Guide to the Human Genome
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Name: TMEM129 Sequence: fasta or formatted (232aa) NCBI GI: 19923909
Description:

transmembrane protein 129 isoform b

Not currently referenced in the text

Other entries for this name:
alt prot {362aa} transmembrane protein 129 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            12.5         29           2
 C cysteine            2.2          5           1
 D aspartate           3.4          8           1
 E glutamate           3.4          8           1
 F phenylalanine       4.7         11           1
 G glycine             3.4          8           1
 H histidine           3.4          8           1
 I isoleucine          3.0          7           1
 K lysine              1.3          3           1
 L leucine            12.9         30           3
 M methionine          1.3          3           1
 N asparagine          2.2          5           1
 P proline             5.6         13           1
 Q glutamine           4.3         10           3
 R arginine            6.0         14           2
 S serine              6.9         16           2
 T threonine           7.8         18           2
 V valine              9.1         21           1
 W tryptophan          3.4          8           1
 Y tyrosine            3.0          7           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   transmembrane protein 129 isoform b 
TMEM129               0.973   transmembrane protein 129 isoform a 
CLOCK                 0.009   clock 
F5                    0.007   coagulation factor V precursor 
SLC22A7               0.007   solute carrier family 22 member 7 isoform b 
SLC22A7               0.007   solute carrier family 22 member 7 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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