Guide to the Human Genome
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Name: ZNF557 Sequence: fasta or formatted (430aa) NCBI GI: 113205079
Description:

zinc finger protein 557 isoform a

Referenced in:

Kruppel-related Zinc Finger Proteins

Other entries for this name:
alt mRNA [430aa] zinc finger protein 557 isoform a
alt prot [423aa] zinc finger protein 557 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.0         13           2
 C cysteine            5.1         22           1
 D aspartate           2.3         10           1
 E glutamate           7.7         33           2
 F phenylalanine       4.2         18           1
 G glycine             6.7         29           2
 H histidine           5.8         25           1
 I isoleucine          2.6         11           1
 K lysine              7.4         32           2
 L leucine             7.2         31           2
 M methionine          1.9          8           1
 N asparagine          5.3         23           1
 P proline             3.7         16           2
 Q glutamine           3.0         13           1
 R arginine            7.7         33           3
 S serine              9.8         42           2
 T threonine           7.4         32           1
 V valine              4.4         19           2
 W tryptophan          0.5          2           1
 Y tyrosine            4.2         18           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 557 isoform a 
ZNF557                1.000   zinc finger protein 557 isoform a 
ZNF557                0.977   zinc finger protein 557 isoform b 
ZNF558                0.617   zinc finger protein 558 
ZNF317                0.431   zinc finger protein 317 
ZNF157                0.430   zinc finger protein 157 
ZNF383                0.415   zinc finger protein 383 
ZNF485                0.414   zinc finger protein 485 
ZNF595                0.410   zinc finger protein 595 
ZNF333                0.400   zinc finger protein 333 
ZNF682                0.399   zinc finger protein 682 isoform 1 
ZNF189                0.399   zinc finger protein 189 isoform 1 
ZNF154                0.398   zinc finger protein 154 
ZNF829                0.397   zinc finger protein 829 
ZNF658                0.395   zinc finger protein 658 
ZNF718                0.395   zinc finger protein 718 
ZNF25                 0.392   zinc finger protein 25 
ZNF420                0.391   zinc finger protein 420 
ZNF3                  0.391   zinc finger protein 3 isoform 2 
ZNF665                0.390   zinc finger protein 665 
ZNF30                 0.390   zinc finger protein 30 isoform b 
ZNF791                0.389   zinc finger protein 791 
ZNF98                 0.388   zinc finger protein 98 
ZNF135                0.388   zinc finger protein 135 
ZNF845                0.386   zinc finger protein 845 
ZNF773                0.386   zinc finger protein 773 
LOC344065             0.386   PREDICTED: similar to zinc finger protein 570 [Homo...
LOC344065             0.386   PREDICTED: similar to zinc finger protein 570 [Homo...
LOC344065             0.386   PREDICTED: similar to zinc finger protein 570 [Homo...
ZNF708                0.386   zinc finger protein 708 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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