM 212
+K + E+K K + +P+ N PY G SL Q+R + SS
Sbjct: 4903 QKRKIQEDKNKQVKGLPSINTSLLTPPYLKFDTTEGQENVIRIAKVSLPQSRSKESSDAG 4962
Query: 213 YICHPESKHEILS----------VAEVTTCEYEVVILTPLLCSHPKY-RFRASPVNDIFC 261
I PE+ H LS + + +V +T +L + Y + + SPV
Sbjct: 4963 RIACPEATHGELSSDVKQLKAHLLQKEEKDREKVADMTSVLDPNKMYLKAKKSPV----- 5017
Query: 262 QSLPGSPFKPLTLRQLEQQEEILRVPFRRNKEEDLQSTKEERFPAIHKSIAIGSQ----P 317
L F L + EQ+EE +V ++ + S R +H ++ G Q P
Sbjct: 5018 --LHTHSFSDLQWKTREQEEE--KVQKVKSGPGVMLSKSPSRSSPLHLNVNTGFQEESIP 5073
Query: 318 VLTVGTTHISKLTDDQLIKEFLSGSYCFRGGVGWWKYEFCYGKHVHQYHEDKDSGKTSVV 377
+LT + + KL + G C R G GKHV Q E+ D S++
Sbjct: 5074 ILTRPSFPLVKLQ----VSPDTEGGTCIRPIAGDILIYLQKGKHVSQNKEEDDVQIVSIL 5129
Query: 378 VGTWNQEEHIE 388
+ +QEE ++
Sbjct: 5130 IFPKHQEEKVQ 5140
>gi|239750569 PREDICTED: hypothetical protein LOC643677 [Homo sapiens]
Length = 6929
Score = 34.7 bits (78), Expect = 0.18
Identities = 61/251 (24%), Positives = 98/251 (39%), Gaps = 37/251 (14%)
Query: 162 EKEREAEEKEKSNE-IPTKNIEGQMTPYYPVGMGNG-------TPCSLKQNRPR-SSTVM 212
+K + E+K K + +P+ N PY G SL Q+R + SS
Sbjct: 4903 QKRKIQEDKNKQVKGLPSINTSLLTPPYLKFDTTEGQENVIRIAKVSLPQSRSKESSDAG 4962
Query: 213 YICHPESKHEILS----------VAEVTTCEYEVVILTPLLCSHPKY-RFRASPVNDIFC 261
I PE+ H LS + + +V +T +L + Y + + SPV
Sbjct: 4963 RIACPEATHGELSSDVKQLKAHLLQKEEKDREKVADMTSVLDPNKMYLKAKKSPV----- 5017
Query: 262 QSLPGSPFKPLTLRQLEQQEEILRVPFRRNKEEDLQSTKEERFPAIHKSIAIGSQ----P 317
L F L + EQ+EE +V ++ + S R +H ++ G Q P
Sbjct: 5018 --LHTHSFSDLQWKTREQEEE--KVQKVKSGPGVMLSKSPSRSSPLHLNVNTGFQEESIP 5073
Query: 318 VLTVGTTHISKLTDDQLIKEFLSGSYCFRGGVGWWKYEFCYGKHVHQYHEDKDSGKTSVV 377
+LT + + KL + G C R G GKHV Q E+ D S++
Sbjct: 5074 ILTRPSFPLVKLQ----VSPDTEGGTCIRPIAGDILIYLQKGKHVSQNKEEDDVQIVSIL 5129
Query: 378 VGTWNQEEHIE 388
+ +QEE ++
Sbjct: 5130 IFPKHQEEKVQ 5140
>gi|239744870 PREDICTED: hypothetical protein LOC643677 [Homo sapiens]
Length = 6929
Score = 34.7 bits (78), Expect = 0.18
Identities = 61/251 (24%), Positives = 98/251 (39%), Gaps = 37/251 (14%)
Query: 162 EKEREAEEKEKSNE-IPTKNIEGQMTPYYPVGMGNG-------TPCSLKQNRPR-SSTVM 212
+K + E+K K + +P+ N PY G SL Q+R + SS
Sbjct: 4903 QKRKIQEDKNKQVKGLPSINTSLLTPPYLKFDTTEGQENVIRIAKVSLPQSRSKESSDAG 4962
Query: 213 YICHPESKHEILS----------VAEVTTCEYEVVILTPLLCSHPKY-RFRASPVNDIFC 261
I PE+ H LS + + +V +T +L + Y + + SPV
Sbjct: 4963 RIACPEATHGELSSDVKQLKAHLLQKEEKDREKVADMTSVLDPNKMYLKAKKSPV----- 5017
Query: 262 QSLPGSPFKPLTLRQLEQQEEILRVPFRRNKEEDLQSTKEERFPAIHKSIAIGSQ----P 317
