Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 113412620
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|113412620 PREDICTED: hypothetical protein [Homo sapiens]
(109 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169162524 PREDICTED: hypothetical protein [Homo sapiens] 222 4e-59
gi|113412620 PREDICTED: hypothetical protein [Homo sapiens] 222 4e-59
gi|113411677 PREDICTED: hypothetical protein [Homo sapiens] 222 4e-59
gi|7657581 solute carrier family 25, member 13 isoform 2 [Homo s... 29 0.93
gi|237649019 solute carrier family 25, member 13 isoform 1 [Homo... 29 0.93
gi|42544174 deoxythymidylate kinase (thymidylate kinase) [Homo s... 28 1.6
gi|24111244 MAM domain containing glycosylphosphatidylinositol a... 28 2.1
gi|223941912 coiled-coil domain containing 135 [Homo sapiens] 27 2.7
gi|5453990 proteasome activator subunit 1 isoform 1 [Homo sapiens] 27 2.7
gi|30581141 proteasome activator subunit 1 isoform 2 [Homo sapiens] 27 2.7
gi|7019561 thyrotropin-releasing hormone degrading enzyme [Homo ... 27 2.7
gi|239745211 PREDICTED: hypothetical protein XP_002343409 [Homo ... 27 3.5
gi|224465228 arylformamidase isoform 2 [Homo sapiens] 27 4.6
gi|192807282 arylformamidase isoform 1 [Homo sapiens] 27 4.6
gi|157739936 chromosome 10 open reading frame 68 [Homo sapiens] 27 4.6
gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin ... 27 4.6
gi|222446603 golgi autoantigen, golgin subfamily a-like [Homo sa... 26 6.0
gi|237858799 adenylate kinase domain containing 1 isoform 1 [Hom... 26 6.0
gi|34304368 dystrobrevin binding protein 1 isoform b [Homo sapiens] 26 6.0
gi|19549327 dystrobrevin binding protein 1 isoform a [Homo sapiens] 26 6.0
gi|115298659 spectrin, alpha, erythrocytic 1 [Homo sapiens] 26 6.0
gi|15431328 caspase 1 isoform alpha precursor [Homo sapiens] 26 7.9
gi|4502573 caspase 1 isoform beta precursor [Homo sapiens] 26 7.9
gi|148596922 solute carrier family 29 (nucleoside transporters),... 26 7.9
gi|4557467 excision repair cross-complementing rodent repair def... 26 7.9
gi|7662146 DnaJ (Hsp40) homolog, subfamily C, member 6 [Homo sap... 26 7.9
gi|20911035 peptidylprolyl isomerase-like 4 [Homo sapiens] 26 7.9
gi|62953113 caspase-1 dominant-negative inhibitor pseudo-ICE iso... 26 7.9
gi|16751833 caspase-1 dominant-negative inhibitor pseudo-ICE iso... 26 7.9
>gi|169162524 PREDICTED: hypothetical protein [Homo sapiens]
Length = 109
Score = 222 bits (566), Expect = 4e-59
Identities = 109/109 (100%), Positives = 109/109 (100%)
Query: 1 MVLTGVRLMKWRDEKTFGTDCVEAVILLVTLLWEKKEAFHVGFSEELQYFPERSTEKLKV 60
MVLTGVRLMKWRDEKTFGTDCVEAVILLVTLLWEKKEAFHVGFSEELQYFPERSTEKLKV
Sbjct: 1 MVLTGVRLMKWRDEKTFGTDCVEAVILLVTLLWEKKEAFHVGFSEELQYFPERSTEKLKV 60
Query: 61 FEWEEEKQTTATSEDNTKHLVHSVYTRGAVNFLVEKELSLEKYLKKPLK 109
FEWEEEKQTTATSEDNTKHLVHSVYTRGAVNFLVEKELSLEKYLKKPLK
