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Search of human proteins with 18765735
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|18765735 synaptosomal-associated protein 25 isoform SNAP25B
[Homo sapiens]
(206 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|18765735 synaptosomal-associated protein 25 isoform SNAP25B [... 408 e-114
gi|18765733 synaptosomal-associated protein 25 isoform SNAP25A [... 391 e-109
gi|18765729 synaptosomal-associated protein 23 isoform SNAP23A [... 236 1e-62
gi|18765731 synaptosomal-associated protein 23 isoform SNAP23B [... 193 1e-49
gi|4759154 synaptosomal-associated protein 29 [Homo sapiens] 58 6e-09
gi|115496169 myosin, heavy chain 7, cardiac muscle, beta [Homo s... 49 4e-06
gi|98986453 myosin, heavy chain 3, skeletal muscle, embryonic [H... 48 5e-06
gi|153945790 myosin, heavy chain 8, skeletal muscle, perinatal [... 48 5e-06
gi|153791586 myosin, heavy chain 2, skeletal muscle, adult [Homo... 47 1e-05
gi|153792663 myosin, heavy chain 2, skeletal muscle, adult [Homo... 47 1e-05
gi|156104908 myosin heavy chain 6 [Homo sapiens] 46 2e-05
gi|110611903 myosin, heavy polypeptide 4, skeletal muscle [Homo ... 46 3e-05
gi|115527082 myosin, heavy chain 1, skeletal muscle, adult [Homo... 45 3e-05
gi|110624781 myosin, heavy polypeptide 13, skeletal muscle [Homo... 45 4e-05
gi|4507285 syntaxin 10 [Homo sapiens] 44 7e-05
gi|114155148 tropomyosin 3 isoform 5 [Homo sapiens] 42 4e-04
gi|114155144 tropomyosin 3 isoform 4 [Homo sapiens] 42 4e-04
gi|114842389 myosin, heavy polypeptide 7B, cardiac muscle, beta ... 42 4e-04
gi|5032131 syntaxin 6 [Homo sapiens] 40 0.002
gi|63252904 tropomyosin 1 alpha chain isoform 6 [Homo sapiens] 38 0.007
gi|63252898 tropomyosin 1 alpha chain isoform 1 [Homo sapiens] 38 0.007
gi|63252896 tropomyosin 1 alpha chain isoform 3 [Homo sapiens] 38 0.007
gi|169218106 PREDICTED: hypothetical protein, partial [Homo sapi... 37 0.012
gi|114155146 tropomyosin 3 isoform 3 [Homo sapiens] 37 0.012
gi|114155140 tropomyosin 3 isoform 1 [Homo sapiens] 37 0.012
gi|24119203 tropomyosin 3 isoform 2 [Homo sapiens] 37 0.012
gi|4759188 syntaxin 8 [Homo sapiens] 37 0.012
gi|63252902 tropomyosin 1 alpha chain isoform 2 [Homo sapiens] 37 0.015
gi|239745089 PREDICTED: golgi autoantigen, golgin subfamily a-li... 36 0.020
gi|4503509 eukaryotic translation initiation factor 3, subunit 1... 36 0.026
>gi|18765735 synaptosomal-associated protein 25 isoform SNAP25B
[Homo sapiens]
Length = 206
Score = 408 bits (1048), Expect = e-114
Identities = 206/206 (100%), Positives = 206/206 (100%)
Query: 1 MAEDADMRNELEEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLERI 60
MAEDADMRNELEEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLERI
Sbjct: 1 MAEDADMRNELEEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLERI 60
Query: 61 EEGMDQINKDMKEAEKNLTDLGKFCGLCVCPCNKLKSSDAYKKAWGNNQDGVVASQPARV 120
EEGMDQINKDMKEAEKNLTDLGKFCGLCVCPCNKLKSSDAYKKAWGNNQDGVVASQPARV
Sbjct: 61 EEGMDQINKDMKEAEKNLTDLGKFCGLCVCPCNKLKSSDAYKKAWGNNQDGVVASQPARV 120
Query: 121 VDEREQMAISGGFIRRVTNDARENEMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDR 180
VDEREQMAISGGFIRRVTNDARENEMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDR
Sbjct: 121 VDEREQMAISGGFIRRVTNDARENEMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDR 180
Query: 181 IMEKADSNKTRIDEANQRATKMLGSG 206
IMEKADSNKTRIDEANQRATKMLGSG
Sbjct: 181 IMEKADSNKTRIDEANQRATKMLGSG 206
>gi|18765733 synaptosomal-associated protein 25 isoform SNAP25A
[Homo sapiens]
Length = 206
Score = 391 bits (1004), Expect = e-109
Identities = 197/206 (95%), Positives = 202/206 (98%)
Query: 1 MAEDADMRNELEEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLERI 60
MAEDADMRNELEEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQL+R+
Sbjct: 1 MAEDADMRNELEEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLDRV 60
Query: 61 EEGMDQINKDMKEAEKNLTDLGKFCGLCVCPCNKLKSSDAYKKAWGNNQDGVVASQPARV 120
EEGM+ IN+DMKEAEKNL DLGK CGL +CPCNKLKSSDAYKKAWGNNQDGVVASQPARV
