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Search of human proteins with 10190714
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|10190714 RAS-related protein RAB-22A [Homo sapiens]
(194 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|10190714 RAS-related protein RAB-22A [Homo sapiens] 394 e-110
gi|33589861 RAB31, member RAS oncogene family [Homo sapiens] 276 1e-74
gi|19923262 RAB5A, member RAS oncogene family [Homo sapiens] 191 3e-49
gi|41393614 RAB5C, member RAS oncogene family isoform a [Homo sa... 188 2e-48
gi|41393545 RAB5C, member RAS oncogene family isoform b [Homo sa... 188 2e-48
gi|4506371 RAB5B, member RAS oncogene family [Homo sapiens] 187 4e-48
gi|4758988 RAB1A, member RAS oncogene family isoform 1 [Homo sap... 147 7e-36
gi|21361418 RAB30, member RAS oncogene family [Homo sapiens] 146 1e-35
gi|21361884 RAB2B protein isoform 1 [Homo sapiens] 145 2e-35
gi|190358517 RAB11B, member RAS oncogene family [Homo sapiens] 145 2e-35
gi|16933567 mel transforming oncogene [Homo sapiens] 145 2e-35
gi|19923231 RAB6A, member RAS oncogene family isoform a [Homo sa... 145 2e-35
gi|7706563 RAB8B, member RAS oncogene family [Homo sapiens] 145 2e-35
gi|13569962 RAB1B, member RAS oncogene family [Homo sapiens] 144 4e-35
gi|7661922 RAB21, member RAS oncogene family [Homo sapiens] 144 6e-35
gi|4506365 RAB2A, member RAS oncogene family [Homo sapiens] 142 1e-34
gi|96975097 RAB6B, member RAS oncogene family [Homo sapiens] 142 1e-34
gi|38679888 RAB6A, member RAS oncogene family isoform b [Homo sa... 142 2e-34
gi|19923483 GTPase Rab14 [Homo sapiens] 142 2e-34
gi|4758984 Ras-related protein Rab-11A [Homo sapiens] 142 2e-34
gi|116812567 RAB25 [Homo sapiens] 139 1e-33
gi|4506363 RAB13, member RAS oncogene family [Homo sapiens] 139 1e-33
gi|10880989 RAB18, member RAS oncogene family [Homo sapiens] 139 2e-33
gi|169204777 PREDICTED: similar to RAB13, member RAS oncogene fa... 137 7e-33
gi|169205558 PREDICTED: similar to hCG24991 [Homo sapiens] 137 7e-33
gi|169204174 PREDICTED: similar to hCG24991 [Homo sapiens] 137 7e-33
gi|19923260 RAB4A, member RAS oncogene family [Homo sapiens] 136 1e-32
gi|82659107 ras-related GTP-binding protein 4b [Homo sapiens] 135 2e-32
gi|117938299 RAB6C-like [Homo sapiens] 135 2e-32
gi|4506367 RAB3A, member RAS oncogene family [Homo sapiens] 135 3e-32
>gi|10190714 RAS-related protein RAB-22A [Homo sapiens]
Length = 194
Score = 394 bits (1011), Expect = e-110
Identities = 194/194 (100%), Positives = 194/194 (100%)
Query: 1 MALRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWD 60
MALRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWD
Sbjct: 1 MALRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWD 60
Query: 61 TAGQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKC 120
TAGQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKC
Sbjct: 61 TAGQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKC 120
Query: 121 DLIDVREVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRIPSTDANLPSGGKGF 180
DLIDVREVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRIPSTDANLPSGGKGF
Sbjct: 121 DLIDVREVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRIPSTDANLPSGGKGF 180
Query: 181 KLRRQPSEPKRSCC 194
KLRRQPSEPKRSCC
Sbjct: 181 KLRRQPSEPKRSCC 194
>gi|33589861 RAB31, member RAS oncogene family [Homo sapiens]
Length = 195
Score = 276 bits (705), Expect = 1e-74
Identities = 138/194 (71%), Positives = 158/194 (81%)
Query: 1 MALRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWD 60