L F L + EQ+EE +V ++ + S R +H ++ G Q P
Sbjct: 5018 --LHTHSFSDLQWKTREQEEE--KVQKVKSGPGVMLSKSPSRSSPLHLNVNTGFQEESIP 5073
Query: 318 VLTVGTTHISKLTDDQLIKEFLSGSYCFRGGVGWWKYEFCYGKHVHQYHEDKDSGKTSVV 377
+LT + + KL + G C R G GKHV Q E+ D S++
Sbjct: 5074 ILTRPSFPLVKLQ----VSPDTEGGTCIRPIAGDILIYLQKGKHVSQNKEEDDVQIVSIL 5129
Query: 378 VGTWNQEEHIE 388
+ +QEE ++
Sbjct: 5130 IFPKHQEEKVQ 5140
>gi|48255891 protein kinase C substrate 80K-H isoform 2 [Homo
sapiens]
Length = 525
Score = 33.5 bits (75), Expect = 0.41
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Query: 196 GTPCSLKQNRPRSSTVMYICHPESKHEILSVAEVTTCEYEVVILTPLLCSHP 247
GT C NR S+TV +C E+ + S E + CEY + ++TP C P
Sbjct: 465 GTGCWQGPNR--STTVRLLCGKETM--VTSTTEPSRCEYLMELMTPAACPEP 512
>gi|48255889 protein kinase C substrate 80K-H isoform 1 [Homo
sapiens]
Length = 528
Score = 33.5 bits (75), Expect = 0.41
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Query: 196 GTPCSLKQNRPRSSTVMYICHPESKHEILSVAEVTTCEYEVVILTPLLCSHP 247
GT C NR S+TV +C E+ + S E + CEY + ++TP C P
Sbjct: 468 GTGCWQGPNR--STTVRLLCGKETM--VTSTTEPSRCEYLMELMTPAACPEP 515
>gi|114431236 zinc finger protein 462 [Homo sapiens]
Length = 2506
Score = 32.7 bits (73), Expect = 0.70
Identities = 27/146 (18%), Positives = 59/146 (40%), Gaps = 8/146 (5%)
Query: 66 YVIMTTAHKEKYKCILPLVTSGDEEEEKDYKGPNPRELLEPL-FKQSSCSYRIESYWTYE 124
Y++ H Y+C+ + + E+ + + G + E + L F S YR + +Y
Sbjct: 875 YILDPNDHSAVYRCLECYIDYTNFEDLQQHYGEHHPEAMNVLNFDHSDLIYRCR-FCSYT 933
Query: 125 VCHGKHIRQYHEEKETGQKINIHEYYLGNMLAKNLLFEKEREAEEKEKSNEIPTKNIEGQ 184
+ + + +++ KIN M+ + + E++ + ++ +
Sbjct: 934 SPNVRSLMPHYQRMHPTVKIN------NAMIFSSYVVEQQEGLNTESQTLREILNSAPKN 987
Query: 185 MTPYYPVGMGNGTPCSLKQNRPRSST 210
M PV G G P + +N P++ T
Sbjct: 988 MATSTPVARGGGLPATFNKNTPKTFT 1013
>gi|14249340 phospholipase C, delta 4 [Homo sapiens]
Length = 762
Score = 32.0 bits (71), Expect = 1.2
Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 7/104 (6%)
Query: 220 KHEILSVAEVT--TCEYEVVILTPLLCSHPKYRFRASPVNDIFCQSLPGSPFKPLTLRQL 277
K + +VA+ T +Y V++ CS + + A + +I + L + + QL
Sbjct: 361 KDVVATVAQYAFQTSDYPVILSLETHCSWEQQQTMARHLTEILGEQLLSTTLDGVLPTQL 420
Query: 278 EQQEEILRVPFRRNK----EEDLQSTKEERFPAIHKS-IAIGSQ 316
EE+ R + K EEDL+ +EE P + +S +A+ SQ
Sbjct: 421 PSPEELRRKILVKGKKLTLEEDLEYEEEEAEPELEESELALESQ 464
>gi|239753102 PREDICTED: hypothetical protein [Homo sapiens]
Length = 252
Score = 30.8 bits (68), Expect = 2.7
Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 12/52 (23%)
