Guide to the Human Genome
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Name: C2orf30 Sequence: fasta or formatted (429aa) NCBI GI: 188528698
Description:

erlectin isoform 3

Referenced in:

Bone and Related Tissues

Other entries for this name:
alt prot [457aa] erlectin isoform 2
alt prot [483aa] erlectin isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             2.8         12           1
 C cysteine            3.3         14           1
 D aspartate           3.7         16           2
 E glutamate          10.3         44           4
 F phenylalanine       2.3         10           1
 G glycine             7.5         32           4
 H histidine           3.7         16           1
 I isoleucine          4.7         20           1
 K lysine              7.2         31           2
 L leucine             8.6         37           2
 M methionine          1.9          8           1
 N asparagine          4.0         17           1
 P proline             6.5         28           1
 Q glutamine           3.7         16           2
 R arginine            4.2         18           2
 S serine              6.3         27           2
 T threonine           5.8         25           2
 V valine              7.0         30           3
 W tryptophan          1.4          6           2
 Y tyrosine            5.1         22           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   erlectin isoform 3 
C2orf30               0.755   erlectin isoform 2 
C2orf30               0.667   erlectin isoform 1 
OS9                   0.081   osteosarcoma amplified 9 isoform 4 precursor 
OS9                   0.081   osteosarcoma amplified 9 isoform 3 precursor 
OS9                   0.081   osteosarcoma amplified 9 isoform 2 precursor 
OS9                   0.081   osteosarcoma amplified 9 isoform 1 precursor 
GNPTG                 0.018   N-acetylglucosamine-1-phosphotransferase, gamma subu...
CYP7A1                0.011   cytochrome P450, family 7, subfamily A, polypeptide...
PRKCSH                0.009   protein kinase C substrate 80K-H isoform 2 
PRKCSH                0.009   protein kinase C substrate 80K-H isoform 1 
ZNF462                0.009   zinc finger protein 462 
LOC100292909          0.007   PREDICTED: hypothetical protein 
NBPF6                 0.006   neuroblastoma breakpoint family, member 6 isoform 2...
NBPF6                 0.006   neuroblastoma breakpoint family, member 6 isoform 1...
NBPF4                 0.006   neuroblastoma breakpoint family, member 4 
PDE9A                 0.006   phosphodiesterase 9A isoform h 
UPF3B                 0.006   UPF3 regulator of nonsense transcripts homolog B iso...
HTT                   0.005   huntingtin 
NOL10                 0.005   nucleolar protein 10 
CSPP1                 0.005   centrosome spindle pole associated protein 1 isofor...
CSPP1                 0.005   centrosome spindle pole associated protein 1 isofor...
IGF2R                 0.005   insulin-like growth factor 2 receptor precursor [Ho...
TNKS2                 0.005   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
LRRIQ1                0.005   leucine-rich repeats and IQ motif containing 1 isof...
LRRIQ1                0.005   leucine-rich repeats and IQ motif containing 1 isof...
GTF3C3                0.005   general transcription factor IIIC, polypeptide 3, 102...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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