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Search of human proteins with 18375630
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|18375630 HLA-B associated transcript-3 isoform b [Homo
sapiens]
(1126 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|149158696 HLA-B associated transcript-3 isoform b [Homo sapiens] 2271 0.0
gi|18375632 HLA-B associated transcript-3 isoform b [Homo sapiens] 2271 0.0
gi|18375630 HLA-B associated transcript-3 isoform b [Homo sapiens] 2271 0.0
gi|149158692 HLA-B associated transcript-3 isoform a [Homo sapiens] 2265 0.0
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] 86 2e-16
gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre... 84 6e-16
gi|163965366 nascent polypeptide-associated complex alpha subuni... 84 6e-16
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 82 3e-15
gi|46852161 methyl-CpG binding domain protein 6 [Homo sapiens] 81 6e-15
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 80 1e-14
gi|47132519 Ras association and pleckstrin homology domains 1 is... 79 2e-14
gi|122937496 WAS/WASL interacting protein family, member 3 [Homo... 79 2e-14
gi|42544125 splicing factor 1 isoform 2 [Homo sapiens] 79 2e-14
gi|42544130 splicing factor 1 isoform 1 [Homo sapiens] 79 2e-14
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 79 3e-14
gi|110832843 TBP-associated factor 4 [Homo sapiens] 79 3e-14
gi|117306167 proline-rich protein BstNI subfamily 3 precursor [H... 76 2e-13
gi|160707881 formin 2 [Homo sapiens] 75 3e-13
gi|116008152 alpha 1 type XV collagen precursor [Homo sapiens] 75 5e-13
gi|119829187 alpha 1 type XVII collagen [Homo sapiens] 73 1e-12
gi|153792074 proline rich 12 [Homo sapiens] 73 1e-12
gi|163914392 glioma tumor suppressor candidate region gene 1 [Ho... 71 5e-12
gi|224451135 splicing factor, arginine/serine-rich 15 isoform 3 ... 70 9e-12
gi|48762934 alpha 2 type I collagen [Homo sapiens] 70 1e-11
gi|192807323 SWI/SNF-related matrix-associated actin-dependent r... 69 3e-11
gi|192807320 SWI/SNF-related matrix-associated actin-dependent r... 69 3e-11
gi|192807318 SWI/SNF-related matrix-associated actin-dependent r... 69 3e-11
gi|192807316 SWI/SNF-related matrix-associated actin-dependent r... 69 3e-11
gi|192807314 SWI/SNF-related matrix-associated actin-dependent r... 69 3e-11
gi|192807312 SWI/SNF-related matrix-associated actin-dependent r... 69 3e-11
>gi|149158696 HLA-B associated transcript-3 isoform b [Homo sapiens]
Length = 1126
Score = 2271 bits (5886), Expect = 0.0
Identities = 1126/1126 (100%), Positives = 1126/1126 (100%)
Query: 1 MEPNDSTSTAVEEPDSLEVLVKTLDSQTRTFIVGAQMNVKEFKEHIAASVSIPSEKQRLI 60
MEPNDSTSTAVEEPDSLEVLVKTLDSQTRTFIVGAQMNVKEFKEHIAASVSIPSEKQRLI
Sbjct: 1 MEPNDSTSTAVEEPDSLEVLVKTLDSQTRTFIVGAQMNVKEFKEHIAASVSIPSEKQRLI 60
Query: 61 YQGRVLQDDKKLQEYNVGGKVIHLVERAPPQTHLPSGASSGTGSASATHGGGSPPGTRGP 120
YQGRVLQDDKKLQEYNVGGKVIHLVERAPPQTHLPSGASSGTGSASATHGGGSPPGTRGP
Sbjct: 61 YQGRVLQDDKKLQEYNVGGKVIHLVERAPPQTHLPSGASSGTGSASATHGGGSPPGTRGP 120
Query: 121 GASVHDRNANSYVMVGTFNLPSDGSAVDVHINMEQAPIQSEPRVRLVMAQHMIRDIQTLL 180
GASVHDRNANSYVMVGTFNLPSDGSAVDVHINMEQAPIQSEPRVRLVMAQHMIRDIQTLL
Sbjct: 121 GASVHDRNANSYVMVGTFNLPSDGSAVDVHINMEQAPIQSEPRVRLVMAQHMIRDIQTLL 180
Query: 181 SRMECRGGPQPQHSQPPPQPPAVTPEPVALSSQTSEPVESEAPPREPMEAEEVEERAPAQ 240
SRMECRGGPQPQHSQPPPQPPAVTPEPVALSSQTSEPVESEAPPREPMEAEEVEERAPAQ
Sbjct: 181 SRMECRGGPQPQHSQPPPQPPAVTPEPVALSSQTSEPVESEAPPREPMEAEEVEERAPAQ 240
Query: 241 NPELTPGPAPAGPTPAPETNAPNHPSPAEYVEVLQELQRLESRLQPFLQRYYEVLGAAAT 300
NPELTPGPAPAGPTPAPETNAPNHPSPAEYVEVLQELQRLESRLQPFLQRYYEVLGAAAT
Sbjct: 241 NPELTPGPAPAGPTPAPETNAPNHPSPAEYVEVLQELQRLESRLQPFLQRYYEVLGAAAT 300
Query: 301 TDYNNNHEGREEDQRLINLVGESLRLLGNTFVALSDLRCNLACTPPRHLHVVRPMSHYTT 360
TDYNNNHEGREEDQRLINLVGESLRLLGNTFVALSDLRCNLACTPPRHLHVVRPMSHYTT
Sbjct: 301 TDYNNNHEGREEDQRLINLVGESLRLLGNTFVALSDLRCNLACTPPRHLHVVRPMSHYTT 360
Query: 361 PMVLQQAAIPIQINVGTTVTMTGNGTRPPPTPNAEAPPPGPGQASSVAPSSTNVESSAEG 420
PMVLQQAAIPIQINVGTTVTMTGNGTRPPPTPNAEAPPPGPGQASSVAPSSTNVESSAEG
Sbjct: 361 PMVLQQAAIPIQINVGTTVTMTGNGTRPPPTPNAEAPPPGPGQASSVAPSSTNVESSAEG 420
Query: 421 APPPGPAPPPATSHPRVIRISHQSVEPVVMMHMNIQDSGTQPGGVPSAPTGPLGPPGHGQ 480
APPPGPAPPPATSHPRVIRISHQSVEPVVMMHMNIQDSGTQPGGVPSAPTGPLGPPGHGQ
Sbjct: 421 APPPGPAPPPATSHPRVIRISHQSVEPVVMMHMNIQDSGTQPGGVPSAPTGPLGPPGHGQ 480
Query: 481 TLGQQVPGFPTAPTRVVIARPTPPQARPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLVG 540
TLGQQVPGFPTAPTRVVIARPTPPQARPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLVG
Sbjct: 481 TLGQQVPGFPTAPTRVVIARPTPPQARPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLVG 540
Query: 541 QLLMQPVLVAQGTPGMAPPPAPATASASAGTTNTATTAGPAPGGPAQPPPTPQPSMADLQ 600
QLLMQPVLVAQGTPGMAPPPAPATASASAGTTNTATTAGPAPGGPAQPPPTPQPSMADLQ
Sbjct: 541 QLLMQPVLVAQGTPGMAPPPAPATASASAGTTNTATTAGPAPGGPAQPPPTPQPSMADLQ 600
Query: 601 FSQLLGNLLGPAGPGAGGSGVASPTITVAMPGVPAFLQGMTDFLQATQTAPPPPPPPPPP 660
FSQLLGNLLGPAGPGAGGSGVASPTITVAMPGVPAFLQGMTDFLQATQTAPPPPPPPPPP
Sbjct: 601 FSQLLGNLLGPAGPGAGGSGVASPTITVAMPGVPAFLQGMTDFLQATQTAPPPPPPPPPP 660
Query: 661 PPAPEQQTMPPPGSPSGGAGSPGGLGLESLSPEFFTSVVQGVLSSLLGSLGARAGSSESI 720
PPAPEQQTMPPPGSPSGGAGSPGGLGLESLSPEFFTSVVQGVLSSLLGSLGARAGSSESI
Sbjct: 661 PPAPEQQTMPPPGSPSGGAGSPGGLGLESLSPEFFTSVVQGVLSSLLGSLGARAGSSESI 720
Query: 721 AAFIQRLSGSSNIFEPGADGALGFFGALLSLLCQNFSMVDVVMLLHGHFQPLQRLQPQLR 780
AAFIQRLSGSSNIFEPGADGALGFFGALLSLLCQNFSMVDVVMLLHGHFQPLQRLQPQLR
Sbjct: 721 AAFIQRLSGSSNIFEPGADGALGFFGALLSLLCQNFSMVDVVMLLHGHFQPLQRLQPQLR 780
Query: 781 SFFHQHYLGGQEPTPSNIRMATHTLITGLEEYVRESFSLVQVQPGVDIIRTNLEFLQEQF 840
SFFHQHYLGGQEPTPSNIRMATHTLITGLEEYVRESFSLVQVQPGVDIIRTNLEFLQEQF
Sbjct: 781 SFFHQHYLGGQEPTPSNIRMATHTLITGLEEYVRESFSLVQVQPGVDIIRTNLEFLQEQF 840
Query: 841 NSIAAHVLHCTDSGFGARLLELCNQGLFECLALNLHCLGGQQMELAAVINGRIRRMSRGV 900
NSIAAHVLHCTDSGFGARLLELCNQGLFECLALNLHCLGGQQMELAAVINGRIRRMSRGV
Sbjct: 841 NSIAAHVLHCTDSGFGARLLELCNQGLFECLALNLHCLGGQQMELAAVINGRIRRMSRGV 900
Query: 901 NPSLVSWLTTMMGLRLQVVLEHMPVGPDAILRYVRRVGDPPQPLPEEPMEVQGAERASPE 960
NPSLVSWLTTMMGLRLQVVLEHMPVGPDAILRYVRRVGDPPQPLPEEPMEVQGAERASPE
Sbjct: 901 NPSLVSWLTTMMGLRLQVVLEHMPVGPDAILRYVRRVGDPPQPLPEEPMEVQGAERASPE 960
Query: 961 PQRENASPAPGTTAEEAMSRGPPPAPEGGSRDEQDGASAETEPWAAAVPPEWVPIIQQDI 1020
PQRENASPAPGTTAEEAMSRGPPPAPEGGSRDEQDGASAETEPWAAAVPPEWVPIIQQDI
Sbjct: 961 PQRENASPAPGTTAEEAMSRGPPPAPEGGSRDEQDGASAETEPWAAAVPPEWVPIIQQDI 1020
Query: 1021 QSQRKVKPQPPLSDAYLSGMPAKRRKTMQGEGPQLLLSEAVSRAAKAAGARPLTSPESLS 1080
QSQRKVKPQPPLSDAYLSGMPAKRRKTMQGEGPQLLLSEAVSRAAKAAGARPLTSPESLS
Sbjct: 1021 QSQRKVKPQPPLSDAYLSGMPAKRRKTMQGEGPQLLLSEAVSRAAKAAGARPLTSPESLS 1080
Query: 1081 RDLEAPEVQESYRQQLRSDIQKRLQEDPNYSPQRFPNAQRAFADDP 1126
RDLEAPEVQESYRQQLRSDIQKRLQEDPNYSPQRFPNAQRAFADDP
Sbjct: 1081 RDLEAPEVQESYRQQLRSDIQKRLQEDPNYSPQRFPNAQRAFADDP 1126
>gi|18375632 HLA-B associated transcript-3 isoform b [Homo sapiens]
Length = 1126
Score = 2271 bits (5886), Expect = 0.0
Identities = 1126/1126 (100%), Positives = 1126/1126 (100%)
Query: 1 MEPNDSTSTAVEEPDSLEVLVKTLDSQTRTFIVGAQMNVKEFKEHIAASVSIPSEKQRLI 60
MEPNDSTSTAVEEPDSLEVLVKTLDSQTRTFIVGAQMNVKEFKEHIAASVSIPSEKQRLI
Sbjct: 1 MEPNDSTSTAVEEPDSLEVLVKTLDSQTRTFIVGAQMNVKEFKEHIAASVSIPSEKQRLI 60
Query: 61 YQGRVLQDDKKLQEYNVGGKVIHLVERAPPQTHLPSGASSGTGSASATHGGGSPPGTRGP 120
YQGRVLQDDKKLQEYNVGGKVIHLVERAPPQTHLPSGASSGTGSASATHGGGSPPGTRGP
Sbjct: 61 YQGRVLQDDKKLQEYNVGGKVIHLVERAPPQTHLPSGASSGTGSASATHGGGSPPGTRGP 120
Query: 121 GASVHDRNANSYVMVGTFNLPSDGSAVDVHINMEQAPIQSEPRVRLVMAQHMIRDIQTLL 180
GASVHDRNANSYVMVGTFNLPSDGSAVDVHINMEQAPIQSEPRVRLVMAQHMIRDIQTLL
Sbjct: 121 GASVHDRNANSYVMVGTFNLPSDGSAVDVHINMEQAPIQSEPRVRLVMAQHMIRDIQTLL 180
Query: 181 SRMECRGGPQPQHSQPPPQPPAVTPEPVALSSQTSEPVESEAPPREPMEAEEVEERAPAQ 240
SRMECRGGPQPQHSQPPPQPPAVTPEPVALSSQTSEPVESEAPPREPMEAEEVEERAPAQ
Sbjct: 181 SRMECRGGPQPQHSQPPPQPPAVTPEPVALSSQTSEPVESEAPPREPMEAEEVEERAPAQ 240
Query: 241 NPELTPGPAPAGPTPAPETNAPNHPSPAEYVEVLQELQRLESRLQPFLQRYYEVLGAAAT 300
NPELTPGPAPAGPTPAPETNAPNHPSPAEYVEVLQELQRLESRLQPFLQRYYEVLGAAAT
Sbjct: 241 NPELTPGPAPAGPTPAPETNAPNHPSPAEYVEVLQELQRLESRLQPFLQRYYEVLGAAAT 300
Query: 301 TDYNNNHEGREEDQRLINLVGESLRLLGNTFVALSDLRCNLACTPPRHLHVVRPMSHYTT 360
TDYNNNHEGREEDQRLINLVGESLRLLGNTFVALSDLRCNLACTPPRHLHVVRPMSHYTT
Sbjct: 301 TDYNNNHEGREEDQRLINLVGESLRLLGNTFVALSDLRCNLACTPPRHLHVVRPMSHYTT 360
Query: 361 PMVLQQAAIPIQINVGTTVTMTGNGTRPPPTPNAEAPPPGPGQASSVAPSSTNVESSAEG 420
PMVLQQAAIPIQINVGTTVTMTGNGTRPPPTPNAEAPPPGPGQASSVAPSSTNVESSAEG
Sbjct: 361 PMVLQQAAIPIQINVGTTVTMTGNGTRPPPTPNAEAPPPGPGQASSVAPSSTNVESSAEG 420
Query: 421 APPPGPAPPPATSHPRVIRISHQSVEPVVMMHMNIQDSGTQPGGVPSAPTGPLGPPGHGQ 480
APPPGPAPPPATSHPRVIRISHQSVEPVVMMHMNIQDSGTQPGGVPSAPTGPLGPPGHGQ
Sbjct: 421 APPPGPAPPPATSHPRVIRISHQSVEPVVMMHMNIQDSGTQPGGVPSAPTGPLGPPGHGQ 480
Query: 481 TLGQQVPGFPTAPTRVVIARPTPPQARPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLVG 540
TLGQQVPGFPTAPTRVVIARPTPPQARPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLVG
Sbjct: 481 TLGQQVPGFPTAPTRVVIARPTPPQARPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLVG 540
Query: 541 QLLMQPVLVAQGTPGMAPPPAPATASASAGTTNTATTAGPAPGGPAQPPPTPQPSMADLQ 600
QLLMQPVLVAQGTPGMAPPPAPATASASAGTTNTATTAGPAPGGPAQPPPTPQPSMADLQ
Sbjct: 541 QLLMQPVLVAQGTPGMAPPPAPATASASAGTTNTATTAGPAPGGPAQPPPTPQPSMADLQ 600
Query: 601 FSQLLGNLLGPAGPGAGGSGVASPTITVAMPGVPAFLQGMTDFLQATQTAPPPPPPPPPP 660
FSQLLGNLLGPAGPGAGGSGVASPTITVAMPGVPAFLQGMTDFLQATQTAPPPPPPPPPP
Sbjct: 601 FSQLLGNLLGPAGPGAGGSGVASPTITVAMPGVPAFLQGMTDFLQATQTAPPPPPPPPPP 660
Query: 661 PPAPEQQTMPPPGSPSGGAGSPGGLGLESLSPEFFTSVVQGVLSSLLGSLGARAGSSESI 720
PPAPEQQTMPPPGSPSGGAGSPGGLGLESLSPEFFTSVVQGVLSSLLGSLGARAGSSESI
Sbjct: 661 PPAPEQQTMPPPGSPSGGAGSPGGLGLESLSPEFFTSVVQGVLSSLLGSLGARAGSSESI 720
Query: 721 AAFIQRLSGSSNIFEPGADGALGFFGALLSLLCQNFSMVDVVMLLHGHFQPLQRLQPQLR 780
AAFIQRLSGSSNIFEPGADGALGFFGALLSLLCQNFSMVDVVMLLHGHFQPLQRLQPQLR
Sbjct: 721 AAFIQRLSGSSNIFEPGADGALGFFGALLSLLCQNFSMVDVVMLLHGHFQPLQRLQPQLR 780
Query: 781 SFFHQHYLGGQEPTPSNIRMATHTLITGLEEYVRESFSLVQVQPGVDIIRTNLEFLQEQF 840
SFFHQHYLGGQEPTPSNIRMATHTLITGLEEYVRESFSLVQVQPGVDIIRTNLEFLQEQF
Sbjct: 781 SFFHQHYLGGQEPTPSNIRMATHTLITGLEEYVRESFSLVQVQPGVDIIRTNLEFLQEQF 840
Query: 841 NSIAAHVLHCTDSGFGARLLELCNQGLFECLALNLHCLGGQQMELAAVINGRIRRMSRGV 900
NSIAAHVLHCTDSGFGARLLELCNQGLFECLALNLHCLGGQQMELAAVINGRIRRMSRGV
Sbjct: 841 NSIAAHVLHCTDSGFGARLLELCNQGLFECLALNLHCLGGQQMELAAVINGRIRRMSRGV 900
Query: 901 NPSLVSWLTTMMGLRLQVVLEHMPVGPDAILRYVRRVGDPPQPLPEEPMEVQGAERASPE 960
NPSLVSWLTTMMGLRLQVVLEHMPVGPDAILRYVRRVGDPPQPLPEEPMEVQGAERASPE
Sbjct: 901 NPSLVSWLTTMMGLRLQVVLEHMPVGPDAILRYVRRVGDPPQPLPEEPMEVQGAERASPE 960
Query: 961 PQRENASPAPGTTAEEAMSRGPPPAPEGGSRDEQDGASAETEPWAAAVPPEWVPIIQQDI 1020
PQRENASPAPGTTAEEAMSRGPPPAPEGGSRDEQDGASAETEPWAAAVPPEWVPIIQQDI
Sbjct: 961 PQRENASPAPGTTAEEAMSRGPPPAPEGGSRDEQDGASAETEPWAAAVPPEWVPIIQQDI 1020
Query: 1021 QSQRKVKPQPPLSDAYLSGMPAKRRKTMQGEGPQLLLSEAVSRAAKAAGARPLTSPESLS 1080
QSQRKVKPQPPLSDAYLSGMPAKRRKTMQGEGPQLLLSEAVSRAAKAAGARPLTSPESLS
Sbjct: 1021 QSQRKVKPQPPLSDAYLSGMPAKRRKTMQGEGPQLLLSEAVSRAAKAAGARPLTSPESLS 1080
Query: 1081 RDLEAPEVQESYRQQLRSDIQKRLQEDPNYSPQRFPNAQRAFADDP 1126
RDLEAPEVQESYRQQLRSDIQKRLQEDPNYSPQRFPNAQRAFADDP
Sbjct: 1081 RDLEAPEVQESYRQQLRSDIQKRLQEDPNYSPQRFPNAQRAFADDP 1126
>gi|18375630 HLA-B associated transcript-3 isoform b [Homo sapiens]
Length = 1126
Score = 2271 bits (5886), Expect = 0.0
Identities = 1126/1126 (100%), Positives = 1126/1126 (100%)
Query: 1 MEPNDSTSTAVEEPDSLEVLVKTLDSQTRTFIVGAQMNVKEFKEHIAASVSIPSEKQRLI 60
MEPNDSTSTAVEEPDSLEVLVKTLDSQTRTFIVGAQMNVKEFKEHIAASVSIPSEKQRLI
Sbjct: 1 MEPNDSTSTAVEEPDSLEVLVKTLDSQTRTFIVGAQMNVKEFKEHIAASVSIPSEKQRLI 60
Query: 61 YQGRVLQDDKKLQEYNVGGKVIHLVERAPPQTHLPSGASSGTGSASATHGGGSPPGTRGP 120
YQGRVLQDDKKLQEYNVGGKVIHLVERAPPQTHLPSGASSGTGSASATHGGGSPPGTRGP
Sbjct: 61 YQGRVLQDDKKLQEYNVGGKVIHLVERAPPQTHLPSGASSGTGSASATHGGGSPPGTRGP 120
Query: 121 GASVHDRNANSYVMVGTFNLPSDGSAVDVHINMEQAPIQSEPRVRLVMAQHMIRDIQTLL 180
GASVHDRNANSYVMVGTFNLPSDGSAVDVHINMEQAPIQSEPRVRLVMAQHMIRDIQTLL
Sbjct: 121 GASVHDRNANSYVMVGTFNLPSDGSAVDVHINMEQAPIQSEPRVRLVMAQHMIRDIQTLL 180
Query: 181 SRMECRGGPQPQHSQPPPQPPAVTPEPVALSSQTSEPVESEAPPREPMEAEEVEERAPAQ 240
SRMECRGGPQPQHSQPPPQPPAVTPEPVALSSQTSEPVESEAPPREPMEAEEVEERAPAQ
Sbjct: 181 SRMECRGGPQPQHSQPPPQPPAVTPEPVALSSQTSEPVESEAPPREPMEAEEVEERAPAQ 240
Query: 241 NPELTPGPAPAGPTPAPETNAPNHPSPAEYVEVLQELQRLESRLQPFLQRYYEVLGAAAT 300
NPELTPGPAPAGPTPAPETNAPNHPSPAEYVEVLQELQRLESRLQPFLQRYYEVLGAAAT
Sbjct: 241 NPELTPGPAPAGPTPAPETNAPNHPSPAEYVEVLQELQRLESRLQPFLQRYYEVLGAAAT 300
Query: 301 TDYNNNHEGREEDQRLINLVGESLRLLGNTFVALSDLRCNLACTPPRHLHVVRPMSHYTT 360
TDYNNNHEGREEDQRLINLVGESLRLLGNTFVALSDLRCNLACTPPRHLHVVRPMSHYTT
Sbjct: 301 TDYNNNHEGREEDQRLINLVGESLRLLGNTFVALSDLRCNLACTPPRHLHVVRPMSHYTT 360
Query: 361 PMVLQQAAIPIQINVGTTVTMTGNGTRPPPTPNAEAPPPGPGQASSVAPSSTNVESSAEG 420
PMVLQQAAIPIQINVGTTVTMTGNGTRPPPTPNAEAPPPGPGQASSVAPSSTNVESSAEG
Sbjct: 361 PMVLQQAAIPIQINVGTTVTMTGNGTRPPPTPNAEAPPPGPGQASSVAPSSTNVESSAEG 420
Query: 421 APPPGPAPPPATSHPRVIRISHQSVEPVVMMHMNIQDSGTQPGGVPSAPTGPLGPPGHGQ 480
APPPGPAPPPATSHPRVIRISHQSVEPVVMMHMNIQDSGTQPGGVPSAPTGPLGPPGHGQ
Sbjct: 421 APPPGPAPPPATSHPRVIRISHQSVEPVVMMHMNIQDSGTQPGGVPSAPTGPLGPPGHGQ 480
Query: 481 TLGQQVPGFPTAPTRVVIARPTPPQARPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLVG 540
TLGQQVPGFPTAPTRVVIARPTPPQARPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLVG
Sbjct: 481 TLGQQVPGFPTAPTRVVIARPTPPQARPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLVG 540
Query: 541 QLLMQPVLVAQGTPGMAPPPAPATASASAGTTNTATTAGPAPGGPAQPPPTPQPSMADLQ 600
QLLMQPVLVAQGTPGMAPPPAPATASASAGTTNTATTAGPAPGGPAQPPPTPQPSMADLQ
Sbjct: 541 QLLMQPVLVAQGTPGMAPPPAPATASASAGTTNTATTAGPAPGGPAQPPPTPQPSMADLQ 600
Query: 601 FSQLLGNLLGPAGPGAGGSGVASPTITVAMPGVPAFLQGMTDFLQATQTAPPPPPPPPPP 660
FSQLLGNLLGPAGPGAGGSGVASPTITVAMPGVPAFLQGMTDFLQATQTAPPPPPPPPPP
Sbjct: 601 FSQLLGNLLGPAGPGAGGSGVASPTITVAMPGVPAFLQGMTDFLQATQTAPPPPPPPPPP 660
Query: 661 PPAPEQQTMPPPGSPSGGAGSPGGLGLESLSPEFFTSVVQGVLSSLLGSLGARAGSSESI 720
PPAPEQQTMPPPGSPSGGAGSPGGLGLESLSPEFFTSVVQGVLSSLLGSLGARAGSSESI
Sbjct: 661 PPAPEQQTMPPPGSPSGGAGSPGGLGLESLSPEFFTSVVQGVLSSLLGSLGARAGSSESI 720
Query: 721 AAFIQRLSGSSNIFEPGADGALGFFGALLSLLCQNFSMVDVVMLLHGHFQPLQRLQPQLR 780
AAFIQRLSGSSNIFEPGADGALGFFGALLSLLCQNFSMVDVVMLLHGHFQPLQRLQPQLR
Sbjct: 721 AAFIQRLSGSSNIFEPGADGALGFFGALLSLLCQNFSMVDVVMLLHGHFQPLQRLQPQLR 780
Query: 781 SFFHQHYLGGQEPTPSNIRMATHTLITGLEEYVRESFSLVQVQPGVDIIRTNLEFLQEQF 840
SFFHQHYLGGQEPTPSNIRMATHTLITGLEEYVRESFSLVQVQPGVDIIRTNLEFLQEQF
Sbjct: 781 SFFHQHYLGGQEPTPSNIRMATHTLITGLEEYVRESFSLVQVQPGVDIIRTNLEFLQEQF 840
Query: 841 NSIAAHVLHCTDSGFGARLLELCNQGLFECLALNLHCLGGQQMELAAVINGRIRRMSRGV 900
NSIAAHVLHCTDSGFGARLLELCNQGLFECLALNLHCLGGQQMELAAVINGRIRRMSRGV
Sbjct: 841 NSIAAHVLHCTDSGFGARLLELCNQGLFECLALNLHCLGGQQMELAAVINGRIRRMSRGV 900
Query: 901 NPSLVSWLTTMMGLRLQVVLEHMPVGPDAILRYVRRVGDPPQPLPEEPMEVQGAERASPE 960
NPSLVSWLTTMMGLRLQVVLEHMPVGPDAILRYVRRVGDPPQPLPEEPMEVQGAERASPE
Sbjct: 901 NPSLVSWLTTMMGLRLQVVLEHMPVGPDAILRYVRRVGDPPQPLPEEPMEVQGAERASPE 960
Query: 961 PQRENASPAPGTTAEEAMSRGPPPAPEGGSRDEQDGASAETEPWAAAVPPEWVPIIQQDI 1020
PQRENASPAPGTTAEEAMSRGPPPAPEGGSRDEQDGASAETEPWAAAVPPEWVPIIQQDI
Sbjct: 961 PQRENASPAPGTTAEEAMSRGPPPAPEGGSRDEQDGASAETEPWAAAVPPEWVPIIQQDI 1020
Query: 1021 QSQRKVKPQPPLSDAYLSGMPAKRRKTMQGEGPQLLLSEAVSRAAKAAGARPLTSPESLS 1080
QSQRKVKPQPPLSDAYLSGMPAKRRKTMQGEGPQLLLSEAVSRAAKAAGARPLTSPESLS
Sbjct: 1021 QSQRKVKPQPPLSDAYLSGMPAKRRKTMQGEGPQLLLSEAVSRAAKAAGARPLTSPESLS 1080
Query: 1081 RDLEAPEVQESYRQQLRSDIQKRLQEDPNYSPQRFPNAQRAFADDP 1126
RDLEAPEVQESYRQQLRSDIQKRLQEDPNYSPQRFPNAQRAFADDP
Sbjct: 1081 RDLEAPEVQESYRQQLRSDIQKRLQEDPNYSPQRFPNAQRAFADDP 1126
>gi|149158692 HLA-B associated transcript-3 isoform a [Homo sapiens]
Length = 1132
Score = 2265 bits (5869), Expect = 0.0
Identities = 1126/1132 (99%), Positives = 1126/1132 (99%), Gaps = 6/1132 (0%)
Query: 1 MEPNDSTSTAVEEPDSLEVLVKTLDSQTRTFIVGAQMNVKEFKEHIAASVSIPSEKQRLI 60
MEPNDSTSTAVEEPDSLEVLVKTLDSQTRTFIVGAQMNVKEFKEHIAASVSIPSEKQRLI
Sbjct: 1 MEPNDSTSTAVEEPDSLEVLVKTLDSQTRTFIVGAQMNVKEFKEHIAASVSIPSEKQRLI 60
Query: 61 YQGRVLQDDKKLQEYNVGGKVIHLVERAPPQTHLPSGASSGTGSASATHGGGSPPGTRGP 120
YQGRVLQDDKKLQEYNVGGKVIHLVERAPPQTHLPSGASSGTGSASATHGGGSPPGTRGP
Sbjct: 61 YQGRVLQDDKKLQEYNVGGKVIHLVERAPPQTHLPSGASSGTGSASATHGGGSPPGTRGP 120
Query: 121 GASVHDRNANSYVMVGTFNLPSDGSAVDVHINMEQAPIQSEPRVRLVMAQHMIRDIQTLL 180
GASVHDRNANSYVMVGTFNLPSDGSAVDVHINMEQAPIQSEPRVRLVMAQHMIRDIQTLL
Sbjct: 121 GASVHDRNANSYVMVGTFNLPSDGSAVDVHINMEQAPIQSEPRVRLVMAQHMIRDIQTLL 180
Query: 181 SRME------CRGGPQPQHSQPPPQPPAVTPEPVALSSQTSEPVESEAPPREPMEAEEVE 234
SRME CRGGPQPQHSQPPPQPPAVTPEPVALSSQTSEPVESEAPPREPMEAEEVE
Sbjct: 181 SRMETLPYLQCRGGPQPQHSQPPPQPPAVTPEPVALSSQTSEPVESEAPPREPMEAEEVE 240
Query: 235 ERAPAQNPELTPGPAPAGPTPAPETNAPNHPSPAEYVEVLQELQRLESRLQPFLQRYYEV 294
ERAPAQNPELTPGPAPAGPTPAPETNAPNHPSPAEYVEVLQELQRLESRLQPFLQRYYEV
Sbjct: 241 ERAPAQNPELTPGPAPAGPTPAPETNAPNHPSPAEYVEVLQELQRLESRLQPFLQRYYEV 300
Query: 295 LGAAATTDYNNNHEGREEDQRLINLVGESLRLLGNTFVALSDLRCNLACTPPRHLHVVRP 354
LGAAATTDYNNNHEGREEDQRLINLVGESLRLLGNTFVALSDLRCNLACTPPRHLHVVRP
Sbjct: 301 LGAAATTDYNNNHEGREEDQRLINLVGESLRLLGNTFVALSDLRCNLACTPPRHLHVVRP 360
Query: 355 MSHYTTPMVLQQAAIPIQINVGTTVTMTGNGTRPPPTPNAEAPPPGPGQASSVAPSSTNV 414
MSHYTTPMVLQQAAIPIQINVGTTVTMTGNGTRPPPTPNAEAPPPGPGQASSVAPSSTNV
Sbjct: 361 MSHYTTPMVLQQAAIPIQINVGTTVTMTGNGTRPPPTPNAEAPPPGPGQASSVAPSSTNV 420
Query: 415 ESSAEGAPPPGPAPPPATSHPRVIRISHQSVEPVVMMHMNIQDSGTQPGGVPSAPTGPLG 474
ESSAEGAPPPGPAPPPATSHPRVIRISHQSVEPVVMMHMNIQDSGTQPGGVPSAPTGPLG
Sbjct: 421 ESSAEGAPPPGPAPPPATSHPRVIRISHQSVEPVVMMHMNIQDSGTQPGGVPSAPTGPLG 480