Sbjct: 61 FEWEEEKQTTATSEDNTKHLVHSVYTRGAVNFLVEKELSLEKYLKKPLK 109
>gi|113412620 PREDICTED: hypothetical protein [Homo sapiens]
Length = 109
Score = 222 bits (566), Expect = 4e-59
Identities = 109/109 (100%), Positives = 109/109 (100%)
Query: 1 MVLTGVRLMKWRDEKTFGTDCVEAVILLVTLLWEKKEAFHVGFSEELQYFPERSTEKLKV 60
MVLTGVRLMKWRDEKTFGTDCVEAVILLVTLLWEKKEAFHVGFSEELQYFPERSTEKLKV
Sbjct: 1 MVLTGVRLMKWRDEKTFGTDCVEAVILLVTLLWEKKEAFHVGFSEELQYFPERSTEKLKV 60
Query: 61 FEWEEEKQTTATSEDNTKHLVHSVYTRGAVNFLVEKELSLEKYLKKPLK 109
FEWEEEKQTTATSEDNTKHLVHSVYTRGAVNFLVEKELSLEKYLKKPLK
Sbjct: 61 FEWEEEKQTTATSEDNTKHLVHSVYTRGAVNFLVEKELSLEKYLKKPLK 109
>gi|113411677 PREDICTED: hypothetical protein [Homo sapiens]
Length = 109
Score = 222 bits (566), Expect = 4e-59
Identities = 109/109 (100%), Positives = 109/109 (100%)
Query: 1 MVLTGVRLMKWRDEKTFGTDCVEAVILLVTLLWEKKEAFHVGFSEELQYFPERSTEKLKV 60
MVLTGVRLMKWRDEKTFGTDCVEAVILLVTLLWEKKEAFHVGFSEELQYFPERSTEKLKV
Sbjct: 1 MVLTGVRLMKWRDEKTFGTDCVEAVILLVTLLWEKKEAFHVGFSEELQYFPERSTEKLKV 60
Query: 61 FEWEEEKQTTATSEDNTKHLVHSVYTRGAVNFLVEKELSLEKYLKKPLK 109
FEWEEEKQTTATSEDNTKHLVHSVYTRGAVNFLVEKELSLEKYLKKPLK
Sbjct: 61 FEWEEEKQTTATSEDNTKHLVHSVYTRGAVNFLVEKELSLEKYLKKPLK 109
>gi|7657581 solute carrier family 25, member 13 isoform 2 [Homo
sapiens]
Length = 675
Score = 28.9 bits (63), Expect = 0.93
Identities = 18/80 (22%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Query: 23 EAVILLVTLLWEKKEAFHVGFSEELQYFPERSTEKLKVFEWEEEKQTTATSEDNTKHLVH 82
+A+ ++ L++K V F + Q F + + + F W+ E ++ +HL +
Sbjct: 89 DALFMVAFQLFDKAGKGEVTFEDVKQVFGQTTIHQHIPFNWDSEFVQLHFGKERKRHLTY 148
Query: 83 SVYTRGAVNFLVEKELSLEK 102
+ +T+ FL+E +L K
Sbjct: 149 AEFTQ----FLLEIQLEHAK 164
>gi|237649019 solute carrier family 25, member 13 isoform 1 [Homo
sapiens]
Length = 676
Score = 28.9 bits (63), Expect = 0.93
Identities = 18/80 (22%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Query: 23 EAVILLVTLLWEKKEAFHVGFSEELQYFPERSTEKLKVFEWEEEKQTTATSEDNTKHLVH 82
+A+ ++ L++K V F + Q F + + + F W+ E ++ +HL +
Sbjct: 89 DALFMVAFQLFDKAGKGEVTFEDVKQVFGQTTIHQHIPFNWDSEFVQLHFGKERKRHLTY 148
Query: 83 SVYTRGAVNFLVEKELSLEK 102
+ +T+ FL+E +L K
Sbjct: 149 AEFTQ----FLLEIQLEHAK 164
>gi|42544174 deoxythymidylate kinase (thymidylate kinase) [Homo
sapiens]
Length = 212
Score = 28.1 bits (61), Expect = 1.6
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Query: 42 GFSEELQYFPERSTEKLKVFEWEEEKQTTATSEDNTKHLVHSVYTRGAVNFLVEK 96
G EL FPERSTE K+ +K++ ED++ HL+ S V + EK
Sbjct: 34 GHRAELLRFPERSTEIGKLLSSYLQKKSDV--EDHSVHLLFSANRWEQVPLIKEK 86
>gi|24111244 MAM domain containing glycosylphosphatidylinositol
anchor 1 [Homo sapiens]
Length = 955
Score = 27.7 bits (60), Expect = 2.1
Identities = 23/99 (23%), Positives = 38/99 (38%), Gaps = 9/99 (9%)
Query: 14 EKTFGTDCVEAVILLVTLLWEKKEAFHVGFSEELQYFPERSTEKLKV---------FEWE 64
E G ++++ + V L E H S+ F + T L+ F W+