MA+RELKVCLLGDTGVGKSSIV RFV+D FD NI+PTIGASFMTKTV NELHKFLIWD
Sbjct: 2 MAIRELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWD 61
Query: 61 TAGQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKC 120
TAGQERF +LAPMYYRGSAAA+IVYDITK+++F TLK WVKEL++HGP NIV+AIAGNKC
Sbjct: 62 TAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKC 121
Query: 121 DLIDVREVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRIPSTDANLPSGGKGF 180
DL D+REV +DAK+YA+SI AI VETSAKNAINI ELF ISR+IP D +
Sbjct: 122 DLSDIREVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQIPPLDPHENGNNGTI 181
Query: 181 KLRRQPSEPKRSCC 194
K+ + + R CC
Sbjct: 182 KVEKPTMQASRRCC 195
>gi|19923262 RAB5A, member RAS oncogene family [Homo sapiens]
Length = 215
Score = 191 bits (485), Expect = 3e-49
Identities = 95/194 (48%), Positives = 137/194 (70%), Gaps = 5/194 (2%)
Query: 5 ELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQ 64
+ K+ LLG++ VGKSS+V RFV+ F TIGA+F+T+TV + KF IWDTAGQ
Sbjct: 20 QFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQ 79
Query: 65 ERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLID 124
ER+ +LAPMYYRG+ AAI+VYDIT EE+F+ KNWVKEL++ PNIV+A++GNK DL +
Sbjct: 80 ERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLAN 139
Query: 125 VREVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRIPSTDANLPSG----GKGF 180
R V ++A+ YAD +F+ETSAK ++N+NE+F+ I++++P + P G+G
Sbjct: 140 KRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNPGANSARGRGV 199
Query: 181 KLRRQPSEPKRSCC 194
L +P++P R+ C
Sbjct: 200 DL-TEPTQPTRNQC 212
>gi|41393614 RAB5C, member RAS oncogene family isoform a [Homo
sapiens]
Length = 216
Score = 188 bits (478), Expect = 2e-48
Identities = 93/194 (47%), Positives = 130/194 (67%), Gaps = 4/194 (2%)
Query: 5 ELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQ 64
+ K+ LLG++ VGKSS+V RFV+ F TIGA+F+T+TV + KF IWDTAGQ
Sbjct: 21 QFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQ 80
Query: 65 ERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLID 124
ER+ +LAPMYYRG+ AAI+VYDIT +TF+ KNWVKEL++ PNIV+A+AGNK DL
Sbjct: 81 ERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLAS 140
Query: 125 VREVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRIPSTD----ANLPSGGKGF 180
R V ++A+ YAD +F+ETSAK A+N+NE+F+ I++++P + P +G
Sbjct: 141 KRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNATGAPGRNRGV 200
Query: 181 KLRRQPSEPKRSCC 194
L+ + CC
Sbjct: 201 DLQENNPASRSQCC 214
>gi|41393545 RAB5C, member RAS oncogene family isoform b [Homo
sapiens]
Length = 216
Score = 188 bits (478), Expect = 2e-48
Identities = 93/194 (47%), Positives = 130/194 (67%), Gaps = 4/194 (2%)
Query: 5 ELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQ 64
+ K+ LLG++ VGKSS+V RFV+ F TIGA+F+T+TV + KF IWDTAGQ
Sbjct: 21 QFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQ 80
Query: 65 ERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLID 124
ER+ +LAPMYYRG+ AAI+VYDIT +TF+ KNWVKEL++ PNIV+A+AGNK DL
Sbjct: 81 ERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLAS 140
Query: 125 VREVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRIPSTD----ANLPSGGKGF 180
R V ++A+ YAD +F+ETSAK A+N+NE+F+ I++++P + P +G
Sbjct: 141 KRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNATGAPGRNRGV 200
Query: 181 KLRRQPSEPKRSCC 194
L+ + CC
Sbjct: 201 DLQENNPASRSQCC 214
>gi|4506371 RAB5B, member RAS oncogene family [Homo sapiens]
Length = 215
Score = 187 bits (476), Expect = 4e-48
Identities = 93/194 (47%), Positives = 132/194 (68%), Gaps = 4/194 (2%)
