Search of human proteins with 188219575

Search of human proteins with 188219575

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|188219575 putative homeodomain transcription factor 2
isoform 4 [Homo sapiens]
         (352 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|188219575 putative homeodomain transcription factor 2 isoform...   721   0.0  
gi|188219573 putative homeodomain transcription factor 2 isoform...   716   0.0  
gi|188219571 putative homeodomain transcription factor 2 isoform...   687   0.0  
gi|188219565 putative homeodomain transcription factor 2 isoform...   687   0.0  
gi|188219569 putative homeodomain transcription factor 2 isoform...   681   0.0  
gi|166197666 putative homeodomain transcription factor 1 [Homo s...   263   1e-70
gi|150418009 transforming, acidic coiled-coil containing protein...    36   0.045
gi|60097902 filaggrin [Homo sapiens]                                   33   0.38 
gi|62241003 cardiomyopathy associated 5 [Homo sapiens]                 32   1.1  
gi|109637791 transcription factor-like nuclear regulator [Homo s...    32   1.1  
gi|237681121 breast cancer 1, early onset isoform 3 [Homo sapiens]     31   1.5  
gi|6552299 breast cancer 1, early onset isoform 1 [Homo sapiens]       31   1.5  
gi|239749217 PREDICTED: similar to Mucin-12, partial [Homo sapiens]    31   1.5  
gi|58535455 androgen receptor isoform 2 [Homo sapiens]                 31   1.9  
gi|21322252 androgen receptor isoform 1 [Homo sapiens]                 31   1.9  
gi|237681125 breast cancer 1, early onset isoform 5 [Homo sapiens]     30   2.5  
gi|237681123 breast cancer 1, early onset isoform 4 [Homo sapiens]     30   2.5  
gi|19913358 Wolf-Hirschhorn syndrome candidate 1 protein isoform...    30   2.5  
gi|19913350 Wolf-Hirschhorn syndrome candidate 1 protein isoform...    30   2.5  
gi|19913348 Wolf-Hirschhorn syndrome candidate 1 protein isoform...    30   2.5  
gi|109633019 Wolf-Hirschhorn syndrome candidate 1 protein isofor...    30   2.5  
gi|169213065 PREDICTED: similar to hCG1654128 [Homo sapiens]           30   3.3  
gi|169213233 PREDICTED: similar to hCG1654128 [Homo sapiens]           30   3.3  
gi|17738287 secretory carrier membrane protein 4 [Homo sapiens]        30   3.3  
gi|206597541 solute carrier family 39 (metal ion transporter), m...    30   4.3  
gi|206597539 solute carrier family 39 (metal ion transporter), m...    30   4.3  
gi|19913369 transducin beta-like 3 [Homo sapiens]                      30   4.3  
gi|82524851 paralemmin 2 isoform a [Homo sapiens]                      29   5.6  
gi|22325356 PALM2-AKAP2 protein isoform 2 [Homo sapiens]               29   5.6  
gi|6005709 PALM2-AKAP2 protein isoform 1 [Homo sapiens]                29   5.6  

>gi|188219575 putative homeodomain transcription factor 2 isoform 4
           [Homo sapiens]
          Length = 352

 Score =  721 bits (1862), Expect = 0.0
 Identities = 352/352 (100%), Positives = 352/352 (100%)

Query: 1   MASKVTDAIVWYQKKIGAYDQQIWEKSVEQREIKGLRNKPKKTAHVKPDLIDVDLVRGSA 60
           MASKVTDAIVWYQKKIGAYDQQIWEKSVEQREIKGLRNKPKKTAHVKPDLIDVDLVRGSA
Sbjct: 1   MASKVTDAIVWYQKKIGAYDQQIWEKSVEQREIKGLRNKPKKTAHVKPDLIDVDLVRGSA 60

Query: 61  FAKAKPESPWTSLTRKGIVRVVFFPFFFRWWLQVTSKVIFFWLLVLYLLQVAAIVLFCST 120
           FAKAKPESPWTSLTRKGIVRVVFFPFFFRWWLQVTSKVIFFWLLVLYLLQVAAIVLFCST
Sbjct: 61  FAKAKPESPWTSLTRKGIVRVVFFPFFFRWWLQVTSKVIFFWLLVLYLLQVAAIVLFCST 120

Query: 121 SSPHSIPLTEVIGPIWLMLLLGTVHCQIVSTRTPKPPLSTGGKRRRKLRKAAHLEVHREG 180
           SSPHSIPLTEVIGPIWLMLLLGTVHCQIVSTRTPKPPLSTGGKRRRKLRKAAHLEVHREG
Sbjct: 121 SSPHSIPLTEVIGPIWLMLLLGTVHCQIVSTRTPKPPLSTGGKRRRKLRKAAHLEVHREG 180

Query: 181 DGSSTTDNTQEGAVQNHGTSTSHSVGTVFRDLWHAAFFLSGSKKAKNSIDKSTETDNGYV 240
           DGSSTTDNTQEGAVQNHGTSTSHSVGTVFRDLWHAAFFLSGSKKAKNSIDKSTETDNGYV
Sbjct: 181 DGSSTTDNTQEGAVQNHGTSTSHSVGTVFRDLWHAAFFLSGSKKAKNSIDKSTETDNGYV 240

Query: 241 SLDGKKTVKSGEDGIQNHEPQCETIRPEETAWNTGTLRNGPSKDTQRTITNVSDEVSSEE 300
           SLDGKKTVKSGEDGIQNHEPQCETIRPEETAWNTGTLRNGPSKDTQRTITNVSDEVSSEE
Sbjct: 241 SLDGKKTVKSGEDGIQNHEPQCETIRPEETAWNTGTLRNGPSKDTQRTITNVSDEVSSEE 300