Sbjct: 61 EEGMNHINQDMKEAEKNLKDLGKCCGLFICPCNKLKSSDAYKKAWGNNQDGVVASQPARV 120
Query: 121 VDEREQMAISGGFIRRVTNDARENEMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDR 180
VDEREQMAISGGFIRRVTNDARENEMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDR
Sbjct: 121 VDEREQMAISGGFIRRVTNDARENEMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDR 180
Query: 181 IMEKADSNKTRIDEANQRATKMLGSG 206
IMEKADSNKTRIDEANQRATKMLGSG
Sbjct: 181 IMEKADSNKTRIDEANQRATKMLGSG 206
>gi|18765729 synaptosomal-associated protein 23 isoform SNAP23A
[Homo sapiens]
Length = 211
Score = 236 bits (601), Expect = 1e-62
Identities = 124/205 (60%), Positives = 153/205 (74%), Gaps = 11/205 (5%)
Query: 12 EEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLERIEEGMDQINKDM 71
EE+Q+RA Q+ DESLESTRR+L L ES+DAGI+T+ MLDEQ EQL RIEEG+DQINKDM
Sbjct: 7 EEIQQRAHQITDESLESTRRILGLAIESQDAGIKTITMLDEQKEQLNRIEEGLDQINKDM 66
Query: 72 KEAEKNLTDLGKFCGLCVCPCNKLK---SSDAYKKAWG----NNQDGVVASQPARVVDER 124
+E EK LT+L K CGLCVCPCN+ K S AYK WG N+ VV+ QP V + +
Sbjct: 67 RETEKTLTELNKCCGLCVCPCNRTKNFESGKAYKTTWGDGGENSPCNVVSKQPGPVTNGQ 126
Query: 125 EQM----AISGGFIRRVTNDARENEMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDR 180
Q A SGG+I+R+TNDARE+EM+ENL QV I+GNL+ MAL++GNEID QN QI R
Sbjct: 127 LQQPTTGAASGGYIKRITNDAREDEMEENLTQVGSILGNLKDMALNIGNEIDAQNPQIKR 186
Query: 181 IMEKADSNKTRIDEANQRATKMLGS 205
I +KAD+N+ RID AN RA K++ S
Sbjct: 187 ITDKADTNRDRIDIANARAKKLIDS 211
>gi|18765731 synaptosomal-associated protein 23 isoform SNAP23B
[Homo sapiens]
Length = 158
Score = 193 bits (490), Expect = 1e-49
Identities = 104/194 (53%), Positives = 126/194 (64%), Gaps = 42/194 (21%)
Query: 12 EEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLERIEEGMDQINKDM 71
EE+Q+RA Q+ DESLESTRR+L L ES+DAGI+T+ MLDEQ EQL RIEEG+DQINKDM
Sbjct: 7 EEIQQRAHQITDESLESTRRILGLAIESQDAGIKTITMLDEQKEQLNRIEEGLDQINKDM 66
Query: 72 KEAEKNLTDLGKFCGLCVCPCNKLKSSDAYKKAWGNNQDGVVASQPARVVDEREQMAISG 131
+E EK LT+L K CGLCVCPCN
Sbjct: 67 RETEKTLTELNKCCGLCVCPCNS------------------------------------- 89
Query: 132 GFIRRVTNDARENEMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDRIMEKADSNKTR 191
+TNDARE+EM+ENL QV I+GNL+ MAL++GNEID QN QI RI +KAD+N+ R
Sbjct: 90 -----ITNDAREDEMEENLTQVGSILGNLKDMALNIGNEIDAQNPQIKRITDKADTNRDR 144
Query: 192 IDEANQRATKMLGS 205
ID AN RA K++ S
Sbjct: 145 IDIANARAKKLIDS 158
>gi|4759154 synaptosomal-associated protein 29 [Homo sapiens]
Length = 258
Score = 57.8 bits (138), Expect = 6e-09
Identities = 57/222 (25%), Positives = 99/222 (44%), Gaps = 41/222 (18%)
Query: 12 EEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLERIEEGMDQINKDM 71
+E+ RRA+ A ST R L L+ ES+ G+ + L Q LER E+ +D++++D+
Sbjct: 47 QEVLRRAEATA----ASTSRSLALMYESEKVGVASSEELARQRGVLERTEKMVDKMDQDL 102
Query: 72 KEAEKNLTDLGKFCGLCVCPCNKLKSSDAYKKAWGNNQDGVVASQPARVVDE-----REQ 126
K ++K++ + G V N KS Q+G + SQP + E +EQ
Sbjct: 103 KISQKHINSIKSVFGGLV---NYFKSKPVETPP---EQNGTLTSQPNNRLKEAISTSKEQ 156
Query: 127 MA-----------------ISGGFIRRVTNDAR---------ENEMDENLEQVSGIIGNL 160
A + G ++ DA ++D NL+++S +G L
Sbjct: 157 EAKYQASHPNLRKLDDTDPVPRGAGSAMSTDAYPKNPHLRAYHQKIDSNLDELSMGLGRL 216
Query: 161 RHMALDMGNEIDTQNRQIDRIMEKADSNKTRIDEANQRATKM 202
+ +AL M EI+ Q+ +DR+ K D I ++ ++
Sbjct: 217 KDIALGMQTEIEEQDDILDRLTTKVDKLDVNIKSTERKVRQL 258
>gi|115496169 myosin, heavy chain 7, cardiac muscle, beta [Homo
sapiens]
Length = 1935
Score = 48.5 bits (114), Expect = 4e-06
Identities = 53/218 (24%), Positives = 99/218 (45%), Gaps = 26/218 (11%)
Query: 7 MRNELEEMQ------RRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLE-R 59
++ ELEE++ R+ +LA++ L T +QL+ + I +D QL+
Sbjct: 1681 LQAELEELRAVVEQTERSRKLAEQELIETSERVQLLHSQNTSLINQKKKMDADLSQLQTE 1740
Query: 60 IEEGMDQINKDMKEAEKNLTDLGKFCGLCVCPCNKLKSSDAYKKAWGNNQDGVVASQPAR 119
+EE + + ++A+K +TD + K + + A+ + N + + R
Sbjct: 1741 VEEAVQECRNAEEKAKKAITD----AAMMAEELKKEQDTSAHLERMKKNMEQTIKDLQHR 1796
Query: 120 VVDEREQMAISGGFIRRVTNDAR----ENEMD----ENLEQVSGIIGNLRHM-ALDMGNE 170
+ DE EQ+A+ GG + +AR ENE++ N E V G+ + R + L E
Sbjct: 1797 L-DEAEQIALKGGKKQLQKLEARVRELENELEAEQKRNAESVKGMRKSERRIKELTYQTE 1855