Query: 5 ELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQ 64
+ K+ LLG++ VGKSS+V RFV+ F TIGA+F+T++V + KF IWDTAGQ
Sbjct: 20 QFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQ 79
Query: 65 ERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLID 124
ER+ +LAPMYYRG+ AAI+VYDIT +ETF+ K WVKEL++ P+IV+A+AGNK DL +
Sbjct: 80 ERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLAN 139
Query: 125 VREVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRIPSTDANLPSG----GKGF 180
R V +A+ YAD +F+ETSAK A+N+N+LF+ I++++P ++ G +G
Sbjct: 140 KRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQNLGGAAGRSRGV 199
Query: 181 KLRRQPSEPKRSCC 194
L Q + K CC
Sbjct: 200 DLHEQSQQNKSQCC 213
>gi|4758988 RAB1A, member RAS oncogene family isoform 1 [Homo
sapiens]
Length = 205
Score = 147 bits (370), Expect = 7e-36
Identities = 77/196 (39%), Positives = 120/196 (61%), Gaps = 11/196 (5%)
Query: 7 KVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQER 66
K+ L+GD+GVGKS ++ RF +D++ + TIG F +T++ + K IWDTAGQER
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQER 72
Query: 67 FRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVR 126
FR + YYRG+ I+VYD+T +E+F+ +K W++E+ ++ N+ + GNKCDL +
Sbjct: 73 FRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKK 132
Query: 127 EVMERDAKDYADSIHAIFVETSAKNAININELFI----EISRRI-PSTDANLPSGGKGFK 181
V AK++ADS+ F+ETSAKNA N+ + F+ EI +R+ P A G +
Sbjct: 133 VVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATA---GGAEKSN 189
Query: 182 LRRQPSEPKRS---CC 194
++ Q + K+S CC
Sbjct: 190 VKIQSTPVKQSGGGCC 205
>gi|21361418 RAB30, member RAS oncogene family [Homo sapiens]
Length = 203
Score = 146 bits (368), Expect = 1e-35
Identities = 68/162 (41%), Positives = 106/162 (65%)
Query: 7 KVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQER 66
K+ L+G+ GVGK+ +V RF + F P TIG FM KTV+ E K IWDTAGQER
Sbjct: 11 KIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQER 70
Query: 67 FRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVR 126
FR++ YYR + A I+ YDIT EE+F L W++E+ Q+ ++ + GNK DL + R
Sbjct: 71 FRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERR 130
Query: 127 EVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRIPS 168
EV ++ A++++++ ++ETSAK + N+ +LF++++ R+ S
Sbjct: 131 EVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRLIS 172
>gi|21361884 RAB2B protein isoform 1 [Homo sapiens]
Length = 216
Score = 145 bits (367), Expect = 2e-35
Identities = 77/185 (41%), Positives = 111/185 (60%), Gaps = 4/185 (2%)
Query: 7 KVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQER 66
K ++GDTGVGKS ++ +F + F P + TIG F + V + K IWDTAGQE
Sbjct: 8 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQES 67
Query: 67 FRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVR 126
FR++ YYRG+A A++VYDIT+ ETF+ L +W+++ RQH N+V+ + GNK DL R
Sbjct: 68 FRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLESRR 127
Query: 127 EVMERDAKDYADSIHAIFVETSAKNAININELFI----EISRRIPSTDANLPSGGKGFKL 182
+V + + +A IF+ETSAK A N+ E FI EI R+I ++ + G K+
Sbjct: 128 DVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQGLFDVHNEANGIKI 187
Query: 183 RRQPS 187
Q S
Sbjct: 188 GPQQS 192
>gi|190358517 RAB11B, member RAS oncogene family [Homo sapiens]
Length = 218
Score = 145 bits (367), Expect = 2e-35
Identities = 70/160 (43%), Positives = 102/160 (63%)
Query: 7 KVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQER 66
KV L+GD+GVGKS+++ RF + F+ TIG F T+++Q + K IWDTAGQER
Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQER 72