Query: 3 EGGGGVRSLVPG----GPVLLVLC--------GLLEASGGGRALPQLSDDIP 42
E GGG R+L+PG GP +V LL GGRAL +L D P
Sbjct: 26 EAGGGERALLPGLGRRGPRRIVAAVGGGGRGAPLLPCGAGGRALDRLDDPSP 77
>gi|221136848 neuroblastoma breakpoint family, member 6 isoform 2
[Homo sapiens]
Length = 638
Score = 29.6 bits (65), Expect = 5.9
Identities = 25/93 (26%), Positives = 39/93 (41%), Gaps = 7/93 (7%)
Query: 88 DEEEEKDYKGPNPRELLEPLFKQSSCSYRIESYWTYEVCHGKHIRQYHEEKETGQKINIH 147
DEE EK + P PRE+ + K+ E T C H + KI
Sbjct: 178 DEEVEKVQESPAPREVQKTEEKEVPQDSLEECAVT---CSNSHNPSNSNQPHRSTKITFK 234
Query: 148 EYYLGNMLAKNLLFEKEREAEEKEKSNEIPTKN 180
E+ + + L+ E E +E+E++ IP +N
Sbjct: 235 EHEVDSA----LVVESEHPHDEEEEALNIPPEN 263
>gi|221136844 neuroblastoma breakpoint family, member 6 isoform 1
[Homo sapiens]
Length = 667
Score = 29.6 bits (65), Expect = 5.9
Identities = 25/93 (26%), Positives = 39/93 (41%), Gaps = 7/93 (7%)
Query: 88 DEEEEKDYKGPNPRELLEPLFKQSSCSYRIESYWTYEVCHGKHIRQYHEEKETGQKINIH 147
DEE EK + P PRE+ + K+ E T C H + KI
Sbjct: 178 DEEVEKVQESPAPREVQKTEEKEVPQDSLEECAVT---CSNSHNPSNSNQPHRSTKITFK 234
Query: 148 EYYLGNMLAKNLLFEKEREAEEKEKSNEIPTKN 180
E+ + + L+ E E +E+E++ IP +N
Sbjct: 235 EHEVDSA----LVVESEHPHDEEEEALNIPPEN 263
>gi|221218991 neuroblastoma breakpoint family, member 4 [Homo
sapiens]
Length = 638
Score = 29.6 bits (65), Expect = 5.9
Identities = 25/93 (26%), Positives = 39/93 (41%), Gaps = 7/93 (7%)
Query: 88 DEEEEKDYKGPNPRELLEPLFKQSSCSYRIESYWTYEVCHGKHIRQYHEEKETGQKINIH 147
DEE EK + P PRE+ + K+ E T C H + KI
Sbjct: 178 DEEVEKVQESPAPREVQKTEEKEVPQDSLEECAVT---CSNSHNPSNSNQPHRSTKITFK 234
Query: 148 EYYLGNMLAKNLLFEKEREAEEKEKSNEIPTKN 180
E+ + + L+ E E +E+E++ IP +N
Sbjct: 235 EHEVDSA----LVVESEHPHDEEEEALNIPPEN 263
>gi|73427803 lethal giant larvae homolog 2 isoform c [Homo sapiens]
Length = 1020
Score = 29.6 bits (65), Expect = 5.9
Identities = 47/164 (28%), Positives = 67/164 (40%), Gaps = 37/164 (22%)
Query: 287 PFRRNKEEDL---QSTKEERFPAIHKSIAIGSQP---VLTVGTTHISKLTDDQLIKEFLS 340
P R + DL T E FP H+ A+G P +L +GT S
Sbjct: 11 PVRERLKRDLFQFNKTVEHGFP--HQPSALGYSPSLRILAIGTR---------------S 53
Query: 341 GSYCFRGGVGWWKYEFCYGKH-----VHQYHEDKDSGKTSVVVGTWNQEEHIEWAKKNTA 395
G+ G G EF G H V Q H G+ +V + H+ W+ K
Sbjct: 54 GAIKLYGAPG---VEFM-GLHQENNAVTQIH--LLPGQCQLVTLLDDNSLHL-WSLKVKG 106
Query: 396 RAYHLQDDGTQTVRCKESDSPHAVTVYMLEPH-SCQYI-LGVES 437
A LQ+D + T+R +P A + ++ PH SC+ + LG ES
Sbjct: 107 GASELQEDESFTLRGPPGAAPSATQITVVLPHSSCELLYLGTES 150
>gi|48762732 phosphodiesterase 9A isoform h [Homo sapiens]