Query: 301 GPETGYSLRRHVDRTSEGVLRNRKSHHYKKHYPNEVYTLSLSVYIRIYFICY 352
           GPETGYSLRRHVDRTSEGVLRNRKSHHYKKHYPNEVYTLSLSVYIRIYFICY
Sbjct: 301 GPETGYSLRRHVDRTSEGVLRNRKSHHYKKHYPNEVYTLSLSVYIRIYFICY 352


>gi|188219573 putative homeodomain transcription factor 2 isoform 3
           [Homo sapiens]
          Length = 356

 Score =  716 bits (1847), Expect = 0.0
 Identities = 352/356 (98%), Positives = 352/356 (98%), Gaps = 4/356 (1%)

Query: 1   MASKVTDAIVWYQKKIGAYDQQIWEKSVEQREIK----GLRNKPKKTAHVKPDLIDVDLV 56
           MASKVTDAIVWYQKKIGAYDQQIWEKSVEQREIK    GLRNKPKKTAHVKPDLIDVDLV
Sbjct: 1   MASKVTDAIVWYQKKIGAYDQQIWEKSVEQREIKFIKLGLRNKPKKTAHVKPDLIDVDLV 60

Query: 57  RGSAFAKAKPESPWTSLTRKGIVRVVFFPFFFRWWLQVTSKVIFFWLLVLYLLQVAAIVL 116
           RGSAFAKAKPESPWTSLTRKGIVRVVFFPFFFRWWLQVTSKVIFFWLLVLYLLQVAAIVL
Sbjct: 61  RGSAFAKAKPESPWTSLTRKGIVRVVFFPFFFRWWLQVTSKVIFFWLLVLYLLQVAAIVL 120

Query: 117 FCSTSSPHSIPLTEVIGPIWLMLLLGTVHCQIVSTRTPKPPLSTGGKRRRKLRKAAHLEV 176
           FCSTSSPHSIPLTEVIGPIWLMLLLGTVHCQIVSTRTPKPPLSTGGKRRRKLRKAAHLEV
Sbjct: 121 FCSTSSPHSIPLTEVIGPIWLMLLLGTVHCQIVSTRTPKPPLSTGGKRRRKLRKAAHLEV 180

Query: 177 HREGDGSSTTDNTQEGAVQNHGTSTSHSVGTVFRDLWHAAFFLSGSKKAKNSIDKSTETD 236
           HREGDGSSTTDNTQEGAVQNHGTSTSHSVGTVFRDLWHAAFFLSGSKKAKNSIDKSTETD
Sbjct: 181 HREGDGSSTTDNTQEGAVQNHGTSTSHSVGTVFRDLWHAAFFLSGSKKAKNSIDKSTETD 240

Query: 237 NGYVSLDGKKTVKSGEDGIQNHEPQCETIRPEETAWNTGTLRNGPSKDTQRTITNVSDEV 296
           NGYVSLDGKKTVKSGEDGIQNHEPQCETIRPEETAWNTGTLRNGPSKDTQRTITNVSDEV
Sbjct: 241 NGYVSLDGKKTVKSGEDGIQNHEPQCETIRPEETAWNTGTLRNGPSKDTQRTITNVSDEV 300

Query: 297 SSEEGPETGYSLRRHVDRTSEGVLRNRKSHHYKKHYPNEVYTLSLSVYIRIYFICY 352
           SSEEGPETGYSLRRHVDRTSEGVLRNRKSHHYKKHYPNEVYTLSLSVYIRIYFICY
Sbjct: 301 SSEEGPETGYSLRRHVDRTSEGVLRNRKSHHYKKHYPNEVYTLSLSVYIRIYFICY 356


>gi|188219571 putative homeodomain transcription factor 2 isoform 2
           [Homo sapiens]
          Length = 747

 Score =  687 bits (1773), Expect = 0.0
 Identities = 335/335 (100%), Positives = 335/335 (100%)

Query: 1   MASKVTDAIVWYQKKIGAYDQQIWEKSVEQREIKGLRNKPKKTAHVKPDLIDVDLVRGSA 60
           MASKVTDAIVWYQKKIGAYDQQIWEKSVEQREIKGLRNKPKKTAHVKPDLIDVDLVRGSA
Sbjct: 1   MASKVTDAIVWYQKKIGAYDQQIWEKSVEQREIKGLRNKPKKTAHVKPDLIDVDLVRGSA 60

Query: 61  FAKAKPESPWTSLTRKGIVRVVFFPFFFRWWLQVTSKVIFFWLLVLYLLQVAAIVLFCST 120
           FAKAKPESPWTSLTRKGIVRVVFFPFFFRWWLQVTSKVIFFWLLVLYLLQVAAIVLFCST
Sbjct: 61  FAKAKPESPWTSLTRKGIVRVVFFPFFFRWWLQVTSKVIFFWLLVLYLLQVAAIVLFCST 120

Query: 121 SSPHSIPLTEVIGPIWLMLLLGTVHCQIVSTRTPKPPLSTGGKRRRKLRKAAHLEVHREG 180
           SSPHSIPLTEVIGPIWLMLLLGTVHCQIVSTRTPKPPLSTGGKRRRKLRKAAHLEVHREG
Sbjct: 121 SSPHSIPLTEVIGPIWLMLLLGTVHCQIVSTRTPKPPLSTGGKRRRKLRKAAHLEVHREG 180

Query: 181 DGSSTTDNTQEGAVQNHGTSTSHSVGTVFRDLWHAAFFLSGSKKAKNSIDKSTETDNGYV 240
           DGSSTTDNTQEGAVQNHGTSTSHSVGTVFRDLWHAAFFLSGSKKAKNSIDKSTETDNGYV
Sbjct: 181 DGSSTTDNTQEGAVQNHGTSTSHSVGTVFRDLWHAAFFLSGSKKAKNSIDKSTETDNGYV 240

