Guide to the Human Genome
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Name: TMEM129 Sequence: fasta or formatted (362aa) NCBI GI: 187936961
Description:

transmembrane protein 129 isoform a

Not currently referenced in the text

Other entries for this name:
alt prot {232aa} transmembrane protein 129 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.0         40           2
 C cysteine            5.0         18           1
 D aspartate           3.3         12           1
 E glutamate           4.7         17           1
 F phenylalanine       4.1         15           1
 G glycine             3.6         13           1
 H histidine           2.8         10           1
 I isoleucine          3.0         11           1
 K lysine              1.9          7           1
 L leucine            11.9         43           3
 M methionine          1.7          6           1
 N asparagine          1.9          7           1
 P proline             5.5         20           1
 Q glutamine           4.7         17           3
 R arginine            6.6         24           2
 S serine              6.6         24           2
 T threonine           7.5         27           2
 V valine              8.6         31           2
 W tryptophan          2.8         10           1
 Y tyrosine            2.8         10           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   transmembrane protein 129 isoform a 
TMEM129               0.604   transmembrane protein 129 isoform b 
KRTAP10-7             0.012   keratin associated protein 10-7 
F5                    0.012   coagulation factor V precursor 
KRTAP10-4             0.012   keratin associated protein 10-4 
KRTAP10-12            0.011   keratin associated protein 10-12 
KRTAP10-11            0.008   keratin associated protein 10-11 
KRTAP10-5             0.007   keratin associated protein 10-5 
KRTAP10-10            0.007   keratin associated protein 10-10 
ARIH2                 0.007   ariadne homolog 2 
RNF5                  0.006   ring finger protein 5 
APOBEC3B              0.006   apolipoprotein B mRNA editing enzyme, catalytic poly...
CLOCK                 0.006   clock 
LOC649201             0.006   PREDICTED: similar to paraneoplastic antigen MA1 [H...
LOC649201             0.006   PREDICTED: similar to paraneoplastic antigen MA1 [H...
LOC649201             0.006   PREDICTED: similar to paraneoplastic antigen MA1 [H...
MKRN2                 0.006   makorin ring finger protein 2 
KRTAP10-1             0.006   keratin associated protein 10-1 
KRTAP10-2             0.006   keratin associated protein 10-2 
KRTAP10-6             0.004   keratin associated protein 10-6 
TRIM37                0.004   tripartite motif-containing 37 protein 
TRIM37                0.004   tripartite motif-containing 37 protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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