Length = 507
Score = 29.6 bits (65), Expect = 5.9
Identities = 13/37 (35%), Positives = 26/37 (70%), Gaps = 4/37 (10%)
Query: 253 ASPVNDIFC--QSLPGSPFK--PLTLRQLEQQEEILR 285
+S + D+FC LP +P+K P+ ++QL ++EE+++
Sbjct: 32 SSDIMDLFCIATGLPRTPYKVRPVAIKQLSEREELIQ 68
>gi|62739163 lethal giant larvae homolog 2 isoform b [Homo sapiens]
Length = 356
Score = 29.6 bits (65), Expect = 5.9
Identities = 47/164 (28%), Positives = 67/164 (40%), Gaps = 37/164 (22%)
Query: 287 PFRRNKEEDL---QSTKEERFPAIHKSIAIGSQP---VLTVGTTHISKLTDDQLIKEFLS 340
P R + DL T E FP H+ A+G P +L +GT S
Sbjct: 11 PVRERLKRDLFQFNKTVEHGFP--HQPSALGYSPSLRILAIGTR---------------S 53
Query: 341 GSYCFRGGVGWWKYEFCYGKH-----VHQYHEDKDSGKTSVVVGTWNQEEHIEWAKKNTA 395
G+ G G EF G H V Q H G+ +V + H+ W+ K
Sbjct: 54 GAIKLYGAPG---VEFM-GLHQENNAVTQIH--LLPGQCQLVTLLDDNSLHL-WSLKVKG 106
Query: 396 RAYHLQDDGTQTVRCKESDSPHAVTVYMLEPH-SCQYI-LGVES 437
A LQ+D + T+R +P A + ++ PH SC+ + LG ES
Sbjct: 107 GASELQEDESFTLRGPPGAAPSATQITVVLPHSSCELLYLGTES 150
>gi|62739161 lethal giant larvae homolog 2 isoform a [Homo sapiens]
Length = 1015
Score = 29.6 bits (65), Expect = 5.9
Identities = 47/164 (28%), Positives = 67/164 (40%), Gaps = 37/164 (22%)
Query: 287 PFRRNKEEDL---QSTKEERFPAIHKSIAIGSQP---VLTVGTTHISKLTDDQLIKEFLS 340
P R + DL T E FP H+ A+G P +L +GT S
Sbjct: 11 PVRERLKRDLFQFNKTVEHGFP--HQPSALGYSPSLRILAIGTR---------------S 53
Query: 341 GSYCFRGGVGWWKYEFCYGKH-----VHQYHEDKDSGKTSVVVGTWNQEEHIEWAKKNTA 395
G+ G G EF G H V Q H G+ +V + H+ W+ K
Sbjct: 54 GAIKLYGAPG---VEFM-GLHQENNAVTQIH--LLPGQCQLVTLLDDNSLHL-WSLKVKG 106
Query: 396 RAYHLQDDGTQTVRCKESDSPHAVTVYMLEPH-SCQYI-LGVES 437
A LQ+D + T+R +P A + ++ PH SC+ + LG ES
Sbjct: 107 GASELQEDESFTLRGPPGAAPSATQITVVLPHSSCELLYLGTES 150
>gi|28395045 Bardet-Biedl syndrome 1 [Homo sapiens]
Length = 593
Score = 29.6 bits (65), Expect = 5.9
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
Query: 271 PLTLRQL-----EQQEEILRVPFRRNKEEDLQSTKEERFPAIHKSIAIGSQPVLTVGTTH 325
PLTL+++ E EE L + R + L+ ++ E F HKS +I Q V+T TT
Sbjct: 149 PLTLKEMLESIRETAEEPLSIQSLRFLQ--LELSEMEAFVNQHKSNSIKRQTVITTMTTL 206
Query: 326 ISKLTDDQLIKEFLSGS 342
L D+ + + G+
Sbjct: 207 KKNLADEDAVSCLVLGT 223
>gi|18375528 UPF3 regulator of nonsense transcripts homolog B
isoform 1 [Homo sapiens]
Length = 483
Score = 29.6 bits (65), Expect = 5.9
Identities = 16/69 (23%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Query: 143 KINIHEYYLGNMLAKNLLFE----KEREAEEKEKSNEIPTKNIEGQMTPYYPVGMGNGTP 198