Query: 475 PPGHGQTLGQQVPGFPTAPTRVVIARPTPPQARPSHPGGPPVSGTLQGAGLGTNASLAQM 534
PPGHGQTLGQQVPGFPTAPTRVVIARPTPPQARPSHPGGPPVSGTLQGAGLGTNASLAQM
Sbjct: 481 PPGHGQTLGQQVPGFPTAPTRVVIARPTPPQARPSHPGGPPVSGTLQGAGLGTNASLAQM 540
Query: 535 VSGLVGQLLMQPVLVAQGTPGMAPPPAPATASASAGTTNTATTAGPAPGGPAQPPPTPQP 594
VSGLVGQLLMQPVLVAQGTPGMAPPPAPATASASAGTTNTATTAGPAPGGPAQPPPTPQP
Sbjct: 541 VSGLVGQLLMQPVLVAQGTPGMAPPPAPATASASAGTTNTATTAGPAPGGPAQPPPTPQP 600
Query: 595 SMADLQFSQLLGNLLGPAGPGAGGSGVASPTITVAMPGVPAFLQGMTDFLQATQTAPPPP 654
SMADLQFSQLLGNLLGPAGPGAGGSGVASPTITVAMPGVPAFLQGMTDFLQATQTAPPPP
Sbjct: 601 SMADLQFSQLLGNLLGPAGPGAGGSGVASPTITVAMPGVPAFLQGMTDFLQATQTAPPPP 660
Query: 655 PPPPPPPPAPEQQTMPPPGSPSGGAGSPGGLGLESLSPEFFTSVVQGVLSSLLGSLGARA 714
PPPPPPPPAPEQQTMPPPGSPSGGAGSPGGLGLESLSPEFFTSVVQGVLSSLLGSLGARA
Sbjct: 661 PPPPPPPPAPEQQTMPPPGSPSGGAGSPGGLGLESLSPEFFTSVVQGVLSSLLGSLGARA 720
Query: 715 GSSESIAAFIQRLSGSSNIFEPGADGALGFFGALLSLLCQNFSMVDVVMLLHGHFQPLQR 774
GSSESIAAFIQRLSGSSNIFEPGADGALGFFGALLSLLCQNFSMVDVVMLLHGHFQPLQR
Sbjct: 721 GSSESIAAFIQRLSGSSNIFEPGADGALGFFGALLSLLCQNFSMVDVVMLLHGHFQPLQR 780
Query: 775 LQPQLRSFFHQHYLGGQEPTPSNIRMATHTLITGLEEYVRESFSLVQVQPGVDIIRTNLE 834
LQPQLRSFFHQHYLGGQEPTPSNIRMATHTLITGLEEYVRESFSLVQVQPGVDIIRTNLE
Sbjct: 781 LQPQLRSFFHQHYLGGQEPTPSNIRMATHTLITGLEEYVRESFSLVQVQPGVDIIRTNLE 840
Query: 835 FLQEQFNSIAAHVLHCTDSGFGARLLELCNQGLFECLALNLHCLGGQQMELAAVINGRIR 894
FLQEQFNSIAAHVLHCTDSGFGARLLELCNQGLFECLALNLHCLGGQQMELAAVINGRIR
Sbjct: 841 FLQEQFNSIAAHVLHCTDSGFGARLLELCNQGLFECLALNLHCLGGQQMELAAVINGRIR 900
Query: 895 RMSRGVNPSLVSWLTTMMGLRLQVVLEHMPVGPDAILRYVRRVGDPPQPLPEEPMEVQGA 954
RMSRGVNPSLVSWLTTMMGLRLQVVLEHMPVGPDAILRYVRRVGDPPQPLPEEPMEVQGA
Sbjct: 901 RMSRGVNPSLVSWLTTMMGLRLQVVLEHMPVGPDAILRYVRRVGDPPQPLPEEPMEVQGA 960
Query: 955 ERASPEPQRENASPAPGTTAEEAMSRGPPPAPEGGSRDEQDGASAETEPWAAAVPPEWVP 1014
ERASPEPQRENASPAPGTTAEEAMSRGPPPAPEGGSRDEQDGASAETEPWAAAVPPEWVP
Sbjct: 961 ERASPEPQRENASPAPGTTAEEAMSRGPPPAPEGGSRDEQDGASAETEPWAAAVPPEWVP 1020
Query: 1015 IIQQDIQSQRKVKPQPPLSDAYLSGMPAKRRKTMQGEGPQLLLSEAVSRAAKAAGARPLT 1074
IIQQDIQSQRKVKPQPPLSDAYLSGMPAKRRKTMQGEGPQLLLSEAVSRAAKAAGARPLT
Sbjct: 1021 IIQQDIQSQRKVKPQPPLSDAYLSGMPAKRRKTMQGEGPQLLLSEAVSRAAKAAGARPLT 1080
Query: 1075 SPESLSRDLEAPEVQESYRQQLRSDIQKRLQEDPNYSPQRFPNAQRAFADDP 1126
SPESLSRDLEAPEVQESYRQQLRSDIQKRLQEDPNYSPQRFPNAQRAFADDP
Sbjct: 1081 SPESLSRDLEAPEVQESYRQQLRSDIQKRLQEDPNYSPQRFPNAQRAFADDP 1132
>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
Length = 416
Score = 86.3 bits (212), Expect = 2e-16
Identities = 97/326 (29%), Positives = 107/326 (32%), Gaps = 34/326 (10%)
Query: 383 GNGTRPPPTPN--AEAPPPGPGQASSVAPSSTNVESSAEGAPPPGP--APPPATSHPRVI 438
G PPP + PPP PG+ P N +G PPPG PPP R
Sbjct: 55 GKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGN---KPQGPPPPGKPQGPPPQGDKSRSP 111
Query: 439 RISHQSVEPVVMMHMNIQDSGTQPGGVPSAPTGPLGPPGHG--QTLGQQVPGFPTAPTRV 496
R P G QP G P P P GPP G + G PG P P
Sbjct: 112 R------SPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQ 165
Query: 497 VIARPTPPQARPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLVGQLLMQPVLVAQGTPGM 556
+ ++ P P GPP G Q G Q G P G P
Sbjct: 166 GDNKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPP--PPGKP-Q 222
Query: 557 APPPAPATASASAGTTNTATTAGPAPGGPAQPP-PTPQPSMADLQFSQLLGNLLGPAGPG 615
PPP S SA + GP P G QP P P P Q GP PG
Sbjct: 223 GPPPQGDNKSQSARSP-PGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPG 281
Query: 616 A-------GGSGVASPTITVAMPGVPAFLQGMTDFLQATQTAPPPPPPPPPPPP--APEQ 666
GGS S P P G Q PPPP P PPP +
Sbjct: 282 KPQGPPPQGGSKSRSSRSPPGKPQGPPPQGG-----NQPQGPPPPPGKPQGPPPQGGNKP 336
Query: 667 QTMPPPGSPSGGAGSPGGLGLESLSP 692
Q PPPG P G G + SP
Sbjct: 337 QGPPPPGKPQGPPPQGGSKSRSARSP 362
Score = 84.3 bits (207), Expect = 6e-16
Identities = 95/324 (29%), Positives = 109/324 (33%), Gaps = 36/324 (11%)
Query: 383 GNGTRPPPTPN--AEAPPPGPGQASSVAPSSTNVESSAEGAPPPG-PAPPPATSHPRVIR 439
G PPP + PPP PG+ P N +G PPPG P PP P+
Sbjct: 116 GKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGN---KPQGPPPPGKPQGPP----PQGDN 168
Query: 440 ISHQSVEPVVMMHMNIQDSGTQPGGVPSAPTGPLGPPGHG--QTLGQQVPGFPTAPTRVV 497
S S P G QP G P P P GPP G + G PG P P
Sbjct: 169 KSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQG 228
Query: 498 IARPTPPQARPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLVGQLLMQPVLVAQGTPGMA 557
+ ++ P P GPP G Q G Q G P G P
Sbjct: 229 DNKSQSARSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPP--PPGKP-QG 285
Query: 558 PPPAPATASASAGTTNTATTAGPAPGGPAQPP-PTPQPSMADLQFSQLLGNLLGPAGPGA 616
PPP + S S+ + GP P G QP P P P Q GP PG
Sbjct: 286 PPPQGGSKSRSSRSP-PGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGK 344
Query: 617 -------GGSGVASPTITVAMPGVPAFLQGMTDFLQATQTAPPPPPPPPPPPPAPEQQTM 669
GGS S P P +G P PPPP P+Q
Sbjct: 345 PQGPPPQGGSKSRSARSPPGKPQGPPQQEGNN-----------PQGPPPPAGGNPQQPQA 393
Query: 670 PPPGSPSGGAGSPGGLGLESLSPE 693
PP G P G P G G S P+
Sbjct: 394 PPAGQPQGPPRPPQG-GRPSRPPQ 416
Score = 37.4 bits (85), Expect = 0.081
Identities = 26/85 (30%), Positives = 31/85 (36%), Gaps = 5/85 (5%)
Query: 186 RGGPQPQHSQPPPQPPAVTPEPVALSSQTSEPVESEAPPREPMEAEEVEERAPAQNPELT 245
+GG QPQ PPP P P Q P P + + R+P P+
Sbjct: 124 QGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSRSSRSPPGKPQGP 183
Query: 246 P---GPAPAGPTPAPETNAPNHPSP 267
P G P GP P P P P P
Sbjct: 184 PPQGGNQPQGPPPPP--GKPQGPPP 206
Score = 37.4 bits (85), Expect = 0.081
Identities = 26/85 (30%), Positives = 31/85 (36%), Gaps = 5/85 (5%)
Query: 186 RGGPQPQHSQPPPQPPAVTPEPVALSSQTSEPVESEAPPREPMEAEEVEERAPAQNPELT 245
+GG QPQ PPP P P Q P P + + R+P P+
Sbjct: 186 QGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSQSARSPPGKPQGP 245
Query: 246 P---GPAPAGPTPAPETNAPNHPSP 267
P G P GP P P P P P
Sbjct: 246 PPQGGNQPQGPPPPP--GKPQGPPP 268
Score = 37.0 bits (84), Expect = 0.11
Identities = 26/85 (30%), Positives = 31/85 (36%), Gaps = 5/85 (5%)
Query: 186 RGGPQPQHSQPPPQPPAVTPEPVALSSQTSEPVESEAPPREPMEAEEVEERAPAQNPELT 245
+GG QPQ PPP P P Q P P ++ R+P P+
Sbjct: 248 QGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSSRSPPGKPQGP 307
Query: 246 P---GPAPAGPTPAPETNAPNHPSP 267
P G P GP P P P P P
Sbjct: 308 PPQGGNQPQGPPPPP--GKPQGPPP 330
Score = 36.2 bits (82), Expect = 0.18
Identities = 24/85 (28%), Positives = 33/85 (38%), Gaps = 7/85 (8%)
Query: 186 RGGPQPQHSQPPPQPPAVTPEPVALSSQTSEPVESEAPPREPMEAEEVEERAPAQNPELT 245
+GG +PQ PP +P P+ S S P + + PP + + + P P
Sbjct: 84 QGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGN----QPQGPPPPPGKP 139
Query: 246 PGPAPAG---PTPAPETNAPNHPSP 267
GP P G P P P P P
Sbjct: 140 QGPPPQGGNKPQGPPPPGKPQGPPP 164
Score = 35.0 bits (79), Expect = 0.40
Identities = 41/150 (27%), Positives = 56/150 (37%), Gaps = 25/150 (16%)
Query: 938 GDPPQP-LPEEPMEVQGAERASPEPQRENASPAPGTTAEEAMSRGPPPAPEGGSRDEQDG 996
G PP P P+ P G + P P + P P ++ SR PP P+G Q G
Sbjct: 255 GPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSSRSPPGKPQG--PPPQGG 312
Query: 997 ASAETEPWAAAVPPEWVPIIQQDIQSQRKVKPQPPLSDAYLSGMPAKRRKTMQGEGPQLL 1056
+ P PP P Q Q KPQ P G P QG PQ
Sbjct: 313 NQPQGPP-----PPPGKP---QGPPPQGGNKPQGPPP----PGKP-------QGPPPQ-- 351
Query: 1057 LSEAVSRAAKAAGARPLTSPESLSRDLEAP 1086
+ SR+A++ +P P+ + + P
Sbjct: 352 -GGSKSRSARSPPGKPQGPPQQEGNNPQGP 380
Score = 34.7 bits (78), Expect = 0.52
Identities = 25/86 (29%), Positives = 35/86 (40%), Gaps = 8/86 (9%)
Query: 186 RGGPQPQHSQPPPQPPAVTPEPVALS-SQTSEPVESEAPPREPMEAEEVEERAPAQNPEL 244
+GG +PQ PP +P P+ + S S S P + + PP + + + P P
Sbjct: 269 QGGNKPQGPPPPGKPQGPPPQGGSKSRSSRSPPGKPQGPPPQGGN----QPQGPPPPPGK 324
Query: 245 TPGPAPAG---PTPAPETNAPNHPSP 267
GP P G P P P P P
Sbjct: 325 PQGPPPQGGNKPQGPPPPGKPQGPPP 350
Score = 34.7 bits (78), Expect = 0.52
Identities = 26/105 (24%), Positives = 34/105 (32%), Gaps = 25/105 (23%)
Query: 186 RGGPQPQHSQPPPQPPAVTPEPVALSSQTSEPV---------------ESEAPPREPMEA 230
+GG QPQ PPP P P Q P + +PP +P
Sbjct: 310 QGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSARSPPGKPQGP 369
Query: 231 EEVEERAP----------AQNPELTPGPAPAGPTPAPETNAPNHP 265
+ E P Q P+ P P GP P+ P+ P
Sbjct: 370 PQQEGNNPQGPPPPAGGNPQQPQAPPAGQPQGPPRPPQGGRPSRP 414
Score = 33.9 bits (76), Expect = 0.89
Identities = 26/95 (27%), Positives = 40/95 (42%), Gaps = 6/95 (6%)
Query: 938 GDPPQP-LPEEPMEVQGAERASPEPQRENASPAPGTTAEEAMSRGPPPAPEGGSRDEQDG 996
G PP P P+ P G + P P + P P ++ +R PP P+G +Q+G
Sbjct: 317 GPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSARSPPGKPQG--PPQQEG 374
Query: 997 ASAETEPWAAAVPPEWVPIIQQDIQSQRKVKPQPP 1031
+ + P A P+ Q Q + P+PP
Sbjct: 375 NNPQGPPPPAGGNPQQP---QAPPAGQPQGPPRPP 406
Score = 33.5 bits (75), Expect = 1.2
Identities = 25/86 (29%), Positives = 34/86 (39%), Gaps = 8/86 (9%)
Query: 186 RGGPQPQHSQPPPQPPAVTPEPVALS-SQTSEPVESEAPPREPMEAEEVEERAPAQNPEL 244
+GG +PQ PP +P P+ S S S P + + PP + + + P P
Sbjct: 145 QGGNKPQGPPPPGKPQGPPPQGDNKSRSSRSPPGKPQGPPPQGGN----QPQGPPPPPGK 200
Query: 245 TPGPAPAG---PTPAPETNAPNHPSP 267
GP P G P P P P P
Sbjct: 201 PQGPPPQGGNKPQGPPPPGKPQGPPP 226
Score = 33.1 bits (74), Expect = 1.5
Identities = 25/86 (29%), Positives = 34/86 (39%), Gaps = 8/86 (9%)
Query: 186 RGGPQPQHSQPPPQPPAVTPEPVALS-SQTSEPVESEAPPREPMEAEEVEERAPAQNPEL 244
+GG +PQ PP +P P+ S S S P + + PP + + + P P
Sbjct: 207 QGGNKPQGPPPPGKPQGPPPQGDNKSQSARSPPGKPQGPPPQGGN----QPQGPPPPPGK 262
Query: 245 TPGPAPAG---PTPAPETNAPNHPSP 267
GP P G P P P P P
Sbjct: 263 PQGPPPQGGNKPQGPPPPGKPQGPPP 288
Score = 33.1 bits (74), Expect = 1.5
Identities = 23/80 (28%), Positives = 32/80 (40%), Gaps = 3/80 (3%)
Query: 188 GPQPQHSQPPPQPPAVTPEPVALSSQTSEPVESEAPPREPMEAEEVEERAPAQNPELTPG 247
GP PQ P PP +P Q + PP +P + + + +++ PG
Sbjct: 306 GPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKP-QGPPPQGGSKSRSARSPPG 364
Query: 248 PAPAGPTPAPETNAPNHPSP 267
P GP P E N P P P
Sbjct: 365 -KPQGP-PQQEGNNPQGPPP 382
Score = 31.6 bits (70), Expect = 4.4
Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 6/62 (9%)
Query: 938 GDPPQP-LPEEPMEVQGAERASPEPQRENASPAPGTTAEEAMSRGPP-----PAPEGGSR 991
G PP P P+ P G + P P + P P + SR PP P P+GG++
Sbjct: 131 GPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSRSSRSPPGKPQGPPPQGGNQ 190
Query: 992 DE 993
+
Sbjct: 191 PQ 192
Score = 31.2 bits (69), Expect = 5.8
Identities = 28/106 (26%), Positives = 37/106 (34%), Gaps = 11/106 (10%)
Query: 166 LVMAQHMIRDIQTLLSRMECRGGPQ---PQHSQPPPQPPAVTPEPVALSSQ-TSEPVESE 221
L AQ++ D+ S G PQ PQ P PP+ +P Q ++P
Sbjct: 13 LSSAQNLNEDVSQEESPSLIAGNPQGAPPQGGNKPQGPPSPPGKPQGPPPQGGNQPQGPP 72
Query: 222 APPREPMEAEEVEERAPAQNPELTPGPAPAGPTPAPETNAPNHPSP 267
PP +P + P Q GP P G P SP
Sbjct: 73 PPPGKP-------QGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSP 111
Score = 30.4 bits (67), Expect = 9.9
Identities = 27/103 (26%), Positives = 35/103 (33%), Gaps = 21/103 (20%)
Query: 186 RGGPQPQH--------SQPPPQ-------PPAVTPEPVALSSQTSEPVESEAPPREPM-- 228
+GG +PQ PPPQ PP +P Q + PP +P
Sbjct: 42 QGGNKPQGPPSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGP 101
Query: 229 EAEEVEERAPAQNPELTPGPAPAGPT----PAPETNAPNHPSP 267
+ + R+P P GP P G P P P P P
Sbjct: 102 PPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPP 144
Score = 30.4 bits (67), Expect = 9.9
Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 6/62 (9%)
Query: 938 GDPPQP-LPEEPMEVQGAERASPEPQRENASPAPGTTAEEAMSRGPP-----PAPEGGSR 991
G PP P P+ P G + P P + P P + +R PP P P+GG++
Sbjct: 193 GPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSQSARSPPGKPQGPPPQGGNQ 252
Query: 992 DE 993
+
Sbjct: 253 PQ 254
>gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1
preproprotein [Homo sapiens]
Length = 331
Score = 84.3 bits (207), Expect = 6e-16
Identities = 91/328 (27%), Positives = 109/328 (33%), Gaps = 43/328 (13%)
Query: 381 MTGNGTRPPPTPN--AEAPPPGPGQASSVAPSSTNVESSAEGAPPPGP--APPPATSHPR 436
+ GN P P + PPP PG+ P N +G PPPG PPP R
Sbjct: 32 IAGNPQGPSPQGGNKPQGPPPPPGKPQGPPPQGGN---KPQGPPPPGKPQGPPPQGDKSR 88
Query: 437 VIRISHQSVEPVVMMHMNIQDSGTQPGGVPSAPTGPLGPPGHG--QTLGQQVPGFPTAPT 494
R P G QP G P P P GPP G + G PG P P
Sbjct: 89 SPR------SPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNRPQGPPPPGKPQGPP 142
Query: 495 RVVIARPTPPQARPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLVGQLLMQPVLVAQGTP 554
+ P++ P P GPP G Q G Q G+ P P
Sbjct: 143 PQG-DKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGKKPQGPP-----PP 196
Query: 555 GMAPPPAPATASASAGTTNTATTAGPAPGGPAQPPPTPQPSMADLQFSQLLGNLLGPAGP 614
G P P + + + GP P G QP P P G GP P
Sbjct: 197 GKPQGPPPQGDKSRSSQSPPGKPQGPPPQGGNQPQGPPPPP----------GKPQGP--P 244
Query: 615 GAGGSGVASPTITVAMPGVPAFLQGMTDFLQATQTAPPPPP---------PPPPPPPAPE 665
GG+ P G PA + ++ P PP PPPP P+
Sbjct: 245 PQGGNKPQGPPPPGKPQGPPAQGGSKSQSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQ 304
Query: 666 QQTMPPPGSPSGGAGSPGGLGLESLSPE 693
Q PP G P G P G G S P+
Sbjct: 305 QPQAPPAGQPQGPPRPPQG-GRPSRPPQ 331
Score = 37.0 bits (84), Expect = 0.11
Identities = 24/86 (27%), Positives = 30/86 (34%), Gaps = 6/86 (6%)
Query: 188 GPQPQHSQPPPQPPAVTPEPVALSSQTSEPVESEAPPREPM--EAEEVEERAPAQNPELT 245
GP PQ P PP +P Q + PP +P + + R+P P
Sbjct: 38 GPSPQGGNKPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKP 97
Query: 246 PGPAPAGPT----PAPETNAPNHPSP 267
GP P G P P P P P
Sbjct: 98 QGPPPQGGNQPQGPPPPPGKPQGPPP 123
Score = 36.2 bits (82), Expect = 0.18
Identities = 24/85 (28%), Positives = 33/85 (38%), Gaps = 7/85 (8%)
Query: 186 RGGPQPQHSQPPPQPPAVTPEPVALSSQTSEPVESEAPPREPMEAEEVEERAPAQNPELT 245
+GG +PQ PP +P P+ S S P + + PP + + + P P
Sbjct: 63 QGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGN----QPQGPPPPPGKP 118
Query: 246 PGPAPAG---PTPAPETNAPNHPSP 267
GP P G P P P P P
Sbjct: 119 QGPPPQGGNRPQGPPPPGKPQGPPP 143
Score = 36.2 bits (82), Expect = 0.18
Identities = 24/85 (28%), Positives = 33/85 (38%), Gaps = 7/85 (8%)
Query: 186 RGGPQPQHSQPPPQPPAVTPEPVALSSQTSEPVESEAPPREPMEAEEVEERAPAQNPELT 245
+GG +PQ PP +P P+ S S P + + PP + + + P P
Sbjct: 124 QGGNRPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGN----QPQGPPPPPGKP 179
Query: 246 PGPAPAG---PTPAPETNAPNHPSP 267
GP P G P P P P P
Sbjct: 180 QGPPPQGGKKPQGPPPPGKPQGPPP 204
Score = 36.2 bits (82), Expect = 0.18
Identities = 27/86 (31%), Positives = 34/86 (39%), Gaps = 8/86 (9%)
Query: 186 RGGPQPQHSQPPPQPPAVTPEPVALSSQ-TSEPVESEAPPREPMEAEEVEERAPAQNPEL 244
+GG QPQ PPP P P Q P + + PP P + ++P P+
Sbjct: 164 QGGNQPQGPPPPPGKPQGPPPQGGKKPQGPPPPGKPQGPP--PQGDKSRSSQSPPGKPQG 221
Query: 245 TP---GPAPAGPTPAPETNAPNHPSP 267
P G P GP P P P P P
Sbjct: 222 PPPQGGNQPQGPPPPP--GKPQGPPP 245
Score = 35.4 bits (80), Expect = 0.31
Identities = 24/80 (30%), Positives = 32/80 (40%), Gaps = 3/80 (3%)
Query: 188 GPQPQHSQPPPQPPAVTPEPVALSSQTSEPVESEAPPREPMEAEEVEERAPAQNPELTPG 247
GP PQ P PP +P Q + PP +P + + + +Q+ PG
Sbjct: 221 GPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKP-QGPPAQGGSKSQSARSPPG 279
Query: 248 PAPAGPTPAPETNAPNHPSP 267
P GP P E N P P P
Sbjct: 280 -KPQGP-PQQEGNNPQGPPP 297
Score = 35.4 bits (80), Expect = 0.31
Identities = 28/107 (26%), Positives = 35/107 (32%), Gaps = 29/107 (27%)
Query: 186 RGGPQPQHSQPP-----------------PQPPAVTPEPVALSSQTSEPVESEAPPREPM 228
+GG QPQ PP P PP P A S+ S PP +P
Sbjct: 225 QGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPAQGGSKSQSARS--PPGKPQ 282
Query: 229 EAEEVEERAP----------AQNPELTPGPAPAGPTPAPETNAPNHP 265
+ E P Q P+ P P GP P+ P+ P
Sbjct: 283 GPPQQEGNNPQGPPPPAGGNPQQPQAPPAGQPQGPPRPPQGGRPSRP 329
Score = 35.0 bits (79), Expect = 0.40
Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 8/87 (9%)
Query: 186 RGGPQPQHSQPPPQPPAVTPEPVALSSQTSEPVESEAPPREPMEAEEVEERAPAQNPELT 245
+GG +PQ PP +P P+ S S P + + PP + + + P P
Sbjct: 185 QGGKKPQGPPPPGKPQGPPPQGDKSRSSQSPPGKPQGPPPQGGN----QPQGPPPPPGKP 240
Query: 246 PGPAPAG---PTPAPETNAPNHPSPAE 269
GP P G P P P P PA+
Sbjct: 241 QGPPPQGGNKPQGPPPPGKPQGP-PAQ 266
Score = 31.6 bits (70), Expect = 4.4
Identities = 26/96 (27%), Positives = 41/96 (42%), Gaps = 8/96 (8%)
Query: 938 GDPPQPLPEEPMEVQGAERAS--PEPQRENASPAPGTTAEEAMSRGPPPAPEGGSRDEQD 995
G PP P + QG + P P + PA G + ++ +R PP P+G +Q+
Sbjct: 232 GPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPAQGGSKSQS-ARSPPGKPQG--PPQQE 288
Query: 996 GASAETEPWAAAVPPEWVPIIQQDIQSQRKVKPQPP 1031
G + + P A P+ Q Q + P+PP
Sbjct: 289 GNNPQGPPPPAGGNPQQP---QAPPAGQPQGPPRPP 321
Score = 30.4 bits (67), Expect = 9.9
Identities = 32/118 (27%), Positives = 40/118 (33%), Gaps = 14/118 (11%)
Query: 938 GDPPQPLPEEPMEVQGAERAS--PEPQRENASPAPGTTAEEAMSRGPPPAPEGGSRDEQD 995
G PP P + QG R P P + P G + R PP P+G Q
Sbjct: 110 GPPPPPGKPQGPPPQGGNRPQGPPPPGKPQGPPPQGDKSRSP--RSPPGKPQG--PPPQG 165
Query: 996 GASAETEPWAAAVPPEWVPIIQQDIQSQRKVKPQPPLSDAYLSGMPAKRRKTMQGEGP 1053
G + P PP P Q Q KPQ P G P + K+ + P
Sbjct: 166 GNQPQGPP-----PPPGKP---QGPPPQGGKKPQGPPPPGKPQGPPPQGDKSRSSQSP 215
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 84.3 bits (207), Expect = 6e-16
Identities = 103/370 (27%), Positives = 130/370 (35%), Gaps = 44/370 (11%)
Query: 342 ACTPPRHLHVVRPMSHYTTPMVLQQAAIPIQINVGTTVTMTGNGTR--PPPTPNAEAPPP 399
A TPP V P S +P AA P T T + P TP + P
Sbjct: 1008 APTPP----AVTPPSPKGSP-----AATPFPKGASTPPAATPPSPKGSPAATPLPKGAPT 1058
Query: 400 GPGQASSVAPSSTNVESSAEGAP------PPGPAPPPATSHPRVIRISHQSVEPVVMMHM 453
P A+ +P S +GAP PP P PAT P+ + + P +
Sbjct: 1059 TPA-ATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATPPSPKGGL 1117
Query: 454 NI---QDSGTQPGGVPSAPTGPLG--PPGHGQTLGQQVP-----GFPTAPTRVVIARPTP 503
+ + T P P +P G L PP T P G T P + PT
Sbjct: 1118 ATPPHKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPPPK---GAPTT 1174