Query: 241 SLDGKKTVKSGEDGIQNHEPQCETIRPEETAWNTGTLRNGPSKDTQRTITNVSDEVSSEE 300
           SLDGKKTVKSGEDGIQNHEPQCETIRPEETAWNTGTLRNGPSKDTQRTITNVSDEVSSEE
Sbjct: 241 SLDGKKTVKSGEDGIQNHEPQCETIRPEETAWNTGTLRNGPSKDTQRTITNVSDEVSSEE 300

Query: 301 GPETGYSLRRHVDRTSEGVLRNRKSHHYKKHYPNE 335
           GPETGYSLRRHVDRTSEGVLRNRKSHHYKKHYPNE
Sbjct: 301 GPETGYSLRRHVDRTSEGVLRNRKSHHYKKHYPNE 335


>gi|188219565 putative homeodomain transcription factor 2 isoform 2
           [Homo sapiens]
          Length = 747

 Score =  687 bits (1773), Expect = 0.0
 Identities = 335/335 (100%), Positives = 335/335 (100%)

Query: 1   MASKVTDAIVWYQKKIGAYDQQIWEKSVEQREIKGLRNKPKKTAHVKPDLIDVDLVRGSA 60
           MASKVTDAIVWYQKKIGAYDQQIWEKSVEQREIKGLRNKPKKTAHVKPDLIDVDLVRGSA
Sbjct: 1   MASKVTDAIVWYQKKIGAYDQQIWEKSVEQREIKGLRNKPKKTAHVKPDLIDVDLVRGSA 60

Query: 61  FAKAKPESPWTSLTRKGIVRVVFFPFFFRWWLQVTSKVIFFWLLVLYLLQVAAIVLFCST 120
           FAKAKPESPWTSLTRKGIVRVVFFPFFFRWWLQVTSKVIFFWLLVLYLLQVAAIVLFCST
Sbjct: 61  FAKAKPESPWTSLTRKGIVRVVFFPFFFRWWLQVTSKVIFFWLLVLYLLQVAAIVLFCST 120

Query: 121 SSPHSIPLTEVIGPIWLMLLLGTVHCQIVSTRTPKPPLSTGGKRRRKLRKAAHLEVHREG 180
           SSPHSIPLTEVIGPIWLMLLLGTVHCQIVSTRTPKPPLSTGGKRRRKLRKAAHLEVHREG
Sbjct: 121 SSPHSIPLTEVIGPIWLMLLLGTVHCQIVSTRTPKPPLSTGGKRRRKLRKAAHLEVHREG 180

Query: 181 DGSSTTDNTQEGAVQNHGTSTSHSVGTVFRDLWHAAFFLSGSKKAKNSIDKSTETDNGYV 240
           DGSSTTDNTQEGAVQNHGTSTSHSVGTVFRDLWHAAFFLSGSKKAKNSIDKSTETDNGYV
Sbjct: 181 DGSSTTDNTQEGAVQNHGTSTSHSVGTVFRDLWHAAFFLSGSKKAKNSIDKSTETDNGYV 240

Query: 241 SLDGKKTVKSGEDGIQNHEPQCETIRPEETAWNTGTLRNGPSKDTQRTITNVSDEVSSEE 300
           SLDGKKTVKSGEDGIQNHEPQCETIRPEETAWNTGTLRNGPSKDTQRTITNVSDEVSSEE
Sbjct: 241 SLDGKKTVKSGEDGIQNHEPQCETIRPEETAWNTGTLRNGPSKDTQRTITNVSDEVSSEE 300

Query: 301 GPETGYSLRRHVDRTSEGVLRNRKSHHYKKHYPNE 335
           GPETGYSLRRHVDRTSEGVLRNRKSHHYKKHYPNE
Sbjct: 301 GPETGYSLRRHVDRTSEGVLRNRKSHHYKKHYPNE 335


>gi|188219569 putative homeodomain transcription factor 2 isoform 1
           [Homo sapiens]
          Length = 751

 Score =  681 bits (1758), Expect = 0.0
 Identities = 335/339 (98%), Positives = 335/339 (98%), Gaps = 4/339 (1%)

Query: 1   MASKVTDAIVWYQKKIGAYDQQIWEKSVEQREIK----GLRNKPKKTAHVKPDLIDVDLV 56
           MASKVTDAIVWYQKKIGAYDQQIWEKSVEQREIK    GLRNKPKKTAHVKPDLIDVDLV
Sbjct: 1   MASKVTDAIVWYQKKIGAYDQQIWEKSVEQREIKFIKLGLRNKPKKTAHVKPDLIDVDLV 60

Query: 57  RGSAFAKAKPESPWTSLTRKGIVRVVFFPFFFRWWLQVTSKVIFFWLLVLYLLQVAAIVL 116
           RGSAFAKAKPESPWTSLTRKGIVRVVFFPFFFRWWLQVTSKVIFFWLLVLYLLQVAAIVL
Sbjct: 61  RGSAFAKAKPESPWTSLTRKGIVRVVFFPFFFRWWLQVTSKVIFFWLLVLYLLQVAAIVL 120

Query: 117 FCSTSSPHSIPLTEVIGPIWLMLLLGTVHCQIVSTRTPKPPLSTGGKRRRKLRKAAHLEV 176
           FCSTSSPHSIPLTEVIGPIWLMLLLGTVHCQIVSTRTPKPPLSTGGKRRRKLRKAAHLEV
Sbjct: 121 FCSTSSPHSIPLTEVIGPIWLMLLLGTVHCQIVSTRTPKPPLSTGGKRRRKLRKAAHLEV 180