KI +H + L + KNLL + E+E +++EK+ ++ +N+ + + +
Sbjct: 267 KIKVHRFLLQAVNQKNLLKKPEKGDEKELDKREKAKKLDKENLSDERASGQSCTLPKRSD 326
Query: 199 CSLKQNRPR 207
LK +P+
Sbjct: 327 SELKDEKPK 335
>gi|47419911 transcriptional intermediary factor 1 alpha isoform a
[Homo sapiens]
Length = 1050
Score = 29.6 bits (65), Expect = 5.9
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Query: 385 EHIEWAKKNTARAYH-LQDDGTQTVRCKESDSPHAVTVYMLEPHSCQYILGVESPVICKI 443
E +EW K RA+ ++ TVR KE SP AV V P C + + + C+
Sbjct: 178 ECVEWLCKTCIRAHQRVKFTKDHTVRQKEEVSPEAVGVTSQRPVFCPFHKKEQLKLYCET 237
Query: 444 LD 445
D
Sbjct: 238 CD 239
>gi|47419909 transcriptional intermediary factor 1 alpha isoform b
[Homo sapiens]
Length = 1016
Score = 29.6 bits (65), Expect = 5.9
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Query: 385 EHIEWAKKNTARAYH-LQDDGTQTVRCKESDSPHAVTVYMLEPHSCQYILGVESPVICKI 443
E +EW K RA+ ++ TVR KE SP AV V P C + + + C+
Sbjct: 178 ECVEWLCKTCIRAHQRVKFTKDHTVRQKEEVSPEAVGVTSQRPVFCPFHKKEQLKLYCET 237
Query: 444 LD 445
D
Sbjct: 238 CD 239
>gi|16933557 dachsous 1 precursor [Homo sapiens]
Length = 3298
Score = 29.6 bits (65), Expect = 5.9
Identities = 25/99 (25%), Positives = 41/99 (41%), Gaps = 5/99 (5%)
Query: 256 VNDIFCQSLPGSPFKPLT--LRQLEQQEEILRVPFRRNKEEDLQSTKEERFPAIHKSIAI 313
V +F P LT L+QL + + R+ + + LQ+ E+ + + +
Sbjct: 1124 VGRVFATDRDSGPNGRLTYSLQQLSEDSKAFRIHPQTGEVTTLQTLDREQQSSYQLLVQV 1183
Query: 314 ---GSQPVLTVGTTHISKLTDDQLIKEFLSGSYCFRGGV 349
GS P T GT H++ L + FL S GG+
Sbjct: 1184 QDGGSPPRSTTGTVHVAVLDLNDNSPTFLQASGAAGGGL 1222
>gi|90903231 huntingtin [Homo sapiens]
Length = 3144
Score = 29.3 bits (64), Expect = 7.8
Identities = 17/56 (30%), Positives = 32/56 (57%), Gaps = 8/56 (14%)
Query: 125 VCHGKHIRQYHEEKETGQ------KINIHEYYLGNMLAKNLLFEKEREAEEKEKSN 174
+ H K + Q + E+E G +++IH +LGN + L E+E + EE+E+++
Sbjct: 2594 ISHEKLLLQINPERELGSMSYKLGQVSIHSVWLGNSITP--LREEEWDEEEEEEAD 2647
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.135 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,628,563
Number of Sequences: 37866
Number of extensions: 1049371
Number of successful extensions: 2987
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 2931
Number of HSP's gapped (non-prelim): 60
length of query: 457
length of database: 18,247,518
effective HSP length: 106
effective length of query: 351
effective length of database: 14,233,722
effective search space: 4996036422
effective search space used: 4996036422
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.