Query: 504 PQARPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLVGQLLMQPVLVAQGTPGMAPPPAP- 562
P A P P G + + +GA A+ GL P T A PP+P
Sbjct: 1175 PAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLA-----TPSPKGAPTTPAATPPSPK 1229
Query: 563 ---ATASASAGTTNTATTAGPAPGGPAQPPPTPQPSMADLQFSQLLGNLLGPAGPGAGGS 619
AT S T A T GGPA PPP P+ L G L P GA
Sbjct: 1230 GGLATPSPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNP 1289
Query: 620 GVASPTITVAMPGVPAFLQGMTDFLQATQTAPPPPPPPPPPPPAPEQQTMPPP---GSPS 676
V +P P +G AT +P P PPP AP + PP G+P+
Sbjct: 1290 AVVTPPSPKGGPATSP-PKGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPT 1348
Query: 677 GGAGSPGGLG 686
A +P G
Sbjct: 1349 LPATTPSSKG 1358
Score = 80.9 bits (198), Expect = 6e-15
Identities = 155/661 (23%), Positives = 233/661 (35%), Gaps = 99/661 (14%)
Query: 89 PPQTHLPSGASSGTGSASATHGGGSPPGTRGPGASVHDRNANSYVMVGTFN-LPSDGSAV 147
P ++ P+G + T ++T+ + P G +V N V GT LP +A
Sbjct: 649 PLESADPAGVAPTTAKGTSTYTTTASPFLEG---TVSLAPKNHPVKEGTLTTLPLVPTA- 704
Query: 148 DVHINMEQAPIQSEPRVRLVMAQHMIRDIQTLLSRMECRGGPQPQHSQPPPQPPAVTP-- 205
E P+ P Q+ + TL+ E P+ P PPA TP
Sbjct: 705 -----SENCPVAPSP-------QNTCAPLATLVLAPEI-----PKSVPSPSLPPAGTPPG 747
Query: 206 -EPVALSSQTSEPVESEAPPRE-PMEAEEVEERAPAQNP--ELTPGPAPAGPTPAPETNA 261
+ V S TS + P+E P E A ++ L P+P G + +P+T
Sbjct: 748 TKKVDGISHTSALAPVASSPKECPTEDSGASATASSKGTLTYLADSPSPLGVSVSPQTKR 807
Query: 262 PNHPSPAEYVEVLQELQRLESRLQPFLQRYYEVLGAAATTDYNNNHEGREEDQRLINLVG 321
P P+ + L S + P + A+ + + + +G ++ +
Sbjct: 808 P--PTKKGSAGPDTPIGNLSSPVSP--------VEASFLPENSLSFQGSKDSPATTHSPT 857
Query: 322 ESLRLLGNTFVALSDLRCNLACTPPRH------LHVVRPMSHYTTPMVLQQAAIPIQINV 375
T A++ L PP+ +++ P TP Q A+ + +
Sbjct: 858 PPSPKGAPTPSAVTPLSPKGVTLPPKETPTPSVVNLPFPKEGPATPAPKQAPALSMTSSS 917
Query: 376 GTTVTMT--------GNGTRPPPTPNAEAPP--------------PGPGQASSVAPSSTN 413
T + PTP A PP P P A+ +P
Sbjct: 918 PKKARATPAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGP 977
Query: 414 VESSAEGAPPPGPAPP------PATSHPRVI----RISHQSVEPVVMMHMNIQDSGTQPG 463
S +GAP P A P PAT P+ ++ S + + + T P
Sbjct: 978 ATPSPKGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPA 1037
Query: 464 GVPSAPTG-----PLGPPGHGQTLGQQVP---GFPTAPTRVVIARPTPPQARPSHPGGPP 515
P +P G PL P G T +P G P P+ + PTPP A P P G P
Sbjct: 1038 ATPPSPKGSPAATPL-PKGAPTTPAATLPSPKGGPATPS--LKGAPTPPAATPPSPKGGP 1094
Query: 516 VSGTLQGAGLGTNASLAQMVSGLVGQLLMQPVLVAQGTP-----GMAPPP---APATASA 567
+ + +GA + A+ GL TP G+A PP AP T +A
Sbjct: 1095 ATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAATPPSPKGGLATPPPKGAPTTPAA 1154
Query: 568 SAGTTNTATTAGPAPGGPAQPPPTPQPSMADLQFSQLLGNLLGPAG-PGAGGSGVASPTI 626
+ + P G P P TP L G PA P + G+A+P+
Sbjct: 1155 TPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSP 1214
Query: 627 TVAMPGVPAFLQGMTDFLQATQTAPPPPPPPPPPPPAPE--QQTMPPPGSPSGGAGSPGG 684
A P PA AT + P P PP+P+ T PP G+P+ A +P
Sbjct: 1215 KGA-PTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAATPPS 1273
Query: 685 L 685
L
Sbjct: 1274 L 1274
Score = 58.9 bits (141), Expect = 3e-08
Identities = 85/328 (25%), Positives = 118/328 (35%), Gaps = 60/328 (18%)
Query: 383 GNGTRPPPTPNA-EAPPPGPGQASSVAPSSTNVESSAEGAPPPGPAPPPATSHP---RVI 438
G T P P A E P P ++ AP +T V + P P+ PPA + P +V
Sbjct: 693 GTLTTLPLVPTASENCPVAPSPQNTCAPLATLVLAPEIPKSVPSPSLPPAGTPPGTKKVD 752
Query: 439 RISHQSVEPVVMMHMNIQDSGTQPGGVPSAPTGPLGPPGHGQTLGQQVPGFPTAPTRVVI 498
ISH S + + P P+ +G TL +P V +
Sbjct: 753 GISHTSA---------LAPVASSPKECPTEDSGASATASSKGTLTYLADS--PSPLGVSV 801
Query: 499 ARPT--PPQARPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLVGQLLMQPVLVAQGT-PG 555
+ T PP + S P+ +L+ VS + L + L QG+
Sbjct: 802 SPQTKRPPTKKGSAGPDTPI------------GNLSSPVSPVEASFLPENSLSFQGSKDS 849
Query: 556 MAPPPAPATASASAGTTNTATTAGPAPGGPAQPPPTPQPSMADLQFSQLLGNLLGPAGPG 615
A +P S T +A T G P TP PS+ +L F + GPA P
Sbjct: 850 PATTHSPTPPSPKGAPTPSAVTPLSPKGVTLPPKETPTPSVVNLPFPK-----EGPATPA 904
Query: 616 AGGSGVASPT--------ITVAMPGVPAFLQGMTDFLQATQTAPPPPPPPPPPP------ 661
+ S T T A G+PA + + AP PP PP P
Sbjct: 905 PKQAPALSMTSSSPKKARATPAPKGIPA--------SPSPKGAPTPPAATPPSPKGGPAT 956
Query: 662 PAPEQQTMPP---PGSPSGGAGSPGGLG 686
P+P+ PP P SP GG +P G
Sbjct: 957 PSPKWAPTPPAATPPSPKGGPATPSPKG 984
Score = 56.6 bits (135), Expect = 1e-07
Identities = 80/328 (24%), Positives = 104/328 (31%), Gaps = 59/328 (17%)
Query: 392 PNAEAPPPGPGQ---ASSVAPSSTNVESSAEGAPPPGPAPPPATSHPRVIRISHQSVEPV 448
P A +P P + AS+ A S + A+ P G + P T P + S P+
Sbjct: 762 PVASSPKECPTEDSGASATASSKGTLTYLADSPSPLGVSVSPQTKRPPTKKGSAGPDTPI 821
Query: 449 VMMH---------------MNIQDSGTQPGGVPS-APTGPLGPPGHGQTLGQQVPGFPTA 492
+ ++ Q S P S P P G P T P P
Sbjct: 822 GNLSSPVSPVEASFLPENSLSFQGSKDSPATTHSPTPPSPKGAP----TPSAVTPLSPKG 877
Query: 493 PTRVVIARPTPPQARPSHPG-GPPVSGTLQGAGLGTNASLAQMVSGLVGQLLMQPVLVAQ 551
T PTP P GP Q L +S + A+
Sbjct: 878 VTLPPKETPTPSVVNLPFPKEGPATPAPKQAPALSMTSSSPKK---------------AR 922
Query: 552 GTPGMAPPPAPATASASAGTTNTATTAGPAPGGPAQPPPTPQPSMADLQFSQLLGNLLGP 611
TP AP PA+ S T A T GGPA P P P+ G P
Sbjct: 923 ATP--APKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATP 980
Query: 612 AGPGAGGSGVASPTITVAMPGVPAFLQGMTDFLQATQTAPPPPPPPPPPP-------PAP 664
+ GA A+P P P+ + AP PP PP P P P
Sbjct: 981 SPKGAPTPPAATPPSPKGGPATPS-----------PKGAPTPPAVTPPSPKGSPAATPFP 1029
Query: 665 EQQTMPPPGSPSGGAGSPGGLGLESLSP 692
+ + PP +P GSP L +P
Sbjct: 1030 KGASTPPAATPPSPKGSPAATPLPKGAP 1057
Score = 53.9 bits (128), Expect = 8e-07
Identities = 82/339 (24%), Positives = 114/339 (33%), Gaps = 36/339 (10%)
Query: 389 PPTPNAEAPPPGPGQASSVAPSSTNVESSAEGAPPPGPAPPPATSHPRVIRISHQSVEPV 448
P TP A P P G A+ + ++ +P G A PP P + S +
Sbjct: 1126 PTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGG 1185
Query: 449 VMMHMNIQDSGTQPGGVPSAPTGPLGPPGH--GQTLGQQVPGFPTA--PTRVVIARPTPP 504
+ + + + T P P +P G L P T P P T PT P
Sbjct: 1186 LATP-SPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTP 1244
Query: 505 QARPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLVG---QLLMQPVLVA----QGTPGMA 557
A P P G P + +GA A+ + GL + P +V +G P +
Sbjct: 1245 AATPPSPKGGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATS 1304
Query: 558 PP-----PAPATASASAGTTNTATTAG---------PAPGG-PAQPPPTPQPSMADLQFS 602
PP P AT + G+ T G P+P G P P TP S
Sbjct: 1305 PPKGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPS 1364
Query: 603 QLLGNLLGPAGPGAGGSGVASPTITVAMPGVPAFLQGMTDFLQATQTAPPPPPPPPPPPP 662
G A P G +P P +P+ + T+P P P P
Sbjct: 1365 SKEGPTPPAATPSHKGGPAMTPPSPKRGPAIPS--------PKGDPTSPAVIPLSPKKAP 1416
Query: 663 APEQQTMPPPGSPSGGAGSPGGLGLESLSPEFFTSVVQG 701
A T +PS G +P + SL TS +G
Sbjct: 1417 A-TPVTREGAATPSKGDLTPPAVTPVSLKKAPATSAPKG 1454
Score = 53.1 bits (126), Expect = 1e-06
Identities = 110/482 (22%), Positives = 146/482 (30%), Gaps = 111/482 (23%)
Query: 342 ACTPPRH---LHVVRPMSHYTTPMVLQQA-----AIPIQINVGTTVTMT------GNGTR 387
A TPP L P TTP + A P TT T G T
Sbjct: 1199 AATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGPATP 1258
Query: 388 PP---PTPNAEAPP--------------PGPGQASSVAPSSTNVESSAEGAPPPGPAPPP 430
PP PTP A PP P P + +P S +GAP P A PP
Sbjct: 1259 PPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPP 1318
Query: 431 ATSHPRVIRISHQSVEPVVMMHMNIQDSGTQPGGVPSAPTGPLGPPG-HGQTLGQQVPGF 489
+ + P + + + + T P PS+ GP P G T P
Sbjct: 1319 SPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAATPSH 1378
Query: 490 PTAPTRVVIARPTP--------PQARPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLVGQ 541
P + P+P P+ P+ P P+S A T A G +
Sbjct: 1379 KGGPA---MTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKAPATPVTREGAATPSKGDLTP 1435
Query: 542 LLMQPVLVAQGTPGMAPPPAPATASASAGTTNTATT-----------------------A 578
+ PV + + AP PAT S+ T A T A
Sbjct: 1436 PAVTPVSLKKAPATSAPKGGPATPSSKGDPTLPAVTPPSPKEPPAPKQVATSSSPKKAPA 1495
Query: 579 GPAPGG-----------PAQPPPTPQPSMADLQFSQLLGNLLGPA--GPGAG----GSGV 621
PAP G P + P TP + + L + PA P V
Sbjct: 1496 TPAPMGAPTLPAVIPSSPKEVPATPSSRRDPIAPTATLLSKKTPATLAPKEALIPPAMTV 1555
Query: 622 ASPTITVAMPG-------------------VPAFLQGMTD----FLQATQTAPPP----- 653
SP T A+P P+ +G + T+P P
Sbjct: 1556 PSPKKTPAIPTPKEAPATPSSKEASSPPAVTPSTYKGAPSPKELLIPPAVTSPSPKEAPT 1615
Query: 654 PPPPPPPPPAPEQQTMPPPGSPSGGAGSPGGLGLESLSPEFFTSVVQGVLSSLLGSLGAR 713
PP PP P T P G+P+ +P L SP T + + L A+
Sbjct: 1616 PPAVTPPSPEKGPATPAPKGTPTSPPVTPSSLKDSPTSPASVTCKMGATVPQASKGLPAK 1675
Query: 714 AG 715
G
Sbjct: 1676 KG 1677
Score = 48.9 bits (115), Expect = 3e-05
Identities = 116/539 (21%), Positives = 164/539 (30%), Gaps = 85/539 (15%)
Query: 186 RGGPQPQHSQPPPQPPAVTPEPVALSSQT------------SEPVESEAPPREPMEAEEV 233
+GGP + P PPA TP + T + P P P +
Sbjct: 1252 KGGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPT 1311
Query: 234 EERAPAQNPELTPGPAPAGPTPAPETNAPNHPSPAEYVEVLQELQRLESRLQPFLQRYYE 293
A +P+ +PG P P P P P + S+ P E
Sbjct: 1312 PPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTP----SSKGGPTTPSSKE 1367
Query: 294 VLGAAATTDYNNNHEG-----REEDQRLINLVGESLRLLGNTFVALSDLRCNLACTPPRH 348
A T +H+G +R + + LS + TP
Sbjct: 1368 GPTPPAATP---SHKGGPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKA--PATPVTR 1422
Query: 349 LHVVRPMSHYTTPMVLQQAAIPIQINVGTTVTMTGNGTRPPPTPNAEAPPPGPGQASSVA 408
P TP A P+ + + G P TP+++ P P
Sbjct: 1423 EGAATPSKGDLTP----PAVTPVSLKKAPATSAPKGG---PATPSSKGDPTLP------- 1468
Query: 409 PSSTNVESSAEGAPPPGPAPPPATSHPRVIRISHQSVEPVVMMHMNIQDSGTQPGGVPSA 468
PP P PPA +V S P M + T P +PS+
Sbjct: 1469 -----------AVTPPSPKEPPAPK--QVATSSSPKKAPATPAPMG---APTLPAVIPSS 1512
Query: 469 PTGPLGPPGHGQTLGQQVPGFPTAPTRVVIARPTPPQARPSHPGGPPVSGTLQGAGLGTN 528
P P + P APT ++++ TP P PP
Sbjct: 1513 PKEVPATPSSRRD--------PIAPTATLLSKKTPATLAPKEALIPPAMTVPSPKKTPAI 1564
Query: 529 ASLAQMVSGLVGQLLMQPVLVAQGTPGMAP-------PPAPATASASAGTTNTATTAGPA 581
+ + + + P V T AP PPA + S T A T
Sbjct: 1565 PTPKEAPATPSSKEASSPPAVTPSTYKGAPSPKELLIPPAVTSPSPKEAPTPPAVTPPSP 1624
Query: 582 PGGPAQPPPTPQPSMADLQFSQLLGNLLGPAGPGAGGSGVASPTITVAMPGVPAFLQGMT 641
GPA P P P+ + S L + PA + T+ A G+PA +G T
Sbjct: 1625 EKGPATPAPKGTPTSPPVTPSSLKDSPTSPASV----TCKMGATVPQASKGLPA-KKGPT 1679
Query: 642 DFLQATQTAPPPPPPP---PPPPPAPEQQ----TMPP-PGSPSGGAGSPGGLGLESLSP 692
L+ AP P P P P+ + T PP PS GS G L + +P
Sbjct: 1680 -ALKEVLVAPAPESTPIITAPTRKGPQTKKSSATSPPICPDPSAKNGSKGPLSTVAPAP 1737
Score = 45.1 bits (105), Expect = 4e-04
Identities = 114/522 (21%), Positives = 158/522 (30%), Gaps = 161/522 (30%)
Query: 186 RGGPQPQHSQPPPQPPAVTPEPVALSSQTSEPVESEAPPREPMEAEEVEERAPAQNPELT 245
+GGP S+ P PAVTP P+EP ++V + + T
Sbjct: 1453 KGGPATPSSKGDPTLPAVTPPS----------------PKEPPAPKQVATSSSPKKAPAT 1496
Query: 246 PGPAPAGPTPAPETNAPNH--PSPAEYVEVLQELQRLESRLQPFLQRYYEVLGAAATTDY 303
P P A PA ++P +P+ + + L S+ P E L A T
Sbjct: 1497 PAPMGAPTLPAVIPSSPKEVPATPSSRRDPIAPTATLLSKKTPATLAPKEALIPPAMTVP 1556
Query: 304 NNNHEGREEDQRLINLVGESLRLLGNTFVALSDLRCNLACTPPRHLHVVRPMSHYTTPMV 363
+ + S A +PP TP
Sbjct: 1557 SPKKTPAIPTPKEAPATPSSKE----------------ASSPPA-----------VTPST 1589
Query: 364 LQQAAIPIQINVGTTVTMTGNGTRPPPTPNAEAPPPGPGQASSVAPSSTNVESSAEGAPP 423
+ A P ++ + VT + PTP A PP ++ AP T
Sbjct: 1590 YKGAPSPKELLIPPAVTSPS--PKEAPTPPAVTPPSPEKGPATPAPKGT----------- 1636
Query: 424 PGPAPPPATSHPRVIRISHQSVEPVVMMHMNIQDSGTQPGGV-----PSAPTGPLG-PPG 477
P PP T +++DS T P V + P G P
Sbjct: 1637 --PTSPPVTP-------------------SSLKDSPTSPASVTCKMGATVPQASKGLPAK 1675
Query: 478 HGQTLGQQVPGFPTAPTRVVIARPT--PPQARPSHPGGPPVSGTLQGAGLGTNASLAQMV 535
G T ++V P + +I PT PQ + S PP+
Sbjct: 1676 KGPTALKEVLVAPAPESTPIITAPTRKGPQTKKSSATSPPI------------------- 1716
Query: 536 SGLVGQLLMQPVLVAQGTPGMAPPPAPATASASAGTTNTATTAGPAPGGPAQPPPTPQPS 595
P P SA G+ +T PAP P Q +
Sbjct: 1717 ---------------------CPDP-----SAKNGSKGPLSTVAPAPLLPVQKDSSKTAK 1750
Query: 596 MADLQFSQLLGNLLGPAGPGAGGSGVASPTITVAMPGVPAFLQGMTDFLQATQTAPPPPP 655
D S P GP A AS +T A AF + + A+ +A P PP
Sbjct: 1751 GKDASHS--------PKGPLAPPESKASTPLTAA-----AFEKVLPKPESASVSAAPSPP 1797
Query: 656 ------PPPPPPPAPEQQTMPPPGSPSGGAGSPGGLGLESLS 691
P P P P+QQ +P S GL LES S
Sbjct: 1798 VSLPLAPSPVPTLPPKQQFLP----------SSPGLVLESPS 1829
Score = 43.9 bits (102), Expect = 9e-04
Identities = 86/396 (21%), Positives = 141/396 (35%), Gaps = 66/396 (16%)
Query: 340 NLACTPPRHLHVVRPMS-HYTTPMVLQQ-----------AAIPIQINVGTTVTMTGNGTR 387
++ C+P L+V S TT ++L+ A +P+ +VGTT + N
Sbjct: 390 SITCSPSGSLNVATSFSLSPTTSLILKSSPNATYHYPLVAQMPVS-SVGTTPLVVTNPCT 448
Query: 388 PPPTPNAE-------APPPGPGQASSVAPSSTNVESSAEGAPPPGPAPPPATSHPRVIRI 440
P +PP G S++ P+S A AP P+T +RI
Sbjct: 449 IAAAPTTTFEVATCVSPPMSSGPISNIEPTSPAALVMAPVAPKE-----PSTQVATTLRI 503
Query: 441 SHQSVEPVVMMHMNIQDSGTQPGGVPSAPTGPLGPPGHGQTLGQQVPGFPTAPTRVVIAR 500
V P + ++++ +PS+ QT+ + G P +P + +
Sbjct: 504 P---VSPPLPDPEDLKN-------LPSSVLVKFPTQKDLQTVPASLEGAPFSPAQAGLTT 553
Query: 501 PTPPQARPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLVGQLLMQPVLVAQGTPGMAPPP 560
P P P S + Q L+ + L + L +P+ + + M
Sbjct: 554 KKDPTVLPLVQAAPKNSPSFQSTSSSPEIPLSPEAT-LAKKSLGEPLPIGKPASSMT--- 609
Query: 561 APATASASAGTTNTATTAGPAPGGPAQPPPTPQPSMADLQFSQLLGNLLGPAGPGAGGSG 620
+P ++SA T + AGP GP P++A F + G A A G+
Sbjct: 610 SPLGVNSSASVIKTDSYAGPDSAGPLLKSSLITPTVA--AFPLESADPAGVAPTTAKGTS 667
Query: 621 ----VASP----TITVAMPGVPAFLQGMTDFLQATQTAPPPPPPPPPP------------ 660
ASP T+++A P +G L TA P P P
Sbjct: 668 TYTTTASPFLEGTVSLAPKNHPV-KEGTLTTLPLVPTASENCPVAPSPQNTCAPLATLVL 726
Query: 661 ----PPAPEQQTMPPPGSPSGGAGSPGGLGLESLSP 692
P + ++PP G+P G G +L+P
Sbjct: 727 APEIPKSVPSPSLPPAGTPPGTKKVDGISHTSALAP 762
Score = 41.6 bits (96), Expect = 0.004
Identities = 41/174 (23%), Positives = 63/174 (36%), Gaps = 9/174 (5%)
Query: 97 GASSGTGSASATHGGGSPPGTRGPGASVHDRNANSYVMVGTFNLPSDGSAVDVHINMEQA 156
G ++ + + T +PP +G A+ + A + T P G A
Sbjct: 1208 GLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPT-TPAATPPSPKGGPATPPPKGAPTP 1266
Query: 157 PIQSEPRVR--LVMAQHMIRDIQTLLSRMECRGGPQPQHSQPPPQPPAVTPEPVALSSQT 214
P + P ++ L H +++ +GGP + P PPA TP S T
Sbjct: 1267 PAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGT 1326
Query: 215 SEPVESEAPPREPMEAEEVEERAPAQNPELTPGP----APAGPTPAPETNAPNH 264
P + PP + + PA P GP + GPTP T P+H
Sbjct: 1327 PPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAAT--PSH 1378
Score = 40.0 bits (92), Expect = 0.012
Identities = 52/216 (24%), Positives = 75/216 (34%), Gaps = 17/216 (7%)
Query: 381 MTGNGTRPPPTPNAEAPPPGPGQASSVAPSSTNVESSAEGAPPPGPAPPPATSHPRVIRI 440
M G T P E P P A V P S+ + +A P PPP + P+ +
Sbjct: 1 MPGEATETVPATEQELPQPQAETA--VLPMSSALSVTAALGQPGPTLPPPCSPAPQQCPL 58
Query: 441 SHQSVEPVVMMHMNIQDSGTQPGGVPSAPTG---PLGPPGHGQTLGQQVPGFPTAPTRVV 497
S + I + + P + +G PLG T + G P +P +
Sbjct: 59 SAANQASPFPSPSTIASTPLEV-PFPQSSSGTALPLGTAPEAPTFLPNLIGPPISPAALA 117
Query: 498 IARPTPPQARPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLVGQLLMQPVLVAQGTPG-- 555
+A P P+ G P S L L ++ Q S LL P VA G
Sbjct: 118 LA---SPMIAPTLKGTPSSSAPLALVALAPHS--VQKSSAFPPNLLTSPPSVAVAESGSV 172
Query: 556 --MAPPPAPATASASAGTTNTATTAGPAPGGPAQPP 589
++ P AP+ + + P P G PP
Sbjct: 173 ITLSAPIAPSEPKTNLNKVPSEVV--PNPKGTPSPP 206
Score = 36.6 bits (83), Expect = 0.14
Identities = 45/195 (23%), Positives = 71/195 (36%), Gaps = 23/195 (11%)
Query: 922 HMPVGPDAILRYVRRVGDPPQPLPEEPMEVQGAERASPEPQRENASPAPGTTAEEAMSRG 981
H P GP A PP+ P+ E+ P+P+ + S AP ++
Sbjct: 1756 HSPKGPLA----------PPESKASTPLTAAAFEKVLPKPESASVSAAPSPPVSLPLAPS 1805
Query: 982 PPPA--PEGGSRDEQDGASAE--TEPWAAAVPPEWVPIIQQD-------IQSQRKVKPQP 1030
P P P+ G E ++P A A E +P+I + QS P P
Sbjct: 1806 PVPTLPPKQQFLPSSPGLVLESPSKPLAPADEDELLPLIPPEPISGGVPFQSVLVNMPTP 1865
Query: 1031 PLSDAYLSGMPAKR--RKTMQGEGPQLLLSEAVSRAAKAAGARPLTSPESLSRDLEAPEV 1088
+ + AK+ K +G G + E+V + + T L+ E E
Sbjct: 1866 KSAGIPVPTPSAKQPVTKNNKGSGTESDSDESVPELEEQDSTQATTQQAQLAAAAEIDEE 1925
Query: 1089 QESYRQQLRSDIQKR 1103
S +Q RS+ + R
Sbjct: 1926 PVSKAKQSRSEKKAR 1940
Score = 35.4 bits (80), Expect = 0.31
Identities = 86/381 (22%), Positives = 128/381 (33%), Gaps = 75/381 (19%)
Query: 365 QQAAIPIQINVGTTVTMTGNG-TRPPP-----------TPNAEAPPPGPGQASSVAPSST 412
+ A +P+ + T + G T PPP N +P P P +S
Sbjct: 22 ETAVLPMSSALSVTAALGQPGPTLPPPCSPAPQQCPLSAANQASPFPSPSTIASTPLEVP 81
Query: 413 NVESSAEGAPPPGPAPPPATSHPRVI--------------------RISHQSVEPVVMM- 451
+SS+ A P G AP T P +I + + S P+ ++
Sbjct: 82 FPQSSSGTALPLGTAPEAPTFLPNLIGPPISPAALALASPMIAPTLKGTPSSSAPLALVA 141
Query: 452 ---HMNIQDSGTQPGGVPSAPTGPLGPPGHGQTLGQQV-PGFPTA-----PTRVVI---A 499
H + S P + S P+ + G TL + P P P+ VV
Sbjct: 142 LAPHSVQKSSAFPPNLLTSPPSVAVAESGSVITLSAPIAPSEPKTNLNKVPSEVVPNPKG 201
Query: 500 RPTPP---QARPSHPGGPPVSGTLQGAGLG--TNASLAQMVSGLVGQLLMQPVLVAQGTP 554
P+PP P H P S A L T + + S V + VL++ P
Sbjct: 202 TPSPPCIVSTVPYHCVTPMASIQSGVASLPQTTPTTTLAIASPQVKDTTISSVLISPQNP 261
Query: 555 G---MAPPPAPATASASAGTTNTATTAGPAPGGPAQPPPTP---QPSMADLQFSQLLG-N 607
G + P +P A + + + T+ GP PP P +A L S
Sbjct: 262 GSLSLKGPVSPPAALSLSTQSLPVVTSSQKTAGPNTPPDFPISLGSHLAPLHQSSFGSVQ 321
Query: 608 LLGPAGPGA-------------GGSGVASPTITVAMPGVPAFLQGMTDFLQATQTA-PPP 653
LLG GP A +G + P+ +P +P+ + + AT A P
Sbjct: 322 LLGQTGPSALSDPTVKTISVDHSSTGASYPSQRSVIPPLPS----RNEVVPATVAAFPVV 377
Query: 654 PPPPPPPPPAPEQQTMPPPGS 674
P P T P GS
Sbjct: 378 APSVDKGPSTISSITCSPSGS 398
Score = 35.0 bits (79), Expect = 0.40
Identities = 89/434 (20%), Positives = 147/434 (33%), Gaps = 47/434 (10%)
Query: 191 PQHSQPPPQPPAVTPEPVA-LSSQTSEPVESEAPPREPMEAEEVEERAPAQNPEL-TPGP 248
P + P P+ +P+A ++ S+ + P+E + + +P + P + TP
Sbjct: 1510 PSSPKEVPATPSSRRDPIAPTATLLSKKTPATLAPKEALIPPAMTVPSPKKTPAIPTPKE 1569
Query: 249 APAGPTPAPETNAPNHPSPAEYVEVLQELQRLESRLQPFLQRYYEVLGAAATTDYNNNHE 308
APA P+ + E ++P +P+ Y + L A T
Sbjct: 1570 APATPS-SKEASSPPAVTPSTYKGAPSPKELLIPPAVTSPSPKEAPTPPAVTPPSPEKGP 1628