Query: 171 IDTQN-----RQIDRIMEKADSNKTRIDEANQRATKML 203
D +N +D++ K + K + +EA ++A L
Sbjct: 1856 EDRKNLLRLQDLVDKLQLKVKAYKRQAEEAEEQANTNL 1893
>gi|98986453 myosin, heavy chain 3, skeletal muscle, embryonic [Homo
sapiens]
Length = 1940
Score = 48.1 bits (113), Expect = 5e-06
Identities = 55/217 (25%), Positives = 99/217 (45%), Gaps = 21/217 (9%)
Query: 2 AEDADMRNELEEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLE-RI 60
AE ++R LE+ +R A +LA++ L + +QL+ + I T L+ QL+ +
Sbjct: 1684 AEVEELRATLEQTER-ARKLAEQELLDSNERVQLLHTQNTSLIHTKKKLETDLMQLQSEV 1742
Query: 61 EEGMDQINKDMKEAEKNLTDLGKFCGLCVCPCNKLKSSDAYKKAWGNNQDGVVASQPARV 120
E+ ++A+K +TD + K + + A+ + N + V R+
Sbjct: 1743 EDASRDARNAEEKAKKAITD----AAMMAEELKKEQDTSAHLERMKKNLEQTVKDLQHRL 1798
Query: 121 VDEREQMAISGG--FIRRVTNDAR------ENEMDENLEQVSGIIGNLRHM-ALDMGNEI 171
DE EQ+A+ GG I+++ R E E +N E V G+ R + L +E
Sbjct: 1799 -DEAEQLALKGGKKQIQKLETRIRELEFELEGEQKKNTESVKGLRKYERRVKELTYQSEE 1857
Query: 172 DTQN-----RQIDRIMEKADSNKTRIDEANQRATKML 203
D +N +D++ K S K + +EA+++A L
Sbjct: 1858 DRKNVLRLQDLVDKLQVKVKSYKRQAEEADEQANAHL 1894
>gi|153945790 myosin, heavy chain 8, skeletal muscle, perinatal [Homo
sapiens]
Length = 1937
Score = 48.1 bits (113), Expect = 5e-06
Identities = 50/206 (24%), Positives = 90/206 (43%), Gaps = 20/206 (9%)
Query: 13 EMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLE-RIEEGMDQINKDM 71
E R+ ++A++ L +QL+ + I T L+ QL+ +EE + +
Sbjct: 1696 EQTERSRKIAEQELLDASERVQLLHTQNTSLINTKKKLENDVSQLQSEVEEVIQESRNAE 1755
Query: 72 KEAEKNLTDLGKFCGLCVCPCNKLKSSDAYKKAWGNNQDGVVASQPARVVDEREQMAISG 131
++A+K +TD + K + + A+ + N + V R+ DE EQ+A+ G
Sbjct: 1756 EKAKKAITD----AAMMAEELKKEQDTSAHLERMKKNLEQTVKDLQHRL-DEAEQLALKG 1810
Query: 132 GFIRRVTNDAR--------ENEMDENLEQVSGIIGNLRHM-ALDMGNEIDTQN-----RQ 177
G + +AR ENE N E V G+ + R + L E D +N
Sbjct: 1811 GKKQIQKLEARVRELEGEVENEQKRNAEAVKGLRKHERRVKELTYQTEEDRKNVLRLQDL 1870
Query: 178 IDRIMEKADSNKTRIDEANQRATKML 203
+D++ K S K + +EA +++ L
Sbjct: 1871 VDKLQAKVKSYKRQAEEAEEQSNANL 1896
>gi|153791586 myosin, heavy chain 2, skeletal muscle, adult [Homo
sapiens]
Length = 1941
Score = 47.0 bits (110), Expect = 1e-05
Identities = 51/217 (23%), Positives = 98/217 (45%), Gaps = 21/217 (9%)
Query: 2 AEDADMRNELEEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLE-RI 60
AE ++R LE+ +R + ++A++ L +QL+ + I T L+ Q++ +
Sbjct: 1689 AEIEELRATLEQTER-SRKIAEQELLDASERVQLLHTQNTSLINTKKKLETDISQMQGEM 1747
Query: 61 EEGMDQINKDMKEAEKNLTDLGKFCGLCVCPCNKLKSSDAYKKAWGNNQDGVVASQPARV 120
E+ + + ++A+K +TD + K + + A+ + N + V R+
Sbjct: 1748 EDILQEARNAEEKAKKAITD----AAMMAEELKKEQDTSAHLERMKKNMEQTVKDLQLRL 1803
Query: 121 VDEREQMAISGGFIRRVTNDAR--------ENEMDENLEQVSGIIGNLRHM-ALDMGNEI 171
DE EQ+A+ GG + +AR E+E N E V G+ + R + L E
Sbjct: 1804 -DEAEQLALKGGKKQIQKLEARVRELEGEVESEQKRNAEAVKGLRKHERRVKELTYQTEE 1862
Query: 172 DTQN-----RQIDRIMEKADSNKTRIDEANQRATKML 203
D +N +D++ K S K + +EA +++ L
Sbjct: 1863 DRKNILRLQDLVDKLQAKVKSYKRQAEEAEEQSNTNL 1899
>gi|153792663 myosin, heavy chain 2, skeletal muscle, adult [Homo
sapiens]
Length = 1941
Score = 47.0 bits (110), Expect = 1e-05
Identities = 51/217 (23%), Positives = 98/217 (45%), Gaps = 21/217 (9%)
Query: 2 AEDADMRNELEEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLE-RI 60
AE ++R LE+ +R + ++A++ L +QL+ + I T L+ Q++ +
Sbjct: 1689 AEIEELRATLEQTER-SRKIAEQELLDASERVQLLHTQNTSLINTKKKLETDISQMQGEM 1747
Query: 61 EEGMDQINKDMKEAEKNLTDLGKFCGLCVCPCNKLKSSDAYKKAWGNNQDGVVASQPARV 120
E+ + + ++A+K +TD + K + + A+ + N + V R+
Sbjct: 1748 EDILQEARNAEEKAKKAITD----AAMMAEELKKEQDTSAHLERMKKNMEQTVKDLQLRL 1803
Query: 121 VDEREQMAISGGFIRRVTNDAR--------ENEMDENLEQVSGIIGNLRHM-ALDMGNEI 171
DE EQ+A+ GG + +AR E+E N E V G+ + R + L E
Sbjct: 1804 -DEAEQLALKGGKKQIQKLEARVRELEGEVESEQKRNAEAVKGLRKHERRVKELTYQTEE 1862
Query: 172 DTQN-----RQIDRIMEKADSNKTRIDEANQRATKML 203
D +N +D++ K S K + +EA +++ L
Sbjct: 1863 DRKNILRLQDLVDKLQAKVKSYKRQAEEAEEQSNTNL 1899
>gi|156104908 myosin heavy chain 6 [Homo sapiens]
Length = 1939
Score = 46.2 bits (108), Expect = 2e-05