Query: 67 FRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVR 126
+RA+ YYRG+ A++VYDI K T+ ++ W+KELR H NIV+ + GNK DL +R
Sbjct: 73 YRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLR 132
Query: 127 EVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRI 166
V +A+ +A+ + F+ETSA ++ N+ E F I I
Sbjct: 133 AVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEI 172
>gi|16933567 mel transforming oncogene [Homo sapiens]
Length = 207
Score = 145 bits (366), Expect = 2e-35
Identities = 74/192 (38%), Positives = 114/192 (59%), Gaps = 8/192 (4%)
Query: 7 KVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQER 66
K+ L+GD+GVGK+ +++RF ED+F+ TIG F +T++ + K IWDTAGQER
Sbjct: 10 KLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQER 69
Query: 67 FRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVR 126
FR + YYRG+ ++VYDIT E++F ++NW++ + +H ++ I GNKCD+ D R
Sbjct: 70 FRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKR 129
Query: 127 EVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRIPS-----TDANLPSG-GKGF 180
+V + + A F+ETSAK IN+ F ++R I + + N P G +G
Sbjct: 130 QVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSPQGSNQGV 189
Query: 181 KLRRQPSEPKRS 192
K+ P + KRS
Sbjct: 190 KI--TPDQQKRS 199
>gi|19923231 RAB6A, member RAS oncogene family isoform a [Homo
sapiens]
Length = 208
Score = 145 bits (366), Expect = 2e-35
Identities = 66/169 (39%), Positives = 106/169 (62%)
Query: 3 LRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 62
LR+ K+ LG+ VGK+S++ RF+ DSFD TIG F++KT+ ++ + +WDTA
Sbjct: 11 LRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTA 70
Query: 63 GQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDL 122
GQERFR+L P Y R SAAA++VYDIT +F W+ ++R ++++ + GNK DL
Sbjct: 71 GQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDL 130
Query: 123 IDVREVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRIPSTDA 171
D R+V + + A ++ +F+ETSAK N+ +LF ++ +P ++
Sbjct: 131 ADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMES 179
>gi|7706563 RAB8B, member RAS oncogene family [Homo sapiens]
Length = 207
Score = 145 bits (366), Expect = 2e-35
Identities = 71/188 (37%), Positives = 111/188 (59%), Gaps = 6/188 (3%)
Query: 7 KVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQER 66
K+ L+GD+GVGK+ +++RF ED+F+ TIG F +T++ + K IWDTAGQER
Sbjct: 10 KLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQER 69
Query: 67 FRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVR 126
FR + YYRG+ ++VYDIT E++F +KNW++ + +H ++ I GNKCD+ D R
Sbjct: 70 FRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKR 129
Query: 127 EVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRIPS------TDANLPSGGKGF 180
+V + + A F+ETSAK++ N+ E F ++R I + D+N G
Sbjct: 130 QVSKERGEKLAIDYGIKFLETSAKSSANVEEAFFTLARDIMTKLNRKMNDSNSAGAGGPV 189
Query: 181 KLRRQPSE 188
K+ S+
Sbjct: 190 KITENRSK 197
>gi|13569962 RAB1B, member RAS oncogene family [Homo sapiens]
Length = 201
Score = 144 bits (364), Expect = 4e-35
Identities = 72/191 (37%), Positives = 114/191 (59%), Gaps = 3/191 (1%)
Query: 7 KVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQER 66
K+ L+GD+GVGKS ++ RF +D++ + TIG F +T++ + K IWDTAGQER
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQER 69
Query: 67 FRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVR 126
FR + YYRG+ I+VYD+T +E+++ +K W++E+ ++ N+ + GNK DL +
Sbjct: 70 FRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKK 129
Query: 127 EVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRIPS-TDANLPSGGK--GFKLR 183