Query: 309 GREEDQRLINLVGESLRLLGNTFVALSDLRCNLACTPPRHLHVVRPMSHYTTPMVLQQAA 368
+ + L ++ + + + C + T P+ + T + A
Sbjct: 1629 ATPAPKGTPTSPPVTPSSLKDSPTSPASVTCKMGATVPQASKGLPAKKGPTALKEVLVAP 1688
Query: 369 IPIQINVGTTVTMTG------NGTRPPPTPNAEAPPPGPGQASSVAP---------SSTN 413
P + T T G + T PP P+ A G S+VAP SS
Sbjct: 1689 APESTPIITAPTRKGPQTKKSSATSPPICPDPSAKNGSKGPLSTVAPAPLLPVQKDSSKT 1748
Query: 414 VESSAEGAPPPGP-APPPATSHPRVIRISHQSVEPVVMMHMNIQDSGTQPGGVPSAPTGP 472
+ P GP APP + + + + + V P + V +AP+ P
Sbjct: 1749 AKGKDASHSPKGPLAPPESKASTPLTAAAFEKVLP-----------KPESASVSAAPSPP 1797
Query: 473 LGPPGHGQTLGQQVPGFPTAPTRVVIARPTPPQARPSHPGGPPVSGTLQGAGLGTNASLA 532
+ P AP+ V P Q PS PG S + A + L
Sbjct: 1798 V--------------SLPLAPSPVP-TLPPKQQFLPSSPGLVLESPSKPLAPADEDELLP 1842
Query: 533 QM-VSGLVGQLLMQPVLVAQGTPGMAPPPAPATASASAGTTNTATTAGPAPGGPAQPPPT 591
+ + G + Q VLV TP A P P ++ T N + + + P
Sbjct: 1843 LIPPEPISGGVPFQSVLVNMPTPKSAGIPVPTPSAKQPVTKNNKGSGTESDSDESVPELE 1902
Query: 592 PQPS-MADLQFSQL 604
Q S A Q +QL
Sbjct: 1903 EQDSTQATTQQAQL 1916
Score = 32.0 bits (71), Expect = 3.4
Identities = 18/72 (25%), Positives = 26/72 (36%), Gaps = 4/72 (5%)
Query: 943 PLPEEPMEVQGAERASPEPQRENASPAPGTTAEEAMSRGPPPAPEGGSRDEQDGASAETE 1002
P P + S P++ A+PAP +G P P + G + +
Sbjct: 900 PATPAPKQAPALSMTSSSPKKARATPAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSP 959
Query: 1003 PWA----AAVPP 1010
WA AA PP
Sbjct: 960 KWAPTPPAATPP 971
Score = 31.6 bits (70), Expect = 4.4
Identities = 49/194 (25%), Positives = 62/194 (31%), Gaps = 24/194 (12%)
Query: 88 APPQTHLPSGASSGTGSASATHGGGSPPGTRGPGASVHDRNANSYVMVGTFNLPSDGSAV 147
+P T P GAS T +PP +G A+ T P G A
Sbjct: 1022 SPAATPFPKGAS--------TPPAATPPSPKGSPAATPLPKGAPTTPAATLPSPKGGPAT 1073
Query: 148 DVHINMEQAPIQSEPRVRLVMAQHMIRD--IQTLLSRMECRGG-PQPQHSQPPPQPPAVT 204
P + P + A + + + +GG P H P P A
Sbjct: 1074 PSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAATP 1133
Query: 205 PEP---VALSSQTSEPVESEAPPREPME--AEEVEERAPAQNPELTPGPAPAG------P 253
P P +A P A P P A + AP P TP P+P G P
Sbjct: 1134 PSPKGGLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPT-TPAATP-PSPKGGLATPSP 1191
Query: 254 TPAPETNAPNHPSP 267
AP T A PSP
Sbjct: 1192 KGAPTTPAATPPSP 1205
Score = 30.8 bits (68), Expect = 7.6
Identities = 38/145 (26%), Positives = 50/145 (34%), Gaps = 27/145 (18%)
Query: 558 PPPAPATASASAGTTNTATTAGPAPGGPAQPPPTPQPSMADLQFSQLLGNLLGPAGPGAG 617
P P TA + + T A PG PP +P P L + A P
Sbjct: 17 PQPQAETAVLPMSSALSVTAALGQPGPTLPPPCSPAPQQCPL-------SAANQASPFPS 69
Query: 618 GSGVASPTITVAMPGVPAFLQGMTDFLQATQTAPPPP---PPPPPPPPAPEQQTMPPP-- 672
S +AS + V P Q + TAP P P PP +P + P
Sbjct: 70 PSTIASTPLEVPFP------QSSSGTALPLGTAPEAPTFLPNLIGPPISPAALALASPMI 123
Query: 673 -----GSPSGGAGSPGGLGLESLSP 692
G+PS A L L +L+P
Sbjct: 124 APTLKGTPSSSA----PLALVALAP 144
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 82.0 bits (201), Expect = 3e-15
Identities = 159/640 (24%), Positives = 219/640 (34%), Gaps = 70/640 (10%)
Query: 87 RAPPQTHLPSGASSGTGSASATHGGGSPPGTRGPGASVH-DRNANSYVMVGTFNLPSDGS 145
R P T P + S S T SP R P A R A+ + L S
Sbjct: 197 RPRPPTEGPRKSVSSASEHSTTEP--SPAARRRPSAGGGLQRPASRSLSSSATPLSSPAR 254
Query: 146 AVDVHINMEQAPIQ-SEPRVRLVMAQHMIRDIQTLLSRMECRGGPQPQHSQP--PPQPPA 202
+ +AP S+P+ + + A +R Q R + P S P P P
Sbjct: 255 SGPSARGTPRAPAHPSQPKPKGLQA---LRPPQVTPPRKDAAPALGPLSSSPLATPSPSG 311
Query: 203 VTPEPVALSSQTSEPVESEAPPREPMEAE-EVEERAPAQNPELTPGPAPAGPTPA---PE 258
PV + P+ + PP P+ + +P+ P L P+P P+ P
Sbjct: 312 TKARPVPPPDNAATPLPATLPPSPPLATPLPLAPPSPSAPPSLQTLPSPPATPPSQAPPS 371
Query: 259 TNAPNHPSPAEYVEVLQELQRLESRLQPFLQRYYEVLGAA---ATTDYNNNHEGREEDQR 315
P +P ++ + +Q S P LQ L + ATT G Q
Sbjct: 372 MTTPPMQAPPS-LQTIPPIQVPHSLTSPSLQAPPSPLALSSLQATTSL-----GSPTLQA 425
Query: 316 LINLVGESLRLLGNTFVALSDLRCNLACTPPRHLHVVRPMSHYTTPMV---LQQAAIPIQ 372
+ + S R + + S A TPP + P+S +P + L A P+
Sbjct: 426 THSFLTMSPRQTQASLTSPS----RPASTPPDSPPLQAPLSLPASPPLQTSLSPAVSPLS 481
Query: 373 --INVGTTVTMTGNGTRPPPTPNAEAPPPGPGQASSVAPSSTNVESSAEGAPP----PGP 426
+ + ++ + P P + P SS+AP S ++ PP P
Sbjct: 482 SPLTIHPLQALSSLASHSPQAPLSSLIMPPLETQSSLAPPSLQTPPASLTTPPLENLPSL 541
Query: 427 APPPATSHPRVIRISHQSVEPV---VMMHMNIQDSGTQPGGVPS--APTGPLGPPGHGQT 481
APPP + + H P + T P PS A P PP
Sbjct: 542 APPPLQTASAPLTTPHLETPPCPAPCPLQAPPSPLTTPPPETPSSIATPPPQAPPALASP 601
Query: 482 LGQQVPGFPTAPTRV-------VIARPTPPQARPSHPGGPPVSGTLQGAGLGTNASLAQM 534
Q +P P +P +A P P QA PS P PP+S + NA
Sbjct: 602 PLQGLPSPPLSPLATPPPQAPPXLALP-PLQAPPSPPASPPLSPLATPSPQAPNA----- 655
Query: 535 VSGLVGQLLMQPVLVAQGTPGMAP--PPA--PATASASAGTTNTATTAGPAPGGPAQPPP 590
L LL P P AP PPA P + SA+ + + A P P PP
Sbjct: 656 ---LAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPA 712
Query: 591 TPQPSMADLQFSQLLGNLLGP---AGPGAGGSGVASPTITVAMPGVPAFLQGMTDFLQAT 647
+P S + Q L P P S SP+ T P VP L LQ
Sbjct: 713 SPPMSPSATPPPQAPPPLAAPPLQVPPSPPASPPMSPSAT-PPPRVPPLLAAPP--LQVP 769
Query: 648 QTAP---PPPPPPPPPPPAPEQQTMPP-PGSPSGGAGSPG 683
+ P P P PPP AP PP PS A PG
Sbjct: 770 PSPPASLPMSPLAKPPPQAPPALATPPLQALPSPPASFPG 809
Score = 80.9 bits (198), Expect = 6e-15
Identities = 145/573 (25%), Positives = 192/573 (33%), Gaps = 75/573 (13%)
Query: 191 PQHSQPPPQPPAVTPEPVALSSQTSEPVESEAPPREPMEAEEVEERAPAQNPELTPGP-- 248
P +Q PP++ P +L++ E + S APP P++ P P P
Sbjct: 511 PLETQSSLAPPSLQTPPASLTTPPLENLPSLAPP--PLQTASAPLTTPHLETPPCPAPCP 568
Query: 249 --APAGP--TPAPETNAPNHPSPAEYVEVLQE--LQRLESR-LQPFLQRYYEVLGAAATT 301
AP P TP PET + P + L LQ L S L P + A
Sbjct: 569 LQAPPSPLTTPPPETPSSIATPPPQAPPALASPPLQGLPSPPLSPLATPPPQAPPXLALP 628
Query: 302 DYNNNHEGREEDQRLINLVGESLRLLGNTFVALSDLRCNLACTPPRHLHVVRPMSHYTTP 361
L L S + V L + +PP P S +P
Sbjct: 629 PLQAP-PSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSP 687
Query: 362 MVLQQAAIPIQINVGTTVTMTGNGTRPPPTPNAEAPPPGPGQASSVAPSSTNVESSAEGA 421
+ P + PP +P+A PP P +A V S +
Sbjct: 688 SATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAP---PPLAAPPLQVPPSPPAS 744
Query: 422 PPPGPAPPPATSHPRVIRISHQSVEPVVMMHMNIQDSGTQPGGVPSA-PTGPLGP-PGHG 479
PP P+ P P ++ V P + + P P A T PL P
Sbjct: 745 PPMSPSATPPPRVPPLLAAPPLQVPPSPPASLPMSPLAKPPPQAPPALATPPLQALPSPP 804
Query: 480 QTLGQQVPGFPTAPTRVVIARPTPPQARP-------SHPGGPPVSGTLQGAGLGTNASLA 532
+ Q P P+A + PPQA P P PP S TLQ
Sbjct: 805 ASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPD 864
Query: 533 QMVSGLVGQLLMQPVLVAQGTPGMAPPPAPATASAS-----AGTTNTATT---------A 578
VSG P L PG PPP+ + +S AG +++AT+ +
Sbjct: 865 TSVSG--------PRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDS 916
Query: 579 GPAPGGPAQPPPTPQPSMADLQFSQLLGNLLGPAGPGAGGSGVASPTITVAMPGVPAFLQ 638
GP G A PPP A+L GPA P A +P +P PA
Sbjct: 917 GPEGGAAASPPPD-----AELAACHPAAWSRGPAPPLAFRGAPGAP-----LPWPPATGP 966
Query: 639 GMTDFLQAT-QTAPPPPPPPPPPPPAPEQQTMPPPGSPSGGAGSPGGLGLESLSPE---- 693
G D L +T P P P P P PG+ G A + G G S SP+
Sbjct: 967 GSADGLCTIYETEGPESATPAPGALDPG----PSPGTSGGKAAAGAGAGASSRSPKQARL 1022
Query: 694 -------FFTSVVQGVLSS---LLGSLGARAGS 716
SVVQ +LS L + GA GS
Sbjct: 1023 GELPLGALQASVVQHLLSRTLLLAAAEGAAGGS 1055
Score = 74.3 bits (181), Expect = 6e-13
Identities = 108/406 (26%), Positives = 145/406 (35%), Gaps = 86/406 (21%)
Query: 346 PRHLHVVRPMSHYTTPMVLQQAAIPIQINVGTTVTMTGNGTRP-PPTPNAEAP-----PP 399
P+ L +RP A P+ + T + +G RP PP NA P PP
Sbjct: 274 PKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSGTKARPVPPPDNAATPLPATLPP 333
Query: 400 GPGQASSV--APSSTNVESSAEGAP-----PPGPAPPPATSHPRVIRISHQSVEPVVMMH 452
P A+ + AP S + S + P PP APP T+ P S Q++ P+ + H
Sbjct: 334 SPPLATPLPLAPPSPSAPPSLQTLPSPPATPPSQAPPSMTTPPMQAPPSLQTIPPIQVPH 393
Query: 453 MNIQDSGTQPGGVPSA-----PTGPLGPPGHGQTLG------QQVPGFPTAPTRVVIARP 501
++ Q P A T LG P T +Q T+P+R P
Sbjct: 394 -SLTSPSLQAPPSPLALSSLQATTSLGSPTLQATHSFLTMSPRQTQASLTSPSRPASTPP 452
Query: 502 TPP--QARPSHPGGPPVSGTLQGAGLGTNASLA----QMVSGLVGQL-------LMQPVL 548
P QA S P PP+ +L A ++ L Q +S L L+ P L
Sbjct: 453 DSPPLQAPLSLPASPPLQTSLSPAVSPLSSPLTIHPLQALSSLASHSPQAPLSSLIMPPL 512
Query: 549 VAQGT---------------------PGMAPPPAPATASASAGTTNTATTAGPAPGGPAQ 587
Q + P +APPP TASA T + T PAP P Q
Sbjct: 513 ETQSSLAPPSLQTPPASLTTPPLENLPSLAPPPLQ-TASAPLTTPHLETPPCPAPC-PLQ 570
Query: 588 PPPTPQPSMADLQFSQLLGNLLGPAGPGAGGSGVASPTITVAMPGVPAFLQGMTDFLQAT 647
PP+P L P P A+ P LQG+
Sbjct: 571 APPSP---------------LTTPPPETPSSIATPPPQAPPALASPP--LQGLP------ 607
Query: 648 QTAPPPPPPPPPPPPAPEQQTMPPPGSPSGGAGSPGGLGLESLSPE 693
+PP P PPP AP +PP +P SP L + SP+
Sbjct: 608 --SPPLSPLATPPPQAPPXLALPPLQAPPSPPASPPLSPLATPSPQ 651
Score = 60.1 bits (144), Expect = 1e-08
Identities = 100/446 (22%), Positives = 139/446 (31%), Gaps = 77/446 (17%)
Query: 196 PPPQPPAVTP--EPVALSSQTSEPVESEAPPR---EPMEAEEVEERAPAQNPELTPGPAP 250
PPP PP P P + S S+APP P++ +P +P TP P
Sbjct: 667 PPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQA 726
Query: 251 AGPTPAPETNAPNHPSPAEYVEVLQELQRLESRLQPFLQRYYEVLGAAATTDYNNNHEGR 310
P AP P P PA + R+ P L + + + +
Sbjct: 727 PPPLAAPPLQVPPSP-PAS--PPMSPSATPPPRVPPLLAAPPLQVPPSPPASLPMSPLAK 783
Query: 311 EEDQRLINLVGESLRLLGNTFVALSDLRCNLACTPPRHLHVVRPMSHYTTPMVLQQAAIP 370
Q L L+ L + PP P S + + A P
Sbjct: 784 PPPQAPPALATPPLQALPS---------------PPASFPGQAPFSPSASLPMSPLATPP 828
Query: 371 IQINVGTTVTMTGNGTRPPPTPNAEAP--PPGPGQASSVAPSSTNVESSAEGAPPPGPAP 428
Q + PP +P +AP PP PG +SV S + + PPP P+
Sbjct: 829 PQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSV--SGPRLTLALAPGPPPPPSR 886
Query: 429 PPATSHPRVIRISHQSVEPVVMMHMNIQDSGTQPGGVPSAPTGPLGPPGHGQTLGQQVPG 488
P+++ H S + DSG + G S P +
Sbjct: 887 SPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPD-----------AELAAC 935
Query: 489 FPTAPTRVVIARPTPPQARPSHPGG----PPVSGTLQGAGLGTNASLAQMVSGLVGQLLM 544
P A +R P PP A PG PP +G GL T
Sbjct: 936 HPAAWSR----GPAPPLAFRGAPGAPLPWPPATGPGSADGLCT----------------- 974
Query: 545 QPVLVAQGTPGMAPPPAPATASASAGTTNTATTAGPAPGGPAQPPPTPQPSMADLQFSQL 604
+ +G P P S GT+ AG G ++ P Q + +L L
Sbjct: 975 --IYETEGPESATPAPGALDPGPSPGTSGGKAAAGAGAGASSRSP--KQARLGELPLGAL 1030
Query: 605 LGN----------LLGPAGPGAGGSG 620
+ LL A AGGSG
Sbjct: 1031 QASVVQHLLSRTLLLAAAEGAAGGSG 1056
Score = 58.5 bits (140), Expect = 3e-08
Identities = 80/310 (25%), Positives = 105/310 (33%), Gaps = 42/310 (13%)
Query: 399 PGPGQASSVAPSSTNVESSAEGAPPPGPA--PPPATSHPRVIRIS---HQSVEPVVMMHM 453
P PG S + + G P P P+ P P T PR S H + EP
Sbjct: 167 PTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARR 226
Query: 454 NIQDSG--TQPGGVP-SAPTGPLGPPGHGQTLGQQVPGFPTAPTRVVIARP------TPP 504
G +P S+ PL P G G P AP +P PP
Sbjct: 227 RPSAGGGLQRPASRSLSSSATPLSSPARS---GPSARGTPRAPAHPSQPKPKGLQALRPP 283
Query: 505 QARPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLVGQLLMQPVLVAQGTPGMAPP----- 559
Q P P G L + L T + SG + + P A P PP
Sbjct: 284 QVTPPRKDAAPALGPLSSSPLATPSP-----SGTKARPVPPPDNAATPLPATLPPSPPLA 338
Query: 560 -PAPATASASAGTTNTATTAGPAPGGPAQPPP---TP----QPSMADLQFSQLLGNLLGP 611
P P + + + T P P+Q PP TP PS+ + Q+ +L P
Sbjct: 339 TPLPLAPPSPSAPPSLQTLPSPPATPPSQAPPSMTTPPMQAPPSLQTIPPIQVPHSLTSP 398
Query: 612 ---AGPGAGGSGVASPTITVAMPGVPA---FLQGMTDFLQATQTAPPPPPPPPPPPPAPE 665
A P T ++ P + A FL QA+ T+P P PP P P
Sbjct: 399 SLQAPPSPLALSSLQATTSLGSPTLQATHSFLTMSPRQTQASLTSPSRPASTPPDSP-PL 457
Query: 666 QQTMPPPGSP 675
Q + P SP
Sbjct: 458 QAPLSLPASP 467
Score = 40.0 bits (92), Expect = 0.012
Identities = 75/287 (26%), Positives = 100/287 (34%), Gaps = 28/287 (9%)
Query: 422 PPPGPAPPPATSHPRVIRISHQSVEPVVMMHMNIQDSGTQPGGVP-SAPTGPLGPPGHGQ 480
PP P PPP + P +R+ + V + + G +P SAP GP
Sbjct: 29 PPGSPRPPPPVT-PAALRVLG-AAGAVGRKPLAERAGGIGGATIPESAPRA--GPTRSAG 84
Query: 481 TLGQQVPGFPTAPTRVVIARPTP-----PQARPSHPGGPPVSGTLQGAGLGTNASLAQMV 535
T + P A R A P P + P G G L GL +A +
Sbjct: 85 TSSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAE-ETVA 143
Query: 536 SGLVGQLLMQPVLVAQG-------TPGMAPPPAPATASASAGTTNTATTAGPAPGGPAQP 588
G + + L A TPG P PA A S +AGT PAP +
Sbjct: 144 RGKATEAPKRSALSAGARRDTSGPTPG-TPSPAMARRSRAAGTE--VGLPRPAPSARPR- 199
Query: 589 PPTPQPSMADLQFSQLLGNLLGPAG---PGAGGSGVASPTITVAMPGVPAFLQGMTDFLQ 645
PPT P + S+ PA P AGG + +++ P L
Sbjct: 200 PPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATP--LSSPARSGP 257
Query: 646 ATQTAPPPPPPPPPPPPAPEQQTMPPPGSPSGGAGSPGGLGLESLSP 692
+ + P P P P P Q PP +P +P LG S SP
Sbjct: 258 SARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAP-ALGPLSSSP 303
Score = 36.6 bits (83), Expect = 0.14
Identities = 46/197 (23%), Positives = 60/197 (30%), Gaps = 28/197 (14%)
Query: 501 PTPPQA-RPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLVGQLLMQPVLVAQGTPGMAPP 559
P PP + RP P P L AG LA+ G+ G + P AP
Sbjct: 27 PRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATI----------PESAPR 76
Query: 560 PAPATASASAGTTNTATTAGPAPGGPAQPPPTPQPSMADLQFSQLLGNLLGPAGPGAGGS 619
P T SA + N A+ PA G + PP S + P G G
Sbjct: 77 AGP-TRSAGTSSRNPASRP-PASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGL 134
Query: 620 GVASPTITVAMPGVPAFLQGMTDFLQATQTAPPPPPPPPP---------------PPPAP 664
+++ A + T+ P P P P P PAP
Sbjct: 135 RISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAP 194
Query: 665 EQQTMPPPGSPSGGAGS 681
+ PP P S
Sbjct: 195 SARPRPPTEGPRKSVSS 211
Score = 34.3 bits (77), Expect = 0.68
Identities = 45/197 (22%), Positives = 69/197 (35%), Gaps = 29/197 (14%)
Query: 88 APPQTHLPSGASSGTGSASATHGGGSPPGTRGPGASVHDRNANSYVMV------GTFNLP 141
AP ++ L +GA T G PGT P + R A + V + P
Sbjct: 150 APKRSALSAGARRDTS--------GPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPP 201
Query: 142 SDGSAVDVHINMEQAPIQSEPRVRLVM---------AQHMIRDIQTLLSRMECRGGPQPQ 192
++G V E + + P R A + T LS R GP +
Sbjct: 202 TEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSS-PARSGPSAR 260
Query: 193 HSQPPPQPPAVTPEPVALSS----QTSEPVESEAPPREPMEAEEVEERAPAQNPELTPGP 248
+ P P+ P+P L + Q + P + AP P+ + + +P+ P
Sbjct: 261 GTPRAPAHPS-QPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSGTKARPVPP 319
Query: 249 APAGPTPAPETNAPNHP 265
TP P T P+ P
Sbjct: 320 PDNAATPLPATLPPSPP 336
Score = 34.3 bits (77), Expect = 0.68
Identities = 35/146 (23%), Positives = 54/146 (36%), Gaps = 13/146 (8%)
Query: 941 PQPLPEEPMEVQGAERASPEPQRENASPAPGTTAEEAMSRGPPPAPEGGSRDEQDGASAE 1000
P LP P A+P P A P+P PP P + +
Sbjct: 328 PATLPPSP------PLATPLPL---APPSPSAPPSLQTLPSPPATPPSQAPPSMTTPPMQ 378
Query: 1001 TEPWAAAVPPEWVPIIQQDIQSQRKVKPQPPLSDAYLSGMPAKRRKTMQGEGPQLLLSEA 1060
P +PP VP + S P PL+ + L + T+Q L +S
Sbjct: 379 APPSLQTIPPIQVP---HSLTSPSLQAPPSPLALSSLQATTSLGSPTLQATHSFLTMSPR 435
Query: 1061 VSRAAKAAGARPLTSPESLSRDLEAP 1086
++A+ + +RP ++P S L+AP
Sbjct: 436 QTQASLTSPSRPASTPPD-SPPLQAP 460
Score = 33.9 bits (76), Expect = 0.89
Identities = 23/73 (31%), Positives = 30/73 (41%), Gaps = 4/73 (5%)
Query: 189 PQPQHSQPPPQPPAVTPEPVALSSQTSEPVES--EAPPREPMEAEEVEERAPAQNPELTP 246
P + PPPQ P V P+ L S P +AP R P + P L P
Sbjct: 820 PMSPLATPPPQAPPVLAAPL-LQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAP 878
Query: 247 GPAPAGPTPAPET 259
GP P P+ +P +
Sbjct: 879 GPPPP-PSRSPSS 890
Score = 30.8 bits (68), Expect = 7.6
Identities = 40/145 (27%), Positives = 52/145 (35%), Gaps = 11/145 (7%)
Query: 561 APATASASAGTTNTATTAGPAPGGPAQPPPTPQP-SMADLQFSQLLGNLLGPAGPGAGGS 619
A A A+A P P G +PPP P ++ L + +G P AGG
Sbjct: 8 AKAGAAARTPAARAPGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGR--KPLAERAGGI 65
Query: 620 GVASPTITVAMPGVPAFLQGMTDFLQATQTAPPPPPPPPPPPPAPEQQTMPPPGSPSG-- 677
G A TI + P T + A PP P + T P P S G
Sbjct: 66 GGA--TIPESAPRAGPTRSAGT---SSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRA 120
Query: 678 -GAGSPGGLGLESLSPEFFTSVVQG 701
G PG LG + L +V +G
Sbjct: 121 SGTTRPGPLGQKGLRISAEETVARG 145
Score = 30.8 bits (68), Expect = 7.6
Identities = 31/148 (20%), Positives = 53/148 (35%), Gaps = 11/148 (7%)
Query: 940 PPQPLPEEPMEVQGAERASPEPQRENASPAPGTTAEEAMSRGPPPAPEGGSRDEQDGASA 999
P P +P +Q P R++A+PA G + ++ P+P G
Sbjct: 266 PAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLA---TPSPSGTKARPVPPPDN 322
Query: 1000 ETEPWAAAVPPEWVPIIQQDIQSQRKVKPQPPLSDAYLSGMPAKRRKTMQGEGPQLLLSE 1059
P A +PP + + + P P + L +P+ T + P + +
Sbjct: 323 AATPLPATLPP------SPPLATPLPLAPPSPSAPPSLQTLPSP-PATPPSQAPPSMTTP 375
Query: 1060 AVSRAAKAAGARPLTSPESL-SRDLEAP 1086
+ P+ P SL S L+AP
Sbjct: 376 PMQAPPSLQTIPPIQVPHSLTSPSLQAP 403
>gi|46852161 methyl-CpG binding domain protein 6 [Homo sapiens]
Length = 1003
Score = 80.9 bits (198), Expect = 6e-15
Identities = 164/675 (24%), Positives = 228/675 (33%), Gaps = 116/675 (17%)
Query: 87 RAPPQTHLPSGASSGTGSASATHGGGSPPGTRGPGASVHDRNANSYVMVGTFNLPSDGSA 146
R PP T L G S + + P GPG R A+ +PS GS+
Sbjct: 150 RVPPTTPLNGGPGSLPPEPPSV--SQAFPTLAGPGGLFPPRLADP--------VPSGGSS 199
Query: 147 VDVHINMEQAPIQSEPRVRLVM----AQHMIRDIQTLLSRMECRGGPQPQHSQPPPQPP- 201
+ AP + P + + + +++ L + P P S PP P
Sbjct: 200 SPRFLPRGNAPSPAPPPPPAISLNAPSYNWGAALRSSLVPSDLGSPPAPHASSSPPSDPP 259
Query: 202 ------AVTPEPVALSSQ-------TSEPVESEAPPREPMEAEEVEERAPAQNPELTPGP 248
A+TP P+ S+ S+P S A P+ + + P P
Sbjct: 260 LFHCSDALTPPPLPPSNNLPAHPGPASQPPVSSATMHLPLVLGPLGGAPTVEGPGAPPFL 319
Query: 249 APAGPTPAPETNAPNHPSPAEYVEVLQELQRLESRLQPFLQRYYEVLGAAATTDYNNNHE 308
A + + A + P P P+ LQ R Q A + ++++
Sbjct: 320 ASSLLSAAAKAQHPPLPPPST-------LQGRRPRAQ------------APSASHSSSLR 360
Query: 309 GREEDQRLINLVGESLRLLGNTFVALSDLRCNLACTPPRHLHVVRPMSHYTTPMVLQQAA 368
+ R V L G S R P+ + P S P VL
Sbjct: 361 PSQRRPRRPPTVFRLLEGRGPQTPRRS--RPRAPAPVPQPFSLPEP-SQPILPSVLSLLG 417
Query: 369 IPI---QINVGTTVTMTGNGTRPPPTPNAEAPPPGPGQASSVAPSSTNVESSAEGAPPPG 425
+P + G+ + + PPP + PP P + PS S + + P
Sbjct: 418 LPTPGPSHSDGSFNLLGSDAHLPPPPTLSSGSPPQPRHP--IQPSLPGTTSGSLSSVPGA 475
Query: 426 PAPPPATSHPRVIRISHQSVEPVVMMHMNIQDSGTQPGGVPSAPTGPLGP------PGHG 479
