Guide to the Human Genome
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Name: MRPS31 Sequence: fasta or formatted (395aa) NCBI GI: 186928854
Description:

mitochondrial ribosomal protein S31

Referenced in:

Ribosomes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.8         23           3
 C cysteine            0.5          2           1
 D aspartate           4.6         18           3
 E glutamate           9.4         37           3
 F phenylalanine       4.8         19           1
 G glycine             3.8         15           1
 H histidine           2.0          8           1
 I isoleucine          4.8         19           2
 K lysine              9.4         37           2
 L leucine             8.9         35           2
 M methionine          1.8          7           2
 N asparagine          4.6         18           2
 P proline             5.6         22           2
 Q glutamine           4.3         17           2
 R arginine            7.1         28           2
 S serine              8.9         35           2
 T threonine           6.6         26           2
 V valine              4.6         18           1
 W tryptophan          1.0          4           1
 Y tyrosine            1.8          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   mitochondrial ribosomal protein S31 
ANK3                  0.017   ankyrin 3 isoform 1 
C6orf103              0.017   hypothetical protein LOC79747 
SMC4                  0.014   SMC4 structural maintenance of chromosomes 4-like 1 ...
SMC4                  0.014   SMC4 structural maintenance of chromosomes 4-like 1 ...
PPL                   0.014   periplakin 
CEP110                0.014   centrosomal protein 110kDa 
LAMA2                 0.014   laminin alpha 2 subunit isoform b precursor 
LAMA2                 0.014   laminin alpha 2 subunit isoform a precursor 
EEA1                  0.013   early endosome antigen 1, 162kD 
INCENP                0.012   inner centromere protein antigens 135/155kDa isofor...
INCENP                0.012   inner centromere protein antigens 135/155kDa isofor...
TDRD6                 0.012   tudor domain containing 6 
SECISBP2L             0.012   SECIS binding protein 2-like 
BRCA1                 0.011   breast cancer 1, early onset isoform 3 
BRCA1                 0.011   breast cancer 1, early onset isoform 1 
BSN                   0.011   bassoon protein 
SLCO2B1               0.011   solute carrier organic anion transporter family, me...
SLCO2B1               0.011   solute carrier organic anion transporter family, me...
SLCO2B1               0.011   solute carrier organic anion transporter family, memb...
NOLC1                 0.011   nucleolar and coiled-body phosphoprotein 1 
STX2                  0.011   syntaxin 2 isoform 1 
STX2                  0.011   syntaxin 2 isoform 2 
MPHOSPH8              0.009   M-phase phosphoprotein 8 
RBBP6                 0.009   retinoblastoma-binding protein 6 isoform 2 
RBBP6                 0.009   retinoblastoma-binding protein 6 isoform 1 
ARID4A                0.009   retinoblastoma-binding protein 1 isoform III 
ARID4A                0.009   retinoblastoma-binding protein 1 isoform II 
ARID4A                0.009   retinoblastoma-binding protein 1 isoform I 
SEC62                 0.009   translocation protein 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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