Guide to the Human Genome
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Name: METT11D1 Sequence: fasta or formatted (456aa) NCBI GI: 12232389
Description:

methyltransferase 11 domain containing 1 isoform 2

Not currently referenced in the text

Other entries for this name:
alt prot {478aa} methyltransferase 11 domain containing 1 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.0         41           3
 C cysteine            2.2         10           2
 D aspartate           3.1         14           1
 E glutamate           5.5         25           2
 F phenylalanine       3.9         18           2
 G glycine             6.6         30           2
 H histidine           4.4         20           1
 I isoleucine          1.5          7           1
 K lysine              4.8         22           2
 L leucine            12.7         58           4
 M methionine          2.0          9           1
 N asparagine          1.8          8           1
 P proline             8.3         38           2
 Q glutamine           4.8         22           1
 R arginine            7.0         32           2
 S serine              7.2         33           2
 T threonine           4.6         21           2
 V valine              6.8         31           3
 W tryptophan          2.0          9           1
 Y tyrosine            1.8          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   methyltransferase 11 domain containing 1 isoform 2 [... 
METT11D1              0.922   methyltransferase 11 domain containing 1 isoform 1 [...
KIR2DL1               0.007   killer cell immunoglobulin-like receptor, two domai...
ST6GALNAC1            0.005   sialyltransferase 7A 
C20orf7               0.005   hypothetical protein LOC79133 isoform 1 
MRM1                  0.005   mitochondrial rRNA methyltransferase 1 homolog [Homo...
SFRP5                 0.005   secreted frizzled-related protein 5 
LOC100289067          0.005   PREDICTED: hypothetical protein XP_002342619 
ALDH6A1               0.005   aldehyde dehydrogenase 6A1 precursor 
LOC100292680          0.005   PREDICTED: similar to hCG2003440 
PKD1L3                0.004   PREDICTED: polycystic kidney disease 1-like 3 [Homo...
PKD1L3                0.004   PREDICTED: polycystic kidney disease 1-like 3 [Homo...
PKD1L3                0.004   PREDICTED: polycystin 1-like 3 
PKD1L3                0.004   polycystin 1-like 3 
BATF                  0.004   basic leucine zipper transcription factor, ATF-like [...
CYTH2                 0.004   cytohesin 2 isoform 2 
CYTH2                 0.004   cytohesin 2 isoform 1 
SH2D3A                0.004   SH2 domain containing 3A 
PTPDC1                0.004   protein tyrosine phosphatase domain containing 1 pro...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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