PAPP A+ P V PV+ G G P+ P PL P
Sbjct: 476 PAPPAASKAPVV-------PSPVLQS----PSEGLGMGAGPACPLPPLAGGEAFPFPSPE 524
Query: 480 QTLGQQVPGFPTAPTRVVIARPTPPQARPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLV 539
Q L GFP ++ A P P G PP S L N SL +++G
Sbjct: 525 QGLALSGAGFPG----MLGALPLPLSL-----GQPPPSPLL-------NHSLFGVLTGGG 568
Query: 540 GQLLMQPVLVAQGTPGMAPPPAPATASASAGTTNTATTAGPAPGGPAQPPPTPQPSMADL 599
GQ +P+L G PG PP AP G + + P P PPP+ PS
Sbjct: 569 GQPPPEPLLPPPGGPG--PPLAPGEPE---GPSLLVASLLPPPPSDLLPPPSAPPSNLLA 623
Query: 600 QFSQLLG-------------NLLGPAGPGAGGSGVASPTITVAMPGVPAFLQGMTDFLQA 646
F LL GP+G G G SP + + P + + L A
Sbjct: 624 SFLPLLALGPTAGDGEGSAEGAGGPSGEPFSGLGDLSPLLFPPLSAPPTLIALNSALLAA 683
Query: 647 TQTAPPPPPPPP---------PPPPAPEQQTMPPPGSPSGGAGSPGGLGLESLSPEFFTS 697
T P PP P PP + T P S G A S G + LSP S
Sbjct: 684 TLDPPSGTPPQPCVLSAPQPGPPTSSVTTATTDPGASSLGKAPSNSGRPPQLLSPLLGAS 743
Query: 698 VVQGVLSSLLGSLGA 712
++ G LSSL S GA
Sbjct: 744 LL-GDLSSLTSSPGA 757
Score = 75.5 bits (184), Expect = 3e-13
Identities = 137/590 (23%), Positives = 194/590 (32%), Gaps = 138/590 (23%)
Query: 194 SQPPPQPPAVTPE---PVALSSQTSEPVESEAPPREPMEAEEVEERAPAQNPELTPGPAP 250
+Q PP PP T + P A + S R P V + P+ P
Sbjct: 330 AQHPPLPPPSTLQGRRPRAQAPSASHSSSLRPSQRRPRRPPTVFRLLEGRGPQTPRRSRP 389
Query: 251 AGPTPAPETNAPNHPSPAEYVEVLQELQRLESRLQPFLQRYYEVLGAAATTDYNNNHEGR 310
P P P+ + PS QP L +LG G
Sbjct: 390 RAPAPVPQPFSLPEPS------------------QPILPSVLSLLGLPT--------PGP 423
Query: 311 EEDQRLINLVGESLRLLGNTFVALSDLRCNLACTPPRHLHVVRPMSHYTTPMVLQQAAIP 370
NL+G L ++ + +PP+ H ++P TT L +++P
Sbjct: 424 SHSDGSFNLLGSDAHLPPPPTLS--------SGSPPQPRHPIQPSLPGTTSGSL--SSVP 473
Query: 371 IQINVGTTVTMTGNGTRPPPTPNAEAPPPGPGQASSVA---PSSTNVESSAEGAPPPGPA 427
G + P+P ++P G G + A P E+ +P G A
Sbjct: 474 -----GAPAPPAASKAPVVPSPVLQSPSEGLGMGAGPACPLPPLAGGEAFPFPSPEQGLA 528
Query: 428 ------PPPATSHPRVIRISHQSVEPVVMMHMNIQDSGTQPGGVPSAPTGPLGPP--GHG 479
P + P + + P+ +N G GG P PL PP G G
Sbjct: 529 LSGAGFPGMLGALPLPLSLGQPPPSPL----LNHSLFGVLTGGGGQPPPEPLLPPPGGPG 584
Query: 480 QTLGQQVPGFPTAPTRVVIA-RPTPPQARPSHPGGP---------------PVSGTLQGA 523
L PG P P+ +V + P PP P P P +G +G+
Sbjct: 585 PPL---APGEPEGPSLLVASLLPPPPSDLLPPPSAPPSNLLASFLPLLALGPTAGDGEGS 641
Query: 524 GLGTNASLAQMVSGL--VGQLLMQPV-----LVA-------------QGTPGM-----AP 558
G + SGL + LL P+ L+A GTP AP
Sbjct: 642 AEGAGGPSGEPFSGLGDLSPLLFPPLSAPPTLIALNSALLAATLDPPSGTPPQPCVLSAP 701
Query: 559 PPAPATASASAGTTNT-ATTAGPAPGGPAQPPPTPQPSMADLQFSQL---------LGNL 608
P P T+S + TT+ A++ G AP +PP P + L L +L
Sbjct: 702 QPGPPTSSVTTATTDPGASSLGKAPSNSGRPPQLLSPLLGASLLGDLSSLTSSPGALPSL 761
Query: 609 LGPAGPGAGG--------SGVASPTITVAMPGVPAFLQGMTDFLQATQTAPPPPPPP--- 657
L P GP G G A P ++ A + LQ + + + PP P
Sbjct: 762 LQPPGPLLSGQLGLQLLPGGGAPPPLSEASSPLACLLQSLQIPPEQPEAPCLPPESPASA 821
Query: 658 --PPPPPAPEQQTMPPPGSP------------SGGAGSPGGLGLESLSPE 693
P P P PP GSP SG G GG GL ++ E
Sbjct: 822 LEPEPARPPLSALAPPHGSPDPPVPELLTGRGSGKRGRRGGGGLRGINGE 871
Score = 52.4 bits (124), Expect = 2e-06
Identities = 97/381 (25%), Positives = 121/381 (31%), Gaps = 71/381 (18%)
Query: 383 GNGTRPPPTP------NAEAPPPGPGQASSVAPSSTNVESSAEGAPPPGPAPPPATSHPR 436
GN P P P NA + G SS+ PS G+PP A S P
Sbjct: 207 GNAPSPAPPPPPAISLNAPSYNWGAALRSSLVPSDL-------GSPPAPHASSSPPSDPP 259
Query: 437 VIRISHQSVEPVVMMHMNIQDSGTQPGGVPSAPTGP--------LGPPGHGQTLGQQVPG 488
+ S P + N+ PG P LGP G T+ + PG
Sbjct: 260 LFHCSDALTPPPLPPSNNLP---AHPGPASQPPVSSATMHLPLVLGPLGGAPTV--EGPG 314
Query: 489 FPTAPTRVVIARPTPPQARPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLVGQLLMQPVL 548
P +++ A+ HP PP S TLQG A A S L
Sbjct: 315 APPFLASSLLS----AAAKAQHPPLPPPS-TLQGRRPRAQAPSASHSSSL---------- 359
Query: 549 VAQGTPGMAPPPAPATASASAGTTNTATTAGPAPGGPAQPPPTPQPSMADLQFSQLLGNL 608
P P P T T P P P P PQP +L ++
Sbjct: 360 ----RPSQRRPRRPPTVFRLLEGRGPQT---PRRSRPRAPAPVPQPFSLPEPSQPILPSV 412
Query: 609 LGPAGPGAGGSGVASPTITVAMPGVPAFLQGMTDFLQATQTAPPPPPPPPPPPPAPEQQT 668
L G + PG P+ G + L + PPPP PP P
Sbjct: 413 LSLLG--------------LPTPG-PSHSDGSFNLLGSDAHLPPPPTLSSGSPPQPRHPI 457
Query: 669 MPP-PGSPSGGAGS-PGGLGLESLSPEFFTSVVQGVLSSLLGSLGARAGSSESIAAFIQR 726
P PG+ SG S PG + S V VL S LG AG A +
Sbjct: 458 QPSLPGTTSGSLSSVPGAPAPPAASKA--PVVPSPVLQSPSEGLGMGAGP----ACPLPP 511
Query: 727 LSGSSNIFEPGADGALGFFGA 747
L+G P + L GA
Sbjct: 512 LAGGEAFPFPSPEQGLALSGA 532
Score = 43.5 bits (101), Expect = 0.001
Identities = 62/245 (25%), Positives = 79/245 (32%), Gaps = 71/245 (28%)
Query: 481 TLGQQVPGFPTAPTRVVIARPTPPQARPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLVG 540
T PG +P P PP ARP P P + L G G
Sbjct: 120 TCSHSSPGEGASPQMFHTVSPGPPSARP--PCRVPPTTPLNGG---------------PG 162
Query: 541 QLLMQPVLVAQGTPGMAPP----------PAPATASASAGTTNTATTAGPAPGGPAQPPP 590
L +P V+Q P +A P P P+ S+S PA PPP
Sbjct: 163 SLPPEPPSVSQAFPTLAGPGGLFPPRLADPVPSGGSSSPRFLPRGNAPSPA------PPP 216
Query: 591 TPQPSM--------ADLQFSQLLGNLLGPAGPGAGGSGVASPTITVAMPGVPAFLQGMTD 642
P S+ A L+ S + +L P P A S + P +
Sbjct: 217 PPAISLNAPSYNWGAALRSSLVPSDLGSPPAPHASSSPPSDPPL---------------- 260
Query: 643 FLQATQTAPPPPPPPPPPPPAPEQQTMPPPGS----------PSGGAGSPGGLGLESLSP 692
F + PPP PP P P + PP S P GGA + G G +P
Sbjct: 261 FHCSDALTPPPLPPSNNLPAHPGPASQPPVSSATMHLPLVLGPLGGAPTVEGPG----AP 316
Query: 693 EFFTS 697
F S
Sbjct: 317 PFLAS 321
Score = 42.4 bits (98), Expect = 0.003
Identities = 69/267 (25%), Positives = 86/267 (32%), Gaps = 41/267 (15%)
Query: 416 SSAEGAPPP-----GPAPPPATSHPRVIRISHQSVEPVVMMHMNIQDSGTQPGGVPSAPT 470
S EGA P P PP A RV P ++ +P V A
Sbjct: 125 SPGEGASPQMFHTVSPGPPSARPPCRV--------PPTTPLNGGPGSLPPEPPSVSQAFP 176
Query: 471 GPLGPPG-HGQTLGQQVPGFPTAPTRVVIARPTPPQARPSHPGGPPVSGTLQGAGLGTNA 529
GP G L VP ++ R + P A P PP + +L A
Sbjct: 177 TLAGPGGLFPPRLADPVPSGGSSSPRFLPRGNAPSPAPP-----PPPAISLNAPSYNWGA 231
Query: 530 SLAQMVSGLVGQLLMQPVLVAQGTPGMAPPPAPATASASAGTTNTATTAGPAPGGPAQPP 589
+L S LV L P + + PP + A + PA GPA P
Sbjct: 232 ALR---SSLVPSDLGSPPAPHASSSPPSDPPLFHCSDALTPPPLPPSNNLPAHPGPASQP 288
Query: 590 PTPQPSMADLQFSQLLGNLLGPAGPGAGGSGVASPTITVAMPGVPAFLQGMTDFLQATQT 649
P +M L +LGP G TV PG P FL + L A
Sbjct: 289 PVSSATMH-------LPLVLGPLGGAP----------TVEGPGAPPFL--ASSLLSAAAK 329
Query: 650 APPPPPPPPPPPPAPEQQTMPPPGSPS 676
A PP PPP + P S S
Sbjct: 330 AQHPPLPPPSTLQGRRPRAQAPSASHS 356
Score = 32.3 bits (72), Expect = 2.6
Identities = 22/68 (32%), Positives = 26/68 (38%), Gaps = 3/68 (4%)
Query: 191 PQHSQPPPQPPAVTPEPVALSSQTSEPVESEA---PPREPMEAEEVEERAPAQNPELTPG 247
P PPP A +P L S P + EA PP P A E E P + P
Sbjct: 779 PGGGAPPPLSEASSPLACLLQSLQIPPEQPEAPCLPPESPASALEPEPARPPLSALAPPH 838
Query: 248 PAPAGPTP 255
+P P P
Sbjct: 839 GSPDPPVP 846
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 80.1 bits (196), Expect = 1e-14
Identities = 171/694 (24%), Positives = 238/694 (34%), Gaps = 122/694 (17%)
Query: 88 APPQTHLPSGASSGTGSASATHGGGSPPGTRGPGASVHDRNANSYVMV------GTFNLP 141
AP ++ L +GA T G PGT P + R A + V + P
Sbjct: 150 APKRSALSAGARRDTS--------GPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPP 201
Query: 142 SDGSAVDVHINMEQAPIQSEPRVRLVM---------AQHMIRDIQTLLSRMECRGGPQPQ 192
++G V E + + P R A + T LS R GP +
Sbjct: 202 TEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSS-PARSGPSAR 260
Query: 193 HSQPPPQPPAVTPEPVALSS----QTSEPVESEAPPREPMEAEEVEERAPAQNPELTPGP 248
+ P P+ P+P L + Q + P + AP P+ + +P TP P
Sbjct: 261 GTPRAPAHPS-QPKPKGLQALRPPQVTPPRKDAAPALGPLSS----------SPLATPSP 309
Query: 249 APAGPTPAPETNAPNHPSPAEYVEVLQELQRLESRLQPFLQRYYEVLGAAATTDYNNNHE 308
+ A + AP T S + ++ L P + L + T
Sbjct: 310 SAALQSQAPPTLPATPHSSSLTCQLATPLPLAPP--SPSAPPSLQTLPSPPATP------ 361
Query: 309 GREEDQRLINLVGESLRLLGNTFVALSDLRCNLACTPPRHLHVVR------PMSHYTTPM 362
Q +L +L+ ++F+ L LA PP+ + P S +P
Sbjct: 362 ---PSQATTSLGSPTLQAT-HSFLPSPPLS-PLATPPPQAPPALALPPLQAPPSPPASPP 416
Query: 363 VLQQAAIPIQINVGTTVTMTGNGTRPPPTPNAEAP---PPGPGQASSVAPSSTNVESSAE 419
+ A Q V + PPP+P +AP P P + S P S S A
Sbjct: 417 LSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLA- 475
Query: 420 GAPPPGPAPPPATSHPRVIRISHQSVEPVVMMHMNIQDSGTQPGGVPSAPTGPLGP-PGH 478
APP P P S P + P + +Q + P P+ T PL P
Sbjct: 476 -APPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSP 534
Query: 479 GQTLGQQVPGFPTAPTRVVIARPTPPQARP-------SHPGGPPVSGTLQGAGLGTNASL 531
+ Q P P+A + PPQA P P PP S TLQ
Sbjct: 535 PASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGP 594
Query: 532 AQMVSGLVGQLLMQPVLVAQGTPGMAPPPAPATASAS-----AGTTNTATT--------- 577
VSG P L PG PPP+ + +S AG +++AT+
Sbjct: 595 DTSVSG--------PRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYD 646
Query: 578 AGPAPGGPAQPPPTPQPSMADLQFSQLLGNLLGPAGPGAGGSGVASPTITVAMPGVPAFL 637
+GP G A PPP A+L GPA P A +P +P PA
Sbjct: 647 SGPEGGAAASPPPD-----AELAACHPAAWSRGPAPPLAFRGAPGAP-----LPWPPATG 696
Query: 638 QGMTDFLQAT-QTAPPPPPPPPPPPPAPEQQTMPPPGSPSGGAGSPGGLGLESLSPE--- 693
G D L +T P P P P P PG+ G A + G G S SP+
Sbjct: 697 PGSADGLCTIYETEGPESATPAPGALDPG----PSPGTSGGKAAAGAGAGASSRSPKQAR 752
Query: 694 --------FFTSVVQGVLSS---LLGSLGARAGS 716
SVVQ +LS L + GA GS
Sbjct: 753 LGELPLGALQASVVQHLLSRTLLLAAAEGAAGGS 786
Score = 73.6 bits (179), Expect = 1e-12
Identities = 98/379 (25%), Positives = 133/379 (35%), Gaps = 33/379 (8%)
Query: 387 RPP---PTPNAEAPPPGPGQASSVAPSSTNVESSAEGAPPPGPAPPPATSHPRVIRISHQ 443
RPP P AP GP +S +A S + ++ APP PA P ++S +
Sbjct: 281 RPPQVTPPRKDAAPALGPLSSSPLATPSPSAALQSQ-APPTLPATPHSSSLTCQLATPLP 339
Query: 444 SVEPVVMMHMNIQDSGTQPGGVPSAPTGPLGPPG----HGQTLGQQVPGFPTAPTRVVIA 499
P ++Q + P PS T LG P H + T P + A
Sbjct: 340 LAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPA 399
Query: 500 RPTPP-QARPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLVGQLLMQPVLVAQGTPGMAP 558
PP QA PS P PP+S + NA ++ PV P P
Sbjct: 400 LALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPP 459
Query: 559 PPAPATASASAGTTNTATTAGPAPGGPAQPPPTPQ---PSMADLQFSQLLGNLLGPAGPG 615
AT + A + A P PA PP +P P A + L P P
Sbjct: 460 VSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKP--PP 517
Query: 616 AGGSGVASPTITVAMPGVPAFLQGMTDF-------LQATQTAPPPPPP---------PPP 659
+A+P + A+P PA G F + T PP PP PP
Sbjct: 518 QAPPALATPPLQ-ALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPS 576
Query: 660 PPPAPEQQTMPPPGSPSGGAGSPGGLGLESLSPEFFTSVVQGVLSSLLGSLGARAGSSES 719
PP +P Q P +P G +L+P + S+L G AG S S
Sbjct: 577 PPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGP--DLAGHSSS 634
Query: 720 IAAFIQRLSGSSNIFEPGA 738
+ + L G + E GA
Sbjct: 635 ATSTPEELRGYDSGPEGGA 653
Score = 58.2 bits (139), Expect = 4e-08
Identities = 106/457 (23%), Positives = 143/457 (31%), Gaps = 86/457 (18%)
Query: 197 PPQPPAVTPEPVALSSQTSEPVESEAPPREPMEAEEVEERAPAQNPELTPGP-------- 248
PP P TP P A + P++ APP P +P +P TP P
Sbjct: 384 PPLSPLATPPPQAPPALALPPLQ--APPSPPA--------SPPLSPLATPSPQAPNALAV 433
Query: 249 ----APAGPTPAPETNAPNHP--SPAEYVEVLQELQRLESRLQPFLQRYYEVLGAAATTD 302
AP P P+P AP P SP Q S P LQ + +
Sbjct: 434 HLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQ-----VPPSPPAS 488
Query: 303 YNNNHEGREEDQRLINLVGESLRLLG---NTFVALSDLRCNLACTPPRHLHVVRPMSHYT 359
+ Q L L+L AL+ +PP P S
Sbjct: 489 PPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSA 548
Query: 360 TPMVLQQAAIPIQINVGTTVTMTGNGTRPPPTPNAEAP--PPGPGQASSVAPSSTNVESS 417
+ + A P Q + PP +P +AP PP PG +SV S + +
Sbjct: 549 SLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSV--SGPRLTLA 606
Query: 418 AEGAPPPGPAPPPATSHPRVIRISHQSVEPVVMMHMNIQDSGTQPGGVPSAPTGPLGPPG 477
PPP P+ P+++ H S + DSG + G S P
Sbjct: 607 LAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPD------ 660
Query: 478 HGQTLGQQVPGFPTAPTRVVIARPTPPQARPSHPGG----PPVSGTLQGAGLGTNASLAQ 533
+ P A +R P PP A PG PP +G GL T
Sbjct: 661 -----AELAACHPAAWSR----GPAPPLAFRGAPGAPLPWPPATGPGSADGLCT------ 705
Query: 534 MVSGLVGQLLMQPVLVAQGTPGMAPPPAPATASASAGTTNTATTAGPAPGGPAQPPPTPQ 593
+ +G P P S GT+ AG G ++ P Q
Sbjct: 706 -------------IYETEGPESATPAPGALDPGPSPGTSGGKAAAGAGAGASSRSP--KQ 750
Query: 594 PSMADLQFSQLLGN----------LLGPAGPGAGGSG 620
+ +L L + LL A AGGSG
Sbjct: 751 ARLGELPLGALQASVVQHLLSRTLLLAAAEGAAGGSG 787
Score = 36.6 bits (83), Expect = 0.14
Identities = 46/197 (23%), Positives = 60/197 (30%), Gaps = 28/197 (14%)
Query: 501 PTPPQA-RPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLVGQLLMQPVLVAQGTPGMAPP 559
P PP + RP P P L AG LA+ G+ G + P AP
Sbjct: 27 PRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATI----------PESAPR 76
Query: 560 PAPATASASAGTTNTATTAGPAPGGPAQPPPTPQPSMADLQFSQLLGNLLGPAGPGAGGS 619
P T SA + N A+ PA G + PP S + P G G
Sbjct: 77 AGP-TRSAGTSSRNPASRP-PASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGL 134
Query: 620 GVASPTITVAMPGVPAFLQGMTDFLQATQTAPPPPPPPPP---------------PPPAP 664
+++ A + T+ P P P P P PAP
Sbjct: 135 RISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAP 194
Query: 665 EQQTMPPPGSPSGGAGS 681
+ PP P S
Sbjct: 195 SARPRPPTEGPRKSVSS 211
Score = 35.0 bits (79), Expect = 0.40
Identities = 77/325 (23%), Positives = 112/325 (34%), Gaps = 60/325 (18%)
Query: 422 PPPGPAPPPATSHPRVIRISHQSVEPVVMMHMNIQDSGTQPGGVPSAP-TGPLGPPGHGQ 480
PP P PPP PV + + + G P A G +G G
Sbjct: 29 PPGSPRPPP----------------PVTPAALRVLGAAGAVGRKPLAERAGGIG----GA 68
Query: 481 TLGQQVPGFPTAPTRVVIARPTPPQARPSHPG----GPPVSGTLQGAGLGTNASLAQMVS 536
T+ + P PTR P +RP G PP T G +
Sbjct: 69 TIPESAPR--AGPTRSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRP 126
Query: 537 GLVGQLLMQPVLVAQGTPGMAPPPAPATASASAGTTNTATTAGPAPGGPAQPPPTPQPSM 596
G +GQ ++ G A AP ++ SAG T+GP PG TP P+M
Sbjct: 127 GPLGQKGLRISAEETVARGKATE-APKRSALSAGARRD--TSGPTPG-------TPSPAM 176
Query: 597 ADLQFSQLLGNLLG---PA----------GPGAGGSGVASPTITVAMPGV---PAFLQGM 640
A + S+ G +G PA GP S + + T P P+ G+
Sbjct: 177 A--RRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGL 234
Query: 641 TDFLQATQTAPPPPPPPPPPPPAPEQQTMPPPGSPSGGAGSPGGLGLESLSPEFFTSVVQ 700
+ ++ P P + T P PS P GL++L P T +
Sbjct: 235 QRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPS----QPKPKGLQALRPPQVTPPRK 290
Query: 701 GVLSSLLGSLGARAGSSESIAAFIQ 725
+ LG L + ++ S +A +Q
Sbjct: 291 DA-APALGPLSSSPLATPSPSAALQ 314
Score = 30.8 bits (68), Expect = 7.6
Identities = 40/145 (27%), Positives = 52/145 (35%), Gaps = 11/145 (7%)
Query: 561 APATASASAGTTNTATTAGPAPGGPAQPPPTPQP-SMADLQFSQLLGNLLGPAGPGAGGS 619
A A A+A P P G +PPP P ++ L + +G P AGG
Sbjct: 8 AKAGAAARTPAARAPGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGR--KPLAERAGGI 65
Query: 620 GVASPTITVAMPGVPAFLQGMTDFLQATQTAPPPPPPPPPPPPAPEQQTMPPPGSPSG-- 677
G A TI + P T + A PP P + T P P S G
Sbjct: 66 GGA--TIPESAPRAGPTRSAGT---SSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRA 120
Query: 678 -GAGSPGGLGLESLSPEFFTSVVQG 701
G PG LG + L +V +G
Sbjct: 121 SGTTRPGPLGQKGLRISAEETVARG 145
>gi|47132519 Ras association and pleckstrin homology domains 1
isoform 1 [Homo sapiens]
Length = 1250
Score = 79.3 bits (194), Expect = 2e-14
Identities = 92/354 (25%), Positives = 120/354 (33%), Gaps = 65/354 (18%)
Query: 388 PPPTPNAEAPPPGPGQASSVAPSSTNVESSAEGAPPPGPAPPPATSHPRVIRISHQSVE- 446
PPP P PPP P PS + AP G A P + + R+ + S
Sbjct: 629 PPPPPPPPPPPPPPPPPPPPLPS--------QSAPSAGSAAPMFVKYSTITRLQNASQHS 680
Query: 447 --------PVVMMHMNIQDSG-TQPGGVPSAPTGPLGPPGHGQTLGQQVPGFPTAPTRVV 497
P VM +++ P GV P P PP G + Q P P AP+
Sbjct: 681 GALFKPPTPPVMQSQSVKPQILVPPNGVVPPPPPPPPPPTPGSAMAQLKPA-PCAPSLPQ 739
Query: 498 IARPTPPQ-----------ARPSHPGGPPVSGTLQGAGLGTNASLAQMVS--GLVGQLLM 544
+ P PP A P+ P PP+ A L A +V+ +
Sbjct: 740 FSAPPPPLKIHQVQHITQVAPPTPPPPPPIP-----APLPPQAPPKPLVTIPAPTSTKTV 794
Query: 545 QPVLVAQGTPGMAPPPAPATASASAGTTNTATTAGPAPGGPAQPP-----------PTPQ 593
PV V Q P PP P A + + P P P PP P P
Sbjct: 795 APV-VTQAAPPTPTPPVPPAKKQPAFPASYIPPSPPTPPVPVPPPTLPKQQSFCAKPPPS 853
Query: 594 P-SMADLQFSQLLGNLLGPAGPGAGGSGVASPTITVAMPGVPAFLQGMTDFLQATQTAPP 652
P S Q+ P P A S P P P ++ + ++ P
Sbjct: 854 PLSPVPSVVKQIASQFPPPPTPPAMESQPLKPVPANVAPQSPPAVKAKPKWQPSSIPVPS 913
Query: 653 P-------------PPPPPPPPPAPEQQTMPPPGSPS-GGAGSPGGLGLESLSP 692
P PPPPP P PAP PP SP+ +GSPG ++ SP
Sbjct: 914 PDFPPPPPESSLVFPPPPPSPVPAPPPPP-PPTASPTPDKSGSPGKKTSKTSSP 966
Score = 69.3 bits (168), Expect = 2e-11
Identities = 87/327 (26%), Positives = 113/327 (34%), Gaps = 48/327 (14%)
Query: 360 TPMVLQQAAIPIQINVGTTVTMTGNGTRPPPTPNAEAPPPGPGQASSVAPSSTNVESSAE 419
TP V+Q ++ QI V NG PPP P PPP PG A + + S +
Sbjct: 688 TPPVMQSQSVKPQILVPP------NGVVPPPPP--PPPPPTPGSAMAQLKPAPCAPSLPQ 739
Query: 420 GAPPPGPAPPPATSHPRVIRISHQSVEPVVMMHMNIQDSGTQPGGVPSAPTGPLGPPGHG 479
+ PP P H + +++ + P P +P AP P PP
Sbjct: 740 FSAPPPPLKIHQVQH--ITQVAPPTPPP--------------PPPIP-APLPPQAPPKPL 782
Query: 480 QTLGQQVPGFPTAPTRVVIARPTPPQARPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLV 539
T+ APT P QA P P P Q A AS
Sbjct: 783 VTI--------PAPTSTKTVAPVVTQAAPPTPTPPVPPAKKQPA---FPASYIPPSPPTP 831
Query: 540 GQLLMQPVLVAQGTPGMAPPPAPATASASAGTTNTATTAGPAPGGPAQPPPTPQPSMADL 599
+ P L Q + PPP+P + S A P PPPTP P+M
Sbjct: 832 PVPVPPPTLPKQQSFCAKPPPSPLSPVPSV----VKQIASQFP-----PPPTP-PAMESQ 881
Query: 600 QFSQLLGNLLGPAGPGAGGSGVASP-TITVAMPGVPAFLQGMTDFLQATQTAPPPPPPPP 658
+ N+ + P P +I V P P + +P P PPPP
Sbjct: 882 PLKPVPANVAPQSPPAVKAKPKWQPSSIPVPSPDFPPPPPESSLVFPPPPPSPVPAPPPP 941
Query: 659 PPPPA-PEQQTMPPPGSPSGGAGSPGG 684
PPP A P PG + SPGG
Sbjct: 942 PPPTASPTPDKSGSPGKKTSKTSSPGG 968
Score = 62.0 bits (149), Expect = 3e-09
Identities = 126/543 (23%), Positives = 166/543 (30%), Gaps = 100/543 (18%)
Query: 181 SRMECRGGPQPQHSQP-PPQPPAVTPEPVALSSQTSEPVESEAPPREPMEAEEVEERAPA 239
+RME P P PQP VTP +SQ S P+ PP P
Sbjct: 593 ARMESMNRPYTSLVPPLSPQPKIVTPYT---ASQPSPPLPPPPPPPPP------------ 637