Query: 177 HREGDGSSTTDNTQEGAVQNHGTSTSHSVGTVFRDLWHAAFFLSGSKKAKNSIDKSTETD 236
           HREGDGSSTTDNTQEGAVQNHGTSTSHSVGTVFRDLWHAAFFLSGSKKAKNSIDKSTETD
Sbjct: 181 HREGDGSSTTDNTQEGAVQNHGTSTSHSVGTVFRDLWHAAFFLSGSKKAKNSIDKSTETD 240

Query: 237 NGYVSLDGKKTVKSGEDGIQNHEPQCETIRPEETAWNTGTLRNGPSKDTQRTITNVSDEV 296
           NGYVSLDGKKTVKSGEDGIQNHEPQCETIRPEETAWNTGTLRNGPSKDTQRTITNVSDEV
Sbjct: 241 NGYVSLDGKKTVKSGEDGIQNHEPQCETIRPEETAWNTGTLRNGPSKDTQRTITNVSDEV 300

Query: 297 SSEEGPETGYSLRRHVDRTSEGVLRNRKSHHYKKHYPNE 335
           SSEEGPETGYSLRRHVDRTSEGVLRNRKSHHYKKHYPNE
Sbjct: 301 SSEEGPETGYSLRRHVDRTSEGVLRNRKSHHYKKHYPNE 339


>gi|166197666 putative homeodomain transcription factor 1 [Homo
           sapiens]
          Length = 762

 Score =  263 bits (673), Expect = 1e-70
 Identities = 164/344 (47%), Positives = 200/344 (58%), Gaps = 53/344 (15%)

Query: 1   MASKVTDAIVWYQKKIGAYDQQIWEKSVEQREIKGLRNKPKKTAHVKPDLIDVDLVRGSA 60
           MAS   DAI WYQKKIGAYDQQIWEKS+EQ +IKGL+NKPKK  H+KPDLIDVDL+RGS 
Sbjct: 1   MASNERDAISWYQKKIGAYDQQIWEKSIEQTQIKGLKNKPKKMGHIKPDLIDVDLIRGST 60

Query: 61  FAKAKPESPWTSLTRKGIVRVVFFPFFFRWWLQVTSKVIFFWLLVLYLLQVAAIVLFCST 120
           FAKAKPE PWTSLTRKG+VRVVFFP F  WW+QVTS  IF WLL+LY +QV AIVL+   
Sbjct: 61  FAKAKPEIPWTSLTRKGLVRVVFFPLFSNWWIQVTSLRIFVWLLLLYFMQVIAIVLYLMM 120

Query: 121 SSPHSIPLTEVIGPIWLMLLLGTVHCQIVSTRTPKPPLSTGGKRRRKLRKAAHLEVHREG 180
                + ++EV+GP+ LMLL+GTVHCQIVST+  +P  + G +RRRKLRK  +      G
Sbjct: 121 P---IVNISEVLGPLCLMLLMGTVHCQIVSTQITRPSGNNGNRRRRKLRKTVN------G 171

Query: 181 DGSSTTDNTQEGAVQNHGTSTSHSVGTVFRDLWHAAFFLSGSKKAKNSIDKSTETDNGYV 240
           DGS    N     V+  G  T  SV  +    W    F +  K+ K   +K TETDN   
Sbjct: 172 DGSRENGNNSSDKVR--GIETLESV-PIIGGFWE-TIFGNRIKRVKLISNKGTETDN--- 224

Query: 241 SLDGKKTVKSGEDGIQNHEPQC-------ETIRPEETAWNT---GTLRNGPS--KDTQRT 288
                             +P C          RPE   W T       +G    ++  R 
Sbjct: 225 ------------------DPSCVHPIIKRRQCRPEIRMWQTREKAKFSDGEKCRREAFRR 266

Query: 289 ITN-VSDEVSSEEGPETGYS---LRRHVDRTSEG---VLRNRKS 325
           + N VSD++SSEE  E       LRR V+  S      ++NRKS
Sbjct: 267 LGNGVSDDLSSEEDGEARTQMILLRRSVEGASSDNGCEVKNRKS 310


>gi|150418009 transforming, acidic coiled-coil containing protein 2
            isoform a [Homo sapiens]
          Length = 2948

 Score = 36.2 bits (82), Expect = 0.045
 Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 8/70 (11%)

Query: 243  DGKKTVKSGEDGIQNHEPQCETIRPEETAWNTGTLRNGPS-------KDTQRTITNV-SD 294
            DGK  V S  +  + H+P+ + + PEE   +  + R GPS       KD  R +  V SD
Sbjct: 1789 DGKVCVSSPPEPDETHDPKLQHLAPEELHTDRESPRPGPSMLPSVPKKDAPRVMDKVTSD 1848

Query: 295  EVSSEEGPET 304
            E    EG E+
Sbjct: 1849 ETRGAEGTES 1858


>gi|60097902 filaggrin [Homo sapiens]
          Length = 4061

 Score = 33.1 bits (74), Expect = 0.38
 Identities = 47/182 (25%), Positives = 71/182 (39%), Gaps = 36/182 (19%)

Query: 159  STGGK---RRRKLRKAAHLEVHREGDGS----------STTDNTQEGAVQNHGTSTSHSV 205
            STGG+   R  + R ++     +EG  +              +  E +V   G S SH  
Sbjct: 3730 STGGRQGSRHEQARDSSRHSASQEGQDTIRGHPGSRRGGRQGSYHEQSVDRSGHSGSHHS 3789

Query: 206  GTVFRDLWHAAFFLSGSKKAKNSIDKSTETDNGYVSLDGKKTVKSGEDGIQNHEPQCETI 265
             T  +    A+   SGS+ A      S ET N   S DG     S   G ++HE   +  
Sbjct: 3790 HTTSQGRSDASHGQSGSRSA------SRETRNEEQSGDG-----SRHSGSRHHEASTQAD 3838