Sbjct: 111 ENGVGVPAIKSIRVDVQYLDEPMLTVHQTVSDVRGNFYQEKTVFLRCTVNSNPPARFIWK 170
Query: 65 EEKQTTATSEDNTKHLVHSVYTRGAVNFLVEKELSLEKY 103
T + S+DN + +YT+G L K L + Y
Sbjct: 171 RGSDTLSHSQDNGVDIYEPLYTQGETKVLKLKNLRPQDY 209
>gi|223941912 coiled-coil domain containing 135 [Homo sapiens]
Length = 874
Score = 27.3 bits (59), Expect = 2.7
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 6/59 (10%)
Query: 52 ERSTEKL-KVFEWEEEKQTTATSEDNTKHLVHSVYTRGAVNFLVE-----KELSLEKYL 104
E+ T++L K +W +E Q T T ED +L + + L + KEL+ KYL
Sbjct: 796 EKETQELQKKQQWYQENQVTLTPEDEDLYLSYCSQAMFRIRILEQRLNRHKELAPLKYL 854
>gi|5453990 proteasome activator subunit 1 isoform 1 [Homo sapiens]
Length = 249
Score = 27.3 bits (59), Expect = 2.7
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Query: 6 VRLMKWRDEKTFGTDCVEAVILLVTLLWEKKEAFHVGFSEELQYFPER 53
+++ + D FG E V L+T L K E FH S +YF ER
Sbjct: 137 LQIPRIEDGNNFGVAVQEKVFELMTSLHTKLEGFHTQIS---KYFSER 181
>gi|30581141 proteasome activator subunit 1 isoform 2 [Homo sapiens]
Length = 250
Score = 27.3 bits (59), Expect = 2.7
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Query: 6 VRLMKWRDEKTFGTDCVEAVILLVTLLWEKKEAFHVGFSEELQYFPER 53
+++ + D FG E V L+T L K E FH S +YF ER
Sbjct: 137 LQIPRIEDGNNFGVAVQEKVFELMTSLHTKLEGFHTQIS---KYFSER 181
>gi|7019561 thyrotropin-releasing hormone degrading enzyme [Homo
sapiens]
Length = 1024
Score = 27.3 bits (59), Expect = 2.7
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 11/84 (13%)
Query: 11 WRDEKT-FGTDCVEAVILLVTLLWEKKEAFHVGFSEELQYFPERSTEKLKVFEWEEEKQT 69
W EK F TD + V+LL L + H E LQ +T+ +VF+W K+
Sbjct: 481 WNMEKQRFLTDVLHEVMLLDGLA-----SSHPVSQEVLQ-----ATDIDRVFDWIAYKKG 530
Query: 70 TATSEDNTKHLVHSVYTRGAVNFL 93
A + HSV+ RG ++L
Sbjct: 531 AALIRMLANFMGHSVFQRGLQDYL 554
>gi|239745211 PREDICTED: hypothetical protein XP_002343409 [Homo
sapiens]
Length = 1281
Score = 26.9 bits (58), Expect = 3.5
Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 5/62 (8%)
Query: 7 RLMKWR-DEKTFGTDCVEAVILLVTLLWEKKEAFHVGFSEELQYFPERSTEKLKVFEWEE 65
+++ W D K +G + + LWE+ E+ + +LQ+ + E LK WE+
Sbjct: 717 QMVPWEADTKFWGLQLQQQLQAEAEHLWEELESL----AGQLQWAHMQDNEDLKCLNWEQ 772
Query: 66 EK 67
E+
Sbjct: 773 ER 774
>gi|224465228 arylformamidase isoform 2 [Homo sapiens]
Length = 308
Score = 26.6 bits (57), Expect = 4.6
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
Query: 35 KKEAFHV----GFSEELQ-YFPERSTEKLKVFEWEEEKQTTATSEDNTKHLVHSVYTRGA 89
+K HV G E++ YFP+ S+E L F + + S+D + +VH + +G
Sbjct: 60 RKSLLHVPYGDGEGEKVDIYFPDESSEALPFFLFFHGGYWQSGSKDESAFMVHPLTAQGV 119
Query: 90 VNFLV 94
+V
Sbjct: 120 AVVIV 124
>gi|192807282 arylformamidase isoform 1 [Homo sapiens]
Length = 303
Score = 26.6 bits (57), Expect = 4.6
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
Query: 35 KKEAFHV----GFSEELQ-YFPERSTEKLKVFEWEEEKQTTATSEDNTKHLVHSVYTRGA 89
+K HV G E++ YFP+ S+E L F + + S+D + +VH + +G