V AK++ADS+ F+ETSAKNA N+ + F+ ++ I SGG+ K+
Sbjct: 130 VVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGERPNLKID 189
Query: 184 RQPSEPKRSCC 194
P +P C
Sbjct: 190 STPVKPAGGGC 200
>gi|7661922 RAB21, member RAS oncogene family [Homo sapiens]
Length = 225
Score = 144 bits (362), Expect = 6e-35
Identities = 80/173 (46%), Positives = 108/173 (62%), Gaps = 1/173 (0%)
Query: 7 KVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQER 66
KV LLG+ VGK+S+V R+ E+ F+ T+ ASF+TK + + IWDTAGQER
Sbjct: 21 KVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQER 80
Query: 67 FRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVR 126
F AL P+YYR S AI+VYDIT E++F +KNWVKELR+ I + I GNK DL R
Sbjct: 81 FHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKER 140
Query: 127 EVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRIPSTDANLPSGGKG 179
V ++A+ YA+S+ A TSAK I ELF+++ +R+ T A + KG
Sbjct: 141 HVSIQEAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIET-AQVDERAKG 192
>gi|4506365 RAB2A, member RAS oncogene family [Homo sapiens]
Length = 212
Score = 142 bits (359), Expect = 1e-34
Identities = 69/160 (43%), Positives = 101/160 (63%)
Query: 7 KVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQER 66
K ++GDTGVGKS ++ +F + F P + TIG F + + + K IWDTAGQE
Sbjct: 8 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQES 67
Query: 67 FRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVR 126
FR++ YYRG+A A++VYDIT+ +TF+ L W+++ RQH N+V+ + GNK DL R
Sbjct: 68 FRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRR 127
Query: 127 EVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRI 166
EV + + + +A IF+ETSAK A N+ E FI ++ I
Sbjct: 128 EVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEI 167
>gi|96975097 RAB6B, member RAS oncogene family [Homo sapiens]
Length = 208
Score = 142 bits (359), Expect = 1e-34
Identities = 70/193 (36%), Positives = 111/193 (57%), Gaps = 4/193 (2%)
Query: 3 LRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 62
LR+ K+ LG+ VGK+S++ RF+ DSFD TIG F++KT+ ++ + +WDTA
Sbjct: 11 LRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 70
Query: 63 GQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDL 122
GQERFR+L P Y R S A++VYDIT +F W+ ++R ++++ + GNK DL
Sbjct: 71 GQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDL 130
Query: 123 IDVREVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRIPSTDANLPSGGKG--- 179
D R++ + + A + +F+ETSAK N+ +LF ++ +P + +G
Sbjct: 131 ADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASALPGMENVQEKSKEGMID 190
Query: 180 FKLRRQPSEPKRS 192
KL + P EP S
Sbjct: 191 IKLDK-PQEPPAS 202
>gi|38679888 RAB6A, member RAS oncogene family isoform b [Homo
sapiens]
Length = 208
Score = 142 bits (358), Expect = 2e-34
Identities = 64/169 (37%), Positives = 104/169 (61%)
Query: 3 LRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 62
LR+ K+ LG+ VGK+S++ RF+ DSFD TIG F++KT+ ++ + +WDTA
Sbjct: 11 LRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 70
Query: 63 GQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDL 122
GQERFR+L P Y R S A++VYDIT +F W+ ++R ++++ + GNK DL
Sbjct: 71 GQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDL 130
Query: 123 IDVREVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRIPSTDA 171
D R+V + + A ++ +F+ETSAK N+ +LF ++ +P ++
Sbjct: 131 ADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMES 179
>gi|19923483 GTPase Rab14 [Homo sapiens]
Length = 215
Score = 142 bits (357), Expect = 2e-34