Identities = 51/217 (23%), Positives = 97/217 (44%), Gaps = 21/217 (9%)
Query: 2 AEDADMRNELEEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLE-RI 60
AE ++R +E+ + R+ +LA++ L T +QL+ + I ++ QL+ +
Sbjct: 1685 AELEELRAVVEQTE-RSRKLAEQELIETSERVQLLHSQNTSLINQKKKMESDLTQLQSEV 1743
Query: 61 EEGMDQINKDMKEAEKNLTDLGKFCGLCVCPCNKLKSSDAYKKAWGNNQDGVVASQPARV 120
EE + + ++A+K +TD + K + + A+ + N + + R
Sbjct: 1744 EEAVQECRNAEEKAKKAITD----AAMMAEELKKEQDTSAHLERMKKNMEQTIKDLQHR- 1798
Query: 121 VDEREQMAISGGFIRRVTNDAR--------ENEMDENLEQVSGIIGNLRHM-ALDMGNEI 171
+DE EQ+A+ GG + +AR E E N E V G+ + R + L E
Sbjct: 1799 LDEAEQIALKGGKKQLQKLEARVRELEGELEAEQKRNAESVKGMRKSERRIKELTYQTEE 1858
Query: 172 DTQN-----RQIDRIMEKADSNKTRIDEANQRATKML 203
D +N +D++ K + K + +EA ++A L
Sbjct: 1859 DKKNLLRLQDLVDKLQLKVKAYKRQAEEAEEQANTNL 1895
Score = 28.9 bits (63), Expect = 3.2
Identities = 37/193 (19%), Positives = 74/193 (38%), Gaps = 27/193 (13%)
Query: 5 ADMRNELEEMQRRADQLA-------------DESLESTRRMLQ---LVEESKDAGIRT-- 46
+D+ ELEE+ R ++ + + RR L+ L E+ A +R
Sbjct: 1139 SDLSRELEEISERLEEAGGATSVQIEMNKKREAEFQKMRRDLEEATLQHEATAAALRKKH 1198
Query: 47 LVMLDEQGEQLERIEEGMDQINKDMKEAEKNLTDLGKFCGLCVCPCNKLKSSDAYKKAWG 106
+ E GEQ++ ++ ++ K+ E + L D+ + K+ +K
Sbjct: 1199 ADSVAELGEQIDNLQRVKQKLEKEKSEFKLELDDVTSNMEQII------KAKANLEKVSR 1252
Query: 107 NNQDGVVASQPARVVDEREQMAISGGFIRRVTNDARENEMDENLEQVSGIIGNLRHMALD 166
+D + RV E Q +++ +R E+ LE+ +I L L
Sbjct: 1253 TLED---QANEYRVKLEEAQRSLNDFTTQRAKLQTENGELARQLEEKEALISQLTRGKLS 1309
Query: 167 MGNEIDTQNRQID 179
+++ RQ++
Sbjct: 1310 YTQQMEDLKRQLE 1322
>gi|110611903 myosin, heavy polypeptide 4, skeletal muscle [Homo
sapiens]
Length = 1939
Score = 45.8 bits (107), Expect = 3e-05
Identities = 50/213 (23%), Positives = 96/213 (45%), Gaps = 21/213 (9%)
Query: 2 AEDADMRNELEEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLE-RI 60
AE ++R LE +R E L+++ R+ QL+ + I T L+ Q++ +
Sbjct: 1687 AEVEELRASLERTERGRKMAEQELLDASERV-QLLHTQNTSLINTKKKLETDISQIQGEM 1745
Query: 61 EEGMDQINKDMKEAEKNLTDLGKFCGLCVCPCNKLKSSDAYKKAWGNNQDGVVASQPARV 120
E+ + + ++A+K +TD + K + + A+ + N + V R+
Sbjct: 1746 EDIVQEARNAEEKAKKAITD----AAMMAEELKKEQDTSAHLERMKKNMEQTVKDLQLRL 1801
Query: 121 VDEREQMAISGGFIRRVTNDAR--------ENEMDENLEQVSGIIGNLRHM-ALDMGNEI 171
DE EQ+A+ GG + +AR E+E N+E V G+ + R + L E
Sbjct: 1802 -DEAEQLALKGGKKQIQKLEARVRELESEVESEQKHNVEAVKGLRKHERRVKELTYQTEE 1860
Query: 172 DTQN-----RQIDRIMEKADSNKTRIDEANQRA 199
D +N +D++ K + K + +EA +++
Sbjct: 1861 DRKNILRLQDLVDKLQTKVKAYKRQAEEAEEQS 1893
Score = 27.3 bits (59), Expect = 9.4
Identities = 19/74 (25%), Positives = 37/74 (50%), Gaps = 13/74 (17%)
Query: 8 RNELE-EMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLERIEEGMDQ 66
+N+L+ ++Q AD LAD EE D I+T + L+ + +++ E ++
Sbjct: 888 KNDLQLQVQAEADALAD------------AEERCDQLIKTKIQLEAKIKEVTERAEDEEE 935
Query: 67 INKDMKEAEKNLTD 80
IN ++ ++ L D
Sbjct: 936 INAELTAKKRKLED 949
>gi|115527082 myosin, heavy chain 1, skeletal muscle, adult [Homo
sapiens]
Length = 1939
Score = 45.4 bits (106), Expect = 3e-05
Identities = 50/213 (23%), Positives = 98/213 (46%), Gaps = 21/213 (9%)
Query: 2 AEDADMRNELEEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLE-RI 60
AE ++R LE+ +R + ++A++ L +QL+ + I T L+ Q++ +
Sbjct: 1687 AEIEELRATLEQTER-SRKIAEQELLDASERVQLLHTQNTSLINTKKKLETDISQIQGEM 1745
Query: 61 EEGMDQINKDMKEAEKNLTDLGKFCGLCVCPCNKLKSSDAYKKAWGNNQDGVVASQPARV 120
E+ + + ++A+K +TD + K + + A+ + N + V R+
Sbjct: 1746 EDIIQEARNAEEKAKKAITD----AAMMAEELKKEQDTSAHLERMKKNLEQTVKDLQHRL 1801
Query: 121 VDEREQMAISGGFIRRVTNDAR--------ENEMDENLEQVSGIIGNLRHM-ALDMGNEI 171
DE EQ+A+ GG + +AR E+E N+E V G+ + R + L E
Sbjct: 1802 -DEAEQLALKGGKKQIQKLEARVRELEGEVESEQKRNVEAVKGLRKHERKVKELTYQTEE 1860
Query: 172 DTQN-----RQIDRIMEKADSNKTRIDEANQRA 199
D +N +D++ K S K + +EA +++
Sbjct: 1861 DRKNILRLQDLVDKLQAKVKSYKRQAEEAEEQS 1893
Score = 27.7 bits (60), Expect = 7.2
Identities = 19/74 (25%), Positives = 37/74 (50%), Gaps = 13/74 (17%)
Query: 8 RNELE-EMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLERIEEGMDQ 66
+N+L+ ++Q AD LAD EE D I+T + L+ + +++ E ++