Query: 240 QNPELTPGPAPAGPTPAPETNAPNHPSPAEYVEVLQELQRLESRLQPFLQRYYEVLGAAA 299
P P P P P P +AP+ S A + RL++ Q + L
Sbjct: 638 -----PPPPPPPPPPPLPSQSAPSAGSAAPMFVKYSTITRLQNASQ-----HSGALFKPP 687
Query: 300 TTDYNNNHEGREEDQRLINLV-------------GESLRLLGNTFVALSDLRCNLACTPP 346
T + + + N V G ++ L A S L A PP
Sbjct: 688 TPPVMQSQSVKPQILVPPNGVVPPPPPPPPPPTPGSAMAQLKPAPCAPS-LPQFSAPPPP 746
Query: 347 RHLHVVRPMSHYTTPMVLQQAAIPIQINVGTTVTMTGNGTRPPPTPNAEAPPPGPGQASS 406
+H V+ ++ P IP + P P P P +
Sbjct: 747 LKIHQVQHITQVAPPTPPPPPPIPAPL-------------PPQAPPKPLVTIPAPTSTKT 793
Query: 407 VAPSSTNVESSAEGAPP-PGPAPPPATSHPRVIRISHQSVEPVVMMHMNIQDSGTQPGGV 465
VAP T + APP P P PPA P P + + Q
Sbjct: 794 VAPVVT------QAAPPTPTPPVPPAKKQPAFPASYIPPSPPTPPVPVPPPTLPKQQSFC 847
Query: 466 PSAPTGPLGP-PGHGQTLGQQVPGFPTAPT-RVVIARPTPPQARPSHPGGPPVSGTLQGA 523
P PL P P + + Q P PT P +P P P P P V +
Sbjct: 848 AKPPPSPLSPVPSVVKQIASQFPPPPTPPAMESQPLKPVPANVAPQSP--PAVKAKPKWQ 905
Query: 524 GLGTNASLAQMVSGLVGQLLMQPVLVAQGTPGMAPPPAPATASAS---AGTTNTATTAGP 580
L+ P P PPP P TAS + +G+ T+
Sbjct: 906 PSSIPVPSPDFPPPPPESSLVFPPPPPSPVPA-PPPPPPPTASPTPDKSGSPGKKTSKTS 964
Query: 581 APGGPAQPPPTPQ-------------PSMADLQFSQLLGNLLGPAGPGAGGSGVASPTIT 627
+PGG +PPPTPQ P L+ PA G+ P
Sbjct: 965 SPGG-KKPPPTPQRNSSIKSSSGAEHPEPKRPSVDSLVSKFTPPAESGSPSKETLPPPAA 1023
Query: 628 VAMPG--------VPAFLQGMTDFLQATQTA----------PPPPPPPPPPPPAPEQQTM 669
PG +P LQ +A + P PP PPP PE +
Sbjct: 1024 PPKPGKLNLSGVNLPGVLQQGCVSAKAPVLSGRGKDSVVEFPSPPSDSDFPPPPPETELP 1083
Query: 670 PPP 672
PP
Sbjct: 1084 LPP 1086
Score = 57.4 bits (137), Expect = 8e-08
Identities = 87/355 (24%), Positives = 110/355 (30%), Gaps = 37/355 (10%)
Query: 344 TPPRHLHVVRPMSHYTTPMVLQQAAIPIQIN-VGTTVTMTGNGTRPPPTPNAEA------ 396
TPP + P+ P L P V VT T PP P A+
Sbjct: 762 TPPPPPPIPAPLPPQAPPKPLVTIPAPTSTKTVAPVVTQAAPPTPTPPVPPAKKQPAFPA 821
Query: 397 ---PPPGPGQASSVAPSSTNVESSAEGAPPPGPAPPPATSHPRVIR-ISHQSVEPVVMMH 452
PP P V P + + S PPP P P P V++ I+ Q P
Sbjct: 822 SYIPPSPPTPPVPVPPPTLPKQQSFCAKPPPSPLSPV----PSVVKQIASQFPPPPTPPA 877
Query: 453 MNIQDSGTQPGGV--PSAPTGPLGPPGHGQTLGQQVPGFPTAPTRVVIARPTPPQA---R 507
M Q P V S P P ++ P FP P + P PP +
Sbjct: 878 MESQPLKPVPANVAPQSPPAVKAKPKWQPSSIPVPSPDFPPPPPESSLVFPPPPPSPVPA 937
Query: 508 PSHPGGPPVSGTLQGAGL-GTNASLAQMVSGLVGQLLMQPVLVAQGTPGMAPPPAPATAS 566
P P P S T +G G S G Q + + G P +
Sbjct: 938 PPPPPPPTASPTPDKSGSPGKKTSKTSSPGGKKPPPTPQRNSSIKSSSGAEHPEPKRPSV 997
Query: 567 ASAGTTNTATTAGPAPGGPAQPPPTPQPSMADLQFSQLLGNLLGPAGPGAGGSGVASPTI 626
S + T +P PPP P L NL G PG G S
Sbjct: 998 DSLVSKFTPPAESGSPSKETLPPPAAPPKPGKL-------NLSGVNLPGVLQQGCVSAKA 1050
Query: 627 TVAMPGVPAFLQGMTDFLQATQTAPPPPPPPPPPPPAPEQQTMPPPGSPSGGAGS 681
V L G +PP PPPPP E +PP P+ +G+
Sbjct: 1051 PV--------LSGRGKDSVVEFPSPPSDSDFPPPPPETE-LPLPPIEIPAVFSGN 1096
Score = 53.5 bits (127), Expect = 1e-06
Identities = 49/171 (28%), Positives = 59/171 (34%), Gaps = 55/171 (32%)
Query: 530 SLAQMVSGLVGQLLMQPVLV-----AQGTPGMAPPPAPATASASAGTTNTATTAGPAPGG 584
S+ + + LV L QP +V +Q +P + PPP P P P
Sbjct: 597 SMNRPYTSLVPPLSPQPKIVTPYTASQPSPPLPPPPPPP----------------PPPPP 640
Query: 585 PAQPPPTPQPSMAD-------------------LQFSQLLGNLLGPAGPGAGGSGVASPT 625
P PPP P PS + SQ G L P P S P
Sbjct: 641 PPPPPPPPLPSQSAPSAGSAAPMFVKYSTITRLQNASQHSGALFKPPTPPVMQSQSVKPQ 700
Query: 626 ITVAMPGVPAFLQGMTDFLQATQTAPPPPPPPPPPPPAPEQQTMPPPGSPS 676
I V GV PPPPPPPPP P + Q P P +PS
Sbjct: 701 ILVPPNGV---------------VPPPPPPPPPPTPGSAMAQLKPAPCAPS 736
Score = 51.2 bits (121), Expect = 5e-06
Identities = 22/38 (57%), Positives = 24/38 (63%)
Query: 646 ATQTAPPPPPPPPPPPPAPEQQTMPPPGSPSGGAGSPG 683
A+Q +PP PPPPPPPPP P PPP PS A S G
Sbjct: 621 ASQPSPPLPPPPPPPPPPPPPPPPPPPPLPSQSAPSAG 658
Score = 43.9 bits (102), Expect = 9e-04
Identities = 83/340 (24%), Positives = 110/340 (32%), Gaps = 84/340 (24%)
Query: 388 PPPTPNAEAPPPGPGQAS-----SVAPSSTNVESSAEGAPPPGPAPPPATS--------H 434
PPP+P PPP P AS S +P ++S+ G P P P +S H
Sbjct: 930 PPPSPVPAPPPPPPPTASPTPDKSGSPGKKTSKTSSPGGKKPPPTPQRNSSIKSSSGAEH 989
Query: 435 PRVIRISHQSVEPVVMMHMNIQDSGTQPGGVPSAPTGPLGPPGHGQTLGQQVPGF----- 489
P R SV+ +V +SG+ P P PG G +PG
Sbjct: 990 PEPKR---PSVDSLVSKFTPPAESGSPSKETLPPPAAP-PKPGKLNLSGVNLPGVLQQGC 1045
Query: 490 -----PTAPTR---VVIARPTPPQARPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLVGQ 541
P R V+ P+PP P PP L + A + S V
Sbjct: 1046 VSAKAPVLSGRGKDSVVEFPSPPSDSDFPP--PPPETELPLPPIEIPAVFSGNTSPKVAV 1103
Query: 542 LLMQPVLVAQGTPGMAPPPA-----PATASASAGTTNTATTAGPAPGGPAQPPP--TPQP 594
+ QP ++ + APPP +T A + T A P P P + QP
Sbjct: 1104 VNPQPQQWSKMSVKKAPPPTRPKRNDSTRLTQAEISEQPTMATVVPQVPTSPKSSLSVQP 1163
Query: 595 S-MADLQFSQLLGNLLGPAGPGAGGSGVASPTITVAMPGVPAFLQGMTDFLQATQTAPPP 653
+ADL L + G + A PT T+ A PP
Sbjct: 1164 GFLADLN-RTLQRKSITRHGSLSSRMSRAEPTATM------------------DDMALPP 1204
Query: 654 PPP-------------------------PPPPPPAPEQQT 668
PPP PPP PP +Q T
Sbjct: 1205 PPPELLSDQQKAGYGGSHISGYATLRRGPPPAPPKRDQNT 1244
Score = 34.3 bits (77), Expect = 0.68
Identities = 43/173 (24%), Positives = 70/173 (40%), Gaps = 26/173 (15%)
Query: 926 GPDAILRYVRRVGD----PPQP---LPEEPMEVQGAERASPEPQRENASPAPGTTAEEAM 978
G D+++ + D PP P LP P+E+ + P+ +P P ++ ++
Sbjct: 1057 GKDSVVEFPSPPSDSDFPPPPPETELPLPPIEIPAVFSGNTSPKVAVVNPQPQQWSKMSV 1116
Query: 979 SRGPPPA-PEGGSRDEQDGASAETEPWAAAVPPEWVPIIQQDIQSQRKVKPQPPLSDAYL 1037
+ PPP P+ A +P A V VP + +S V+P +L
Sbjct: 1117 KKAPPPTRPKRNDSTRLTQAEISEQPTMATV----VPQVPTSPKSSLSVQP------GFL 1166
Query: 1038 SGM-PAKRRKTMQGEGPQLLLSEAVSRAAKAAG----ARPLTSPESLSRDLEA 1085
+ + +RK++ G LS +SRA A A P PE LS +A
Sbjct: 1167 ADLNRTLQRKSITRHGS---LSSRMSRAEPTATMDDMALPPPPPELLSDQQKA 1216
Score = 33.1 bits (74), Expect = 1.5
Identities = 16/41 (39%), Positives = 17/41 (41%)
Query: 654 PPPPPPPPPAPEQQTMPPPGSPSGGAGSPGGLGLESLSPEF 694
P PP PPPP P PPP P S S +P F
Sbjct: 624 PSPPLPPPPPPPPPPPPPPPPPPPPLPSQSAPSAGSAAPMF 664
Score = 32.3 bits (72), Expect = 2.6
Identities = 37/169 (21%), Positives = 64/169 (37%), Gaps = 21/169 (12%)
Query: 940 PPQPLPEEPMEVQGAERASPEPQRENASPAPGTTAEEAMSRGPPPAPEG--GSRDEQDGA 997
PP P P P+ +A P+P +P T +++ PP P +Q
Sbjct: 760 PPTPPPPPPIPAPLPPQAPPKPLVTIPAPTSTKTVAPVVTQAAPPTPTPPVPPAKKQPAF 819
Query: 998 SAETEPWAAAVPPEWVPIIQQDIQSQRKVKPQPPLSDAYLSGMPAKRRK----------- 1046
A P + PP VP+ + Q+ +PP S LS +P+ ++
Sbjct: 820 PASYIPPSPPTPP--VPVPPPTLPKQQSFCAKPPPSP--LSPVPSVVKQIASQFPPPPTP 875
Query: 1047 -TMQGEGPQLLLSEAVSRAAKAAGARPLTSPESL---SRDLEAPEVQES 1091
M+ + + + + ++ A A+P P S+ S D P + S
Sbjct: 876 PAMESQPLKPVPANVAPQSPPAVKAKPKWQPSSIPVPSPDFPPPPPESS 924
Score = 31.6 bits (70), Expect = 4.4
Identities = 21/67 (31%), Positives = 28/67 (41%), Gaps = 8/67 (11%)
Query: 940 PPQPLPEEPMEVQGAERASPEPQRENASPAPGTTAEEAMSRG---PPPAPEGGSRDEQDG 996
PP P+P P ASP P + S +PG + S G PPP P+ S +
Sbjct: 931 PPSPVPAPPPPPPPT--ASPTPDK---SGSPGKKTSKTSSPGGKKPPPTPQRNSSIKSSS 985
Query: 997 ASAETEP 1003
+ EP
Sbjct: 986 GAEHPEP 992
>gi|122937496 WAS/WASL interacting protein family, member 3 [Homo
sapiens]
Length = 483
Score = 79.3 bits (194), Expect = 2e-14
Identities = 93/306 (30%), Positives = 111/306 (36%), Gaps = 78/306 (25%)
Query: 388 PPPTPNAEAPPPGPGQASSVAPSSTNVESSAEGAPPPGPAPPPA-----TSHPRVIRISH 442
PPP P APPP P S P ST+ SS A P G + A T +V +I+
Sbjct: 12 PPPPPPLGAPPPPP---PSAPPVSTDT-SSLRRADPKGRSALLADIQQGTRLRKVTQIND 67
Query: 443 QSVEPVVMMHMNIQDSGTQPGGVPSAPT-GPLGPPGHGQTLGQQVPGFPTAPTRVVIARP 501
+S + GT G SA T G PP G GFP + RP
Sbjct: 68 RSAPQIE------SSKGTNKEGGGSANTRGASTPPTLGDLFAG---GFP-------VLRP 111
Query: 502 TPPQARPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLVGQLLMQPVLVAQGTPGMAPPPA 561
G V+G G G G+ A P L + G PPA
Sbjct: 112 A---------GQRDVAGGKTGQGPGSRAP--------------SPRLPNKTISGPLIPPA 148
Query: 562 PATASASAGTTNTATTAGPAPGGPAQPPPTPQPSMADL-----QFSQLLGNLLGPAGPGA 616
++ A TA P P PA PPPTP P L S + L+ P GP
Sbjct: 149 SPRLGNTSEAHGAARTAPPRPNVPAPPPPTPPPPPPPLPPPLPSSSPIKTPLVSPPGPLT 208
Query: 617 GGSGVASPTITVAMPGVPAFLQGMTDFLQATQTAPPPPPPPPPPPPAPEQQTMPPPGSPS 676
G+ + V P VP APPPPPPPPPP P P +PP S
Sbjct: 209 KGN------LPVVAPPVPC--------------APPPPPPPPPPTPPP----LPPASVLS 244
Query: 677 GGAGSP 682
A P
Sbjct: 245 DKAVKP 250
Score = 61.2 bits (147), Expect = 5e-09
Identities = 83/320 (25%), Positives = 97/320 (30%), Gaps = 65/320 (20%)
Query: 370 PIQINVGTTVTMTGNGTRPPPTPNAEAPPPGPGQASSVAPSSTNVESSAEGAPPPGPAPP 429
P +G T G PP PN APPP PPP P PP
Sbjct: 147 PASPRLGNTSEAHGAARTAPPRPNVPAPPP------------------PTPPPPPPPLPP 188
Query: 430 PATSHPRVIRISHQSVEPVVMMHMNIQDSGTQPGGVPSAPTGPLGPPGHGQTLGQQVPGF 489
P S ++ ++ G P P P P PP +P
Sbjct: 189 PLP--------SSSPIKTPLVSPPGPLTKGNLPVVAPPVPCAPPPPPPPPPPTPPPLP-- 238
Query: 490 PTAPTRVVIARPTPPQARPSH-PGGPPVSGTLQGAGL-GTNASLAQMVSGLVGQLLMQPV 547
P V+ + PQ P H P PP L G G A A P
Sbjct: 239 ---PASVLSDKAVKPQLAPLHLPPIPPPLPLLPPCGYPGLKAEPA------------SPA 283
Query: 548 LVAQGTPGMAPPPAPATASASAGTTNTATTAGPAPG---GPAQPPPTPQPSMADLQFSQL 604
AQ P PPP P AS S + A P PG PPP P S + Q
Sbjct: 284 QDAQEPPA-PPPPLPPYASCS---PRASLPAPPLPGVNSSSETPPPLPPKSPSFQAPPQK 339
Query: 605 LGNLLGPAGPGAGGSGVASPTITVAMPGVPAFLQGMTDFLQATQTAPPPPPPPPPPPPAP 664
G PA P GS P + G P G + PPP PP P
Sbjct: 340 AGAQALPAPPAPPGS---QPFLQKKRHGRPGAGGGKLN----------PPPAPPARSPTT 386
Query: 665 EQQTMPPPGSPSGGAGSPGG 684
E + + PGG
Sbjct: 387 ELSSKSQQATAWTPTQQPGG 406
Score = 47.4 bits (111), Expect = 8e-05
Identities = 58/215 (26%), Positives = 79/215 (36%), Gaps = 41/215 (19%)
Query: 487 PGFPTAPTRVVIARPTPPQARPSHPGGPPVS---GTLQGAG-LGTNASLAQMVSGLVGQL 542
P P P + P PP P PPVS +L+ A G +A LA + G
Sbjct: 7 PPPPLPPPPPPLGAPPPPP-----PSAPPVSTDTSSLRRADPKGRSALLADIQQGT---- 57
Query: 543 LMQPVLVAQGTPGMAPPPAPATASASAGTTNTATTAGPAP------GGPAQPPPTPQPSM 596
++ V + T G+ NT + P GG P Q +
Sbjct: 58 RLRKVTQINDRSAPQIESSKGTNKEGGGSANTRGASTPPTLGDLFAGGFPVLRPAGQRDV 117
Query: 597 ADLQFSQLLGNLLGPAGPGAGGSGVASPTITVAMPGVPAF---LQGMTDFLQATQTAPP- 652
A + Q GPG+ P T++ P +P L ++ A +TAPP
Sbjct: 118 AGGKTGQ---------GPGSRAPSPRLPNKTISGPLIPPASPRLGNTSEAHGAARTAPPR 168
Query: 653 -----PPPPPPPPPPAPEQQTMPPPGSPSGGAGSP 682
PPPP PPPPP P +PPP S +P
Sbjct: 169 PNVPAPPPPTPPPPPPP----LPPPLPSSSPIKTP 199
Score = 41.2 bits (95), Expect = 0.006
Identities = 19/43 (44%), Positives = 20/43 (46%)
Query: 651 PPPPPPPPPPPPAPEQQTMPPPGSPSGGAGSPGGLGLESLSPE 693
P PPPPPPP PP P PPP PS S L P+
Sbjct: 2 PVPPPPPPPLPPPPPPLGAPPPPPPSAPPVSTDTSSLRRADPK 44
Score = 39.7 bits (91), Expect = 0.016
Identities = 47/189 (24%), Positives = 67/189 (35%), Gaps = 24/189 (12%)
Query: 80 KVIHLVERAPPQTHLPSGASSGTGSASATHGGGSPPGTRGPGASVHDRNANSYVMVGTFN 139
KV + +R+ PQ G + G ++ T G +PP T G + G F
Sbjct: 61 KVTQINDRSAPQIESSKGTNKEGGGSANTRGASTPP-TLGD------------LFAGGFP 107
Query: 140 LPSDGSAVDVHINME-QAPIQSEPRVRL---VMAQHMIRDIQTLLSRM-ECRGG-----P 189
+ DV Q P P RL ++ +I L E G P
Sbjct: 108 VLRPAGQRDVAGGKTGQGPGSRAPSPRLPNKTISGPLIPPASPRLGNTSEAHGAARTAPP 167
Query: 190 QPQHSQPPPQPPAVTPEPVALSSQTSEPVESE-APPREPMEAEEVEERAPAQNPELTPGP 248
+P PPP P P P+ +S P+++ P P+ + AP P P
Sbjct: 168 RPNVPAPPPPTPPPPPPPLPPPLPSSSPIKTPLVSPPGPLTKGNLPVVAPPVPCAPPPPP 227
Query: 249 APAGPTPAP 257
P PTP P
Sbjct: 228 PPPPPTPPP 236
Score = 38.1 bits (87), Expect = 0.047
Identities = 27/97 (27%), Positives = 36/97 (37%), Gaps = 18/97 (18%)
Query: 189 PQPQHSQPPPQPPAVTPEPVALSSQTSE-------------PVESEAPPREP-----MEA 230
P P PPP PP TP P+ +S S+ P+ P P ++A
Sbjct: 218 PVPCAPPPPPPPPPPTPPPLPPASVLSDKAVKPQLAPLHLPPIPPPLPLLPPCGYPGLKA 277
Query: 231 EEVEERAPAQNPELTPGPAPAGPTPAPETNAPNHPSP 267
E AQ P P P P + +P + P P P
Sbjct: 278 EPASPAQDAQEPPAPPPPLPPYASCSPRASLPAPPLP 314
>gi|42544125 splicing factor 1 isoform 2 [Homo sapiens]
Length = 638
Score = 79.0 bits (193), Expect = 2e-14
Identities = 85/311 (27%), Positives = 106/311 (34%), Gaps = 63/311 (20%)
Query: 395 EAPPPGPGQASSVAPSSTNVESSAEGAPPPGPAPPPAT-----SHPRVIRISHQSVEPVV 449
EAP P S+ P++T + S+ A P PPP+ S P + P
Sbjct: 322 EAPVPA-SVGSTSGPATTPLASAPRPAAPANNPPPPSLMSTTQSRPPWMNSGPSESRPYH 380
Query: 450 MMHMNIQDSGTQPGGVPSAPTG-----PLGPPGHGQTLGQQVPGFPTAPTRVVIARPTPP 504
MH G PGG P P GHG Q P P P + P PP
Sbjct: 381 GMH------GGGPGGPGGGPHSFPHPLPSLTGGHGGHPMQHNPNGPPPPW---MQPPPPP 431
Query: 505 QAR----PSHPGGPPVSGTLQGAGLGTNASLAQMVSGLVGQLLMQPVLVAQGTPGMAPPP 560
+ P H G PP+ L +G+ G++ M GM PPP
Sbjct: 432 MNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPM----------GMMPPP 481
Query: 561 APATASASAGTTNTATTAGPAPGGPA--------QPPPTPQPSMA-----DLQFSQLLGN 607
P + P P GP QPPP P PS + L + Q
Sbjct: 482 PPPPSGQPP----------PPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNTTT 531
Query: 608 LLGPAGPGAGGSGVASPTITVAMPGVPAFLQGMTDFLQATQTAPPP-----PPPPPPPPP 662
AG G+ A PG P +QG + PP PPPPPPPPP
Sbjct: 532 TTTSAGTGSIPPWQQQQAAAAASPGAPQ-MQGNPTMVPLPPGVQPPLPPGAPPPPPPPPP 590
Query: 663 APEQQTMPPPG 673
+PP G
Sbjct: 591 GSAGMMIPPRG 601
Score = 54.7 bits (130), Expect = 5e-07
Identities = 70/261 (26%), Positives = 85/261 (32%), Gaps = 62/261 (23%)
Query: 466 PSAPTGPLGPPGHGQTLGQQVPGFPTAPTRVVIARPTPPQARPSH------PGGPPVSGT 519
P+AP PP T + P + P+ ++RP H PGGP
Sbjct: 346 PAAPANNPPPPSLMSTTQSRPPWMNSGPS----------ESRPYHGMHGGGPGGP----- 390
Query: 520 LQGAGLGTNASLAQMVSGLVGQLLMQPVLVAQGTPGMAPPPAPATASASAGTTNTATTAG 579
G G + ++G G MQ P M PPP P G
Sbjct: 391 --GGGPHSFPHPLPSLTGGHGGHPMQHNPNGPPPPWMQPPPPPMNQ-------------G 435
Query: 580 PAPGGPAQPPPTPQPSMADLQFSQLLGNLLGPAGPGA----GGSGVASPTITVAMPGVPA 635
P P G PPP Q LG+ P G G G G+ P MP P
Sbjct: 436 PHPPGHHGPPP----------MDQYLGST--PVGSGVYRLHQGKGMMPPPPMGMMPPPPP 483
Query: 636 FLQGMTDFLQATQTAPPPPPPPPPPPPAPEQQTMPPPGSPSGGAGSPGGLGLESLSPEFF 695
G PPPPP P PP +QQ PPP PS S L + +
Sbjct: 484 PPSGQ----------PPPPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNTTTTT 533
Query: 696 TSVVQGVLSSLLGSLGARAGS 716
TS G + A A S
Sbjct: 534 TSAGTGSIPPWQQQQAAAAAS 554
Score = 46.2 bits (108), Expect = 2e-04
Identities = 49/180 (27%), Positives = 61/180 (33%), Gaps = 24/180 (13%)
Query: 345 PPRHLHVVRPMSHYTTPMVLQQAAIPIQINVGTTVTMTGNGTRPPPTPNAEAPPPGPGQA 404
PP + P H PM + P+ G G G PPP PPP P
Sbjct: 430 PPMNQGPHPPGHHGPPPMDQYLGSTPV--GSGVYRLHQGKGMMPPPPMGMMPPPPPPPSG 487
Query: 405 SSVAPSSTNVESSAEGAPPPGPAPPPATSHPRVIRISHQSVEPVVMMHMNIQDSGTQPGG 464
P S + + P P PPP++S + Q Q++ T
Sbjct: 488 QPPPPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQ------------QNTTTT--- 532
Query: 465 VPSAPTGPLGPPGHGQTLGQQVPGFPTA---PTRVV----IARPTPPQARPSHPGGPPVS 517
SA TG + P Q PG P PT V + P PP A P P PP S
Sbjct: 533 TTSAGTGSIPPWQQQQAAAAASPGAPQMQGNPTMVPLPPGVQPPLPPGAPPPPPPPPPGS 592
Score = 35.0 bits (79), Expect = 0.40
Identities = 26/103 (25%), Positives = 36/103 (34%), Gaps = 10/103 (9%)
Query: 585 PAQPPPTPQPSMADLQFSQL---LGNLLGPAGPGAGGSGVASPTITVAMPGVPAFLQGMT 641
P P + D ++ L LG PA G+ +P + P PA
Sbjct: 297 PGDPQSAQDKARMDKEYLSLMAELGEAPVPASVGSTSGPATTPLASAPRPAAPANNPPPP 356
Query: 642 DFLQATQTAPPPPPPPPPPPPAPEQQTMPPPGSPSGGAGSPGG 684
+ TQ+ PP P ++ P G GG G PGG
Sbjct: 357 SLMSTTQSRPPWMNSGP-------SESRPYHGMHGGGPGGPGG 392
Score = 31.6 bits (70), Expect = 4.4
Identities = 25/93 (26%), Positives = 31/93 (33%), Gaps = 13/93 (13%)
Query: 188 GPQPQHSQPPPQPPAVTPEPVALSSQTSEPVE-------------SEAPPREPMEAEEVE 234
GP P Q QPP P +++S T P + S P ++ A
Sbjct: 495 GPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNTTTTTTSAGTGSIPPWQQQQAAAAAS 554
Query: 235 ERAPAQNPELTPGPAPAGPTPAPETNAPNHPSP 267
AP T P P G P AP P P
Sbjct: 555 PGAPQMQGNPTMVPLPPGVQPPLPPGAPPPPPP 587
>gi|42544130 splicing factor 1 isoform 1 [Homo sapiens]
Length = 639
Score = 79.0 bits (193), Expect = 2e-14
Identities = 95/341 (27%), Positives = 118/341 (34%), Gaps = 80/341 (23%)
Query: 395 EAPPPGPGQASSVAPSSTNVESSAEGAPPPGPAPPPAT-----SHPRVIRISHQSVEPVV 449
EAP P S+ P++T + S+ A P PPP+ S P + P
Sbjct: 322 EAPVPA-SVGSTSGPATTPLASAPRPAAPANNPPPPSLMSTTQSRPPWMNSGPSESRPYH 380
Query: 450 MMHMNIQDSGTQPGGVPSAPTG-----PLGPPGHGQTLGQQVPGFPTAPTRVVIARPTPP 504
MH G PGG P P GHG Q P P P + P PP
Sbjct: 381 GMH------GGGPGGPGGGPHSFPHPLPSLTGGHGGHPMQHNPNGPPPPW---MQPPPPP 431
Query: 505 QAR----PSHPGGPPVSGTLQGAGLGTNASLAQMVSGLVGQLLMQPVLVAQGTPGMAPPP 560
+ P H G PP+ L +G+ G++ M GM PPP
Sbjct: 432 MNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPM----------GMMPPP 481
Query: 561 APATASASAGTTNTATTAGPAPGGPA--------QPPPTPQPSMA-----DLQFSQLLGN 607
P + P P GP QPPP P PS + L + Q
Sbjct: 482 PPPPSGQPP----------PPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNTTT 531
Query: 608 LLGPAGPGAGGSGVASPTITVAMPGVPAFLQG---MTDFLQATQT-----APPPPPPPPP 659
AG G+ A PG P +QG M Q APPPPPPPPP
Sbjct: 532 TTTSAGTGSIPPWQQQQAAAAASPGAPQ-MQGNPTMVPLPPGVQPPLPPGAPPPPPPPPP 590
Query: 660 --------PPPAPEQQTMPPPGSPSGGAGSPGGLGLESLSP 692
PPP P PPP PS + G+G+ + P
Sbjct: 591 GSAGMMYAPPPPP-----PPPMDPSNFV-TMMGMGVAGMPP 625
Score = 55.1 bits (131), Expect = 4e-07
Identities = 67/258 (25%), Positives = 82/258 (31%), Gaps = 58/258 (22%)
Query: 345 PPRHLHVVRPMSHYTTPMVLQQAAIPIQINVGTTVTMTGNGTRPPPTPNAEAPPPGPGQA 404
PP + P H PM + P+ G G G PPP PPP P
Sbjct: 430 PPMNQGPHPPGHHGPPPMDQYLGSTPV--GSGVYRLHQGKGMMPPPPMGMMPPPPPPPSG 487
Query: 405 SSVAPSSTNVESSAEGAPPPGPAPPPATSHPRVIRISHQSVEPVVMMHMNIQDSGTQPGG 464
P S + + P P PPP++S + Q Q++ T
Sbjct: 488 QPPPPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQ------------QNTTTT--- 532
Query: 465 VPSAPTGPLGPPGHGQTLGQQVPGFPTA---PTRVV----IARPTPPQARPSHPGGPPVS 517
SA TG + P Q PG P PT V + P PP A P P PP
Sbjct: 533 TTSAGTGSIPPWQQQQAAAAASPGAPQMQGNPTMVPLPPGVQPPLPPGAPPPPPPPPP-- 590
Query: 518 GTLQGAGLGTNASLAQMVSGLVGQLLMQPVLVAQGTPGMAPPPAPATASASAGTTNTATT 577
G G + P PPP P ++ T
Sbjct: 591 -------------------GSAGMMYAPP-----------PPPPPPMDPSNFVTMMGMGV 620
Query: 578 AGPAPGG--PAQPPPTPQ 593
AG P G PA PPP PQ