Query: 266  RPEETAWNTGTLRNGPSKDTQRTITNVSDEVSSEEGPETGYSLRRHVDRTSEGVLRNRKS 325
                +   +G   +  S+ ++R  ++VS +  SE  PE         +R SE   RN   
Sbjct: 3839 SSRHS--QSGQGESAGSRRSRRQGSSVSQDSDSEAYPEDS-------ERRSESASRN--- 3886

Query: 326  HH 327
            HH
Sbjct: 3887 HH 3888



 Score = 28.5 bits (62), Expect = 9.5
 Identities = 47/189 (24%), Positives = 74/189 (39%), Gaps = 32/189 (16%)

Query: 159 STGGKR---RRKLRKAAHLEVHREGD-------GSST---TDNTQEGAVQNHGTSTSHSV 205
           STGG++     + R ++     +EG        GSS      +  E +V   G S SH  
Sbjct: 488 STGGRQGSHHEQARDSSRHSASQEGQDTIRGHPGSSRGGRQGSHHEQSVNRSGHSGSHHS 547

Query: 206 GTVFRDLWHAAFFLSGSKKAKNSIDKSTETDNGYVSLDGKKTVKSGEDGIQNHEPQCETI 265
            T  +    A+   SGS+ A      S +T N   S DG +       G ++HE   +  
Sbjct: 548 HTTSQGRSDASHGQSGSRSA------SRQTRNEEQSGDGTR-----HSGSRHHEASSQAD 596

Query: 266 RPEETAWNTGTLRNGP--SKDTQRTITNVSDEVSSEEGPE--TGYSLRRH---VDRTSEG 318
               +    G   +GP  S++   +++  SD     E  E  +G + R H       S  
Sbjct: 597 SSRHSQVGQGQ-SSGPRTSRNQGSSVSQDSDSQGHSEDSERWSGSASRNHHGSAQEQSRD 655

Query: 319 VLRNRKSHH 327
             R+ +SHH
Sbjct: 656 GSRHPRSHH 664


>gi|62241003 cardiomyopathy associated 5 [Homo sapiens]
          Length = 4069

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 20/77 (25%), Positives = 36/77 (46%), Gaps = 9/77 (11%)

Query: 234  ETDNGYVSLDGKKTVKSGEDGIQNHEPQCETIRPEETAWNTGT-------LRNG-PSKDT 285
            E +N  +S +G   ++     + +H  + E  +  E  W  G+       ++ G PSK++
Sbjct: 2733 EIENHSLSQEGNLVLEKSSRDMPDHSEEKEQFKESEL-WKGGSVDITKESMKEGFPSKES 2791

Query: 286  QRTITNVSDEVSSEEGP 302
            +RT+    DE  S E P
Sbjct: 2792 ERTLARPFDETKSSETP 2808


>gi|109637791 transcription factor-like nuclear regulator [Homo
           sapiens]
          Length = 2624

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 28/121 (23%), Positives = 54/121 (44%), Gaps = 1/121 (0%)

Query: 149 VSTRTPKPPLSTGGKRRRKLRKAAHLEVHREGDGS-STTDNTQEGAVQNHGTSTSHSVGT 207
           V   + K   ST  ++  K++K A   V+ + D S S+  +  E + ++  T    S+  
Sbjct: 386 VKNHSLKEKKSTKPRKNVKVKKVACEGVNNDPDESMSSRISDTERSQKDAQTVEEESLTL 445

Query: 208 VFRDLWHAAFFLSGSKKAKNSIDKSTETDNGYVSLDGKKTVKSGEDGIQNHEPQCETIRP 267
              D    A  +  ++K +    +    + G  +L    TV++G    + H+ +C+ IRP
Sbjct: 446 SREDAEQVALEVDLNQKKRRRKKQDGANELGVNNLLENATVQAGPSKGEKHKNKCQAIRP 505

Query: 268 E 268
           E
Sbjct: 506 E 506


>gi|237681121 breast cancer 1, early onset isoform 3 [Homo sapiens]
          Length = 1816

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 39/151 (25%), Positives = 66/151 (43%), Gaps = 30/151 (19%)

Query: 191  EGAVQNHGTSTSHSVGTVFRDLWHAAFFL----SGSKKAKNSIDKSTE-----------T 235
            E  ++ HG+  S+S  ++  D            S S+KA  +  KS+E            
Sbjct: 1368 EAVLEQHGSQPSNSYPSIISDSSALEDLRNPEQSTSEKAVLTSQKSSEYPISQNPEGLSA 1427

Query: 236  DNGYVSLDGKKTVKSGEDGIQNHEP-QCETIRPEETAWN----TGTL--RNGPSKDTQRT 288
            D   VS D   T K+ E G++   P +C ++   +  W     +G+L  RN PS++    
Sbjct: 1428 DKFEVSADSS-TSKNKEPGVERSSPSKCPSL---DDRWYMHSCSGSLQNRNYPSQEELIK 1483

Query: 289  ITNVSDEVSSEEGP----ETGYSLRRHVDRT 315
            + +V ++   E GP    ET Y  R+ ++ T
Sbjct: 1484 VVDVEEQQLEESGPHDLTETSYLPRQDLEGT 1514


>gi|6552299 breast cancer 1, early onset isoform 1 [Homo sapiens]
          Length = 1863

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 39/151 (25%), Positives = 66/151 (43%), Gaps = 30/151 (19%)

Query: 191  EGAVQNHGTSTSHSVGTVFRDLWHAAFFL----SGSKKAKNSIDKSTE-----------T 235
            E  ++ HG+  S+S  ++  D            S S+KA  +  KS+E            
Sbjct: 1415 EAVLEQHGSQPSNSYPSIISDSSALEDLRNPEQSTSEKAVLTSQKSSEYPISQNPEGLSA 1474