Sbjct: 888 KNDLQLQVQAEADSLAD------------AEERCDQLIKTKIQLEAKIKEVTERAEDEEE 935
Query: 67 INKDMKEAEKNLTD 80
IN ++ ++ L D
Sbjct: 936 INAELTAKKRKLED 949
>gi|110624781 myosin, heavy polypeptide 13, skeletal muscle [Homo
sapiens]
Length = 1938
Score = 45.1 bits (105), Expect = 4e-05
Identities = 49/215 (22%), Positives = 92/215 (42%), Gaps = 26/215 (12%)
Query: 10 ELEEMQ------RRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLE-RIEE 62
ELEEM+ R +L+++ L +QL+ + I T L+ Q + +E
Sbjct: 1688 ELEEMKVALEQTERTRRLSEQELLDASDRVQLLHSQNTSLINTKKKLEADIAQCQAEVEN 1747
Query: 63 GMDQINKDMKEAEKNLTDLGKFCGLCVCPCNKLKSSDAYKKAWGNNQDGVVASQPARVVD 122
+ + ++A+K +TD + K + + A+ + N + V R+ D
Sbjct: 1748 SIQESRNAEEKAKKAITD----AAMMAEELKKEQDTSAHLERMKKNLEQTVKDLQHRL-D 1802
Query: 123 EREQMAISGG--FIRRVTNDARENEMDENLEQVSGI------------IGNLRHMALDMG 168
E EQ+A+ GG I+++ N RE E + ++EQ G + + + A +
Sbjct: 1803 EAEQLALKGGKKQIQKLENRVRELENELDVEQKRGAEALKGAHKYERKVKEMTYQAEEDH 1862
Query: 169 NEIDTQNRQIDRIMEKADSNKTRIDEANQRATKML 203
I +D++ K S K + +EA ++A L
Sbjct: 1863 KNILRLQDLVDKLQAKVKSYKRQAEEAEEQANTQL 1897
>gi|4507285 syntaxin 10 [Homo sapiens]
Length = 249
Score = 44.3 bits (103), Expect = 7e-05
Identities = 28/108 (25%), Positives = 51/108 (47%), Gaps = 11/108 (10%)
Query: 95 LKSSDAYKKAWGNNQDGVVASQPARVVDEREQMAISGGFIRRVTNDARENEMDENLEQVS 154
L A +K+ + D S +R ++E++ T +E D+ LE VS
Sbjct: 123 LAGKPAAQKSPSDLLDASAVSATSRYIEEQQ-----------ATQQLIMDEQDQQLEMVS 171
Query: 155 GIIGNLRHMALDMGNEIDTQNRQIDRIMEKADSNKTRIDEANQRATKM 202
G I L+HM+ +G E+D Q +D ++ D ++R+D ++ K+
Sbjct: 172 GSIQVLKHMSGRVGEELDEQGIMLDAFAQEMDHTQSRMDGVLRKLAKV 219
>gi|114155148 tropomyosin 3 isoform 5 [Homo sapiens]
Length = 247
Score = 42.0 bits (97), Expect = 4e-04
Identities = 48/207 (23%), Positives = 88/207 (42%), Gaps = 20/207 (9%)
Query: 2 AEDADMRNEL----EEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQL 57
A+DA+ R E E +RRA + A+ + S R +QLVEE D R L ++L
Sbjct: 21 ADDAEERAERLQREVEGERRAREQAEAEVASLNRRIQLVEEELD---RAQERLATALQKL 77
Query: 58 ERIEEGMDQINKDMKEAEKNLTDLGKFCGLCVCPCNKLK--SSDAYKKAWGNNQDGVVAS 115
E E+ D+ + MK E + L + K + +A +K + V+
Sbjct: 78 EEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIE 137
Query: 116 QPARVVDEREQMAISGGFIRRVTNDARENEMDENLEQVSGIIGNLRHMALDMGNEIDTQN 175
+ER ++A +++ +E++E L+ V+ + +L A + D
Sbjct: 138 GDLERTEERAELA-----------ESKCSELEEELKNVTNNLKSLEAQAEKYSQKEDKYE 186
Query: 176 RQIDRIMEKADSNKTRIDEANQRATKM 202
+I + +K +TR + A + K+
Sbjct: 187 EEIKILTDKLKEAETRAEFAERSVAKL 213
>gi|114155144 tropomyosin 3 isoform 4 [Homo sapiens]
Length = 248
Score = 42.0 bits (97), Expect = 4e-04
Identities = 48/207 (23%), Positives = 88/207 (42%), Gaps = 20/207 (9%)
Query: 2 AEDADMRNEL----EEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQL 57
A+DA+ R E E +RRA + A+ + S R +QLVEE D R L ++L
Sbjct: 21 ADDAEERAERLQREVEGERRAREQAEAEVASLNRRIQLVEEELD---RAQERLATALQKL 77
Query: 58 ERIEEGMDQINKDMKEAEKNLTDLGKFCGLCVCPCNKLK--SSDAYKKAWGNNQDGVVAS 115
E E+ D+ + MK E + L + K + +A +K + V+
Sbjct: 78 EEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIE 137
Query: 116 QPARVVDEREQMAISGGFIRRVTNDARENEMDENLEQVSGIIGNLRHMALDMGNEIDTQN 175
+ER ++A +++ +E++E L+ V+ + +L A + D
Sbjct: 138 GDLERTEERAELA-----------ESKCSELEEELKNVTNNLKSLEAQAEKYSQKEDKYE 186
Query: 176 RQIDRIMEKADSNKTRIDEANQRATKM 202
+I + +K +TR + A + K+
Sbjct: 187 EEIKILTDKLKEAETRAEFAERSVAKL 213
>gi|114842389 myosin, heavy polypeptide 7B, cardiac muscle, beta [Homo
sapiens]
Length = 1983
Score = 42.0 bits (97), Expect = 4e-04
Identities = 50/217 (23%), Positives = 92/217 (42%), Gaps = 21/217 (9%)
Query: 2 AEDADMRNELEEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLE-RI 60
AE ++R LE+ +R E LE+T R L L+ + L+ QL +
Sbjct: 1732 AELEELRAALEQGERSRRLAEQELLEATER-LNLLHSQNTGLLNQKKKLEADLAQLSGEV 1790
Query: 61 EEGMDQINKDMKEAEKNLTDLGKFCGLCVCPCNKLKSSDAYKKAWGNNQDGVVASQPARV 120
EE + + ++A+K +TD + K + + A+ + + V AR+
Sbjct: 1791 EEAAQERREAEEKAKKAITD----AAMMAEELKKEQDTSAHLERMKKTLEQTVRELQARL 1846
Query: 121 VDEREQMAISGGF--IRRVTNDARENEMDENLEQ------VSGI------IGNLRHMALD 166
+E EQ A+ GG ++++ RE E + + EQ + G+ + L + A +