Sbjct: 621 AGMPPFGMPPAPPPPPPQ 638
Score = 54.7 bits (130), Expect = 5e-07
Identities = 70/261 (26%), Positives = 85/261 (32%), Gaps = 62/261 (23%)
Query: 466 PSAPTGPLGPPGHGQTLGQQVPGFPTAPTRVVIARPTPPQARPSH------PGGPPVSGT 519
P+AP PP T + P + P+ ++RP H PGGP
Sbjct: 346 PAAPANNPPPPSLMSTTQSRPPWMNSGPS----------ESRPYHGMHGGGPGGP----- 390
Query: 520 LQGAGLGTNASLAQMVSGLVGQLLMQPVLVAQGTPGMAPPPAPATASASAGTTNTATTAG 579
G G + ++G G MQ P M PPP P G
Sbjct: 391 --GGGPHSFPHPLPSLTGGHGGHPMQHNPNGPPPPWMQPPPPPMNQ-------------G 435
Query: 580 PAPGGPAQPPPTPQPSMADLQFSQLLGNLLGPAGPGA----GGSGVASPTITVAMPGVPA 635
P P G PPP Q LG+ P G G G G+ P MP P
Sbjct: 436 PHPPGHHGPPP----------MDQYLGST--PVGSGVYRLHQGKGMMPPPPMGMMPPPPP 483
Query: 636 FLQGMTDFLQATQTAPPPPPPPPPPPPAPEQQTMPPPGSPSGGAGSPGGLGLESLSPEFF 695
G PPPPP P PP +QQ PPP PS S L + +
Sbjct: 484 PPSGQ----------PPPPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNTTTTT 533
Query: 696 TSVVQGVLSSLLGSLGARAGS 716
TS G + A A S
Sbjct: 534 TSAGTGSIPPWQQQQAAAAAS 554
Score = 35.0 bits (79), Expect = 0.40
Identities = 26/103 (25%), Positives = 36/103 (34%), Gaps = 10/103 (9%)
Query: 585 PAQPPPTPQPSMADLQFSQL---LGNLLGPAGPGAGGSGVASPTITVAMPGVPAFLQGMT 641
P P + D ++ L LG PA G+ +P + P PA
Sbjct: 297 PGDPQSAQDKARMDKEYLSLMAELGEAPVPASVGSTSGPATTPLASAPRPAAPANNPPPP 356
Query: 642 DFLQATQTAPPPPPPPPPPPPAPEQQTMPPPGSPSGGAGSPGG 684
+ TQ+ PP P ++ P G GG G PGG
Sbjct: 357 SLMSTTQSRPPWMNSGP-------SESRPYHGMHGGGPGGPGG 392
Score = 31.6 bits (70), Expect = 4.4
Identities = 25/93 (26%), Positives = 31/93 (33%), Gaps = 13/93 (13%)
Query: 188 GPQPQHSQPPPQPPAVTPEPVALSSQTSEPVE-------------SEAPPREPMEAEEVE 234
GP P Q QPP P +++S T P + S P ++ A
Sbjct: 495 GPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNTTTTTTSAGTGSIPPWQQQQAAAAAS 554
Query: 235 ERAPAQNPELTPGPAPAGPTPAPETNAPNHPSP 267
AP T P P G P AP P P
Sbjct: 555 PGAPQMQGNPTMVPLPPGVQPPLPPGAPPPPPP 587
Score = 31.2 bits (69), Expect = 5.8
Identities = 19/67 (28%), Positives = 22/67 (32%)
Query: 189 PQPQHSQPPPQPPAVTPEPVALSSQTSEPVESEAPPREPMEAEEVEERAPAQNPELTPGP 248
P Q PP PP P P + P PP +P + A P P
Sbjct: 571 PGVQPPLPPGAPPPPPPPPPGSAGMMYAPPPPPPPPMDPSNFVTMMGMGVAGMPPFGMPP 630
Query: 249 APAGPTP 255
AP P P
Sbjct: 631 APPPPPP 637
Score = 30.4 bits (67), Expect = 9.9
Identities = 28/104 (26%), Positives = 35/104 (33%), Gaps = 26/104 (25%)
Query: 190 QPQHSQPPPQPP------AVTPEPVA--LSSQTSEPVESEAPPREPMEAEEVEERA---- 237
Q Q QPPP PP + TP P ++ T+ PP + +A
Sbjct: 501 QQQQQQPPPPPPPSSSMASSTPLPWQQNTTTTTTSAGTGSIPPWQQQQAAAAASPGAPQM 560
Query: 238 ----------PAQNPELTPGPAPAGPTPAPET----NAPNHPSP 267
P P L PG P P P P + AP P P
Sbjct: 561 QGNPTMVPLPPGVQPPLPPGAPPPPPPPPPGSAGMMYAPPPPPP 604
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 78.6 bits (192), Expect = 3e-14
Identities = 106/369 (28%), Positives = 134/369 (36%), Gaps = 64/369 (17%)
Query: 388 PPPTPNAEA---PPPGPGQASSVAPSSTNVESSAEGAPPPGPAPPPATSHPRVIRISHQS 444
PPP+P +A PP P + S P S S A APP P P S P +
Sbjct: 403 PPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLA--APPLQVPPSPPASPPMSPSATPPP 460
Query: 445 VEPVVMMHMNIQDSGTQPGGVPSAPTGPL-GPPGHGQTLGQQVPGFPTAPTRVVIARPTP 503
P + +Q + P P+ T PL P + Q P P+A + P
Sbjct: 461 QAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPP 520
Query: 504 PQARP-------SHPGGPPVSGTLQGAGLGTNASLAQMVSGLVGQLLMQPVLVAQGTPGM 556
PQA P P PP S TLQ VSG P L PG
Sbjct: 521 PQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSG--------PRLTLALAPGP 572
Query: 557 APPPAPATASA-----SAGTTNTATT---------AGPAPGGPAQPPPTPQPSMADLQFS 602
PPP+ + +S AG +++AT+ +GP G A PPP A+L
Sbjct: 573 PPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPD-----AELAAC 627
Query: 603 QLLGNLLGPAGPGAGGSGVASPTITVAMPGVPAFLQGMTDFL-QATQTAPPPPPPPPPPP 661
GPA P A +P +P PA G D L +T P P P
Sbjct: 628 HPAAWSRGPAPPLAFRGAPGAP-----LPWPPATGPGSADGLCTIYETEGPESATPAPGA 682
Query: 662 PAPEQQTMPPPGSPSGGAGSPGGLGLESLSPE-----------FFTSVVQGVLSS---LL 707
P P PG+ G A + G G S SP+ SVVQ +LS L
Sbjct: 683 LDPG----PSPGTSGGKAAAGAGAGASSRSPKQARLGELPLGALQASVVQHLLSRTLLLA 738
Query: 708 GSLGARAGS 716
+ GA GS
Sbjct: 739 AAEGAAGGS 747
Score = 70.9 bits (172), Expect = 7e-12
Identities = 94/374 (25%), Positives = 125/374 (33%), Gaps = 34/374 (9%)
Query: 392 PNAEAPPPGPGQASSVAPSSTNVESSAEGAPPPGPAPP---PATSHPRVIRISHQSVEPV 448
P+A P P S P + PP A P P +S P + S P
Sbjct: 248 PSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSP--LATPSPSAPPS 305
Query: 449 VMMHMNIQDSGTQPGGVPSAPTGPLGPPG----HGQTLGQQVPGFPTAPTRVVIARPTPP 504
++Q + P PS T LG P H + T P + A PP
Sbjct: 306 PSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALPP 365
Query: 505 -QARPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLVGQLLMQPVLVAQGTPGMAPPPAPA 563
QA PS P PP+S + NA ++ PV P P A
Sbjct: 366 LQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSA 425
Query: 564 TASASAGTTNTATTAGPAPGGPAQPPPTPQ---PSMADLQFSQLLGNLLGPAGPGAGGSG 620
T + A + A P PA PP +P P A + L P P
Sbjct: 426 TPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKP--PPQAPPA 483
Query: 621 VASPTITVAMPGVPAFLQGMTDF-------LQATQTAPPPPPP---------PPPPPPAP 664
+A+P + A+P PA G F + T PP PP PP PP +P
Sbjct: 484 LATPPLQ-ALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASP 542
Query: 665 EQQTMPPPGSPSGGAGSPGGLGLESLSPEFFTSVVQGVLSSLLGSLGARAGSSESIAAFI 724
Q P +P G +L+P + S+L G AG S S +
Sbjct: 543 TLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGP--DLAGHSSSATSTP 600
Query: 725 QRLSGSSNIFEPGA 738
+ L G + E GA
Sbjct: 601 EELRGYDSGPEGGA 614
Score = 65.5 bits (158), Expect = 3e-10
Identities = 85/332 (25%), Positives = 115/332 (34%), Gaps = 61/332 (18%)
Query: 388 PPPTPNAEAPPPGPGQASSVAPSSTNVESSAEGAPPPGPAPPPATSHPRVIRISHQSVEP 447
P P P+A PP G SV SS + S+ E +P P ++ + R + +S+
Sbjct: 181 PRPAPSARPRPPTEGPRKSV--SSASEHSTTEPSPAARRRP---SAGGGLQRPASRSLSS 235
Query: 448 VVMMHMNIQDSGTQPGGVPSAPTGPLGP-------------------------PGHGQTL 482
+ SG G P AP P P P L
Sbjct: 236 SATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPL 295
Query: 483 GQQVPGFPTAPTRVVIARPTPPQARPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLVGQL 542
P P +P + P Q PS P PP T A+ + + S + L
Sbjct: 296 ATPSPSAPPSP-----SAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPL 350
Query: 543 LMQPVLVAQGTPGMAPPP--APATASASAGTTNTATTAGPAPG--------GPAQPPPTP 592
P Q P +A PP AP + AS + AT + AP P PPP+P
Sbjct: 351 ATPP---PQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSP 407
Query: 593 QPSMADLQFSQLLGNLLGPAG--PGAGGSGVASPTITVAMPGVPAFLQGMTDFLQATQTA 650
FS + P+ P +A+P + V P PA + +A
Sbjct: 408 P---VQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVP-PSPPA-------SPPMSPSA 456
Query: 651 PPPPPPPPPPPPAPEQQTMPPPGSPSGGAGSP 682
PPP PPP P Q PPP +P A P
Sbjct: 457 TPPPQAPPPLAAPPLQLAKPPPQAPPALATPP 488
Score = 63.9 bits (154), Expect = 8e-10
Identities = 82/306 (26%), Positives = 102/306 (33%), Gaps = 46/306 (15%)
Query: 399 PGPGQASSVAPSSTNVESSAEGAPPPGPA--PPPATSHPRVIRIS---HQSVEPVVMMHM 453
P PG S + + G P P P+ P P T PR S H + EP
Sbjct: 158 PTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARR 217
Query: 454 NIQDSG--TQPGGVP-SAPTGPLGPPGHGQTLGQQVPGFPTAPTRVVIARP------TPP 504
G +P S+ PL P G G P AP +P PP
Sbjct: 218 RPSAGGGLQRPASRSLSSSATPLSSPARS---GPSARGTPRAPAHPSQPKPKGLQALRPP 274
Query: 505 QARPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLVGQLLMQPVLVAQGTPGMAPPPAPAT 564
Q P P G L + L T + A L P A PP+ AT
Sbjct: 275 QVTPPRKDAAPALGPLSSSPLATPSPSAPPSPSAPPSLQTLP-------SPPATPPSQAT 327
Query: 565 ASASAGTTNTATTAGPAP--GGPAQPPPTPQPSMADLQFSQLLGNLLGPAGPGAGGSGVA 622
S + T + P+P A PPP P++A L L P P A +
Sbjct: 328 TSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALA-------LPPLQAPPSPPA-----S 375
Query: 623 SPTITVAMPGVPAFLQGMTDFLQATQTAPPPPP------PPPPPPPAPEQQTMPPPGSPS 676
P +A P A LQA + PP PP PP PP +P PP +P
Sbjct: 376 PPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSP--SATPPSQAPP 433
Query: 677 GGAGSP 682
A P
Sbjct: 434 SLAAPP 439
Score = 58.9 bits (141), Expect = 3e-08
Identities = 106/457 (23%), Positives = 142/457 (31%), Gaps = 86/457 (18%)
Query: 197 PPQPPAVTPEPVALSSQTSEPVESEAPPREPMEAEEVEERAPAQNPELTPGP-------- 248
PP P TP P A + P++ APP P +P +P TP P
Sbjct: 345 PPLSPLATPPPQAPPALALPPLQ--APPSPPA--------SPPLSPLATPSPQAPNALAV 394
Query: 249 ----APAGPTPAPETNAPNHP--SPAEYVEVLQELQRLESRLQPFLQRYYEVLGAAATTD 302
AP P P+P AP P SP Q S P LQ + +
Sbjct: 395 HLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQ-----VPPSPPAS 449
Query: 303 YNNNHEGREEDQRLINLVGESLRLL---GNTFVALSDLRCNLACTPPRHLHVVRPMSHYT 359
+ Q L L+L AL+ +PP P S
Sbjct: 450 PPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSA 509
Query: 360 TPMVLQQAAIPIQINVGTTVTMTGNGTRPPPTPNAEAP--PPGPGQASSVAPSSTNVESS 417
+ + A P Q + PP +P +AP PP PG +SV+ + +
Sbjct: 510 SLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALA 569
Query: 418 AEGAPPPGPAPPPATSHPRVIRISHQSVEPVVMMHMNIQDSGTQPGGVPSAPTGPLGPPG 477
PPP +P S P + H S + DSG + G S P
Sbjct: 570 PGPPPPPSRSPSSTLSGPDL--AGHSSSATSTPEELRGYDSGPEGGAAASPPPD------ 621
Query: 478 HGQTLGQQVPGFPTAPTRVVIARPTPPQARPSHPGG----PPVSGTLQGAGLGTNASLAQ 533
+ P A +R P PP A PG PP +G GL T
Sbjct: 622 -----AELAACHPAAWSR----GPAPPLAFRGAPGAPLPWPPATGPGSADGLCT------ 666
Query: 534 MVSGLVGQLLMQPVLVAQGTPGMAPPPAPATASASAGTTNTATTAGPAPGGPAQPPPTPQ 593
+ +G P P S GT+ AG G ++ P Q
Sbjct: 667 -------------IYETEGPESATPAPGALDPGPSPGTSGGKAAAGAGAGASSRSP--KQ 711
Query: 594 PSMADLQFSQLLGN----------LLGPAGPGAGGSG 620
+ +L L + LL A AGGSG
Sbjct: 712 ARLGELPLGALQASVVQHLLSRTLLLAAAEGAAGGSG 748
Score = 38.1 bits (87), Expect = 0.047
Identities = 48/199 (24%), Positives = 66/199 (33%), Gaps = 20/199 (10%)
Query: 501 PTPPQA-RPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLVGQLLMQPVLVAQGTPGMAPP 559
P PP + RP P P L AG LA+ G+ G + + A G + P
Sbjct: 27 PRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPESAPRA-GPTRTSRP 85
Query: 560 PAPATASASAGTTNTATTAGPAPG---GPAQPPPTPQPSMADLQFSQLLGNLLGPAGPGA 616
PA + NT+ +PG G +P P Q + + A +
Sbjct: 86 PASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAEETVARGKATEAPKRS 145
Query: 617 GGSGVASPTITVAMPGVPAFLQGMTDFLQATQTAPPPPPP---PPPPPPAPEQQ------ 667
S A + PG P+ T+ P P P P PP P +
Sbjct: 146 ALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASE 205
Query: 668 ---TMPPPGS---PSGGAG 680
T P P + PS G G
Sbjct: 206 HSTTEPSPAARRRPSAGGG 224
Score = 36.2 bits (82), Expect = 0.18
Identities = 26/96 (27%), Positives = 38/96 (39%), Gaps = 6/96 (6%)
Query: 940 PPQPLPEEPMEVQGAERASPEPQRENASPAPGTTAEEAMSRGPPPAPEGGSRDEQDGASA 999
P P +P +Q P R++A+PA G + ++ P AP S S
Sbjct: 257 PAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAPPSPSAP----PSL 312
Query: 1000 ETEPWAAAVPPE--WVPIIQQDIQSQRKVKPQPPLS 1033
+T P A PP + +Q+ P PPLS
Sbjct: 313 QTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLS 348
Score = 33.9 bits (76), Expect = 0.89
Identities = 24/90 (26%), Positives = 35/90 (38%), Gaps = 5/90 (5%)
Query: 191 PQHSQPPPQPPAVTPEPVALSSQTSEPVE-SEAPPREPMEAEEVEERAPAQNPELTPGPA 249
P PP P+ TP P A + P++ ++ PP+ P +A P PG A
Sbjct: 444 PSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQA 503
Query: 250 PAGPTP----APETNAPNHPSPAEYVEVLQ 275
P P+ +P P P +LQ
Sbjct: 504 PFSPSASLPMSPLATPPPQAPPVLAAPLLQ 533
Score = 30.8 bits (68), Expect = 7.6
Identities = 41/145 (28%), Positives = 54/145 (37%), Gaps = 20/145 (13%)
Query: 561 APATASASAGTTNTATTAGPAPGGPAQPPPTPQP-SMADLQFSQLLGNLLGPAGPGAGGS 619
A A A+A P P G +PPP P ++ L + +G P AGG
Sbjct: 8 AKAGAAARTPAARAPGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGR--KPLAERAGGI 65
Query: 620 GVASPTITVAMPGVPAFLQGMTDFLQATQTAPPPPPPPPPPPPAPEQQTMPPPGSPSG-- 677
G A TI + P T+T+ PP P P + T P P S G
Sbjct: 66 GGA--TIPESAPRA-----------GPTRTSRPPASGRGERAP-PAKNTSPGPVSSPGRA 111
Query: 678 -GAGSPGGLGLESLSPEFFTSVVQG 701
G PG LG + L +V +G
Sbjct: 112 SGTTRPGPLGQKGLRISAEETVARG 136
Score = 30.8 bits (68), Expect = 7.6
Identities = 24/83 (28%), Positives = 34/83 (40%), Gaps = 7/83 (8%)
Query: 189 PQPQHSQPPPQ-PPAVTPEPVAL--SSQTSEPVESEAPPREPMEAEEVEERAPAQNPELT 245
P Q ++PPPQ PPA+ P+ S S P ++ P + + P Q P +
Sbjct: 469 PPLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPL-ATPPPQAPPVL 527
Query: 246 PGP---APAGPTPAPETNAPNHP 265
P P P +P AP P
Sbjct: 528 AAPLLQVPPSPPASPTLQAPRRP 550
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 78.6 bits (192), Expect = 3e-14
Identities = 114/425 (26%), Positives = 141/425 (33%), Gaps = 73/425 (17%)
Query: 334 LSDLRCNLACTPPRHLHVVRPMSHYTTPMVLQQAAIPIQINV--GTTVTMTGNGTRPP-- 389
+ L LA + H H+ TP V AA + +V G+ G G P
Sbjct: 26 VGSLESQLAASAAHHHHLAP-----RTPEVRAAAAGALGNHVVSGSPAGAAGAGPAAPAE 80
Query: 390 --PTPNAEAPPPGPGQASSVAPSSTNVESSAEGAPPPGPAPPPATSHPRVIRISHQSVEP 447
P E PP G + P S P GPAPP A P S S P
Sbjct: 81 GAPGAAPEPPPAGRARPGGGGPQRPGPPSPRRPLVPAGPAPPAAKLRPPP-EGSAGSCAP 139
Query: 448 VVMMHMNIQDSGTQPGGVPSAPTGPLGPPGHGQTLGQQVPGFPTAPTRVVIARPTPPQAR 507
V + G AP GP P G + PG P P
Sbjct: 140 V-------PAAAAVAAGPEPAPAGPAKPAGPAALAARAGPGPGPGP-------GPGPGPG 185
Query: 508 PSHPGGPPVSGTLQGAGLGTN-----ASLAQMVSGLVGQLLMQPVLVAQGT-------PG 555
P P GP + TL G+ N A +V+ LL P A GT G
Sbjct: 186 PGKPAGPGAAQTLNGSAALLNSHHAAAPAVSLVNNGPAALLPLPKPAAPGTVIQTPPFVG 245
Query: 556 MAPPPAPATASASAGTTNTATTAGPAPGGPAQPPPTPQPSMADLQFSQLLGNLLGPAGPG 615
A PPAPA S A PAP PA PP P P+ A L ++ G+ PAGP
Sbjct: 246 AAAPPAPAAPS---------PPAAPAPAAPAAAPPPPPPAPATL--ARPPGH---PAGP- 290
Query: 616 AGGSGVASPTITVAMPGVPAFLQGMTDFLQATQTAPPPPPPPPPPPPAPEQQTMPPPGSP 675
PT A+P A G + A P P P P Q P
Sbjct: 291 --------PTAAPAVPPPAAAQNG------GSAGAAPAPAPAAGGPAGVSGQPGP----- 331
Query: 676 SGGAGSPGGLGLESLSPEFFTSVVQGVLSSLLGSLGARAGSSESIAAFIQRLSGSSNIFE 735
G A + G+++ SP+ +L S A +S I +Q S
Sbjct: 332 -GAAAAAPAPGVKAESPKRVVQAAPPAAQTLAASGPASTAASMVIGPTMQGALPSPAAVP 390
Query: 736 PGADG 740
P A G
Sbjct: 391 PPAPG 395
Score = 76.6 bits (187), Expect = 1e-13
Identities = 90/304 (29%), Positives = 109/304 (35%), Gaps = 49/304 (16%)
Query: 385 GTRPPPTPNAEAPPPGPGQASSVAPSSTNVESSAEGAPPPGPAPPPATSHPRVIRISHQS 444
G PP P A +PP P A+ A + A A PPG P T+ P V
Sbjct: 245 GAAAPPAPAAPSPPAAPAPAAPAAAPPPPPPAPATLARPPGHPAGPPTAAPAV------- 297
Query: 445 VEPVVMMHMNIQDSGTQPGGVPSA--PTGPLGPPGHGQTLGQQVPGFPT-APTRVVIARP 501
P N +G P P+A P G G PG G PG +P RVV A
Sbjct: 298 --PPPAAAQNGGSAGAAPAPAPAAGGPAGVSGQPGPGAAAAAPAPGVKAESPKRVVQA-- 353
Query: 502 TPPQARPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLVGQ-LLMQPVLV---AQGTPGMA 557
PP + TL +G + A A MV G Q L P V A GTP
Sbjct: 354 -----------APPAAQTLAASGPASTA--ASMVIGPTMQGALPSPAAVPPPAPGTPTGL 400
Query: 558 PPPAPATASASAGTTNTATTAG------PAPGGPAQPPPTPQPSMADLQFSQLLGNLLGP 611
P A + S T TATT+G P P P P P+ ++Q QL P
Sbjct: 401 PKGAAGAVTQSLSRTPTATTSGIRATLTPTVLAPRLPQPPQNPT--NIQNFQL------P 452
Query: 612 AGPGAGGSGVASPTITVAMPGVPAFLQGMTDFLQATQTAPPPPPPPPPPPPAPEQQTMPP 671
G V S + M A Q QT P P P P + T+
Sbjct: 453 PGMVL----VRSENGQLLMIPQQALAQMQAQAHAQPQTTMAPRPATPTSAPPVQISTVQA 508
Query: 672 PGSP 675
PG+P
Sbjct: 509 PGTP 512
Score = 38.9 bits (89), Expect = 0.028
Identities = 55/186 (29%), Positives = 66/186 (35%), Gaps = 44/186 (23%)
Query: 533 QMVSGLVGQLLMQPVLVAQGTPGMAP--PPAPATASASAG----TTNTATTAGPAPGGPA 586
++VS LVG L Q A +AP P A A+ + G + + A AG P PA
Sbjct: 20 KVVSDLVGSLESQLAASAAHHHHLAPRTPEVRAAAAGALGNHVVSGSPAGAAGAGPAAPA 79
Query: 587 Q--PPPTPQPSMADLQFSQLLGNLLGPAGPGAGG---SGVASP--TITVAMPGVPAFLQG 639
+ P P+P A G A PG GG G SP + A P PA
Sbjct: 80 EGAPGAAPEPPPA------------GRARPGGGGPQRPGPPSPRRPLVPAGPAPPAAKLR 127
Query: 640 MTDFLQATQTAPPP--------PPPPPPPPPAP------EQQTMPPPG-----SPSGGAG 680
A AP P P P P P P + P PG P G G
Sbjct: 128 PPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAKPAGPAALAARAGPGPGPGPGPGPGPGPG 187
Query: 681 SPGGLG 686
P G G
Sbjct: 188 KPAGPG 193
Score = 37.0 bits (84), Expect = 0.11
Identities = 121/524 (23%), Positives = 173/524 (33%), Gaps = 123/524 (23%)
Query: 86 ERAPPQTHLPSGASSGTGSASATHGGGSPPGT-------RGPGASVHDRNA-----NSYV 133
E AP P+G ++ A G G PG GPGA+ + + +
Sbjct: 151 EPAPAGPAKPAGPAALAARAGPGPGPGPGPGPGPGPGKPAGPGAAQTLNGSAALLNSHHA 210
Query: 134 MVGTFNLPSDGSAVDVHINMEQAP---IQSEPRVRLVMAQHMIRDIQTLLSRMECRGGPQ 190
+L ++G A + + AP IQ+ P V P
Sbjct: 211 AAPAVSLVNNGPAALLPLPKPAAPGTVIQTPPFVGAAAPP--------------APAAPS 256
Query: 191 PQHSQPPPQPPAVTPEPVALSSQTSEPVESEAPPREPMEAEEVEERAPAQNPELTPGPAP 250
P + P P A P P + + P A P P A V A AQN G A
Sbjct: 257 PPAAPAPAAPAAAPPPPPPAPATLARPPGHPAGP--PTAAPAVPPPAAAQNG----GSAG 310
Query: 251 AGPTPAPETNAP----NHPSPAEYVEVLQELQRLESRLQPFLQRYYEVLGAAATTDYNNN 306
A P PAP P P P GAAA
Sbjct: 311 AAPAPAPAAGGPAGVSGQPGP----------------------------GAAAAAPAPG- 341
Query: 307 HEGREEDQRLINLVGESLRLLGNTFVALSDLRCNLACTPPRHL---HVVRPMSHYTTPMV 363
E +R++ + + L + A + + T L V P + T +
Sbjct: 342 -VKAESPKRVVQAAPPAAQTLAASGPASTAASMVIGPTMQGALPSPAAVPPPAPGTPTGL 400
Query: 364 LQQAAIPIQINVGTTVTMTGNGTRPPPTPNAEAPP-PGPGQASSVAPSSTNVESSAEGAP 422
+ AA + ++ T T T +G R TP AP P P Q + TN+++
Sbjct: 401 PKGAAGAVTQSLSRTPTATTSGIRATLTPTVLAPRLPQPPQ------NPTNIQNF---QL 451
Query: 423 PPGPAPPPATSHPRVIRISHQSVEPV-VMMHMNIQDSGTQPGGVPSAPTGPLGPPGHGQT 481
PPG + + +++ I Q++ + H Q T P+ PT PP T
Sbjct: 452 PPGMV-LVRSENGQLLMIPQQALAQMQAQAHAQPQ---TTMAPRPATPTS--APPVQIST 505
Query: 482 LGQQVPGFP-----TAPTRVV----IARPT--PPQARPSHPGGPP---VSGTLQGAGLGT 527
+ Q PG P PT ++ A+ T P PG P + G Q A LGT
Sbjct: 506 V--QAPGTPIIARQVTPTTIIKQVSQAQTTVQPSATLQRSPGVQPQLVLGGAAQTASLGT 563
Query: 528 NASLAQMVSGLVGQLLMQPVLVAQGTPGMAPPPAPATASASAGT 571
+ V GTP P A T+SA+ T
Sbjct: 564 ATA------------------VQTGTPQRTVPGATTTSSAATET 589
Score = 33.5 bits (75), Expect = 1.2
