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Search of human proteins with 187608738
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|187608738 zinc finger protein 9 isoform 4 [Homo sapiens]
(172 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|187608738 zinc finger protein 9 isoform 4 [Homo sapiens] 390 e-109
gi|187608744 zinc finger protein 9 isoform 5 [Homo sapiens] 384 e-107
gi|187608726 zinc finger protein 9 isoform 1 [Homo sapiens] 383 e-107
gi|187608750 zinc finger protein 9 isoform 6 [Homo sapiens] 381 e-106
gi|187608732 zinc finger protein 9 isoform 2 [Homo sapiens] 377 e-105
gi|4827071 zinc finger protein 9 isoform 3 [Homo sapiens] 374 e-104
gi|42558260 zinc finger, CCHC domain containing 13 [Homo sapiens] 218 2e-57
gi|110815844 zinc finger, CCHC domain containing 7 [Homo sapiens] 69 2e-12
gi|196259805 zinc finger, CCHC domain containing 9 [Homo sapiens] 55 4e-08
gi|196259803 zinc finger, CCHC domain containing 9 [Homo sapiens] 55 4e-08
gi|14150027 zinc finger, CCHC domain containing 9 [Homo sapiens] 55 4e-08
gi|29648305 zinc finger, CCHC domain containing 3 [Homo sapiens] 54 5e-08
gi|190610025 zinc finger protein 93 homolog [Homo sapiens] 46 2e-05
gi|57863250 zinc finger, CCHC domain containing 11 isoform c [Ho... 45 2e-05
gi|221139779 zinc finger protein 534 isoform 2 [Homo sapiens] 45 4e-05
gi|221139777 zinc finger protein 534 isoform 1 [Homo sapiens] 45 4e-05
gi|147905620 PR domain containing 9 [Homo sapiens] 45 4e-05
gi|239753095 PREDICTED: similar to hCG1725380 [Homo sapiens] 42 3e-04
gi|239747658 PREDICTED: similar to hCG1725380 [Homo sapiens] 42 3e-04
gi|239741529 PREDICTED: similar to hCG1725380 [Homo sapiens] 42 3e-04
gi|57863246 zinc finger, CCHC domain containing 11 isoform b [Ho... 42 3e-04
gi|57863248 zinc finger, CCHC domain containing 11 isoform a [Ho... 42 3e-04
gi|169170082 PREDICTED: hypothetical protein LOC728927 [Homo sap... 41 4e-04
gi|169170430 PREDICTED: similar to hCG40110 [Homo sapiens] 41 4e-04
gi|169171772 PREDICTED: similar to hCG40110 [Homo sapiens] 40 8e-04
gi|169172289 PREDICTED: similar to hCG40110 [Homo sapiens] 40 8e-04
gi|224177533 zinc finger protein LOC400713 [Homo sapiens] 40 8e-04
gi|189571667 zinc finger protein 696 [Homo sapiens] 40 0.001
gi|58331272 zinc finger, CCHC domain containing 6 [Homo sapiens] 39 0.002
gi|169213834 PREDICTED: similar to hCG36734 [Homo sapiens] 39 0.003
>gi|187608738 zinc finger protein 9 isoform 4 [Homo sapiens]
Length = 172
Score = 390 bits (1001), Expect = e-109
Identities = 172/172 (100%), Positives = 172/172 (100%)
Query: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDC 60
MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDC
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDC 60
Query: 61 DLQEDVEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEF 120
DLQEDVEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEF
Sbjct: 61 DLQEDVEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEF 120
Query: 121 GHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA 172
GHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA
Sbjct: 121 GHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA 172
>gi|187608744 zinc finger protein 9 isoform 5 [Homo sapiens]
Length = 171
Score = 384 bits (985), Expect = e-107
Identities = 171/172 (99%), Positives = 171/172 (99%), Gaps = 1/172 (0%)
Query: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDC 60
MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDC
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDC 60
Query: 61 DLQEDVEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEF 120
DLQED EACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEF
Sbjct: 61 DLQED-EACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEF 119
Query: 121 GHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA 172
GHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA
Sbjct: 120 GHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA 171
>gi|187608726 zinc finger protein 9 isoform 1 [Homo sapiens]
Length = 179
Score = 383 bits (983), Expect = e-107
Identities = 172/179 (96%), Positives = 172/179 (96%), Gaps = 7/179 (3%)
Query: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRG-------FQFVSSSLPDICYRCGES 53
MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRG FQFVSSSLPDICYRCGES
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGES 60
Query: 54 GHLAKDCDLQEDVEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQK 113
GHLAKDCDLQEDVEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQK
Sbjct: 61 GHLAKDCDLQEDVEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQK 120
Query: 114 CYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA 172
CYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA
Sbjct: 121 CYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA 179
>gi|187608750 zinc finger protein 9 isoform 6 [Homo sapiens]
Length = 170
Score = 381 bits (979), Expect = e-106
Identities = 170/172 (98%), Positives = 170/172 (98%), Gaps = 2/172 (1%)
Query: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDC 60
MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDC
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDC 60
Query: 61 DLQEDVEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEF 120
DLQED ACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEF
Sbjct: 61 DLQED--ACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEF 118
Query: 121 GHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA 172
GHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA
Sbjct: 119 GHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA 170
>gi|187608732 zinc finger protein 9 isoform 2 [Homo sapiens]
Length = 178
Score = 377 bits (967), Expect = e-105
Identities = 171/179 (95%), Positives = 171/179 (95%), Gaps = 8/179 (4%)
Query: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRG-------FQFVSSSLPDICYRCGES 53
MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRG FQFVSSSLPDICYRCGES
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGES 60
Query: 54 GHLAKDCDLQEDVEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQK 113
GHLAKDCDLQED EACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQK
Sbjct: 61 GHLAKDCDLQED-EACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQK 119
Query: 114 CYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA 172
CYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA
Sbjct: 120 CYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA 178
>gi|4827071 zinc finger protein 9 isoform 3 [Homo sapiens]
Length = 177
Score = 374 bits (961), Expect = e-104
Identities = 170/179 (94%), Positives = 170/179 (94%), Gaps = 9/179 (5%)
Query: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRG-------FQFVSSSLPDICYRCGES 53
MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRG FQFVSSSLPDICYRCGES
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGES 60
Query: 54 GHLAKDCDLQEDVEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQK 113
GHLAKDCDLQED ACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQK
Sbjct: 61 GHLAKDCDLQED--ACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQK 118
Query: 114 CYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA 172
CYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA
Sbjct: 119 CYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA 177
>gi|42558260 zinc finger, CCHC domain containing 13 [Homo sapiens]
Length = 166
Score = 218 bits (555), Expect = 2e-57
Identities = 99/147 (67%), Positives = 109/147 (74%), Gaps = 2/147 (1%)
Query: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDC 60
MSS + F CG SGHWAR CP GG GR GRG Q S++L CY CGESG AK+C
Sbjct: 1 MSSKDFFACGHSGHWARGCPRGGAGGRRGGGHGRGSQCGSTTLSYTCYCCGESGRNAKNC 60
Query: 61 DLQEDVEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEF 120
L ++ CYNCGR GHIAKDCK+PKRER Q CY CG+ GHLARDCD EQKCYSCG+
Sbjct: 61 VLLGNI--CYNCGRSGHIAKDCKDPKRERRQHCYTCGRLGHLARDCDRQKEQKCYSCGKL 118
Query: 121 GHIQKDCTKVKCYRCGETGHVAINCSK 147
GHIQKDC +VKCYRCGE GHVAINCSK
Sbjct: 119 GHIQKDCAQVKCYRCGEIGHVAINCSK 145
Score = 35.0 bits (79), Expect = 0.032
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Query: 115 YSCGEFGHIQKDCTKVKC--YRCGETGHVAINCSKTSEVNCYRCGESGHLARECTI 168
++CG GH + C + R G G + S T CY CGESG A+ C +
Sbjct: 7 FACGHSGHWARGCPRGGAGGRRGGGHGRGSQCGSTTLSYTCYCCGESGRNAKNCVL 62
>gi|110815844 zinc finger, CCHC domain containing 7 [Homo sapiens]
Length = 543
Score = 69.3 bits (168), Expect = 2e-12
Identities = 42/145 (28%), Positives = 61/145 (42%), Gaps = 14/145 (9%)
Query: 30 RSRGRGFQ-FVSSSLPDICYRCGESGHLAKDCDLQEDVEACYNCGRGGHIAKDCKEPKRE 88
R+ GR Q + S++ IC C + GHL+K+C L V C+ C R GH+ C P
Sbjct: 225 RTPGRWTQRYYSANKNIICRNCDKRGHLSKNCPLPRKVRRCFLCSRRGHLLYSCPAP--- 281
Query: 89 REQCCYNCGKPGHLARDC--DHADEQKCYSCGEFGHIQKDCTKV-----KCYRCGETGHV 141
C C P L C H+ +++C C GH CT++ + G
Sbjct: 282 ---LCEYCPVPKMLDHSCLFRHSWDKQCDRCHMLGHYTDACTEIWRQYHLTTKPGPPKKP 338
Query: 142 AINCSKTSEVNCYRCGESGHLAREC 166
++ CY C + GH EC
Sbjct: 339 KTPSRPSALAYCYHCAQKGHYGHEC 363
Score = 26.9 bits (58), Expect = 8.7
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 6 CFKCGRSGHWARECP 20
C+ C + GH+ ECP
Sbjct: 350 CYHCAQKGHYGHECP 364
>gi|196259805 zinc finger, CCHC domain containing 9 [Homo sapiens]
Length = 271
Score = 54.7 bits (130), Expect = 4e-08
Identities = 33/107 (30%), Positives = 47/107 (43%), Gaps = 23/107 (21%)
Query: 83 KEPKREREQCCYNCGKPGHLARDCDHADEQK------CYSCGEFGH-IQKDCTKV----- 130
++ ++ C++C KPGH DC A E + CY CG H I K KV
Sbjct: 120 RQAAKKNAMVCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALG 179
Query: 131 -----KCYRCGETGHVAINCSKTSE------VNCYRCGESGHLAREC 166
KC+ CGE GH++ +C + C CG HL ++C
Sbjct: 180 EFPFAKCFVCGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEHLKKDC 226
Score = 53.9 bits (128), Expect = 7e-08
Identities = 31/98 (31%), Positives = 43/98 (43%), Gaps = 16/98 (16%)
Query: 46 ICYRCGESGHLAKDCDLQEDVE-----ACYNCGRGGHIAKDCK---EPKREREQC--CYN 95
+C+ C + GH DC + + CY CG H CK +P C+
Sbjct: 129 VCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFAKCFV 188
Query: 96 CGKPGHLARDCD------HADEQKCYSCGEFGHIQKDC 127
CG+ GHL+R C +AD C CG H++KDC
Sbjct: 189 CGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEHLKKDC 226
Score = 44.3 bits (103), Expect = 5e-05
Identities = 27/89 (30%), Positives = 36/89 (40%), Gaps = 17/89 (19%)
Query: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDC 60
M + C++CG + H +C G F F C+ CGE GHL++ C
Sbjct: 152 MGTGICYRCGSTEHEITKCKAKVDPALG------EFPFAK------CFVCGEMGHLSRSC 199
Query: 61 -----DLQEDVEACYNCGRGGHIAKDCKE 84
L D C CG H+ KDC E
Sbjct: 200 PDNPKGLYADGGGCKLCGSVEHLKKDCPE 228
Score = 41.6 bits (96), Expect = 3e-04
Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 14/70 (20%)
Query: 5 ECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDCDLQE 64
+CF CG GH +R CP +G+ + G G C CG HL KDC +
Sbjct: 185 KCFVCGEMGHLSRSCP---DNPKGLYADGGG-----------CKLCGSVEHLKKDCPESQ 230
Query: 65 DVEACYNCGR 74
+ E GR
Sbjct: 231 NSERMVTVGR 240
>gi|196259803 zinc finger, CCHC domain containing 9 [Homo sapiens]
Length = 271
Score = 54.7 bits (130), Expect = 4e-08
Identities = 33/107 (30%), Positives = 47/107 (43%), Gaps = 23/107 (21%)
Query: 83 KEPKREREQCCYNCGKPGHLARDCDHADEQK------CYSCGEFGH-IQKDCTKV----- 130
++ ++ C++C KPGH DC A E + CY CG H I K KV
Sbjct: 120 RQAAKKNAMVCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALG 179
Query: 131 -----KCYRCGETGHVAINCSKTSE------VNCYRCGESGHLAREC 166
KC+ CGE GH++ +C + C CG HL ++C
Sbjct: 180 EFPFAKCFVCGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEHLKKDC 226
Score = 53.9 bits (128), Expect = 7e-08
Identities = 31/98 (31%), Positives = 43/98 (43%), Gaps = 16/98 (16%)
Query: 46 ICYRCGESGHLAKDCDLQEDVE-----ACYNCGRGGHIAKDCK---EPKREREQC--CYN 95
+C+ C + GH DC + + CY CG H CK +P C+