Sbjct: 60 RKSLLHVPYGDGEGEKVDIYFPDESSEALPFFLFFHGGYWQSGSKDESAFMVHPLTAQGV 119
Query: 90 VNFLV 94
+V
Sbjct: 120 AVVIV 124
>gi|157739936 chromosome 10 open reading frame 68 [Homo sapiens]
Length = 628
Score = 26.6 bits (57), Expect = 4.6
Identities = 13/46 (28%), Positives = 24/46 (52%)
Query: 64 EEEKQTTATSEDNTKHLVHSVYTRGAVNFLVEKELSLEKYLKKPLK 109
++E +T + S T +HS RG +N ++ +L + Y + LK
Sbjct: 320 KDEFKTRSKSLPETDERLHSTTERGTINDAIKTQLKRKSYPETVLK 365
>gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin (with
transmembrane signal), 1 [Homo sapiens]
Length = 3259
Score = 26.6 bits (57), Expect = 4.6
Identities = 20/83 (24%), Positives = 38/83 (45%), Gaps = 7/83 (8%)
Query: 28 LVTLLWEKKEAFHVGFSEELQYFPERSTEKLKVFEWEEEKQTTATSE-----DNTKHLVH 82
+++LL K+EA V +E Q + E + EEE+ E D T L+
Sbjct: 2384 IISLLSGKEEAIQVAIAELRQQHDKEIKELENLLSQEEEENIVLEEENKKAVDKTNQLME 2443
Query: 83 SVYTRGAVNFLVEKELSLEKYLK 105
++ T N ++++ L+ ++K
Sbjct: 2444 TLKTIKKEN--IQQKAQLDSFVK 2464
>gi|222446603 golgi autoantigen, golgin subfamily a-like [Homo
sapiens]
Length = 668
Score = 26.2 bits (56), Expect = 6.0
Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Query: 31 LLWEKKEAFHVGFSEELQYFPERSTEKLKVFEWEEEKQTTATSE 74
++WEK+E EE+ + E +L+ WE+E++ E
Sbjct: 343 MMWEKEEKMRR--QEEMMWEKEEKMRRLEEMMWEKEEKIRELEE 384
>gi|237858799 adenylate kinase domain containing 1 isoform 1 [Homo
sapiens]
Length = 1911
Score = 26.2 bits (56), Expect = 6.0
Identities = 16/49 (32%), Positives = 23/49 (46%)
Query: 32 LWEKKEAFHVGFSEELQYFPERSTEKLKVFEWEEEKQTTATSEDNTKHL 80
L EK FH+ F E LQ TEK E+EE+ + ++ + L
Sbjct: 1011 LAEKLNIFHIQFEEVLQEKLLLKTEKKVGPEFEEDSENEQAAKQELEEL 1059
>gi|34304368 dystrobrevin binding protein 1 isoform b [Homo sapiens]
Length = 303
Score = 26.2 bits (56), Expect = 6.0
Identities = 10/32 (31%), Positives = 20/32 (62%)
Query: 20 DCVEAVILLVTLLWEKKEAFHVGFSEELQYFP 51
+ V++ +++++ WEKK+ V E+LQ P
Sbjct: 74 ELVDSEVVMLSAHWEKKKTSLVELQEQLQQLP 105
>gi|19549327 dystrobrevin binding protein 1 isoform a [Homo sapiens]
Length = 351
Score = 26.2 bits (56), Expect = 6.0
Identities = 10/32 (31%), Positives = 20/32 (62%)
Query: 20 DCVEAVILLVTLLWEKKEAFHVGFSEELQYFP 51
+ V++ +++++ WEKK+ V E+LQ P
Sbjct: 74 ELVDSEVVMLSAHWEKKKTSLVELQEQLQQLP 105
>gi|115298659 spectrin, alpha, erythrocytic 1 [Homo sapiens]
Length = 2419
Score = 26.2 bits (56), Expect = 6.0
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
Query: 47 LQYFPERSTEKLKVFEWEEEKQTTATSEDNTKHLVHS 83
LQ F TE + +W +EK+ TSED K LV S
Sbjct: 266 LQRFKRDVTEAI---QWIKEKEPVLTSEDYGKDLVAS 299
>gi|15431328 caspase 1 isoform alpha precursor [Homo sapiens]
Length = 404
Score = 25.8 bits (55), Expect = 7.9
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 55 TEKLKVFEWEEEKQTTATSEDNTKHLVHSVYTRGA 89
T L E E+ K+ AT D T+ L+ SV +GA
Sbjct: 32 TRVLNKEEMEKVKRENATVMDKTRALIDSVIPKGA 66
