| Name: BBS1 | Sequence: fasta or formatted (593aa) | NCBI GI: 28395045 | |
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Description: Bardet-Biedl syndrome 1
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Referenced in:
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 9.4 56 4 C cysteine 1.3 8 1 D aspartate 3.7 22 1 E glutamate 6.2 37 2 F phenylalanine 3.2 19 2 G glycine 6.1 36 3 H histidine 2.5 15 1 I isoleucine 3.5 21 2 K lysine 5.1 30 2 L leucine 14.8 88 2 M methionine 2.5 15 1 N asparagine 3.7 22 1 P proline 6.4 38 3 Q glutamine 3.9 23 2 R arginine 5.2 31 2 S serine 6.6 39 3 T threonine 5.9 35 2 V valine 6.7 40 2 W tryptophan 0.5 3 1 Y tyrosine 2.5 15 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 Bardet-Biedl syndrome 1 BBS2 0.010 Bardet-Biedl syndrome 2 protein BFSP1 0.007 filensin isoform 1 BFSP1 0.007 filensin isoform 2 PRX 0.006 periaxin isoform 2 KIF9 0.006 kinesin family member 9 isoform 2 KIF9 0.006 kinesin family member 9 isoform 2 CCDC144B 0.006 coiled-coil domain containing 144B ZEB1 0.006 zinc finger E-box binding homeobox 1 isoform a [Hom... ZEB1 0.006 zinc finger E-box binding homeobox 1 isoform b [Hom... PSG11 0.006 pregnancy specific beta-1-glycoprotein 11 isoform 2... PSG11 0.006 pregnancy specific beta-1-glycoprotein 11 isoform 2... CCNB3 0.006 cyclin B3 isoform 3 KIF3A 0.005 kinesin family member 3A DYNC1H1 0.005 cytoplasmic dynein 1 heavy chain 1 FAM71E2 0.005 hypothetical protein LOC284418 KIAA1529 0.005 hypothetical protein LOC57653 LOC283685 0.004 PREDICTED: golgi autoantigen, golgin subfamily a-li... LOC283685 0.004 PREDICTED: golgi autoantigen, golgin subfamily a-li... TYK2 0.004 tyrosine kinase 2 RAI14 0.004 retinoic acid induced 14 isoform d RAI14 0.004 retinoic acid induced 14 isoform c RAI14 0.004 retinoic acid induced 14 isoform b RAI14 0.004 retinoic acid induced 14 isoform a RAI14 0.004 retinoic acid induced 14 isoform a RAI14 0.004 retinoic acid induced 14 isoform a C2orf30 0.004 erlectin isoform 2 C2orf30 0.004 erlectin isoform 1 CDCA3 0.004 cell division cycle associated 3 PSG11 0.004 pregnancy specific beta-1-glycoprotein 11 isoform 1...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