Query: 236  DNGYVSLDGKKTVKSGEDGIQNHEP-QCETIRPEETAWN----TGTL--RNGPSKDTQRT 288
            D   VS D   T K+ E G++   P +C ++   +  W     +G+L  RN PS++    
Sbjct: 1475 DKFEVSADSS-TSKNKEPGVERSSPSKCPSL---DDRWYMHSCSGSLQNRNYPSQEELIK 1530

Query: 289  ITNVSDEVSSEEGP----ETGYSLRRHVDRT 315
            + +V ++   E GP    ET Y  R+ ++ T
Sbjct: 1531 VVDVEEQQLEESGPHDLTETSYLPRQDLEGT 1561


>gi|239749217 PREDICTED: similar to Mucin-12, partial [Homo sapiens]
          Length = 861

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 43/173 (24%), Positives = 65/173 (37%), Gaps = 26/173 (15%)

Query: 181 DGSSTTDNTQEGA-VQNHGTSTSHSVGTVFRDLWHAAFFLSGSKKAKNSIDKSTETDNGY 239
           D SS+T NT  G    +  T +S    T F D   +  F++GS   K+ +D ST + +  
Sbjct: 19  DRSSSTVNTSIGGNTTSASTPSSSDPFTTFSDYGVSVTFITGSTATKHFLDSSTNSGHSE 78

Query: 240 VSLDGKKTVKSGEDGIQNHEPQCETIRPEETAWN--TGTLRNGPSKDTQRTITNVSDEVS 297
            S     TV     G         T+ P  +A +   G  +  P        T +    +
Sbjct: 79  ES-----TVSHSGPGATG-----TTLFPSHSATSVFVGEPKTSPITSASMETTALPGSTT 128

Query: 298 S---EEGPETGYSLRRHVDR-------TSEGVLRNRKSHHYKKHYPNEVYTLS 340
           +    E   T YS  R  DR       TS GV     + H +   P   +T++
Sbjct: 129 TAGLSEKSTTFYSSPRSPDRTLSPARTTSSGVSEKSTTSHSR---PGPTHTIA 178


>gi|58535455 androgen receptor isoform 2 [Homo sapiens]
          Length = 388

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 13/26 (50%), Positives = 19/26 (73%)

Query: 166 RKLRKAAHLEVHREGDGSSTTDNTQE 191
           RKL+K  +L++  EG+ SSTT  T+E
Sbjct: 98  RKLKKLGNLKLQEEGEASSTTSPTEE 123


>gi|21322252 androgen receptor isoform 1 [Homo sapiens]
          Length = 920

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 13/26 (50%), Positives = 19/26 (73%)

Query: 166 RKLRKAAHLEVHREGDGSSTTDNTQE 191
           RKL+K  +L++  EG+ SSTT  T+E
Sbjct: 630 RKLKKLGNLKLQEEGEASSTTSPTEE 655


>gi|237681125 breast cancer 1, early onset isoform 5 [Homo sapiens]
          Length = 699

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 36/150 (24%), Positives = 66/150 (44%), Gaps = 29/150 (19%)

Query: 191 EGAVQNHGTSTSHSVGTVFRDLWH-----------AAFFLSGSKKAKNSIDKSTE---TD 236
           E  ++ HG+  S+S  ++  D              +   L+  K ++  I ++ E    D
Sbjct: 312 EAVLEQHGSQPSNSYPSIISDSSALEDLRNPEQSTSEKVLTSQKSSEYPISQNPEGLSAD 371

Query: 237 NGYVSLDGKKTVKSGEDGIQNHEP-QCETIRPEETAWN----TGTL--RNGPSKDTQRTI 289
              VS D   T K+ E G++   P +C ++   +  W     +G+L  RN PS++    +
Sbjct: 372 KFEVSADSS-TSKNKEPGVERSSPSKCPSL---DDRWYMHSCSGSLQNRNYPSQEELIKV 427

Query: 290 TNVSDEVSSEEGP----ETGYSLRRHVDRT 315
            +V ++   E GP    ET Y  R+ ++ T
Sbjct: 428 VDVEEQQLEESGPHDLTETSYLPRQDLEGT 457


>gi|237681123 breast cancer 1, early onset isoform 4 [Homo sapiens]
          Length = 759

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 36/150 (24%), Positives = 66/150 (44%), Gaps = 29/150 (19%)

Query: 191 EGAVQNHGTSTSHSVGTVFRDLWH-----------AAFFLSGSKKAKNSIDKSTE---TD 236
           E  ++ HG+  S+S  ++  D              +   L+  K ++  I ++ E    D
Sbjct: 312 EAVLEQHGSQPSNSYPSIISDSSALEDLRNPEQSTSEKVLTSQKSSEYPISQNPEGLSAD 371

Query: 237 NGYVSLDGKKTVKSGEDGIQNHEP-QCETIRPEETAWN----TGTL--RNGPSKDTQRTI 289
              VS D   T K+ E G++   P +C ++   +  W     +G+L  RN PS++    +
Sbjct: 372 KFEVSADSS-TSKNKEPGVERSSPSKCPSL---DDRWYMHSCSGSLQNRNYPSQEELIKV 427

Query: 290 TNVSDEVSSEEGP----ETGYSLRRHVDRT 315
            +V ++   E GP    ET Y  R+ ++ T
Sbjct: 428 VDVEEQQLEESGPHDLTETSYLPRQDLEGT 457


>gi|19913358 Wolf-Hirschhorn syndrome candidate 1 protein isoform 1
           [Homo sapiens]
          Length = 1365

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 26/115 (22%), Positives = 50/115 (43%), Gaps = 5/115 (4%)