Sbjct: 129 VCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFAKCFV 188
Query: 96 CGKPGHLARDCD------HADEQKCYSCGEFGHIQKDC 127
CG+ GHL+R C +AD C CG H++KDC
Sbjct: 189 CGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEHLKKDC 226
Score = 44.3 bits (103), Expect = 5e-05
Identities = 27/89 (30%), Positives = 36/89 (40%), Gaps = 17/89 (19%)
Query: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDC 60
M + C++CG + H +C G F F C+ CGE GHL++ C
Sbjct: 152 MGTGICYRCGSTEHEITKCKAKVDPALG------EFPFAK------CFVCGEMGHLSRSC 199
Query: 61 -----DLQEDVEACYNCGRGGHIAKDCKE 84
L D C CG H+ KDC E
Sbjct: 200 PDNPKGLYADGGGCKLCGSVEHLKKDCPE 228
Score = 41.6 bits (96), Expect = 3e-04
Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 14/70 (20%)
Query: 5 ECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDCDLQE 64
+CF CG GH +R CP +G+ + G G C CG HL KDC +
Sbjct: 185 KCFVCGEMGHLSRSCP---DNPKGLYADGGG-----------CKLCGSVEHLKKDCPESQ 230
Query: 65 DVEACYNCGR 74
+ E GR
Sbjct: 231 NSERMVTVGR 240
>gi|14150027 zinc finger, CCHC domain containing 9 [Homo sapiens]
Length = 271
Score = 54.7 bits (130), Expect = 4e-08
Identities = 33/107 (30%), Positives = 47/107 (43%), Gaps = 23/107 (21%)
Query: 83 KEPKREREQCCYNCGKPGHLARDCDHADEQK------CYSCGEFGH-IQKDCTKV----- 130
++ ++ C++C KPGH DC A E + CY CG H I K KV
Sbjct: 120 RQAAKKNAMVCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALG 179
Query: 131 -----KCYRCGETGHVAINCSKTSE------VNCYRCGESGHLAREC 166
KC+ CGE GH++ +C + C CG HL ++C
Sbjct: 180 EFPFAKCFVCGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEHLKKDC 226
Score = 53.9 bits (128), Expect = 7e-08
Identities = 31/98 (31%), Positives = 43/98 (43%), Gaps = 16/98 (16%)
Query: 46 ICYRCGESGHLAKDCDLQEDVE-----ACYNCGRGGHIAKDCK---EPKREREQC--CYN 95
+C+ C + GH DC + + CY CG H CK +P C+
Sbjct: 129 VCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFAKCFV 188
Query: 96 CGKPGHLARDCD------HADEQKCYSCGEFGHIQKDC 127
CG+ GHL+R C +AD C CG H++KDC
Sbjct: 189 CGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEHLKKDC 226
Score = 44.3 bits (103), Expect = 5e-05
Identities = 27/89 (30%), Positives = 36/89 (40%), Gaps = 17/89 (19%)
Query: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDC 60
M + C++CG + H +C G F F C+ CGE GHL++ C
Sbjct: 152 MGTGICYRCGSTEHEITKCKAKVDPALG------EFPFAK------CFVCGEMGHLSRSC 199
Query: 61 -----DLQEDVEACYNCGRGGHIAKDCKE 84
L D C CG H+ KDC E
Sbjct: 200 PDNPKGLYADGGGCKLCGSVEHLKKDCPE 228
Score = 41.6 bits (96), Expect = 3e-04
Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 14/70 (20%)
Query: 5 ECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDCDLQE 64
+CF CG GH +R CP +G+ + G G C CG HL KDC +
Sbjct: 185 KCFVCGEMGHLSRSCP---DNPKGLYADGGG-----------CKLCGSVEHLKKDCPESQ 230
Query: 65 DVEACYNCGR 74
+ E GR
Sbjct: 231 NSERMVTVGR 240
>gi|29648305 zinc finger, CCHC domain containing 3 [Homo sapiens]
Length = 403
Score = 54.3 bits (129), Expect = 5e-08
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 114 CYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 166
C+ CG H+ CT+ +C+RCGE GH++ C K + C CG+ GH +C
Sbjct: 335 CFKCGSRTHMSGSCTQDRCFRCGEEGHLSPYCRK--GIVCNLCGKRGHAFAQC 385
Score = 51.2 bits (121), Expect = 4e-07
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Query: 93 CYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTK-VKCYRCGETGHVAINCSKT--S 149
C+ CG H++ C + +C+ CGE GH+ C K + C CG+ GH C K +
Sbjct: 335 CFKCGSRTHMSGSCT---QDRCFRCGEEGHLSPYCRKGIVCNLCGKRGHAFAQCPKAVHN 391
Query: 150 EVNCYRCGESGH 161
V G +GH
Sbjct: 392 SVAAQLTGVAGH 403
Score = 45.4 bits (106), Expect = 2e-05
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 10/76 (13%)
Query: 34 RGFQFVSSSLPDICYRCGESGHLAKDCDLQEDVEACYNCGRGGHIAKDCKEPKREREQCC 93
RG+ + P C++CG H++ C + C+ CG GH++ C+ + C
Sbjct: 323 RGYSWYKGQ-PKTCFKCGSRTHMSGSCTQ----DRCFRCGEEGHLSPYCR-----KGIVC 372
Query: 94 YNCGKPGHLARDCDHA 109
CGK GH C A
Sbjct: 373 NLCGKRGHAFAQCPKA 388
Score = 39.7 bits (91), Expect = 0.001
Identities = 23/77 (29%), Positives = 27/77 (35%), Gaps = 26/77 (33%)
Query: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDCDLQED 65
CFKCG H + C D C+RCGE GHL+ C
Sbjct: 335 CFKCGSRTHMSGSCTQ-----------------------DRCFRCGEEGHLSPYC---RK 368
Query: 66 VEACYNCGRGGHIAKDC 82
C CG+ GH C
Sbjct: 369 GIVCNLCGKRGHAFAQC 385
Score = 28.1 bits (61), Expect = 3.9
Identities = 14/59 (23%), Positives = 20/59 (33%), Gaps = 22/59 (37%)
Query: 2 SSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDC 60
+ + CF+CG GH + C G +C CG+ GH C
Sbjct: 349 TQDRCFRCGEEGHLSPYCRKG----------------------IVCNLCGKRGHAFAQC 385
>gi|190610025 zinc finger protein 93 homolog [Homo sapiens]
Length = 738
Score = 45.8 bits (107), Expect = 2e-05
Identities = 44/185 (23%), Positives = 69/185 (37%), Gaps = 36/185 (19%)
Query: 8 KCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCG----ESGHLAKDCDLQ 63
+ G+ +W EC G + +++ R + P C+ CG +S HL +
Sbjct: 313 RTGKKRYWCHECGKGFSQSSNLQTHQR---VHTGEKPYTCHECGKSFNQSSHLYAHLPIH 369
Query: 64 --EDVEACYNCGRGGHIAKD----CKEPKREREQCCYNCGKPGHLARDCDHADE-----Q 112
E C +CG+G + D C+ E+ C CGK G R A E +
Sbjct: 370 TGEKPYRCDSCGKGFSRSTDLNIHCRVHTGEKPYKCEVCGK-GFTQRSHLQAHERIHTGE 428
Query: 113 KCYSCGEFG-------------HIQKDCTKVKCYRCGETGHVAINCSKTSEVNC----YR 155
K Y CG+ G + + KC CG+ ++ N V+ Y+
Sbjct: 429 KPYKCGDCGKRFSCSSNLHTHQRVHTEEKPYKCDECGKCFSLSFNLHSHQRVHTGEKPYK 488
Query: 156 CGESG 160
C E G
Sbjct: 489 CEECG 493
>gi|57863250 zinc finger, CCHC domain containing 11 isoform c [Homo
sapiens]
Length = 1640
Score = 45.4 bits (106), Expect = 2e-05
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 15/91 (16%)
Query: 59 DCDLQEDVEACYNCGRGGHIAKDCKEPKR-------------EREQCCYNCGKPG--HLA 103
D +L + C CG+ GH KDC + KR E E+ + P H
Sbjct: 1285 DGELAPNDRCCRVCGKIGHYMKDCPKRKRLKKKDSEEEKEGNEEEKDSRDVLDPRDLHDT 1344
Query: 104 RDCDHADEQKCYSCGEFGHIQKDCTKVKCYR 134
RD + +C+ CG+ GH++++C +VK R
Sbjct: 1345 RDFRDPRDLRCFICGDAGHVRRECPEVKLAR 1375
Score = 39.7 bits (91), Expect = 0.001
Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 16/85 (18%)
Query: 90 EQCCYNCGKPGHLARDCDH--------ADEQKCYSCGEFGHIQKDCTKVKCYRCGETGHV 141
++CC CGK GH +DC ++E+K E +KD V R H
Sbjct: 1292 DRCCRVCGKIGHYMKDCPKRKRLKKKDSEEEK-----EGNEEEKDSRDVLDPR---DLHD 1343
Query: 142 AINCSKTSEVNCYRCGESGHLAREC 166
+ ++ C+ CG++GH+ REC
Sbjct: 1344 TRDFRDPRDLRCFICGDAGHVRREC 1368
Score = 33.5 bits (75), Expect = 0.093
Identities = 22/87 (25%), Positives = 38/87 (43%), Gaps = 5/87 (5%)
Query: 6 CFKCGRSGHWARECPTGGG-RGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDCDLQE 64
C CG+ GH+ ++CP + + G + S + R H +D
Sbjct: 1295 CRVCGKIGHYMKDCPKRKRLKKKDSEEEKEGNEEEKDSRDVLDPR---DLHDTRDFRDPR 1351
Query: 65 DVEACYNCGRGGHIAKDCKEPKREREQ 91
D+ C+ CG GH+ ++C E K R++
Sbjct: 1352 DLR-CFICGDAGHVRRECPEVKLARQR 1377
>gi|221139779 zinc finger protein 534 isoform 2 [Homo sapiens]
Length = 674
Score = 44.7 bits (104), Expect = 4e-05
Identities = 41/147 (27%), Positives = 57/147 (38%), Gaps = 34/147 (23%)
Query: 48 YRCGESG-------HLAKDCDLQ--EDVEACYNCG----RGGHIAKDCKEPKREREQCCY 94
Y+C E G HLA+ D+ E +C CG R H+ + E+ C
Sbjct: 507 YKCNECGKVFRQNSHLAQHRDIHTGEKPYSCNECGKVFRRNSHLVRHRNVHTGEKPYSCN 566
Query: 95 NCGKP----GHLARDCDHADEQKCYSCGEFGHI----------QKDCTKVKCYRCGETGH 140
CGK HLAR + +K +SC E G + +K T K Y+C E
Sbjct: 567 ECGKVFSRNSHLARHRNIHTGEKPHSCNECGKVFSRNSHLARHRKIHTGEKLYKCNECSK 626
Query: 141 VAINCSKTSE-------VNCYRCGESG 160
V S+ ++ V Y C E G
Sbjct: 627 VFSRNSRLAQHRNIHTGVKPYSCNECG 653
Score = 39.3 bits (90), Expect = 0.002
Identities = 34/139 (24%), Positives = 57/139 (41%), Gaps = 18/139 (12%)
Query: 44 PDICYRCGE----SGHLAKDCDLQ--EDVEACYNCG----RGGHIAKDCKEPKREREQCC 93
P C CG+ + HL + ++ E +C CG R H+A+ E+ C
Sbjct: 534 PYSCNECGKVFRRNSHLVRHRNVHTGEKPYSCNECGKVFSRNSHLARHRNIHTGEKPHSC 593
Query: 94 YNCGKP----GHLARDCDHADEQKCYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTS 149
CGK HLAR +K Y C E + +++ +R TG +C++
Sbjct: 594 NECGKVFSRNSHLARHRKIHTGEKLYKCNECSKVFSRNSRLAQHRNIHTGVKPYSCNECG 653
Query: 150 EVNCYRCGESGHLARECTI 168
+V ++ L + C+I
Sbjct: 654 KV----FSKNSILVQHCSI 668
Score = 38.9 bits (89), Expect = 0.002
Identities = 43/178 (24%), Positives = 57/178 (32%), Gaps = 34/178 (19%)
Query: 23 GGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDCD----------------LQEDV 66
GGR G+ F+ S + GE + DC E
Sbjct: 419 GGRRYKCNECGKAFRTCSDLTAHLLIHTGEKPYECIDCGKVFRHKSSLTYHCRIHTGEKP 478
Query: 67 EACYNCGR----GGHIAKDCKEPKREREQCCYNCGKP----GHLARDCDHADEQKCYSCG 118
C CG+ ++ + K E+ C CGK HLA+ D +K YSC
Sbjct: 479 YKCNECGKVFSQNSNLQRHRKIHTGEKLYKCNECGKVFRQNSHLAQHRDIHTGEKPYSCN 538
Query: 119 EFGHI----------QKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 166
E G + + T K Y C E G V S + GE H EC
Sbjct: 539 ECGKVFRRNSHLVRHRNVHTGEKPYSCNECGKVFSRNSHLARHRNIHTGEKPHSCNEC 596
Score = 30.0 bits (66), Expect = 1.0
Identities = 29/101 (28%), Positives = 38/101 (37%), Gaps = 21/101 (20%)
Query: 88 EREQCCYNCGK-----PGHLARDCDHADEQ--KCYSCGE-FGHI------QKDCTKVKCY 133
E+ C CGK H E+ KC CG+ F I +K T K Y
Sbjct: 336 EKPYDCKECGKVFRHKSSLTTHQTVHTGERPYKCNECGKGFSRIAFLARHRKVHTGEKPY 395
Query: 134 RCGETGHVAINCSKTSE-------VNCYRCGESGHLARECT 167
+C E G V I S+ + Y+C E G R C+
Sbjct: 396 KCNECGKVFIGNSRLARHRKIHTGGRRYKCNECGKAFRTCS 436
Score = 27.7 bits (60), Expect = 5.1
Identities = 37/157 (23%), Positives = 53/157 (33%), Gaps = 30/157 (19%)
Query: 28 GMRSRGRGFQFVSSSLP--------DICYRCGESGHLAKDCDLQEDVEACYNCGRGGHIA 79
G G+ F+ VSSSL D Y+C + G + N H
Sbjct: 200 GCNEHGKVFR-VSSSLTNRQVIHIADKTYKCSDCGEIFSS-----------NSNFAQHQR 247
Query: 80 KDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHI----------QKDCTK 129
E + +C + HLA+ QK Y+ E G + +K T
Sbjct: 248 IHTGEKPYKYNECGKVFNQNSHLAQHQKIHTGQKPYNNKECGKVFSHHAYLAQHRKIHTG 307
Query: 130 VKCYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 166
K Y+C E G CS + GE + +EC
Sbjct: 308 EKPYKCSECGKAFSVCSSLTAHLVIHTGEKPYDCKEC 344
>gi|221139777 zinc finger protein 534 isoform 1 [Homo sapiens]
Length = 661
Score = 44.7 bits (104), Expect = 4e-05
Identities = 41/147 (27%), Positives = 57/147 (38%), Gaps = 34/147 (23%)
Query: 48 YRCGESG-------HLAKDCDLQ--EDVEACYNCG----RGGHIAKDCKEPKREREQCCY 94
Y+C E G HLA+ D+ E +C CG R H+ + E+ C
Sbjct: 494 YKCNECGKVFRQNSHLAQHRDIHTGEKPYSCNECGKVFRRNSHLVRHRNVHTGEKPYSCN 553
Query: 95 NCGKP----GHLARDCDHADEQKCYSCGEFGHI----------QKDCTKVKCYRCGETGH 140
CGK HLAR + +K +SC E G + +K T K Y+C E
Sbjct: 554 ECGKVFSRNSHLARHRNIHTGEKPHSCNECGKVFSRNSHLARHRKIHTGEKLYKCNECSK 613
Query: 141 VAINCSKTSE-------VNCYRCGESG 160
V S+ ++ V Y C E G
Sbjct: 614 VFSRNSRLAQHRNIHTGVKPYSCNECG 640
Score = 39.3 bits (90), Expect = 0.002
Identities = 34/139 (24%), Positives = 57/139 (41%), Gaps = 18/139 (12%)
Query: 44 PDICYRCGE----SGHLAKDCDLQ--EDVEACYNCG----RGGHIAKDCKEPKREREQCC 93
P C CG+ + HL + ++ E +C CG R H+A+ E+ C
Sbjct: 521 PYSCNECGKVFRRNSHLVRHRNVHTGEKPYSCNECGKVFSRNSHLARHRNIHTGEKPHSC 580
Query: 94 YNCGKP----GHLARDCDHADEQKCYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTS 149
CGK HLAR +K Y C E + +++ +R TG +C++
Sbjct: 581 NECGKVFSRNSHLARHRKIHTGEKLYKCNECSKVFSRNSRLAQHRNIHTGVKPYSCNECG 640
Query: 150 EVNCYRCGESGHLARECTI 168
+V ++ L + C+I
Sbjct: 641 KV----FSKNSILVQHCSI 655
Score = 38.9 bits (89), Expect = 0.002
Identities = 43/178 (24%), Positives = 57/178 (32%), Gaps = 34/178 (19%)
Query: 23 GGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDCD----------------LQEDV 66
GGR G+ F+ S + GE + DC E
Sbjct: 406 GGRRYKCNECGKAFRTCSDLTAHLLIHTGEKPYECIDCGKVFRHKSSLTYHCRIHTGEKP 465
Query: 67 EACYNCGR----GGHIAKDCKEPKREREQCCYNCGKP----GHLARDCDHADEQKCYSCG 118
C CG+ ++ + K E+ C CGK HLA+ D +K YSC
Sbjct: 466 YKCNECGKVFSQNSNLQRHRKIHTGEKLYKCNECGKVFRQNSHLAQHRDIHTGEKPYSCN 525
Query: 119 EFGHI----------QKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 166
E G + + T K Y C E G V S + GE H EC
Sbjct: 526 ECGKVFRRNSHLVRHRNVHTGEKPYSCNECGKVFSRNSHLARHRNIHTGEKPHSCNEC 583
Score = 30.0 bits (66), Expect = 1.0
Identities = 29/101 (28%), Positives = 38/101 (37%), Gaps = 21/101 (20%)