Sbjct: 1847 -EEAEQAALRGGKKQVQKLEAKVRELEAELDAEQKKHAEALKGVRKHERRVKELAYQAEE 1905
Query: 167 MGNEIDTQNRQIDRIMEKADSNKTRIDEANQRATKML 203
+ +D++ K S K + +EA Q+A L
Sbjct: 1906 DRKNLARMQDLVDKLQSKVKSYKRQFEEAEQQANTNL 1942
Score = 32.0 bits (71), Expect = 0.38
Identities = 50/229 (21%), Positives = 96/229 (41%), Gaps = 35/229 (15%)
Query: 2 AEDADMRNELEEMQRRAD---QLADESLEST--------RRMLQLVEESKDAGIR----- 45
A+ ELEE +++ Q A+E +E+ + L+L ES+D +
Sbjct: 1426 ADAIQRTEELEEAKKKLALRLQEAEEGVEAANAKCSSLEKAKLRLQTESEDVTLELERAT 1485
Query: 46 -TLVMLDEQGEQLERIEEGM----DQINKDMKEAEKNLTDLG-KFCGLCVCPCNKLKSSD 99
LD++ LER E +++ ++++ A++ LG + L L++ +
Sbjct: 1486 SAAAALDKKQRHLERALEERRRQEEEMQRELEAAQRESRGLGTELFRLRHGHEEALEALE 1545
Query: 100 AYKKAWGNNQDGVVASQPARVVDEREQMAISGGFIRRV--TNDARENEMDE---NLEQVS 154
K+ N Q+ + D +Q+++SG I+ + T A E E E LE+
Sbjct: 1546 TLKRENKNLQE--------EISDLTDQVSLSGKSIQELEKTKKALEGEKSEIQAALEEAE 1597
Query: 155 GIIGNLRHMALDMGNEIDTQNRQIDRIMEKADSNKTRIDEANQRATKML 203
G + L + E+ ++DR + + D + +QRA + L
Sbjct: 1598 GALELEETKTLRIQLELSQVKAEVDRKLAEKDEECANLRRNHQRAVESL 1646
Score = 31.2 bits (69), Expect = 0.65
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 5 ADMRNELEEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQ 56
A M+ +++E+Q RA++L +E LE+ R VE+ + R L L E+ E+
Sbjct: 1151 AQMQKKIKELQARAEEL-EEELEAERAARARVEKQRAEAARELEELSERLEE 1201
>gi|5032131 syntaxin 6 [Homo sapiens]
Length = 255
Score = 39.7 bits (91), Expect = 0.002
Identities = 18/58 (31%), Positives = 35/58 (60%)
Query: 145 EMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDRIMEKADSNKTRIDEANQRATKM 202
+ DE LE VSG IG L++M+ +G E++ Q ++ + +S ++R+D ++ K+
Sbjct: 168 QQDEQLELVSGSIGVLKNMSQRIGGELEEQAVMLEDFSHELESTQSRLDNVMKKLAKV 225
>gi|63252904 tropomyosin 1 alpha chain isoform 6 [Homo sapiens]
Length = 245
Score = 37.7 bits (86), Expect = 0.007
Identities = 42/198 (21%), Positives = 83/198 (41%), Gaps = 17/198 (8%)
Query: 7 MRNELEEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLERIEEGMDQ 66
++ EL+ +R+ + A+ + S R +QLVEE D R L ++LE E+ D+
Sbjct: 31 LQRELDH-ERKLRETAEADVASLNRRIQLVEEELD---RAQERLATALQKLEEAEKAADE 86
Query: 67 INKDMKEAEKNLTDLGKFCGLCVCPCNKLK--SSDAYKKAWGNNQDGVVASQPARVVDER 124
+ MK E + + + K + DA +K + V+ +ER
Sbjct: 87 SERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEER 146
Query: 125 EQMAISGGFIRRVTNDARENEMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDRIMEK 184
+++ + + E++E L+ V+ + +L A + D +I + +K
Sbjct: 147 AELS-----------EGKCAELEEELKTVTNNLKSLEAQAEKYSQKEDRYEEEIKVLSDK 195
Query: 185 ADSNKTRIDEANQRATKM 202
+TR + A + TK+
Sbjct: 196 LKEAETRAEFAERSVTKL 213
>gi|63252898 tropomyosin 1 alpha chain isoform 1 [Homo sapiens]
Length = 284
Score = 37.7 bits (86), Expect = 0.007
Identities = 43/199 (21%), Positives = 83/199 (41%), Gaps = 17/199 (8%)
Query: 6 DMRNELEEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLERIEEGMD 65
D + +LE +++A A+ + S R +QLVEE D R L ++LE E+ D
Sbjct: 66 DAQEKLELAEKKATD-AEADVASLNRRIQLVEEELD---RAQERLATALQKLEEAEKAAD 121
Query: 66 QINKDMKEAEKNLTDLGKFCGLCVCPCNKLK--SSDAYKKAWGNNQDGVVASQPARVVDE 123
+ + MK E + + + K + DA +K + V+ +E
Sbjct: 122 ESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEE 181
Query: 124 REQMAISGGFIRRVTNDARENEMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDRIME 183
R +++ + + E++E L+ V+ + +L A + D +I + +
Sbjct: 182 RAELS-----------EGKCAELEEELKTVTNNLKSLEAQAEKYSQKEDRYEEEIKVLSD 230
Query: 184 KADSNKTRIDEANQRATKM 202
K +TR + A + TK+
Sbjct: 231 KLKEAETRAEFAERSVTKL 249
>gi|63252896 tropomyosin 1 alpha chain isoform 3 [Homo sapiens]
Length = 284
Score = 37.7 bits (86), Expect = 0.007
Identities = 43/199 (21%), Positives = 83/199 (41%), Gaps = 17/199 (8%)
Query: 6 DMRNELEEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLERIEEGMD 65
D + +LE +++A A+ + S R +QLVEE D R L ++LE E+ D
Sbjct: 66 DAQEKLELAEKKATD-AEADVASLNRRIQLVEEELD---RAQERLATALQKLEEAEKAAD 121
Query: 66 QINKDMKEAEKNLTDLGKFCGLCVCPCNKLK--SSDAYKKAWGNNQDGVVASQPARVVDE 123
+ + MK E + + + K + DA +K + V+ +E
Sbjct: 122 ESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEE 181