Query: 222 SKKAKNSIDKSTETDNGYVSLDGKKTVKSGEDGIQNHEPQCETIRPEETAWNTGTLRNGP 281
           S + +++I   T   + Y +++   ++KS +   +N    C+ ++    A    +   G 
Sbjct: 555 SLRKRDTITDKTARTSSYKAMEAASSLKS-QAATKNLSDACKPLKKRNRASTAASSALGF 613

Query: 282 SKDTQRTITNVSDEVSSEEGPETGYSLRRHVDRT-SEGVLRNRKSHH---YKKHY 332
           SK +  + +   +EVS   G E   S     D T +E  + ++KS      KK Y
Sbjct: 614 SKSSSPSASLTENEVSDSPGDEPSESPYESADETQTEVSVSSKKSERGVTAKKEY 668


>gi|19913350 Wolf-Hirschhorn syndrome candidate 1 protein isoform 1
           [Homo sapiens]
          Length = 1365

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 26/115 (22%), Positives = 50/115 (43%), Gaps = 5/115 (4%)

Query: 222 SKKAKNSIDKSTETDNGYVSLDGKKTVKSGEDGIQNHEPQCETIRPEETAWNTGTLRNGP 281
           S + +++I   T   + Y +++   ++KS +   +N    C+ ++    A    +   G 
Sbjct: 555 SLRKRDTITDKTARTSSYKAMEAASSLKS-QAATKNLSDACKPLKKRNRASTAASSALGF 613

Query: 282 SKDTQRTITNVSDEVSSEEGPETGYSLRRHVDRT-SEGVLRNRKSHH---YKKHY 332
           SK +  + +   +EVS   G E   S     D T +E  + ++KS      KK Y
Sbjct: 614 SKSSSPSASLTENEVSDSPGDEPSESPYESADETQTEVSVSSKKSERGVTAKKEY 668


>gi|19913348 Wolf-Hirschhorn syndrome candidate 1 protein isoform 1
           [Homo sapiens]
          Length = 1365

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 26/115 (22%), Positives = 50/115 (43%), Gaps = 5/115 (4%)

Query: 222 SKKAKNSIDKSTETDNGYVSLDGKKTVKSGEDGIQNHEPQCETIRPEETAWNTGTLRNGP 281
           S + +++I   T   + Y +++   ++KS +   +N    C+ ++    A    +   G 
Sbjct: 555 SLRKRDTITDKTARTSSYKAMEAASSLKS-QAATKNLSDACKPLKKRNRASTAASSALGF 613

Query: 282 SKDTQRTITNVSDEVSSEEGPETGYSLRRHVDRT-SEGVLRNRKSHH---YKKHY 332
           SK +  + +   +EVS   G E   S     D T +E  + ++KS      KK Y
Sbjct: 614 SKSSSPSASLTENEVSDSPGDEPSESPYESADETQTEVSVSSKKSERGVTAKKEY 668


>gi|109633019 Wolf-Hirschhorn syndrome candidate 1 protein isoform 1
           [Homo sapiens]
          Length = 1365

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 26/115 (22%), Positives = 50/115 (43%), Gaps = 5/115 (4%)

Query: 222 SKKAKNSIDKSTETDNGYVSLDGKKTVKSGEDGIQNHEPQCETIRPEETAWNTGTLRNGP 281
           S + +++I   T   + Y +++   ++KS +   +N    C+ ++    A    +   G 
Sbjct: 555 SLRKRDTITDKTARTSSYKAMEAASSLKS-QAATKNLSDACKPLKKRNRASTAASSALGF 613

Query: 282 SKDTQRTITNVSDEVSSEEGPETGYSLRRHVDRT-SEGVLRNRKSHH---YKKHY 332
           SK +  + +   +EVS   G E   S     D T +E  + ++KS      KK Y
Sbjct: 614 SKSSSPSASLTENEVSDSPGDEPSESPYESADETQTEVSVSSKKSERGVTAKKEY 668


>gi|169213065 PREDICTED: similar to hCG1654128 [Homo sapiens]
          Length = 851

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 28/118 (23%), Positives = 47/118 (39%), Gaps = 6/118 (5%)

Query: 201 TSHSVGTVFRDLWHAAFFLSGSKKAKNSIDKSTETDNGYVSLDGKKTVKSGEDGIQNHEP 260
           T H VG        A+    G  + ++  + ++ T++G    DG +     E G+   E 
Sbjct: 62  TEHDVGQEEDGPEDASPTEHGVDQQEDGPEDASPTEHGVNQEDGPEDASPTEHGVDQQED 121

Query: 261 QCETIRPEETAWNTGTLRNGPSKDTQRTITNVSDEVSSEEGPETGYSLRRHVDRTSEG 318
             E  RP E   +     +GP +D   T   V  +   E+GPE        +D+  +G
Sbjct: 122 GPEDARPTEHGIDQE--EDGP-EDASLTEHGVDQQ---EDGPEDASPTEHGIDQEEDG 173


>gi|169213233 PREDICTED: similar to hCG1654128 [Homo sapiens]
          Length = 1070

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 28/118 (23%), Positives = 47/118 (39%), Gaps = 6/118 (5%)

Query: 201 TSHSVGTVFRDLWHAAFFLSGSKKAKNSIDKSTETDNGYVSLDGKKTVKSGEDGIQNHEP 260
           T H VG        A+    G  + ++  + ++ T++G    DG +     E G+   E 
Sbjct: 283 TEHDVGQEEDGPEDASPTEHGVDQQEDGPEDASPTEHGVNQEDGPEDASPTEHGVDQQED 342