Query: 88 EREQCCYNCGK-----PGHLARDCDHADEQ--KCYSCGE-FGHI------QKDCTKVKCY 133
E+ C CGK H E+ KC CG+ F I +K T K Y
Sbjct: 323 EKPYDCKECGKVFRHKSSLTTHQTVHTGERPYKCNECGKGFSRIAFLARHRKVHTGEKPY 382
Query: 134 RCGETGHVAINCSKTSE-------VNCYRCGESGHLARECT 167
+C E G V I S+ + Y+C E G R C+
Sbjct: 383 KCNECGKVFIGNSRLARHRKIHTGGRRYKCNECGKAFRTCS 423
Score = 27.7 bits (60), Expect = 5.1
Identities = 37/157 (23%), Positives = 53/157 (33%), Gaps = 30/157 (19%)
Query: 28 GMRSRGRGFQFVSSSLP--------DICYRCGESGHLAKDCDLQEDVEACYNCGRGGHIA 79
G G+ F+ VSSSL D Y+C + G + N H
Sbjct: 187 GCNEHGKVFR-VSSSLTNRQVIHIADKTYKCSDCGEIFSS-----------NSNFAQHQR 234
Query: 80 KDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHI----------QKDCTK 129
E + +C + HLA+ QK Y+ E G + +K T
Sbjct: 235 IHTGEKPYKYNECGKVFNQNSHLAQHQKIHTGQKPYNNKECGKVFSHHAYLAQHRKIHTG 294
Query: 130 VKCYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 166
K Y+C E G CS + GE + +EC
Sbjct: 295 EKPYKCSECGKAFSVCSSLTAHLVIHTGEKPYDCKEC 331
>gi|147905620 PR domain containing 9 [Homo sapiens]
Length = 894
Score = 44.7 bits (104), Expect = 4e-05
Identities = 55/201 (27%), Positives = 69/201 (34%), Gaps = 41/201 (20%)
Query: 6 CFKCGRSGHWARECPTG-----GGRGRGMRSRGRGFQFVSSSL----------PDICYRC 50
C +CGR W T G + R GRGF + S L P +C C
Sbjct: 666 CRECGRGFSWQSVLLTHQRTHTGEKPYVCRECGRGFSWQSVLLTHQRTHTGEKPYVCREC 725
Query: 51 GES----GHLAKD--CDLQEDVEACYNCGRG----GHIAKDCKEPKREREQCCYNCG--- 97
G HL + E C CGRG H+ + + E+ C CG
Sbjct: 726 GRGFSNKSHLLRHQRTHTGEKPYVCRECGRGFRDKSHLLRHQRTHTGEKPYVCRECGRGF 785
Query: 98 --KPGHLARDCDHADEQKCYSCGEFG-------HI---QKDCTKVKCYRCGETGHVAINC 145
K L+ H E K Y C E G H+ Q+ T K Y C E G N
Sbjct: 786 RDKSNLLSHQRTHTGE-KPYVCRECGRGFSNKSHLLRHQRTHTGEKPYVCRECGRGFRNK 844
Query: 146 SKTSEVNCYRCGESGHLAREC 166
S GE ++ REC
Sbjct: 845 SHLLRHQRTHTGEKPYVCREC 865
Score = 33.9 bits (76), Expect = 0.071
Identities = 48/201 (23%), Positives = 62/201 (30%), Gaps = 41/201 (20%)
Query: 6 CFKCGRSGHWARECPTG-----GGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDC 60
C +CGR W G + R GRGF + S L GE ++ ++C
Sbjct: 554 CRECGRGFSWKSHLLIHQRIHTGEKPYVCRECGRGFSWQSVLLTHQRTHTGEKPYVCREC 613
Query: 61 D----------------LQEDVEACYNCGRG----GHIAKDCKEPKREREQCCYNCGKPG 100
E C CGRG + + E+ C CG+
Sbjct: 614 GRGFSRQSVLLTHQRRHTGEKPYVCRECGRGFSRQSVLLTHQRRHTGEKPYVCRECGRGF 673
Query: 101 H-----LARDCDHADEQKCYSCGEFGH----------IQKDCTKVKCYRCGETGHVAINC 145
L H E K Y C E G Q+ T K Y C E G N
Sbjct: 674 SWQSVLLTHQRTHTGE-KPYVCRECGRGFSWQSVLLTHQRTHTGEKPYVCRECGRGFSNK 732
Query: 146 SKTSEVNCYRCGESGHLAREC 166
S GE ++ REC
Sbjct: 733 SHLLRHQRTHTGEKPYVCREC 753
>gi|239753095 PREDICTED: similar to hCG1725380 [Homo sapiens]
Length = 583
Score = 42.0 bits (97), Expect = 3e-04
Identities = 38/141 (26%), Positives = 51/141 (36%), Gaps = 31/141 (21%)
Query: 44 PDICYRCGESGH------LAKDCDLQEDVEACYNCGRGGHIAKDCKEPKR----EREQCC 93
P C CG++ + L K E C CG+ + + + KR E+ C
Sbjct: 447 PHKCEECGKAFNWFSYLTLHKRIHTGEKPYKCDECGKAFNQCSNLTKHKRIHTGEKPYKC 506
Query: 94 YNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTS---- 149
CGK + C H E K GE K Y+C E G V I+CS S
Sbjct: 507 EECGKAFNR---CSHLTEHKRIHTGE-----------KPYKCEECGKVFISCSSLSNHKR 552
Query: 150 ---EVNCYRCGESGHLARECT 167
CY+ E G C+
Sbjct: 553 IHTREKCYKSEECGKTFNHCS 573
Score = 34.7 bits (78), Expect = 0.042
Identities = 29/116 (25%), Positives = 44/116 (37%), Gaps = 18/116 (15%)
Query: 69 CYNCGRGGHIAKDCKEPKR----EREQCCYNCGKP-GHLARDCDHA---DEQKCYSCGEF 120
C C +I+ +R E+ C CGK H + +H +E+K Y C E
Sbjct: 338 CKECDNSFYISSVLTPLQRIHTAEKSYKCKQCGKAFRHCSCFLEHETIHNEEKHYKCKEC 397
Query: 121 GHIQKDCTKV----------KCYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 166
G + K T + K Y+C E G + S ++ G+ H EC
Sbjct: 398 GKVFKSFTSLSNHIIIHTGEKLYKCEECGKAFNHSSNHAKHKKIHTGQKPHKCEEC 453
>gi|239747658 PREDICTED: similar to hCG1725380 [Homo sapiens]
Length = 583
Score = 42.0 bits (97), Expect = 3e-04
Identities = 38/141 (26%), Positives = 51/141 (36%), Gaps = 31/141 (21%)
Query: 44 PDICYRCGESGH------LAKDCDLQEDVEACYNCGRGGHIAKDCKEPKR----EREQCC 93
P C CG++ + L K E C CG+ + + + KR E+ C
Sbjct: 447 PHKCEECGKAFNWFSYLTLHKRIHTGEKPYKCDECGKAFNQCSNLTKHKRIHTGEKPYKC 506
Query: 94 YNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTS---- 149
CGK + C H E K GE K Y+C E G V I+CS S
Sbjct: 507 EECGKAFNR---CSHLTEHKRIHTGE-----------KPYKCEECGKVFISCSSLSNHKR 552
Query: 150 ---EVNCYRCGESGHLARECT 167
CY+ E G C+
Sbjct: 553 IHTREKCYKSEECGKTFNHCS 573
Score = 34.7 bits (78), Expect = 0.042
Identities = 29/116 (25%), Positives = 44/116 (37%), Gaps = 18/116 (15%)
Query: 69 CYNCGRGGHIAKDCKEPKR----EREQCCYNCGKP-GHLARDCDHA---DEQKCYSCGEF 120
C C +I+ +R E+ C CGK H + +H +E+K Y C E
Sbjct: 338 CKECDNSFYISSVLTPLQRIHTAEKSYKCKQCGKAFRHCSCFLEHETIHNEEKHYKCKEC 397
Query: 121 GHIQKDCTKV----------KCYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 166
G + K T + K Y+C E G + S ++ G+ H EC
Sbjct: 398 GKVFKSFTSLSNHIIIHTGKKLYKCEECGKAFNHSSNHAKHKKIHTGQKPHKCEEC 453
>gi|239741529 PREDICTED: similar to hCG1725380 [Homo sapiens]
Length = 583
Score = 42.0 bits (97), Expect = 3e-04
Identities = 38/141 (26%), Positives = 51/141 (36%), Gaps = 31/141 (21%)
Query: 44 PDICYRCGESGH------LAKDCDLQEDVEACYNCGRGGHIAKDCKEPKR----EREQCC 93
P C CG++ + L K E C CG+ + + + KR E+ C
Sbjct: 447 PHKCEECGKAFNWFSYLTLHKRIHTGEKPYKCDECGKAFNQCSNLTKHKRIHTGEKPYKC 506
Query: 94 YNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTS---- 149
CGK + C H E K GE K Y+C E G V I+CS S
Sbjct: 507 EECGKAFNR---CSHLTEHKRIHTGE-----------KPYKCEECGKVFISCSSLSNHKR 552
Query: 150 ---EVNCYRCGESGHLARECT 167
CY+ E G C+
Sbjct: 553 IHTREKCYKSEECGKTFNHCS 573
Score = 34.7 bits (78), Expect = 0.042
Identities = 29/116 (25%), Positives = 44/116 (37%), Gaps = 18/116 (15%)
Query: 69 CYNCGRGGHIAKDCKEPKR----EREQCCYNCGKP-GHLARDCDHA---DEQKCYSCGEF 120
C C +I+ +R E+ C CGK H + +H +E+K Y C E
Sbjct: 338 CKECDNSFYISSVLTPLQRIHTAEKSYKCKQCGKAFRHCSCFLEHETIHNEEKHYKCKEC 397