Identities = 75/201 (37%), Positives = 113/201 (56%), Gaps = 14/201 (6%)
Query: 7 KVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQER 66
K ++GD GVGKS ++ +F E F + TIG F T+ ++ + K IWDTAGQER
Sbjct: 13 KYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQER 72
Query: 67 FRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVR 126
FRA+ YYRG+A A++VYDIT+ T++ L +W+ + R PN V+ + GNK DL R
Sbjct: 73 FRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEAQR 132
Query: 127 EVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRI------PSTDANL------- 173
+V +AK +A+ +F+E SAK N+ + F+E +++I S D N
Sbjct: 133 DVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLDLNAAESGVQH 192
Query: 174 -PSGGKGFKLRRQPSEPKRSC 193
PS +G +L +P + C
Sbjct: 193 KPSAPQGGRLTSEPQPQREGC 213
>gi|4758984 Ras-related protein Rab-11A [Homo sapiens]
Length = 216
Score = 142 bits (357), Expect = 2e-34
Identities = 69/160 (43%), Positives = 100/160 (62%)
Query: 7 KVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQER 66
KV L+GD+GVGKS+++ RF + F+ TIG F T+++Q + K IWDTAGQER
Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQER 72
Query: 67 FRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVR 126
+RA+ YYRG+ A++VYDI K T+ ++ W+KELR H NIV+ + GNK DL +R
Sbjct: 73 YRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLR 132
Query: 127 EVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRI 166
V +A+ +A+ F+ETSA ++ N+ F I I
Sbjct: 133 AVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEI 172
>gi|116812567 RAB25 [Homo sapiens]
Length = 213
Score = 139 bits (351), Expect = 1e-33
Identities = 74/197 (37%), Positives = 115/197 (58%), Gaps = 9/197 (4%)
Query: 7 KVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQER 66
KV L+G++GVGK++++ RF + F + TIG F T+TV K IWDTAG ER
Sbjct: 14 KVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLER 73
Query: 67 FRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVR 126
+RA+ YYRG+ A++V+D+TK +T++ ++ W+KEL H IVV + GNK DL R
Sbjct: 74 YRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAR 133
Query: 127 EVMERDAKDYADSIHAIFVETSAKNAINI--------NELFIEISR-RIPSTDANLPSGG 177
EV +A+ +A++ +F+ETSA ++ N+ E+F ++S+ R S N + G
Sbjct: 134 EVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQRQNSIRTNAITLG 193
Query: 178 KGFKLRRQPSEPKRSCC 194
+ KR+CC
Sbjct: 194 SAQAGQEPGPGEKRACC 210
>gi|4506363 RAB13, member RAS oncogene family [Homo sapiens]
Length = 203
Score = 139 bits (351), Expect = 1e-33
Identities = 71/188 (37%), Positives = 112/188 (59%), Gaps = 6/188 (3%)
Query: 7 KVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQER 66
K+ L+GD+GVGK+ ++ RF ED+F+ TIG F +TV + + K +WDTAGQER
Sbjct: 10 KLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQER 69
Query: 67 FRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVR 126
F+ + YYRG+ I+VYDIT E++F ++NW+K ++++ + + GNKCD+ R
Sbjct: 70 FKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKR 129
Query: 127 EVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRIPSTDANLPSGG-KGFKLRRQ 185
+V + A A F ETSAK+++N++E F ++R D L SGG + +
Sbjct: 130 KVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLAR-----DILLKSGGRRSGNGNKP 184
Query: 186 PSEPKRSC 193
PS ++C
Sbjct: 185 PSTDLKTC 192
>gi|10880989 RAB18, member RAS oncogene family [Homo sapiens]
Length = 206
Score = 139 bits (350), Expect = 2e-33
Identities = 77/195 (39%), Positives = 106/195 (54%), Gaps = 4/195 (2%)
Query: 3 LRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 62
L LK+ ++G++GVGKSS++ RF +D+FDP + TIG F KT+ K IWDTA
