Guide to the Human Genome
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Name: SLC25A13 Sequence: fasta or formatted (675aa) NCBI GI: 7657581
Description:

solute carrier family 25, member 13 isoform 2

Referenced in:

Mitochondria
Solute Carrier Families

Other entries for this name:
alt prot [676aa] solute carrier family 25, member 13 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.9         67           3
 C cysteine            1.0          7           1
 D aspartate           4.1         28           1
 E glutamate           5.8         39           2
 F phenylalanine       7.6         51           2
 G glycine             8.4         57           3
 H histidine           1.5         10           1
 I isoleucine          4.9         33           1
 K lysine              5.8         39           2
 L leucine             9.5         64           3
 M methionine          1.8         12           1
 N asparagine          2.8         19           2
 P proline             5.2         35           1
 Q glutamine           4.3         29           1
 R arginine            5.2         35           1
 S serine              5.3         36           2
 T threonine           5.5         37           2
 V valine              8.1         55           2
 W tryptophan          0.4          3           1
 Y tyrosine            2.8         19           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 25, member 13 isoform 2 
SLC25A13              0.996   solute carrier family 25, member 13 isoform 1 [Homo...
SLC25A12              0.784   solute carrier family 25, member 12 
SLC25A22              0.143   mitochondrial glutamate carrier 1 
SLC25A18              0.137   solute carrier 
SLC25A45              0.077   solute carrier family 25, member 45 isoform a [Homo...
SLC25A21              0.074   solute carrier family 25 (mitochondrial oxodicarboxy...
SLC25A20              0.072   carnitine/acylcarnitine translocase 
SLC25A31              0.070   solute carrier family 25 (mitochondrial carrier; ade...
C14orf68              0.069   chromosome 14 open reading frame 68 
SLC25A29              0.067   solute carrier family 25, member 29 
SLC25A4               0.065   solute carrier family 25 (mitochondrial carrier; ade...
SLC25A36              0.062   solute carrier family 25, member 36 isoform a [Homo...
SLC25A6               0.062   solute carrier family 25, member A6 
SLC25A44              0.060   solute carrier family 25, member 44 isoform 1 
SLC25A45              0.059   solute carrier family 25, member 45 isoform b [Homo...
SLC25A36              0.059   solute carrier family 25, member 36 isoform b [Homo...
SLC25A37              0.059   solute carrier family 25, member 37 
SLC25A5               0.058   solute carrier family 25, member 5 
SLC25A15              0.057   mitochondrial ornithine transporter 1 
SLC25A2               0.057   solute carrier family 25 member 2 
SLC25A33              0.057   mitochondrial carrier protein MGC4399 
SLC25A26              0.056   solute carrier family 25, member 26 
SLC25A1               0.056   solute carrier family 25 (mitochondrial carrier; cit...
SLC25A14              0.056   solute carrier family 25, member 14 isoform UCP5L [Ho...
SLC25A14              0.056   solute carrier family 25, member 14 isoform UCP5S [H...
SLC25A28              0.056   solute carrier family 25, member 28 
SLC25A39              0.055   solute carrier family 25, member 39 isoform b 
SLC25A39              0.055   solute carrier family 25, member 39 isoform a [Homo...
SLC25A16              0.054   solute carrier family 25, member 16 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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