Query: 121 GHIQKDCTKV----------KCYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 166
G + K T + K Y+C E G + S ++ G+ H EC
Sbjct: 398 GKVFKSFTSLSNHIIIHTGKKLYKCEECGKAFNHSSNHAKHKKIHTGQKPHKCEEC 453
>gi|57863246 zinc finger, CCHC domain containing 11 isoform b [Homo
sapiens]
Length = 1644
Score = 42.0 bits (97), Expect = 3e-04
Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 11/92 (11%)
Query: 47 CYRCGESGHLAKDCDLQEDVEACYNCGRGGHIAKDCKEPK--REREQCCYNCGKPG--HL 102
C CG+ GH KDC ++ + KD +E K E E+ + P H
Sbjct: 1295 CRVCGKIGHYMKDCPKRKSLLFRLK-------KKDSEEEKEGNEEEKDSRDVLDPRDLHD 1347
Query: 103 ARDCDHADEQKCYSCGEFGHIQKDCTKVKCYR 134
RD + +C+ CG+ GH++++C +VK R
Sbjct: 1348 TRDFRDPRDLRCFICGDAGHVRRECPEVKLAR 1379
Score = 38.1 bits (87), Expect = 0.004
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 20/89 (22%)
Query: 90 EQCCYNCGKPGHLARDCDH------------ADEQKCYSCGEFGHIQKDCTKVKCYRCGE 137
++CC CGK GH +DC ++E+K E +KD V R
Sbjct: 1292 DRCCRVCGKIGHYMKDCPKRKSLLFRLKKKDSEEEK-----EGNEEEKDSRDVLDPR--- 1343
Query: 138 TGHVAINCSKTSEVNCYRCGESGHLAREC 166
H + ++ C+ CG++GH+ REC
Sbjct: 1344 DLHDTRDFRDPRDLRCFICGDAGHVRREC 1372
Score = 32.7 bits (73), Expect = 0.16
Identities = 22/91 (24%), Positives = 38/91 (41%), Gaps = 9/91 (9%)
Query: 6 CFKCGRSGHWARECPTGGG-----RGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDC 60
C CG+ GH+ ++CP + + G + S + R H +D
Sbjct: 1295 CRVCGKIGHYMKDCPKRKSLLFRLKKKDSEEEKEGNEEEKDSRDVLDPR---DLHDTRDF 1351
Query: 61 DLQEDVEACYNCGRGGHIAKDCKEPKREREQ 91
D+ C+ CG GH+ ++C E K R++
Sbjct: 1352 RDPRDLR-CFICGDAGHVRRECPEVKLARQR 1381
>gi|57863248 zinc finger, CCHC domain containing 11 isoform a [Homo
sapiens]
Length = 1645
Score = 41.6 bits (96), Expect = 3e-04
Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 10/92 (10%)
Query: 47 CYRCGESGHLAKDCDLQEDVEACYNCGRGGHIAKDCKEPK--REREQCCYNCGKPG--HL 102
C CG+ GH KDC ++ + + KD +E K E E+ + P H
Sbjct: 1295 CRVCGKIGHYMKDCPKRKS-SLLFRLKK-----KDSEEEKEGNEEEKDSRDVLDPRDLHD 1348
Query: 103 ARDCDHADEQKCYSCGEFGHIQKDCTKVKCYR 134
RD + +C+ CG+ GH++++C +VK R
Sbjct: 1349 TRDFRDPRDLRCFICGDAGHVRRECPEVKLAR 1380
Score = 37.7 bits (86), Expect = 0.005
Identities = 23/85 (27%), Positives = 35/85 (41%), Gaps = 11/85 (12%)
Query: 90 EQCCYNCGKPGHLARDCDHADEQKCYSCG--------EFGHIQKDCTKVKCYRCGETGHV 141
++CC CGK GH +DC + E +KD V R H
Sbjct: 1292 DRCCRVCGKIGHYMKDCPKRKSSLLFRLKKKDSEEEKEGNEEEKDSRDVLDPR---DLHD 1348
Query: 142 AINCSKTSEVNCYRCGESGHLAREC 166
+ ++ C+ CG++GH+ REC
Sbjct: 1349 TRDFRDPRDLRCFICGDAGHVRREC 1373
Score = 32.3 bits (72), Expect = 0.21
Identities = 22/92 (23%), Positives = 38/92 (41%), Gaps = 10/92 (10%)
Query: 6 CFKCGRSGHWARECPTGGG------RGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKD 59
C CG+ GH+ ++CP + + G + S + R H +D
Sbjct: 1295 CRVCGKIGHYMKDCPKRKSSLLFRLKKKDSEEEKEGNEEEKDSRDVLDPR---DLHDTRD 1351
Query: 60 CDLQEDVEACYNCGRGGHIAKDCKEPKREREQ 91
D+ C+ CG GH+ ++C E K R++
Sbjct: 1352 FRDPRDLR-CFICGDAGHVRRECPEVKLARQR 1382
>gi|169170082 PREDICTED: hypothetical protein LOC728927 [Homo
sapiens]
Length = 427
Score = 41.2 bits (95), Expect = 4e-04
Identities = 44/145 (30%), Positives = 56/145 (38%), Gaps = 33/145 (22%)
Query: 33 GRGFQFVS--SSLPDI-----CYRCGESGHLAKDCDLQED---------VEACYNCGRGG 76
GRGFQ S + DI C++C E G KDC L D VE CY C G
Sbjct: 151 GRGFQLCSIFTEHKDIFSREKCHKCEECG---KDCRLFSDFTRHKKIHTVERCYKCEECG 207
Query: 77 HIAK---DCKEPKR----EREQCCYNCGKPGHLARDC-----DHADEQ--KCYSCGEFGH 122
K + E KR E+ C CGK + +H ++ KC CG+
Sbjct: 208 KAFKKFSNLTEHKRVHTGEKPYKCEGCGKTFTCSSTLVKHKRNHTGDRPYKCEECGKAFK 267
Query: 123 IQKDCTKVKCYRCGETGHVAINCSK 147
D T K GE + C+K
Sbjct: 268 CFSDLTNHKRIHTGEKPYKCEECNK 292
Score = 35.4 bits (80), Expect = 0.024
Identities = 28/102 (27%), Positives = 36/102 (35%), Gaps = 18/102 (17%)
Query: 69 CYNCGRGGHIAKDCKEPKR--EREQC--CYNCGKPGHLARDCDHADEQKCYSCGEFGHIQ 124
C CGRG + E K RE+C C CGK C +F +
Sbjct: 147 CNKCGRGFQLCSIFTEHKDIFSREKCHKCEECGKD--------------CRLFSDFTRHK 192
Query: 125 KDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 166
K T +CY+C E G S +E GE + C
Sbjct: 193 KIHTVERCYKCEECGKAFKKFSNLTEHKRVHTGEKPYKCEGC 234
Score = 33.9 bits (76), Expect = 0.071
Identities = 28/109 (25%), Positives = 38/109 (34%), Gaps = 19/109 (17%)
Query: 47 CYRCGESGHLA------KDCDLQEDVEACYNCGRGGHIAKD-CKEPKREREQCCYNCGKP 99
C +CG L KD +E C CG+ + D + K + CY C +
Sbjct: 147 CNKCGRGFQLCSIFTEHKDIFSREKCHKCEECGKDCRLFSDFTRHKKIHTVERCYKCEEC 206
Query: 100 GHLARDCDHADEQKCYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKT 148
G + + E K GE KC CG+T CS T
Sbjct: 207 GKAFKKFSNLTEHKRVHTGE--------KPYKCEGCGKT----FTCSST 243
>gi|169170430 PREDICTED: similar to hCG40110 [Homo sapiens]
Length = 427
Score = 41.2 bits (95), Expect = 4e-04
Identities = 44/145 (30%), Positives = 56/145 (38%), Gaps = 33/145 (22%)
Query: 33 GRGFQFVS--SSLPDI-----CYRCGESGHLAKDCDLQED---------VEACYNCGRGG 76
GRGFQ S + DI C++C E G KDC L D VE CY C G
Sbjct: 151 GRGFQLCSIFTEHKDIFSREKCHKCEECG---KDCRLFSDFTRHKKIHTVERCYKCEECG 207
Query: 77 HIAK---DCKEPKR----EREQCCYNCGKPGHLARDC-----DHADEQ--KCYSCGEFGH 122
K + E KR E+ C CGK + +H ++ KC CG+
Sbjct: 208 KAFKKFSNLTEHKRVHTGEKPYKCEGCGKTFTCSSTLVKHKRNHTGDRPYKCEECGKAFK 267
Query: 123 IQKDCTKVKCYRCGETGHVAINCSK 147
D T K GE + C+K
Sbjct: 268 CFSDLTNHKRIHTGEKPYKCEECNK 292
Score = 35.4 bits (80), Expect = 0.024
Identities = 28/102 (27%), Positives = 36/102 (35%), Gaps = 18/102 (17%)
Query: 69 CYNCGRGGHIAKDCKEPKR--EREQC--CYNCGKPGHLARDCDHADEQKCYSCGEFGHIQ 124
C CGRG + E K RE+C C CGK C +F +
Sbjct: 147 CNKCGRGFQLCSIFTEHKDIFSREKCHKCEECGKD--------------CRLFSDFTRHK 192
Query: 125 KDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 166
K T +CY+C E G S +E GE + C
Sbjct: 193 KIHTVERCYKCEECGKAFKKFSNLTEHKRVHTGEKPYKCEGC 234
Score = 33.9 bits (76), Expect = 0.071
Identities = 28/109 (25%), Positives = 38/109 (34%), Gaps = 19/109 (17%)
Query: 47 CYRCGESGHLA------KDCDLQEDVEACYNCGRGGHIAKD-CKEPKREREQCCYNCGKP 99
C +CG L KD +E C CG+ + D + K + CY C +
Sbjct: 147 CNKCGRGFQLCSIFTEHKDIFSREKCHKCEECGKDCRLFSDFTRHKKIHTVERCYKCEEC 206
Query: 100 GHLARDCDHADEQKCYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKT 148
G + + E K GE KC CG+T CS T
Sbjct: 207 GKAFKKFSNLTEHKRVHTGE--------KPYKCEGCGKT----FTCSST 243
>gi|169171772 PREDICTED: similar to hCG40110 [Homo sapiens]
Length = 427
Score = 40.4 bits (93), Expect = 8e-04
Identities = 44/145 (30%), Positives = 56/145 (38%), Gaps = 33/145 (22%)
Query: 33 GRGFQFVS--SSLPDI-----CYRCGESGHLAKDCDLQED---------VEACYNCGRGG 76
GRGFQ S + DI C++C E G KDC L D VE CY C G
Sbjct: 151 GRGFQLCSIFTEHKDIFSREKCHKCEECG---KDCRLFSDFTRHKKIHTVERCYKCEECG 207
Query: 77 HIAK---DCKEPKR----EREQCCYNCGKPGHLARDC-----DHADEQ--KCYSCGEFGH 122
K + E KR E+ C CGK + +H ++ KC CG+
Sbjct: 208 KEFKKFSNLTEHKRVHTGEKPYKCEGCGKTFTCSSTLVKHKRNHTGDRPYKCEECGKAFK 267
Query: 123 IQKDCTKVKCYRCGETGHVAINCSK 147
D T K GE + C+K
Sbjct: 268 CFSDLTNHKRIHTGEKPYKCEECNK 292
Score = 34.7 bits (78), Expect = 0.042
Identities = 28/102 (27%), Positives = 36/102 (35%), Gaps = 18/102 (17%)
Query: 69 CYNCGRGGHIAKDCKEPKR--EREQC--CYNCGKPGHLARDCDHADEQKCYSCGEFGHIQ 124
C CGRG + E K RE+C C CGK C +F +
Sbjct: 147 CNKCGRGFQLCSIFTEHKDIFSREKCHKCEECGKD--------------CRLFSDFTRHK 192
Query: 125 KDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 166
K T +CY+C E G S +E GE + C
Sbjct: 193 KIHTVERCYKCEECGKEFKKFSNLTEHKRVHTGEKPYKCEGC 234
Score = 33.1 bits (74), Expect = 0.12
Identities = 28/109 (25%), Positives = 38/109 (34%), Gaps = 19/109 (17%)
Query: 47 CYRCGESGHLA------KDCDLQEDVEACYNCGRGGHIAKD-CKEPKREREQCCYNCGKP 99
C +CG L KD +E C CG+ + D + K + CY C +
Sbjct: 147 CNKCGRGFQLCSIFTEHKDIFSREKCHKCEECGKDCRLFSDFTRHKKIHTVERCYKCEEC 206
Query: 100 GHLARDCDHADEQKCYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKT 148
G + + E K GE KC CG+T CS T
Sbjct: 207 GKEFKKFSNLTEHKRVHTGE--------KPYKCEGCGKT----FTCSST 243
>gi|169172289 PREDICTED: similar to hCG40110 [Homo sapiens]
Length = 427
Score = 40.4 bits (93), Expect = 8e-04
Identities = 44/145 (30%), Positives = 56/145 (38%), Gaps = 33/145 (22%)
Query: 33 GRGFQFVS--SSLPDI-----CYRCGESGHLAKDCDLQED---------VEACYNCGRGG 76
GRGFQ S + DI C++C E G KDC L D VE CY C G
Sbjct: 151 GRGFQLCSIFTEHKDIFSREKCHKCEECG---KDCRLFSDFTRHKKIHTVERCYKCEECG 207
Query: 77 HIAK---DCKEPKR----EREQCCYNCGKPGHLARDC-----DHADEQ--KCYSCGEFGH 122
K + E KR E+ C CGK + +H ++ KC CG+
Sbjct: 208 KEFKKFSNLTEHKRVHTGEKPYKCEGCGKTFTCSSTLVKHKRNHTGDRPYKCEECGKAFK 267
Query: 123 IQKDCTKVKCYRCGETGHVAINCSK 147
D T K GE + C+K
Sbjct: 268 CFSDLTNHKRIHTGEKPYKCEECNK 292
Score = 34.7 bits (78), Expect = 0.042
Identities = 28/102 (27%), Positives = 36/102 (35%), Gaps = 18/102 (17%)
Query: 69 CYNCGRGGHIAKDCKEPKR--EREQC--CYNCGKPGHLARDCDHADEQKCYSCGEFGHIQ 124
C CGRG + E K RE+C C CGK C +F +
Sbjct: 147 CNKCGRGFQLCSIFTEHKDIFSREKCHKCEECGKD--------------CRLFSDFTRHK 192
Query: 125 KDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 166
K T +CY+C E G S +E GE + C
Sbjct: 193 KIHTVERCYKCEECGKEFKKFSNLTEHKRVHTGEKPYKCEGC 234
Score = 33.1 bits (74), Expect = 0.12
Identities = 28/109 (25%), Positives = 38/109 (34%), Gaps = 19/109 (17%)
Query: 47 CYRCGESGHLA------KDCDLQEDVEACYNCGRGGHIAKD-CKEPKREREQCCYNCGKP 99
C +CG L KD +E C CG+ + D + K + CY C +
Sbjct: 147 CNKCGRGFQLCSIFTEHKDIFSREKCHKCEECGKDCRLFSDFTRHKKIHTVERCYKCEEC 206
Query: 100 GHLARDCDHADEQKCYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKT 148
G + + E K GE KC CG+T CS T
Sbjct: 207 GKEFKKFSNLTEHKRVHTGE--------KPYKCEGCGKT----FTCSST 243
>gi|224177533 zinc finger protein LOC400713 [Homo sapiens]
Length = 577
Score = 40.4 bits (93), Expect = 8e-04
Identities = 39/155 (25%), Positives = 56/155 (36%), Gaps = 31/155 (20%)
Query: 44 PDICYRCG----ESGHLAKDCDLQ--EDVEACYNCG----RGGHIAKDCKEPKREREQCC 93
P C+ CG ++ HLA + E C CG R H+A+ K E+ C
Sbjct: 267 PYKCHECGKVFTQNSHLANHHRIHTGEKPYKCNECGKVFNRNAHLARHQKIHSGEKPYKC 326
Query: 94 YNCGKP-----GHLARDCDHADEQ--KCYSCGEFGHIQKDCTKVKCYRCGETGHVAINCS 146
CGK G A H E+ KC CG+ + T+ + GE + C
Sbjct: 327 KECGKAFSGGSGLTAHLVIHTGEKLYKCNKCGKVFNRNAHLTRHQRIHTGEKPYECKECG 386
Query: 147 KT--------------SEVNCYRCGESGHLARECT 167
K + Y+C E G R+C+
Sbjct: 387 KVFRHKFCLTNHHRMHTGEQPYKCNECGKAFRDCS 421
Score = 36.2 bits (82), Expect = 0.014
Identities = 43/169 (25%), Positives = 62/169 (36%), Gaps = 24/169 (14%)
Query: 4 NECFKC-GRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDCDL 62
NEC K R+ H AR G + + + G F S G + HL
Sbjct: 299 NECGKVFNRNAHLARHQKIHSGE-KPYKCKECGKAFSGGS--------GLTAHLV--IHT 347
Query: 63 QEDVEACYNCG----RGGHIAKDCKEPKREREQCCYNCGKPGHLARDC------DHADEQ 112
E + C CG R H+ + + E+ C CGK + C H EQ
Sbjct: 348 GEKLYKCNKCGKVFNRNAHLTRHQRIHTGEKPYECKECGKVFR-HKFCLTNHHRMHTGEQ 406
Query: 113 KCYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGH 161
Y C E G +DC+ + + TG C + ++V +R S H
Sbjct: 407 P-YKCNECGKAFRDCSGLTAHLLIHTGEKPYKCKECAKVFRHRLSLSNH 454
Score = 30.4 bits (67), Expect = 0.79
Identities = 32/145 (22%), Positives = 47/145 (32%), Gaps = 26/145 (17%)
Query: 47 CYRCGE----SGHLAKDCDLQEDVEACYNCGRGGHIAKD----CKEPKREREQCCYNCGK 98
C +CG+ + HL + + E Y C G + + + + Y C +
Sbjct: 354 CNKCGKVFNRNAHLTRHQRIHTG-EKPYECKECGKVFRHKFCLTNHHRMHTGEQPYKCNE 412
Query: 99 PGHLARDCDHADEQKCYSCGEFGHIQKDCTKV-----------------KCYRCGETGHV 141
G RDC GE + K+C KV K YRC E G
Sbjct: 413 CGKAFRDCSGLTAHLLIHTGEKPYKCKECAKVFRHRLSLSNHQRFHTGEKPYRCDECGKD 472
Query: 142 AINCSKTSEVNCYRCGESGHLAREC 166
S + + GE + EC
Sbjct: 473 FTRNSNLANHHRIHTGEKPYKCSEC 497
Score = 29.6 bits (65), Expect = 1.3
Identities = 33/141 (23%), Positives = 46/141 (32%), Gaps = 34/141 (24%)
Query: 33 GRGFQFVSSSLPDICYRCGESGHLAKDC----------------DLQEDVEACYNCG--- 73
G+ F+ S + GE + K+C E C CG
Sbjct: 414 GKAFRDCSGLTAHLLIHTGEKPYKCKECAKVFRHRLSLSNHQRFHTGEKPYRCDECGKDF 473
Query: 74 -RGGHIAKDCKEPKREREQCCYNCGKP----GHLARDCDHADEQKCYSCGEFGHI----- 123
R ++A + E+ C C K HLAR +K Y C E G +
Sbjct: 474 TRNSNLANHHRIHTGEKPYKCSECHKVFSHNSHLARHRQIHTGEKSYKCNECGKVFSHKL 533
Query: 124 -----QKDCTKVKCYRCGETG 139
++ T K YRC E G
Sbjct: 534 YLKKHERIHTGEKPYRCHECG 554