Query: 124 REQMAISGGFIRRVTNDARENEMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDRIME 183
R +++ + + E++E L+ V+ + +L A + D +I + +
Sbjct: 182 RAELS-----------EGKCAELEEELKTVTNNLKSLEAQAEKYSQKEDRYEEEIKVLSD 230
Query: 184 KADSNKTRIDEANQRATKM 202
K +TR + A + TK+
Sbjct: 231 KLKEAETRAEFAERSVTKL 249
>gi|169218106 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 436
Score = 37.0 bits (84), Expect = 0.012
Identities = 36/204 (17%), Positives = 85/204 (41%), Gaps = 17/204 (8%)
Query: 1 MAEDADMRNELEEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLERI 60
M E + E EE ++ ++ E E R+ + + E ++ + + +Q EQ+ +
Sbjct: 201 MGEQEEQMGEQEEQMQKQEEQMGEQEEQMRKQEEQMGEQEEQVQKQEEQVQKQEEQMRKQ 260
Query: 61 EEGMDQINKDMKEAEKNLTDLGKFCGLCVCPCNKLKSSDAYKKAWGNNQDGVVASQPARV 120
EE M + + M+E E+ + K K ++ G Q+ + Q ++
Sbjct: 261 EEQMREQEEQMREQEEQML--------------KQKEQTEQEEQTG-EQEEQMREQEEQM 305
Query: 121 VDEREQMAISGGFIRRVTND--ARENEMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQI 178
++ EQM +R +E +M E EQ+ + MG + + +Q
Sbjct: 306 REQEEQMREQEEQMREQEEQMGKQEEQMWEQKEQMWEQKEQMWKQEEQMGEQEEQMQKQE 365
Query: 179 DRIMEKADSNKTRIDEANQRATKM 202
+++ ++ + + + ++ ++ +M
Sbjct: 366 EQVRKQEEQMRKQEEQMRKQEEQM 389
>gi|114155146 tropomyosin 3 isoform 3 [Homo sapiens]
Length = 247
Score = 37.0 bits (84), Expect = 0.012
Identities = 48/207 (23%), Positives = 83/207 (40%), Gaps = 20/207 (9%)
Query: 2 AEDADMRNEL----EEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQL 57
A+DA+ R E E +RRA + A+ + S R +QLVEE D R L ++L
Sbjct: 21 ADDAEERAERLQREVEGERRAREQAEAEVASLNRRIQLVEEELD---RAQERLATALQKL 77
Query: 58 ERIEEGMDQINKDMKEAEKNLTDLGKFCGLCVCPCNKLK--SSDAYKKAWGNNQDGVVAS 115
E E+ D+ + MK E + L + K + +A +K + V+
Sbjct: 78 EEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIE 137
Query: 116 QPARVVDEREQMAISGGFIRRVTNDARENEMDENLEQVSGIIGNLRHMALDMGNEIDTQN 175
+ER ++A ++R EMDE + + + L + D
Sbjct: 138 GDLERTEERAELA-----------ESRCREMDEQIRLMDQNLKCLSAAEEKYSQKEDKYE 186
Query: 176 RQIDRIMEKADSNKTRIDEANQRATKM 202
+I + +K +TR + A + K+
Sbjct: 187 EEIKILTDKLKEAETRAEFAERSVAKL 213
>gi|114155140 tropomyosin 3 isoform 1 [Homo sapiens]
Length = 285
Score = 37.0 bits (84), Expect = 0.012
Identities = 43/199 (21%), Positives = 84/199 (42%), Gaps = 17/199 (8%)
Query: 6 DMRNELEEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLERIEEGMD 65
D + +LE +++A A+ + S R +QLVEE D R L ++LE E+ D
Sbjct: 67 DAQEKLELAEKKAAD-AEAEVASLNRRIQLVEEELD---RAQERLATALQKLEEAEKAAD 122
Query: 66 QINKDMKEAEKNLTDLGKFCGLCVCPCNKLK--SSDAYKKAWGNNQDGVVASQPARVVDE 123
+ + MK E + L + K + +A +K + V+ +E
Sbjct: 123 ESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTEE 182
Query: 124 REQMAISGGFIRRVTNDARENEMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDRIME 183
R ++A +++ +E++E L+ V+ + +L A + D +I + +
Sbjct: 183 RAELA-----------ESKCSELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKILTD 231
Query: 184 KADSNKTRIDEANQRATKM 202
K +TR + A + K+
Sbjct: 232 KLKEAETRAEFAERSVAKL 250
>gi|24119203 tropomyosin 3 isoform 2 [Homo sapiens]
Length = 248
Score = 37.0 bits (84), Expect = 0.012
Identities = 48/207 (23%), Positives = 83/207 (40%), Gaps = 20/207 (9%)
Query: 2 AEDADMRNEL----EEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQL 57
A+DA+ R E E +RRA + A+ + S R +QLVEE D R L ++L
Sbjct: 21 ADDAEERAERLQREVEGERRAREQAEAEVASLNRRIQLVEEELD---RAQERLATALQKL 77
Query: 58 ERIEEGMDQINKDMKEAEKNLTDLGKFCGLCVCPCNKLK--SSDAYKKAWGNNQDGVVAS 115
E E+ D+ + MK E + L + K + +A +K + V+
Sbjct: 78 EEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIE 137
Query: 116 QPARVVDEREQMAISGGFIRRVTNDARENEMDENLEQVSGIIGNLRHMALDMGNEIDTQN 175
+ER ++A ++R EMDE + + + L + D
Sbjct: 138 GDLERTEERAELA-----------ESRCREMDEQIRLMDQNLKCLSAAEEKYSQKEDKYE 186
Query: 176 RQIDRIMEKADSNKTRIDEANQRATKM 202
+I + +K +TR + A + K+
Sbjct: 187 EEIKILTDKLKEAETRAEFAERSVAKL 213
>gi|4759188 syntaxin 8 [Homo sapiens]
Length = 236
Score = 37.0 bits (84), Expect = 0.012
Identities = 44/199 (22%), Positives = 83/199 (41%), Gaps = 16/199 (8%)
