Guide to the Human Genome
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Name: LLGL2 Sequence: fasta or formatted (1015aa) NCBI GI: 62739161
Description:

lethal giant larvae homolog 2 isoform a

Referenced in:

ER, Golgi, and the Secretory Pathway

Other entries for this name:
alt prot [356aa] lethal giant larvae homolog 2 isoform b
alt prot [1020aa] lethal giant larvae homolog 2 isoform c
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.8         79           2
 C cysteine            1.6         16           1
 D aspartate           4.5         46           2
 E glutamate           6.6         67           3
 F phenylalanine       4.1         42           1
 G glycine             7.3         74           2
 H histidine           3.3         34           2
 I isoleucine          3.3         33           2
 K lysine              3.3         34           2
 L leucine            11.1        113           3
 M methionine          1.2         12           1
 N asparagine          1.8         18           2
 P proline             6.9         70           2
 Q glutamine           5.6         57           2
 R arginine            7.5         76           2
 S serine              8.3         84           2
 T threonine           4.4         45           2
 V valine              7.5         76           2
 W tryptophan          1.7         17           2
 Y tyrosine            2.2         22           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   lethal giant larvae homolog 2 isoform a 
LLGL2                 0.970   lethal giant larvae homolog 2 isoform c 
LLGL1                 0.529   lethal giant larvae homolog 1 
LLGL2                 0.336   lethal giant larvae homolog 2 isoform b 
STXBP5                0.172   syntaxin binding protein 5 (tomosyn) isoform a [Hom...
STXBP5                0.168   syntaxin binding protein 5 (tomosyn) isoform b [Hom...
STXBP5L               0.149   syntaxin binding protein 5-like 
C7orf47               0.009   hypothetical protein LOC221908 
WDFY2                 0.008   WD repeat and FYVE domain containing 2 
COPB2                 0.007   coatomer protein complex, subunit beta 2 (beta prime)...
WDR90                 0.006   WD repeat domain 90 
AAMP                  0.005   angio-associated, migratory cell protein 
TLE2                  0.005   transducin-like enhancer protein 2 isoform 3 
TLE2                  0.005   transducin-like enhancer protein 2 isoform 1 
TLE1                  0.005   transducin-like enhancer protein 1 
RBBP5                 0.005   retinoblastoma binding protein 5 
TLE4                  0.005   transducin-like enhancer protein 4 
TLE3                  0.005   transducin-like enhancer protein 3 isoform b 
TLE3                  0.005   transducin-like enhancer protein 3 isoform c 
TLE3                  0.005   transducin-like enhancer protein 3 isoform a 
WDR86                 0.004   WD repeat domain 86 
EML5                  0.004   echinoderm microtubule associated protein like 5 [Ho...
DTL                   0.004   denticleless homolog 
WDR69                 0.004   WD repeat domain 69 
NUP43                 0.004   nucleoporin 43kDa 
FBXW7                 0.004   F-box and WD repeat domain containing 7 isoform 3 [H...
FBXW7                 0.004   F-box and WD repeat domain containing 7 isoform 1 [H...
FBXW7                 0.004   F-box and WD repeat domain containing 7 isoform 2 [H...
MEF2A                 0.004   myocyte enhancer factor 2A isoform 4 
MEF2A                 0.004   myocyte enhancer factor 2A isoform 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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