Score = 27.3 bits (59), Expect = 6.7
Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 7/61 (11%)
Query: 113 KCYSCGE-FGHI------QKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARE 165
KC+ CG+ F I Q+ T K Y+C E G V S + + GE + E
Sbjct: 241 KCHECGKLFNRISLLARHQRIHTGEKPYKCHECGKVFTQNSHLANHHRIHTGEKPYKCNE 300
Query: 166 C 166
C
Sbjct: 301 C 301
>gi|189571667 zinc finger protein 696 [Homo sapiens]
Length = 374
Score = 39.7 bits (91), Expect = 0.001
Identities = 44/192 (22%), Positives = 63/192 (32%), Gaps = 41/192 (21%)
Query: 16 ARECPTGGGRGRGMRSRGRGFQFVSSSLPDI-----------------CYRCGESGHLAK 58
ARE P G RG + G + S +P C CG S +
Sbjct: 79 ARERPGGSPRGPVTSEKTGGQSGLESDVPPNAGPGAEGGGSWKGRPFPCGACGRSFKCSS 138
Query: 59 DCDLQEDVEA------CYNCGRG----GHIAKDCKEPKREREQCCYNCGKP-----GHLA 103
D + + C +CG+ H+ + + ER C CGK L
Sbjct: 139 DAAKHRSIHSGEKPYECSDCGKAFIHSSHVVRHQRAHSGERPYACAECGKAFGQSFNLLR 198
Query: 104 RDCDHADEQK--CYSCGEFGHIQKDCTK-------VKCYRCGETGHVAINCSKTSEVNCY 154
H E+ C CG+ + D K + Y CGE G ++ S
Sbjct: 199 HQRVHTGEKPYACADCGKAFGQRSDAAKHRRTHTGERLYACGECGKRFLHSSNVVRHRRT 258
Query: 155 RCGESGHLAREC 166
GE+ + REC
Sbjct: 259 HHGENPYECREC 270
>gi|58331272 zinc finger, CCHC domain containing 6 [Homo sapiens]
Length = 1495
Score = 39.3 bits (90), Expect = 0.002
Identities = 36/124 (29%), Positives = 46/124 (37%), Gaps = 39/124 (31%)
Query: 47 CYRCGESGHLAKDCDLQE------DVEACYNCGRGGHIAKDCKEPKR------ERE---- 90
C CG+ GH KDC ++ D E N + K KE K ERE
Sbjct: 1347 CRICGKIGHFMKDCPMRRKVRRRRDQEDALNQRYPENKEKRSKEDKEIHNKYTEREVSTK 1406
Query: 91 -----QCCYNCGKPGHLARDC----------------DHAD--EQKCYSCGEFGHIQKDC 127
QC KP A D D D E++C+ CG GHI+K+C
Sbjct: 1407 EDKPIQCTPQKAKPMRAAADLGREKILRPPVEKWKRQDDKDLREKRCFICGREGHIKKEC 1466
Query: 128 TKVK 131
+ K
Sbjct: 1467 PQFK 1470
Score = 31.6 bits (70), Expect = 0.35
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSR 32
+ CF CGR GH +ECP G + S+
Sbjct: 1448 LREKRCFICGREGHIKKECPQFKGSSGSLSSK 1479
Score = 30.0 bits (66), Expect = 1.0
Identities = 31/128 (24%), Positives = 48/128 (37%), Gaps = 22/128 (17%)
Query: 61 DLQEDVEACYNCGRGGHIAKDC---KEPKREREQ-------CCYNCGKPGHLARDCDHAD 110
+L + C CG+ GH KDC ++ +R R+Q N K ++ +
Sbjct: 1339 ELAPNDRCCRICGKIGHFMKDCPMRRKVRRRRDQEDALNQRYPENKEKRSKEDKEIHNKY 1398
Query: 111 EQKCYSCGEFGHIQKDCTKVKCYRCG-ETGHVAI-----------NCSKTSEVNCYRCGE 158
++ S E IQ K K R + G I + E C+ CG
Sbjct: 1399 TEREVSTKEDKPIQCTPQKAKPMRAAADLGREKILRPPVEKWKRQDDKDLREKRCFICGR 1458
Query: 159 SGHLAREC 166
GH+ +EC
Sbjct: 1459 EGHIKKEC 1466
>gi|169213834 PREDICTED: similar to hCG36734 [Homo sapiens]
Length = 560
Score = 38.5 bits (88), Expect = 0.003
Identities = 32/148 (21%), Positives = 54/148 (36%), Gaps = 31/148 (20%)
Query: 44 PDICYRCGESGHLAKDCDLQEDVEA------CYNCGRGGHIAKDCKEPKR----EREQCC 93
P C CG++ ++ + + + C CG+ ++ KR E+ C
Sbjct: 285 PYKCEECGKTFNMFSSLNNHKRIHTGEKPYKCKECGKAFNVFSSLNNHKRIHTGEKPYKC 344
Query: 94 YNCGK----PGHLARDCDHADEQKCYSCGEFGHIQKDCTKV-------------KCYRCG 136
CGK P HLA +K Y C E G + + KC CG
Sbjct: 345 EECGKAFNQPSHLATHKRIHTGEKLYKCEECGKAFSQSSHITTHKRIHTGEKPYKCEECG 404
Query: 137 ETGHVAINCSKTSEVNC----YRCGESG 160
+ V+++ + ++ Y+C E G
Sbjct: 405 KAFKVSVHLTTHKRIHTGEKPYKCEECG 432
Score = 32.3 bits (72), Expect = 0.21
Identities = 32/147 (21%), Positives = 55/147 (37%), Gaps = 24/147 (16%)
Query: 44 PDICYRCGESGHLAKDCDLQEDVEA------CYNCGRGGHIAKDCKEPKR----EREQCC 93
P C CG++ +++ + + + C CG+ ++ KR E+ C
Sbjct: 257 PYKCEECGKAFNVSSSLNNHKRIHTGEKPYKCEECGKTFNMFSSLNNHKRIHTGEKPYKC 316
Query: 94 YNCGKPGHLARDCD-----HADEQ--KCYSCGEF----GHI---QKDCTKVKCYRCGETG 139
CGK ++ + H E+ KC CG+ H+ ++ T K Y+C E G
Sbjct: 317 KECGKAFNVFSSLNNHKRIHTGEKPYKCEECGKAFNQPSHLATHKRIHTGEKLYKCEECG 376
Query: 140 HVAINCSKTSEVNCYRCGESGHLAREC 166
S + GE + EC
Sbjct: 377 KAFSQSSHITTHKRIHTGEKPYKCEEC 403
Score = 32.0 bits (71), Expect = 0.27
Identities = 28/116 (24%), Positives = 43/116 (37%), Gaps = 18/116 (15%)
Query: 69 CYNCGRG----GHIAKDCKEPKREREQCCYNCGKPGHLARDCD-----HADEQ--KCYSC 117
C CG+ H+ K + R C CGK + + H E+ KC C
Sbjct: 204 CKECGKSFCMLSHLTKHERNHTRVNCYKCEECGKAFSVPSKLNNHKRIHTGEKPYKCEEC 263
Query: 118 GEFGHIQKDCTKVKCYRCGETGHVAINCSKT----SEVNCYR---CGESGHLAREC 166
G+ ++ K GE + C KT S +N ++ GE + +EC
Sbjct: 264 GKAFNVSSSLNNHKRIHTGEKPYKCEECGKTFNMFSSLNNHKRIHTGEKPYKCKEC 319
Score = 31.6 bits (70), Expect = 0.35
Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 7/61 (11%)
Query: 113 KCYSCGE----FGHIQK---DCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARE 165
KC CG+ H+ K + T+V CY+C E G SK + GE + E
Sbjct: 203 KCKECGKSFCMLSHLTKHERNHTRVNCYKCEECGKAFSVPSKLNNHKRIHTGEKPYKCEE 262
Query: 166 C 166
C
Sbjct: 263 C 263
Score = 31.2 bits (69), Expect = 0.46
Identities = 39/152 (25%), Positives = 55/152 (36%), Gaps = 33/152 (21%)
Query: 47 CYRCG----ESGHLA--KDCDLQEDVEACYNCGRGGHIAKDCKEPKR----EREQCCYNC 96
C CG +S H+ K E C CG+ ++ KR E+ C C
Sbjct: 372 CEECGKAFSQSSHITTHKRIHTGEKPYKCEECGKAFKVSVHLTTHKRIHTGEKPYKCEEC 431
Query: 97 GKPGHLARDCD-----HADEQ--KCYSCGEFGHIQKDC--------TKVKCYRCGETG-- 139
GK + + H E+ KC CG+ G Q TK K Y+C E G
Sbjct: 432 GKAFNQSSALTTHKIIHTGERPYKCKQCGK-GFSQSSTLTKHKIIHTKEKPYKCEECGKA 490
Query: 140 ---HVAINCSKT--SEVNCYRCGESGHLAREC 166
+ +N K + Y+C E G +C
Sbjct: 491 FNQYSTLNKHKIIHAREKPYKCEECGKAFNKC 522
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.138 0.480
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,656,297
Number of Sequences: 37866
Number of extensions: 485144
Number of successful extensions: 4539
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 77
Number of HSP's successfully gapped in prelim test: 478
Number of HSP's that attempted gapping in prelim test: 2037
Number of HSP's gapped (non-prelim): 1995
length of query: 172
length of database: 18,247,518
effective HSP length: 95
effective length of query: 77
effective length of database: 14,650,248
effective search space: 1128069096
effective search space used: 1128069096
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.