Query: 261 QCETIRPEETAWNTGTLRNGPSKDTQRTITNVSDEVSSEEGPETGYSLRRHVDRTSEG 318
             E  RP E   +     +GP +D   T   V  +   E+GPE        +D+  +G
Sbjct: 343 GPEDARPTEHGIDQE--EDGP-EDASLTEHGVDQQ---EDGPEDASPTEHGIDQEEDG 394


>gi|17738287 secretory carrier membrane protein 4 [Homo sapiens]
          Length = 229

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 11/18 (61%), Positives = 14/18 (77%)

Query: 269 ETAWNTGTLRNGPSKDTQ 286
           +T WNTGT RN PS++ Q
Sbjct: 187 QTEWNTGTWRNPPSREAQ 204


>gi|206597541 solute carrier family 39 (metal ion transporter),
           member 5 [Homo sapiens]
          Length = 540

 Score = 29.6 bits (65), Expect = 4.3
 Identities = 20/48 (41%), Positives = 25/48 (52%)

Query: 104 LVLYLLQVAAIVLFCSTSSPHSIPLTEVIGPIWLMLLLGTVHCQIVST 151
           L+  LLQ A  VL  S  SP S+ L  ++GP  L  LLG +    V T
Sbjct: 209 LLSALLQSALAVLLLSLPSPLSLLLLRLLGPRLLRPLLGFLGALAVGT 256


>gi|206597539 solute carrier family 39 (metal ion transporter),
           member 5 [Homo sapiens]
          Length = 540

 Score = 29.6 bits (65), Expect = 4.3
 Identities = 20/48 (41%), Positives = 25/48 (52%)

Query: 104 LVLYLLQVAAIVLFCSTSSPHSIPLTEVIGPIWLMLLLGTVHCQIVST 151
           L+  LLQ A  VL  S  SP S+ L  ++GP  L  LLG +    V T
Sbjct: 209 LLSALLQSALAVLLLSLPSPLSLLLLRLLGPRLLRPLLGFLGALAVGT 256


>gi|19913369 transducin beta-like 3 [Homo sapiens]
          Length = 808

 Score = 29.6 bits (65), Expect = 4.3
 Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 8/68 (11%)

Query: 198 GTSTSHSVGTVFRDLWHAAFFLSGSKKA--------KNSIDKSTETDNGYVSLDGKKTVK 249
           G+  +HSVGTV       +F ++GS+          K  + K+T  DNG + L  + T +
Sbjct: 417 GSGHTHSVGTVCCSRLKESFLVTGSQDCTVKLWPLPKALLSKNTAPDNGPILLQAQTTQR 476

Query: 250 SGEDGIQN 257
             +  I +
Sbjct: 477 CHDKDINS 484


>gi|82524851 paralemmin 2 isoform a [Homo sapiens]
          Length = 413

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 24/105 (22%), Positives = 45/105 (42%), Gaps = 9/105 (8%)

Query: 203 HSVGTVFRDLWHAAFFLSGSKKAKNSIDKSTETDNGYVSLDGKKTVKSGEDGIQNHEPQC 262
           HS   V R+ W      +G+ + + +  + +E D        +  VK  ED IQ  E + 
Sbjct: 42  HSKSKVLREKWLLQGIPAGTAEEEEARRRQSEED--------EFRVKQLEDNIQRLEQEI 93

Query: 263 ETIRPEETAWNT-GTLRNGPSKDTQRTITNVSDEVSSEEGPETGY 306
           +T+  EE+  +    +     K+T+++  +     SS +G    Y
Sbjct: 94  QTLESEESQISAKEQIILEKLKETEKSFKDFQKGFSSTDGDAVNY 138


>gi|22325356 PALM2-AKAP2 protein isoform 2 [Homo sapiens]
          Length = 1090

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 24/105 (22%), Positives = 45/105 (42%), Gaps = 9/105 (8%)

Query: 203 HSVGTVFRDLWHAAFFLSGSKKAKNSIDKSTETDNGYVSLDGKKTVKSGEDGIQNHEPQC 262
           HS   V R+ W      +G+ + + +  + +E D        +  VK  ED IQ  E + 
Sbjct: 40  HSKSKVLREKWLLQGIPAGTAEEEEARRRQSEED--------EFRVKQLEDNIQRLEQEI 91

Query: 263 ETIRPEETAWNT-GTLRNGPSKDTQRTITNVSDEVSSEEGPETGY 306
           +T+  EE+  +    +     K+T+++  +     SS +G    Y
Sbjct: 92  QTLESEESQISAKEQIILEKLKETEKSFKDFQKGFSSTDGDAVNY 136


>gi|6005709 PALM2-AKAP2 protein isoform 1 [Homo sapiens]
          Length = 1103

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 24/105 (22%), Positives = 45/105 (42%), Gaps = 9/105 (8%)

Query: 203 HSVGTVFRDLWHAAFFLSGSKKAKNSIDKSTETDNGYVSLDGKKTVKSGEDGIQNHEPQC 262
           HS   V R+ W      +G+ + + +  + +E D        +  VK  ED IQ  E + 
Sbjct: 40  HSKSKVLREKWLLQGIPAGTAEEEEARRRQSEED--------EFRVKQLEDNIQRLEQEI 91

Query: 263 ETIRPEETAWNT-GTLRNGPSKDTQRTITNVSDEVSSEEGPETGY 306
           +T+  EE+  +    +     K+T+++  +     SS +G    Y
Sbjct: 92  QTLESEESQISAKEQIILEKLKETEKSFKDFQKGFSSTDGDAVNY 136


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.132    0.404 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,671,822
Number of Sequences: 37866
Number of extensions: 615535
Number of successful extensions: 1870
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 1837
Number of HSP's gapped (non-prelim): 63
length of query: 352
length of database: 18,247,518
effective HSP length: 103
effective length of query: 249
effective length of database: 14,347,320
effective search space: 3572482680
effective search space used: 3572482680
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.