Sbjct: 6 LTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTA 65
Query: 63 GQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPN-IVVAIAGNKCD 121
GQERFR L P YYRG+ I+VYD+T+ +TF L NW+ EL + N IV + GNK D
Sbjct: 66 GQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVGNKID 125
Query: 122 LIDVREVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRIPSTDA--NLPSGGKG 179
+ REV + +A +F+E SAK + F E+ +I T + KG
Sbjct: 126 K-ENREVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESENQNKG 184
Query: 180 FKLRRQPSEPKRSCC 194
KL + C
Sbjct: 185 VKLSHREEGQGGGAC 199
>gi|169204777 PREDICTED: similar to RAB13, member RAS oncogene
family [Homo sapiens]
Length = 327
Score = 137 bits (344), Expect = 7e-33
Identities = 70/188 (37%), Positives = 110/188 (58%), Gaps = 6/188 (3%)
Query: 7 KVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQER 66
K+ L+GD+GVGK+ ++ RF ED+F+ TIG F +TV + + K +WDTAGQER
Sbjct: 134 KLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQER 193
Query: 67 FRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVR 126
F+ + YYRG+ I+ YDIT E++F ++NW+K + ++ + + GNKCD+ R
Sbjct: 194 FKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAGVEHLLLGNKCDMEAKR 253
Query: 127 EVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRIPSTDANLPSGG-KGFKLRRQ 185
+V + A A F ETSAK+++N++E F ++R D L SGG + +
Sbjct: 254 KVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLAR-----DILLKSGGRRSGNGNKP 308
Query: 186 PSEPKRSC 193
PS ++C
Sbjct: 309 PSTDLKTC 316
>gi|169205558 PREDICTED: similar to hCG24991 [Homo sapiens]
Length = 327
Score = 137 bits (344), Expect = 7e-33
Identities = 70/188 (37%), Positives = 110/188 (58%), Gaps = 6/188 (3%)
Query: 7 KVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQER 66
K+ L+GD+GVGK+ ++ RF ED+F+ TIG F +TV + + K +WDTAGQER
Sbjct: 134 KLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQER 193
Query: 67 FRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVR 126
F+ + YYRG+ I+ YDIT E++F ++NW+K + ++ + + GNKCD+ R
Sbjct: 194 FKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAGVEHLLLGNKCDMEAKR 253
Query: 127 EVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRIPSTDANLPSGG-KGFKLRRQ 185
+V + A A F ETSAK+++N++E F ++R D L SGG + +
Sbjct: 254 KVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLAR-----DILLKSGGRRSGNGNKP 308
Query: 186 PSEPKRSC 193
PS ++C
Sbjct: 309 PSTDLKTC 316
>gi|169204174 PREDICTED: similar to hCG24991 [Homo sapiens]
Length = 327
Score = 137 bits (344), Expect = 7e-33
Identities = 70/188 (37%), Positives = 110/188 (58%), Gaps = 6/188 (3%)
Query: 7 KVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQER 66
K+ L+GD+GVGK+ ++ RF ED+F+ TIG F +TV + + K +WDTAGQER
Sbjct: 134 KLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQER 193
Query: 67 FRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVR 126
F+ + YYRG+ I+ YDIT E++F ++NW+K + ++ + + GNKCD+ R
Sbjct: 194 FKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAGVEHLLLGNKCDMEAKR 253
Query: 127 EVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRIPSTDANLPSGG-KGFKLRRQ 185
+V + A A F ETSAK+++N++E F ++R D L SGG + +
Sbjct: 254 KVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLAR-----DILLKSGGRRSGNGNKP 308
Query: 186 PSEPKRSC 193
PS ++C
Sbjct: 309 PSTDLKTC 316
>gi|19923260 RAB4A, member RAS oncogene family [Homo sapiens]
Length = 218
Score = 136 bits (343), Expect = 1e-32
Identities = 67/160 (41%), Positives = 98/160 (61%)
Query: 7 KVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQER 66
K ++G+ G GKS ++ +F+E F + N TIG F +K + + K IWDTAGQER