Query: 1 MAEDADMRNELEEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLERI 60
+AE RN+ E +A +L + R +LQ ++E K A ++ L++ Q+ ++
Sbjct: 20 IAEKIQQRNQYERKGEKAPKLT----VTIRALLQNLKE-KIALLKDLLLRAVSTHQITQL 74
Query: 61 EEGMDQ-INKDMKEAEKNLTDLGKFCGLCVCPCNKLKSSDAYKKAWGNNQDGVVASQPAR 119
E Q + D+ E+ L K N+ D + + + + A P
Sbjct: 75 EGDRRQNLLDDLVTRERLLLASFK---------NEGAEPDLIRSSLMSEEAKRGAPNPWL 125
Query: 120 VVDEREQMAISGGFIRRVTNDARENEMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQID 179
+ E + IR+ + E D L+ +S II + M ++GNE+D QN ID
Sbjct: 126 FEEPEETRGLGFDEIRQQQQKIIQ-EQDAGLDALSSIISRQKQMGQEIGNELDEQNEIID 184
Query: 180 RIMEKADSNKTRIDEANQR 198
+ ++ ++ +R
Sbjct: 185 DLANLVENTDEKLRNETRR 203
>gi|63252902 tropomyosin 1 alpha chain isoform 2 [Homo sapiens]
Length = 284
Score = 36.6 bits (83), Expect = 0.015
Identities = 44/203 (21%), Positives = 81/203 (39%), Gaps = 25/203 (12%)
Query: 11 LEEMQRRADQL---------ADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLERIE 61
LEE+ + D L A+ + S R +QLVEE D R L ++LE E
Sbjct: 61 LEELHKAEDSLLAAEEAAAKAEADVASLNRRIQLVEEELD---RAQERLATALQKLEEAE 117
Query: 62 EGMDQINKDMKEAEKNLTDLGKFCGLCVCPCNKLK--SSDAYKKAWGNNQDGVVASQPAR 119
+ D+ + MK E + + + K + DA +K + V+
Sbjct: 118 KAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLE 177
Query: 120 VVDEREQMAISGGFIRRVTNDARENEMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQID 179
+ER +++ + + E++E L+ V+ + +L A + D +I
Sbjct: 178 RAEERAELS-----------EGKCAELEEELKTVTNNLKSLEAQAEKYSQKEDRYEEEIK 226
Query: 180 RIMEKADSNKTRIDEANQRATKM 202
+ +K +TR + A + TK+
Sbjct: 227 VLSDKLKEAETRAEFAERSVTKL 249
>gi|239745089 PREDICTED: golgi autoantigen, golgin subfamily a-like
[Homo sapiens]
Length = 828
Score = 36.2 bits (82), Expect = 0.020
Identities = 42/192 (21%), Positives = 77/192 (40%), Gaps = 31/192 (16%)
Query: 3 EDADMRNELEEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLERIEE 62
++ MR + E+M+R+ +L ++ E + +L E+ K L EQ EQ++ EE
Sbjct: 267 QEGKMREQEEKMRRQEKRLREQEKELREQEKELREQKK---------LREQEEQMQEQEE 317
Query: 63 GMDQINKDMKEAEKNLTDLGKFCGLCVCPCNKLKSSDAYKKAWGNNQDGVVASQPARVVD 122
M + + M+E E+ K ++ W Q+ + Q ++ D
Sbjct: 318 KMWEQEEKMREQEE-------------------KMWRQEERLW--EQEKQMREQEQKMRD 356
Query: 123 EREQMAISGGFIRRVTNDARENEMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDRIM 182
+ E+M +R RE E E+ +R M E +T Q ++ M
Sbjct: 357 QEERMWEQDERLREKEERMREQEKMWEQEEKMQEEERIREREKKMREEEETMREQEEK-M 415
Query: 183 EKADSNKTRIDE 194
+K + N +E
Sbjct: 416 QKQEENMWEQEE 427
>gi|4503509 eukaryotic translation initiation factor 3, subunit 10
theta, 150/170kDa [Homo sapiens]
Length = 1382
Score = 35.8 bits (81), Expect = 0.026
Identities = 44/209 (21%), Positives = 84/209 (40%), Gaps = 20/209 (9%)
Query: 2 AEDADMRNELEEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQ---GEQLE 58
A++ + L+E ++ + E LE ++ + KD I L LD +Q+E
Sbjct: 616 AKEREKERILQEHEQIKKKTVRERLEQIKKTELGAKAFKDIDIEDLEELDPDFIMAKQVE 675
Query: 59 RIEEGMDQINKDMKEAEKNLTDLGKFCGLCVCPCNKLKSSDAYKKAWGNNQDGVVASQPA 118
++E+ ++ + +K EK + + L P K AY++ + D +
Sbjct: 676 QLEKEKKELQERLKNQEKKIDYFERAKRLEEIPLIK----SAYEEQRIKDMDLWEQQEEE 731
Query: 119 RVVD---EREQMAISGGFIRRVTND----------ARENEMDENLEQVSGIIGNLRHMAL 165
R+ ERE+ + R+ D AR++ +E L+Q + RH L
Sbjct: 732 RITTMQLEREKALEHKNRMSRMLEDRDLFVMRLKAARQSVYEEKLKQFEERLAEERHNRL 791
Query: 166 DMGNEIDTQNRQIDRIMEKADSNKTRIDE 194
+ + R+I EK + + R +E
Sbjct: 792 EERKRQRKEERRITYYREKEEEEQRRAEE 820
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.129 0.351
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,441,736
Number of Sequences: 37866
Number of extensions: 258199
Number of successful extensions: 1567
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 142
Number of HSP's that attempted gapping in prelim test: 1302
Number of HSP's gapped (non-prelim): 427
length of query: 206
length of database: 18,247,518
effective HSP length: 97
effective length of query: 109
effective length of database: 14,574,516
effective search space: 1588622244
effective search space used: 1588622244
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.