Guide to the Human Genome
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Name: AR Sequence: fasta or formatted (388aa) NCBI GI: 58535455
Description:

androgen receptor isoform 2

Referenced in:

Organs and Hormones
LIM Domain Proteins
Melanoma Antigen Family
Nuclear Receptors

Other entries for this name:
alt prot [920aa] androgen receptor isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7         22           2
 C cysteine            4.1         16           1
 D aspartate           4.1         16           2
 E glutamate           5.9         23           2
 F phenylalanine       5.4         21           2
 G glycine             4.9         19           1
 H histidine           3.1         12           1
 I isoleucine          5.2         20           2
 K lysine              7.0         27           2
 L leucine            10.8         42           3
 M methionine          3.9         15           2
 N asparagine          3.6         14           2
 P proline             4.4         17           2
 Q glutamine           4.9         19           1
 R arginine            5.7         22           2
 S serine              6.7         26           2
 T threonine           4.4         17           2
 V valine              5.7         22           2
 W tryptophan          1.3          5           1
 Y tyrosine            3.4         13           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   androgen receptor isoform 2 
AR                    0.979   androgen receptor isoform 1 
PGR                   0.536   progesterone receptor 
NR3C2                 0.476   nuclear receptor subfamily 3, group C, member 2 [Ho...
NR3C1                 0.472   nuclear receptor subfamily 3, group C, member 1 isof...
NR3C1                 0.472   nuclear receptor subfamily 3, group C, member 1 isof...
NR3C1                 0.472   nuclear receptor subfamily 3, group C, member 1 isof...
NR3C1                 0.472   nuclear receptor subfamily 3, group C, member 1 isof...
NR3C1                 0.472   nuclear receptor subfamily 3, group C, member 1 isofo...
NR3C1                 0.469   nuclear receptor subfamily 3, group C, member 1 isof...
NR3C1                 0.424   nuclear receptor subfamily 3, group C, member 1 isof...
ESR1                  0.171   estrogen receptor alpha isoform 4 
ESR1                  0.171   estrogen receptor alpha isoform 3 
ESR1                  0.171   estrogen receptor alpha isoform 2 
ESR1                  0.171   estrogen receptor alpha isoform 1 
ESR2                  0.171   estrogen receptor beta isoform 2 
ESR2                  0.171   estrogen receptor beta isoform 2 
ESR2                  0.171   estrogen receptor beta isoform 1 
ESRRA                 0.157   estrogen-related receptor alpha 
ESRRG                 0.156   estrogen-related receptor gamma isoform 2 
ESRRG                 0.156   estrogen-related receptor gamma isoform 2 
ESRRG                 0.156   estrogen-related receptor gamma isoform 1 
ESRRG                 0.156   estrogen-related receptor gamma isoform 2 
ESRRB                 0.153   estrogen-related receptor beta 
NR2F6                 0.119   nuclear receptor subfamily 2, group F, member 6 [Hom...
RXRA                  0.117   retinoid X receptor, alpha 
RXRB                  0.117   retinoid X receptor, beta 
RXRG                  0.117   retinoid X receptor, gamma isoform a 
NR2F2                 0.111   nuclear receptor subfamily 2, group F, member 2 isof...
HNF4G                 0.108   hepatocyte nuclear factor 4, gamma 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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