>gi|4502573 caspase 1 isoform beta precursor [Homo sapiens]
Length = 383
Score = 25.8 bits (55), Expect = 7.9
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 55 TEKLKVFEWEEEKQTTATSEDNTKHLVHSVYTRGA 89
T L E E+ K+ AT D T+ L+ SV +GA
Sbjct: 32 TRVLNKEEMEKVKRENATVMDKTRALIDSVIPKGA 66
>gi|148596922 solute carrier family 29 (nucleoside transporters),
member 3 [Homo sapiens]
Length = 475
Score = 25.8 bits (55), Expect = 7.9
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 73 SEDNTKHLVHSVYTRGAVNFLVEKELSLEKYLKKP 107
SED+ +H +S Y + + ++E LEK L +P
Sbjct: 5 SEDDFQHSSNSTYRTTSSSLRADQEALLEKLLDRP 39
>gi|4557467 excision repair cross-complementing rodent repair
deficiency, complementation group 8 isoform 1 [Homo
sapiens]
Length = 396
Score = 25.8 bits (55), Expect = 7.9
Identities = 14/46 (30%), Positives = 24/46 (52%)
Query: 43 FSEELQYFPERSTEKLKVFEWEEEKQTTATSEDNTKHLVHSVYTRG 88
F + L+ + + + VF +EE + S +TKH + +V TRG
Sbjct: 120 FDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRG 165
>gi|7662146 DnaJ (Hsp40) homolog, subfamily C, member 6 [Homo
sapiens]
Length = 913
Score = 25.8 bits (55), Expect = 7.9
Identities = 12/30 (40%), Positives = 16/30 (53%)
Query: 52 ERSTEKLKVFEWEEEKQTTATSEDNTKHLV 81
E EKLK+ EW E K+ + +T H V
Sbjct: 814 EMDPEKLKILEWIEGKERNIRALLSTMHTV 843
>gi|20911035 peptidylprolyl isomerase-like 4 [Homo sapiens]
Length = 492
Score = 25.8 bits (55), Expect = 7.9
Identities = 12/38 (31%), Positives = 23/38 (60%)
Query: 34 EKKEAFHVGFSEELQYFPERSTEKLKVFEWEEEKQTTA 71
E+ ++ +G EE+ F RS E+++ + E+E +T A
Sbjct: 184 EQLDSGRIGADEEIDDFKGRSAEEVEEIKAEKEAKTQA 221
>gi|62953113 caspase-1 dominant-negative inhibitor pseudo-ICE
isoform 1 [Homo sapiens]
Length = 197
Score = 25.8 bits (55), Expect = 7.9
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 55 TEKLKVFEWEEEKQTTATSEDNTKHLVHSVYTRGA 89
T L E E+ K+ AT D T+ L+ SV +GA
Sbjct: 32 TRVLNQEEMEKVKRENATVMDKTRALIDSVIPKGA 66
>gi|16751833 caspase-1 dominant-negative inhibitor pseudo-ICE
isoform 2 [Homo sapiens]
Length = 97
Score = 25.8 bits (55), Expect = 7.9
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 55 TEKLKVFEWEEEKQTTATSEDNTKHLVHSVYTRGA 89
T L E E+ K+ AT D T+ L+ SV +GA
Sbjct: 32 TRVLNQEEMEKVKRENATVMDKTRALIDSVIPKGA 66
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.132 0.384
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,113,639
Number of Sequences: 37866
Number of extensions: 159122
Number of successful extensions: 424
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 402
Number of HSP's gapped (non-prelim): 31
length of query: 109
length of database: 18,247,518
effective HSP length: 79
effective length of query: 30
effective length of database: 15,256,104
effective search space: 457683120
effective search space used: 457683120
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.