Sbjct: 15 KFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAGQER 74
Query: 67 FRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVR 126
FR++ YYRG+A A++VYDIT ET++ L NW+ + R NIV+ + GNK DL R
Sbjct: 75 FRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKKDLDADR 134
Query: 127 EVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRI 166
EV +A +A +F+ETSA N+ E F++ +R+I
Sbjct: 135 EVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKI 174
>gi|82659107 ras-related GTP-binding protein 4b [Homo sapiens]
Length = 213
Score = 135 bits (341), Expect = 2e-32
Identities = 68/160 (42%), Positives = 98/160 (61%)
Query: 7 KVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQER 66
K ++G G GKS ++ +F+E+ F + N TIG F ++ V + K IWDTAGQER
Sbjct: 10 KFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAGQER 69
Query: 67 FRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVR 126
FR++ YYRG+A A++VYDIT ET+++L W+ + R PNIVV + GNK DL R
Sbjct: 70 FRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKKDLDPER 129
Query: 127 EVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRI 166
EV +A +A +F+ETSA N+ E F++ +R I
Sbjct: 130 EVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTI 169
>gi|117938299 RAB6C-like [Homo sapiens]
Length = 254
Score = 135 bits (340), Expect = 2e-32
Identities = 63/169 (37%), Positives = 100/169 (59%)
Query: 3 LRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 62
LR+ K+ LG+ V K+S++ RF DSFD IG F++KT+ ++ +WDTA
Sbjct: 11 LRKFKLVFLGEQSVAKTSLITRFRYDSFDNTYQAIIGIDFLSKTMYLEDGTIGLRLWDTA 70
Query: 63 GQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDL 122
GQER R+L P Y R SAAA++VYDIT +F W+ ++R G ++++ + GNK DL
Sbjct: 71 GQERLRSLIPRYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTEGGSDVIITLVGNKTDL 130
Query: 123 IDVREVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRIPSTDA 171
D R+V + + A ++ F+ET AK N+ +LF ++ +P ++
Sbjct: 131 ADKRQVSIEEGERKAKGLNVTFIETRAKAGYNVKQLFRRVAAALPGMES 179
>gi|4506367 RAB3A, member RAS oncogene family [Homo sapiens]
Length = 220
Score = 135 bits (339), Expect = 3e-32
Identities = 67/195 (34%), Positives = 110/195 (56%), Gaps = 8/195 (4%)
Query: 7 KVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQER 66
K+ ++G++ VGK+S ++R+ +DSF P T+G F KT+ ++ K IWDTAGQER
Sbjct: 24 KILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQER 83
Query: 67 FRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVR 126
+R + YYRG+ I++YDIT EE+F+ +++W +++ + N V + GNKCD+ D R
Sbjct: 84 YRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDER 143
Query: 127 EVMERDAKDYADSIHAIFVETSAKNAININELF--------IEISRRIPSTDANLPSGGK 178
V + AD + F E SAK+ IN+ + F ++S + + D + +
Sbjct: 144 VVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSESLDTADPAVTGAKQ 203
Query: 179 GFKLRRQPSEPKRSC 193
G +L Q P + C
Sbjct: 204 GPQLSDQQVPPHQDC 218
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.135 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,415,546
Number of Sequences: 37866
Number of extensions: 287672
Number of successful extensions: 1047
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 213
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 649
Number of HSP's gapped (non-prelim): 239
length of query: 194
length of database: 18,247,518
effective HSP length: 97
effective length of query: 97
effective length of database: 14,574,516
effective search space: 1413728052
effective search space used: 1413728052
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.