Identities = 37/146 (25%), Positives = 50/146 (34%), Gaps = 24/146 (16%)
Query: 924 PVGPDAILRYVRRVGDPPQPLPEEPMEVQGAERASPEPQRENASPAPGTTAE-------- 975
P P +++ VG P P P A+P PAP T A
Sbjct: 231 PAAPGTVIQTPPFVGAAAPPAPAAPSPPAAPAPAAPAAAPPPPPPAPATLARPPGHPAGP 290
Query: 976 -EAMSRGPPP--APEGGSRDEQD----------GASAETEPWAAAVPPEWVPIIQQDIQS 1022
A PPP A GGS G S + P AAA P P ++ +
Sbjct: 291 PTAAPAVPPPAAAQNGGSAGAAPAPAPAAGGPAGVSGQPGPGAAAAAP--APGVKAE-SP 347
Query: 1023 QRKVKPQPPLSDAYLSGMPAKRRKTM 1048
+R V+ PP + + PA +M
Sbjct: 348 KRVVQAAPPAAQTLAASGPASTAASM 373
Score = 30.8 bits (68), Expect = 7.6
Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 5/64 (7%)
Query: 940 PPQPLPEEPMEVQG----AERASPEPQRENASPAPGTTAEEAMSRGPPPAPEGGSRDEQD 995
P P P P+ G A + P P+ S AP A A++ GP PAP G ++
Sbjct: 105 PGPPSPRRPLVPAGPAPPAAKLRPPPEGSAGSCAP-VPAAAAVAAGPEPAPAGPAKPAGP 163
Query: 996 GASA 999
A A
Sbjct: 164 AALA 167
>gi|117306167 proline-rich protein BstNI subfamily 3 precursor [Homo
sapiens]
Length = 309
Score = 76.3 bits (186), Expect = 2e-13
Identities = 88/309 (28%), Positives = 95/309 (30%), Gaps = 75/309 (24%)
Query: 388 PPPTPNAEAPPPGPGQASSVAPSSTNVESSAEGAPPPG----PAPPPATSHPRVIRISHQ 443
PPP E PP G S P EG PP G PPP P +
Sbjct: 51 PPPPGKPEGRPPQGGNQSQGPPPRPG---KPEGPPPQGGNQSQGPPPRPGKP-------E 100
Query: 444 SVEPVVMMHMNIQDSGTQPGGVPSAPTGPLGPPGHGQTLGQQVP---GFPTAPTRVVIAR 500
P G Q G P P P GPP G Q P G P P +
Sbjct: 101 GQPP---------QGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQ 151
Query: 501 PTPPQARPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLVGQLLMQPVLVAQGTPGMAPPP 560
P RP P GPP G Q G + + G Q G PPP
Sbjct: 152 SQGPPPRPGKPEGPPPQGGNQSQGPPPHPGKPE---GPPPQ---------GGNQSQGPPP 199
Query: 561 APATASASAGTTNTATTAGPAPGGPAQ---PPPTPQPSMADLQFSQLLGNLLGPAGPGAG 617
P GP P G Q PPP P G GP P G
Sbjct: 200 RPGKPE------------GPPPQGGNQSQGPPPRP-------------GKPEGP--PSQG 232
Query: 618 GSGVASPTITVAMPGVPAFLQGMTDFLQATQTAPPPPPPPPPPPP--APEQQTMPPPGSP 675
G+ P P P +G Q PPP P PPPP P+Q PP G P
Sbjct: 233 GNKPQGPPPHPGKPQGPPPQEG-----NKPQRPPPPGRPQGPPPPGGNPQQPLPPPAGKP 287
Query: 676 SGGAGSPGG 684
G P G
Sbjct: 288 QGPPPPPQG 296
Score = 55.5 bits (132), Expect = 3e-07
Identities = 60/219 (27%), Positives = 69/219 (31%), Gaps = 49/219 (22%)
Query: 383 GNGTRPPPT--PNAEAPPPGPGQASSVAPSSTNVESSAEGAPP-PG--PAPPPATSHPRV 437
G PPP ++ PPP PG+ P N ++G PP PG PPP
Sbjct: 118 GKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGN---QSQGPPPRPGKPEGPPP------- 167
Query: 438 IRISHQSVEPVVMMHMNIQDSGTQPGGVPSAPTGPLGPPGHGQTLGQ---QVPGFPTAPT 494
G Q G P P P GPP G Q PG P P
Sbjct: 168 -------------------QGGNQSQGPPPHPGKPEGPPPQGGNQSQGPPPRPGKPEGPP 208
Query: 495 RVVIARPTPPQARPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLVGQLLMQPVLVAQGTP 554
+ P RP P GPP G + G + Q G +P G P
Sbjct: 209 PQGGNQSQGPPPRPGKPEGPPSQGGNKPQGPPPHPGKPQGPPPQEGNKPQRP--PPPGRP 266
Query: 555 GMAPPPAPATASASAGTTNTATTAGPAPGGPAQPPPTPQ 593
PPP N P G P PPP PQ
Sbjct: 267 QGPPPPG----------GNPQQPLPPPAGKPQGPPPPPQ 295
Score = 52.4 bits (124), Expect = 2e-06
Identities = 79/313 (25%), Positives = 86/313 (27%), Gaps = 125/313 (39%)
Query: 385 GTRPPPTPNAEAPPPGPGQASSVAPSSTNVESSAEGAPP-PGP--APPPATSHPRVIRIS 441
G RP + PP PG+ P N ++G PP PG PPP
Sbjct: 38 GRRPQGGNQPQRTPPPPGKPEGRPPQGGN---QSQGPPPRPGKPEGPPP----------- 83
Query: 442 HQSVEPVVMMHMNIQDSGTQPGGVPSAPTGPLGPPGHGQTLGQQVPGFPTAPTRVVIARP 501
G Q G P P P G P G G Q G
Sbjct: 84 ---------------QGGNQSQGPPPRPGKPEGQPPQG---GNQSQG------------- 112
Query: 502 TPPQARPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLVGQLLMQPVLVAQGTPGMAPPPA 561
P RP P GPP G Q G PPP
Sbjct: 113 --PPPRPGKPEGPPPQGGNQSQG---------------------------------PPPR 137
Query: 562 PATASASAGTTNTATTAGPAPGGPAQ---PPPTPQPSMADLQFSQLLGNLLGPAGPGAGG 618
P GP P G Q PPP P G GP P GG
Sbjct: 138 PGKPE------------GPPPQGGNQSQGPPPRP-------------GKPEGP--PPQGG 170
Query: 619 SGVASPTITVAMPGVPAFLQGMTDFLQATQTAPPPPPPPPPPPPAPEQQTMPPP------ 672
+ P P P G +Q PP P P PPP Q+ PP
Sbjct: 171 NQSQGPPPHPGKPEGPPPQGG-----NQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKP 225
Query: 673 -GSPSGGAGSPGG 684
G PS G P G
Sbjct: 226 EGPPSQGGNKPQG 238
Score = 52.0 bits (123), Expect = 3e-06
Identities = 64/237 (27%), Positives = 69/237 (29%), Gaps = 65/237 (27%)
Query: 459 GTQPGGVPSAPTGPLGPPGHGQTLGQQVPGFPTAPTRVVIARPTPPQARPSHPGGPPVSG 518
G QP P P P G P G Q P P P PPQ G PP G
Sbjct: 44 GNQPQRTPPPPGKPEGRPPQGGNQSQGPPPRPGKP------EGPPPQGGNQSQGPPPRPG 97
Query: 519 TLQGAGLGTNASLAQMVSGLVGQLLMQPVLVAQGTPGMAPPPAPATASASAGTTNTATTA 578
+G QP G PPP P
Sbjct: 98 KPEG----------------------QPP--QGGNQSQGPPPRPGKPE------------ 121
Query: 579 GPAPGGPAQ---PPPTPQPSMADLQFSQLLGNLLGPAGPGAGGSGVASPTITVAMPGVPA 635
GP P G Q PPP P G GP P GG+ P P P
Sbjct: 122 GPPPQGGNQSQGPPPRP-------------GKPEGP--PPQGGNQSQGPPPRPGKPEGPP 166
Query: 636 FLQGMTDFLQATQTAPPPPPPPPPPPPAPEQQTMPPPGSPSGGAGSPGGLGLESLSP 692
G +Q PP P P PPP Q+ PP P G P G +S P
Sbjct: 167 PQGG-----NQSQGPPPHPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGP 218
Score = 37.4 bits (85), Expect = 0.081
Identities = 29/105 (27%), Positives = 36/105 (34%), Gaps = 23/105 (21%)
Query: 186 RGGPQPQHSQPPPQPPAVTPEPVALSSQTSEP-------------VESEAPPREPMEAEE 232
+GG QPQ + PPP P P SQ P +S+ PP P + E
Sbjct: 42 QGGNQPQRTPPPPGKPEGRPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEG 101
Query: 233 V------EERAPAQNPELTPGPAPAGPT----PAPETNAPNHPSP 267
+ + P P GP P G P P P P P
Sbjct: 102 QPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPP 146
Score = 36.6 bits (83), Expect = 0.14
Identities = 26/83 (31%), Positives = 31/83 (37%), Gaps = 14/83 (16%)
Query: 186 RGGPQPQHSQPPPQPPAVTPEPVALSSQTSEPVESEAPPREPMEAEEVEERAPAQNPEL- 244
+GG +PQ P P P P P E P R P P NP+
Sbjct: 231 QGGNKPQGPPPHPGKPQGPP-----------PQEGNKPQRPPPPGRPQGPPPPGGNPQQP 279
Query: 245 TPGPA--PAGPTPAPETNAPNHP 265
P PA P GP P P+ P+ P
Sbjct: 280 LPPPAGKPQGPPPPPQGGRPHRP 302
Score = 36.2 bits (82), Expect = 0.18
Identities = 24/88 (27%), Positives = 30/88 (34%), Gaps = 8/88 (9%)
Query: 188 GPQPQHSQ----PPPQPPAVTPEPVALSSQTSEPVESEAPPREPMEAEEVEERAPAQNPE 243
GP PQ PPP+P +P +Q+ P P P + + P P
Sbjct: 80 GPPPQGGNQSQGPPPRPGKPEGQPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPG 139
Query: 244 LTPGPAPAGPT----PAPETNAPNHPSP 267
GP P G P P P P P
Sbjct: 140 KPEGPPPQGGNQSQGPPPRPGKPEGPPP 167
Score = 35.4 bits (80), Expect = 0.31
Identities = 24/88 (27%), Positives = 30/88 (34%), Gaps = 8/88 (9%)
Query: 188 GPQPQHSQ----PPPQPPAVTPEPVALSSQTSEPVESEAPPREPMEAEEVEERAPAQNPE 243
GP PQ PPP+P P +Q+ P P P + + P +P
Sbjct: 122 GPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPHPG 181
Query: 244 LTPGPAPAGPT----PAPETNAPNHPSP 267
GP P G P P P P P
Sbjct: 182 KPEGPPPQGGNQSQGPPPRPGKPEGPPP 209
Score = 35.4 bits (80), Expect = 0.31
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 8/60 (13%)
Query: 938 GDPPQP-LPEEPMEVQGAE-RASPEPQRENASPAPGTTAEEAMS------RGPPPAPEGG 989
G PP P P+ P +G + + P P R P PG ++ + +GPPP P+GG
Sbjct: 238 GPPPHPGKPQGPPPQEGNKPQRPPPPGRPQGPPPPGGNPQQPLPPPAGKPQGPPPPPQGG 297
Score = 34.3 bits (77), Expect = 0.68
Identities = 24/86 (27%), Positives = 30/86 (34%), Gaps = 6/86 (6%)
Query: 186 RGGPQPQHSQPPPQPPAVTPEPVALSSQTSEPVESEAPPREPMEAEEVEERAPAQNPELT 245
+GG Q Q PPP+P P +Q+ P P P + + P P
Sbjct: 105 QGGNQSQG--PPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKP 162
Query: 246 PGPAPAGPT----PAPETNAPNHPSP 267
GP P G P P P P P
Sbjct: 163 EGPPPQGGNQSQGPPPHPGKPEGPPP 188
Score = 33.5 bits (75), Expect = 1.2
Identities = 27/99 (27%), Positives = 31/99 (31%), Gaps = 19/99 (19%)
Query: 188 GPQPQHSQ----PPPQPPAVTPEPVALSSQTSEPVESEAPPREPMEAEEVEERAPAQNPE 243
GP PQ PPP P P +Q+ P P P + + P P
Sbjct: 164 GPPPQGGNQSQGPPPHPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPG 223
Query: 244 LTPGP------APAGPTPAP---------ETNAPNHPSP 267
GP P GP P P E N P P P
Sbjct: 224 KPEGPPSQGGNKPQGPPPHPGKPQGPPPQEGNKPQRPPP 262
Score = 33.1 bits (74), Expect = 1.5
Identities = 35/122 (28%), Positives = 42/122 (34%), Gaps = 7/122 (5%)
Query: 938 GDPPQPLPEEPMEVQGAERASPEPQRENASPAPGTTAEEAMSRGPPPAPEGGSRDEQDGA 997
G PP+P E QG ++ P R P S+GPPP P G
Sbjct: 91 GPPPRPGKPEGQPPQGGNQSQGPPPRPGKPEGPPPQGGN-QSQGPPPRPGKPEGPPPQGG 149
Query: 998 SAETEPWAAAVPPEWVPIIQQDIQSQ----RKVKPQ-PPLSDAYLSGMPAKRRKTMQGEG 1052
+ P PE P Q QSQ KP+ PP S P R +G
Sbjct: 150 NQSQGPPPRPGKPEGPP-PQGGNQSQGPPPHPGKPEGPPPQGGNQSQGPPPRPGKPEGPP 208
Query: 1053 PQ 1054
PQ
Sbjct: 209 PQ 210
Score = 32.7 bits (73), Expect = 2.0
Identities = 23/86 (26%), Positives = 28/86 (32%), Gaps = 8/86 (9%)
Query: 188 GPQPQHSQ----PPPQPPAVTPEPVALSSQTSEPVESEAPPREPMEAEEVEERAPAQNPE 243
GP PQ PPP+P P +Q+ P P P + + P P
Sbjct: 143 GPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPHPGKPEGPPPQGGNQSQGPPPRPG 202
Query: 244 LTPGPAPAGPT----PAPETNAPNHP 265
GP P G P P P P
Sbjct: 203 KPEGPPPQGGNQSQGPPPRPGKPEGP 228
Score = 32.3 bits (72), Expect = 2.6
Identities = 35/120 (29%), Positives = 41/120 (34%), Gaps = 7/120 (5%)
Query: 940 PPQPLPEEPMEVQGAERASPEPQRENASPAPGTTAEEAMSRGPPPAPEGGSRDEQDGASA 999
PP P E QG ++ P R P S+GPPP P G +
Sbjct: 51 PPPPGKPEGRPPQGGNQSQGPPPRPGKPEGPPPQGGN-QSQGPPPRPGKPEGQPPQGGNQ 109
Query: 1000 ETEPWAAAVPPEWVPIIQQDIQSQ----RKVKPQ-PPLSDAYLSGMPAKRRKTMQGEGPQ 1054
P PE P Q QSQ R KP+ PP S P R +G PQ
Sbjct: 110 SQGPPPRPGKPEGPP-PQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQ 168
Score = 32.0 bits (71), Expect = 3.4
Identities = 28/97 (28%), Positives = 34/97 (35%), Gaps = 14/97 (14%)
Query: 938 GDPPQPLPEEPMEVQGAERAS---PEPQRENASPAPGTTAEEAMSRGPPPAPEGGSRDEQ 994
G PP+P E QG ++ P P + P G S+GPPP P
Sbjct: 154 GPPPRPGKPEGPPPQGGNQSQGPPPHPGKPEGPPPQGGN----QSQGPPPRPGKPEGPPP 209
Query: 995 DGASAETEPWAAAVPPEWVPIIQQDIQSQRKVKPQPP 1031
G + P PE P SQ KPQ P
Sbjct: 210 QGGNQSQGPPPRPGKPEGPP-------SQGGNKPQGP 239
Score = 30.4 bits (67), Expect = 9.9
Identities = 29/104 (27%), Positives = 33/104 (31%), Gaps = 8/104 (7%)
Query: 938 GDPPQPLPEEPMEVQGAERASPEPQRENASPAPGTTAEEAMSRGPPPAPEGGSRDEQDGA 997
G PP P E QG ++ P R P S+GPPP P G
Sbjct: 175 GPPPHPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGN-QSQGPPPRPGKPEGPPSQGG 233
Query: 998 SAETEPWAAAVPPEWVPIIQQDIQSQRKVKPQPPLSDAYLSGMP 1041
+ P PP P Q Q KPQ P G P
Sbjct: 234 NKPQGP-----PPH--PGKPQGPPPQEGNKPQRPPPPGRPQGPP 270
>gi|160707881 formin 2 [Homo sapiens]
Length = 1722
Score = 75.1 bits (183), Expect = 3e-13
Identities = 89/302 (29%), Positives = 105/302 (34%), Gaps = 44/302 (14%)
Query: 388 PPPTPNAEAPPPGPGQASSVAPSSTNVESSAEGAPPPGPAPPPATSHPRVIRISHQSVEP 447
PPP P A PPP P + + P G PPP P P A P + + + P
Sbjct: 912 PPPLPGAGIPPPPPLPGAGILPLPP---LPGAGIPPPPPLPGAAIPPPPPLPGAGIPLPP 968
Query: 448 VVMMHMNIQDSGTQPG-GVPSAPTGPLGPPGHGQTLGQQVPGFPTAPTRVVIARPTPPQA 506
+ I PG G+P P PL PG G +PG P + PP
Sbjct: 969 P-LPGAGIPPPPPLPGAGIPPPP--PL--PGAGIPPPPPLPGAGIPPPPPLPGAGIPPP- 1022
Query: 507 RPSHPG-GPPVSGTLQGAGLGTNASLAQMVSGLVGQLLMQPVLVAQGTPGMAPPPAPATA 565
P PG G P L GAG+ L + P L G P PPP P
Sbjct: 1023 -PPLPGAGIPPPPPLPGAGIPPPPPLPG------AGIPPPPPLPGAGIP--PPPPLPGAG 1073
Query: 566 SASAGTTNTATTAGPAP-GGPAQPPPTPQPSMADLQFSQLLGNLLGPAGPGAGGSGVASP 624
A P P G PPP P P + L G + P P G+G+ P
Sbjct: 1074 IPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGVGIPPPPPLPGAGIPPPPP-LPGAGIPPP 1132
Query: 625 TITVAMPGVPAFLQGMTDFLQATQTAPPPPPPP----PPPPPAPEQQTMPPPGSPSGGAG 680
+PG PPPPP P PPPPP P PPP P G
Sbjct: 1133 P---PLPGAGI---------------PPPPPLPRVGIPPPPPLPGAGIPPPPPLPGAGIP 1174
Query: 681 SP 682
P
Sbjct: 1175 PP 1176
Score = 73.9 bits (180), Expect = 8e-13
Identities = 94/325 (28%), Positives = 112/325 (34%), Gaps = 52/325 (16%)
Query: 380 TMTGNGTRPPPTPNAEAPPPGPGQASSVAPSSTNVE----SSAEGAPPPGPAPPPATSHP 435
+M G G PPP PPP PG PS+ + E PPP P P P P
Sbjct: 869 SMPGLGMVPPP------PPPLPGMTVPTLPSTAIPQPPPLQGTEMLPPP-PPPLPGAGIP 921
Query: 436 RVIRISHQSVEPVVMMHMNIQDSGTQPGG-VPSAPTGPLGP-PGHGQTLGQQVPGFPTAP 493
+ + P+ + +G P +P A P P PG G L +PG P
Sbjct: 922 PPPPLPGAGILPLPPL----PGAGIPPPPPLPGAAIPPPPPLPGAGIPLPPPLPGAGIPP 977
Query: 494 TRVVIARPTPPQARPSHPG-GPPVSGTLQGAGLGTNASLAQMVSGLVGQLLMQPVLVAQG 552
+ PP P PG G P L GAG+ L + P L G
Sbjct: 978 PPPLPGAGIPPP--PPLPGAGIPPPPPLPGAGIPPPPPLPG------AGIPPPPPLPGAG 1029
Query: 553 TPGMAPPPAPATASASAGTTNTATTAGPAP-GGPAQPPPTPQPSMADLQFSQLLGNLLGP 611
P PPP P A P P G PPP P P L G + P
Sbjct: 1030 IP--PPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPP 1087
Query: 612 AGPGAGGSGVASPTITVAMPGVPAFLQGMTDFLQATQTAPPPPPPP----PPPPPAPEQQ 667
P G+G+ P +PGV PPPPP P PPPPP P
Sbjct: 1088 PPP-LPGAGIPPPP---PLPGVGI---------------PPPPPLPGAGIPPPPPLPGAG 1128
Query: 668 TMPPPGSPSGGAGSPGGLGLESLSP 692
PPP P G P L + P
Sbjct: 1129 IPPPPPLPGAGIPPPPPLPRVGIPP 1153
Score = 70.5 bits (171), Expect = 9e-12
Identities = 88/298 (29%), Positives = 101/298 (33%), Gaps = 55/298 (18%)
Query: 388 PPPTPNAEAPPPGPGQASSVAPSSTNVESSAEGAPPPGPAPPPATSHPRVIRISHQSVEP 447
PPP P A PPP P + + P GA P P P P P P
Sbjct: 967 PPPLPGAGIPPPPPLPGAGIPPPPP-----LPGAGIPPPPPLPGAGIP----------PP 1011
Query: 448 VVMMHMNIQDSGTQPG-GVPSAPTGPLGPPGHGQTLGQQVPGFPTAPTRVVIARPTPPQA 506
+ I PG G+P P PL PG G +PG P + PP
Sbjct: 1012 PPLPGAGIPPPPPLPGAGIPPPP--PL--PGAGIPPPPPLPGAGIPPPPPLPGAGIPPP- 1066
Query: 507 RPSHPG-GPPVSGTLQGAGLGTNASLAQMVSGLVGQLLMQPVLVAQGTPGMAPPPAPATA 565
P PG G P L GAG+ L + P L G P PPP P
Sbjct: 1067 -PPLPGAGIPPPPPLPGAGIPPPPPLPG------AGIPPPPPLPGVGIP--PPPPLPGAG 1117
Query: 566 SASAGTTNTATTAGPAP-GGPAQPPPTPQPSMADLQFSQLLGNLLGPAGPGAGGSGVASP 624
A P P G PPP P P + L G + P P G+G+ P
Sbjct: 1118 IPPPPPLPGAGIPPPPPLPGAGIPPPPPLPRVGIPPPPPLPGAGIPPPPP-LPGAGIPPP 1176
Query: 625 TITVAMPGVPAFLQGMTDFLQATQTAPPPPPPP----PPPPPAPEQQTMPPPGSPSGG 678
+PGV PPPPP P PPPPP P PPP P G
Sbjct: 1177 P---PLPGVGI---------------PPPPPLPGVGIPPPPPLPGAGIPPPPPLPGMG 1216
Score = 63.5 bits (153), Expect = 1e-09
Identities = 83/304 (27%), Positives = 99/304 (32%), Gaps = 38/304 (12%)
Query: 388 PPPTPNAEAPPPGPGQASSVAPSSTNVESSAEGAPPPGPAPPPATSHPRVIRISHQSVEP 447
PPP P A PPP P + + P G PPP P P P + P
Sbjct: 978 PPPLPGAGIPPPPPLPGAGIPPPPP---LPGAGIPPPPPLPGAGIPPPPPLP-GAGIPPP 1033
Query: 448 VVMMHMNIQDSGTQPG-GVPSAPTGP-LGPPGHGQTLGQQVPGFPTAPTRVVIARPTPPQ 505
+ I PG G+P P P G P G +P P P + P PP
Sbjct: 1034 PPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGI--PPPPPL 1091
Query: 506 ARPSHPGGPPVSGT-------LQGAGLGTNASLAQMVSGLVGQLLMQPVLVAQGTPGMAP 558
P PP+ G L GAG+ L + P L G P P
Sbjct: 1092 PGAGIPPPPPLPGVGIPPPPPLPGAGIPPPPPLPG------AGIPPPPPLPGAGIP--PP 1143
Query: 559 PPAPATASASAGTTNTATTAGPAP-GGPAQPPPTPQPSMADLQFSQLLGNLLGPAGPGAG 617
PP P A P P G PPP P P + L G + P P
Sbjct: 1144 PPLPRVGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGVGIPPPPPLPGVGIPPPPP-LP 1202
Query: 618 GSGVASPTITVAMPGVPAFLQGMTDFLQATQTAPPPPPPPPPPPPAPEQQTMPPPGSPSG 677
G+G+ P M PA APP PPP PP P PP P
Sbjct: 1203 GAGIPPPPPLPGMGIPPA-------------PAPPLPPPGTGIPPPPLLPVSGPPLLPQV 1249
Query: 678 GAGS 681
G+ +
Sbjct: 1250 GSST 1253
Score = 57.0 bits (136), Expect = 1e-07
Identities = 70/243 (28%), Positives = 84/243 (34%), Gaps = 19/243 (7%)
Query: 388 PPPTPNAEAPPPGPGQASSVAPSSTNVESSAEGAPPPGPAPPPATSHPRVIRISHQSVEP 447
PPP P A PPP P + + P G PPP P P P + P
Sbjct: 1044 PPPLPGAGIPPPPPLPGAGIPPPPP---LPGAGIPPPPPLPGAGIPPPPPLP-GAGIPPP 1099
Query: 448 VVMMHMNIQDSGTQPG-GVPSAPTGP-LGPPGHGQTLGQQVPGFPTAPTRVVIARPTPPQ 505
+ + I PG G+P P P G P G +P P P RV I P PP
Sbjct: 1100 PPLPGVGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLP-RVGIP-PPPPL 1157
Query: 506 ARPSHPGGPPVSGT-------LQGAGLGTNASLAQMVSGLVGQLLMQPVLVAQGTPGMAP 558
P PP+ G L G G+ L + L + PGM
Sbjct: 1158 PGAGIPPPPPLPGAGIPPPPPLPGVGIPPPPPLPGVGIPPPPPLPGAGIPPPPPLPGMGI 1217
Query: 559 PPAPATASASAGTTNTATTAGPAPGGPAQPPPTPQPSMADLQFSQLLGNLLGPAGPGAGG 618
PPAPA GT P G PP PQ + L Q+ G L P G G
Sbjct: 1218 PPAPAPPLPPPGTGIPPPPLLPVSG----PPLLPQVGSSTLPTPQVCGFLPPPLPSGLFG 1273
Query: 619 SGV 621
G+
Sbjct: 1274 LGM 1276
Score = 54.3 bits (129), Expect = 6e-07
Identities = 69/262 (26%), Positives = 91/262 (34%), Gaps = 72/262 (27%)
Query: 454 NIQDSGTQPGGV---------PSAPTGPLGPPGHGQTLGQQVPGFPTAPTRVVIA----R 500
+IQ S T+ GGV P P P G QT +P R+ + +
Sbjct: 743 SIQTSPTEEGGVLTLPPVDGLPGRPPCPPGAESGPQTKFCSEISLIVSPRRISVQLDSHQ 802
Query: 501 PTPPQARPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLVGQLLMQPVLVAQGTPGM---A 557
PT ++P PP L AG G S Q + + + +
Sbjct: 803 PTQSISQP-----PPPPSLLWSAGQGQPGSQPPHSISTEFQTSHEHSVSSAFKNSCNIPS 857
Query: 558 PPPAPATASASAGTTNTATTAGPAPG-GPAQPPPTPQPSMADLQFSQLLGNLLGPAGPGA 616
PPP P T S+S+ PG G PPP P P
Sbjct: 858 PPPLPCTESSSS-----------MPGLGMVPPPPPPLP---------------------- 884
Query: 617 GGSGVASPTI-TVAMPGVPAFLQGMTDFLQATQTAPPPPPP-----PPPPPPAPEQQTMP 670
G+ PT+ + A+P P LQ T+ PPPPPP PPPPP P +P
Sbjct: 885 ---GMTVPTLPSTAIPQPPP--------LQGTEMLPPPPPPLPGAGIPPPPPLPGAGILP 933
Query: 671 PPGSPSGGAGSPGGLGLESLSP 692
P P G P L ++ P
Sbjct: 934 LPPLPGAGIPPPPPLPGAAIPP 955
Score = 47.8 bits (112), Expect = 6e-05
Identities = 46/146 (31%), Positives = 51/146 (34%), Gaps = 23/146 (15%)
Query: 381 MTGNGT-RPPPTPNAEAPPPGPGQASSVAPSSTNVESSAEGAPPPGPAP----PPATSHP 435
+ G G PPP P PPP P + + P G PPP P P PP P
Sbjct: 1135 LPGAGIPPPPPLPRVGIPPPPPLPGAGIPPPP---PLPGAGIPPPPPLPGVGIPPPPPLP 1191
Query: 436 RVIRISHQSVEPVVMMHMNIQDSGTQPG-GVPSAPTGPLGPPGHGQTLGQQVPGFPTAPT 494
V P + I PG G+P AP PL PPG G P P
Sbjct: 1192 GV-----GIPPPPPLPGAGIPPPPPLPGMGIPPAPAPPLPPPG---------TGIPPPPL 1237
Query: 495 RVVIARPTPPQARPSHPGGPPVSGTL 520
V P PQ S P V G L
Sbjct: 1238 LPVSGPPLLPQVGSSTLPTPQVCGFL 1263
Score = 33.1 bits (74), Expect = 1.5
Identities = 23/74 (31%), Positives = 26/74 (35%), Gaps = 6/74 (8%)
Query: 196 PPPQPPAVTPEPVALSSQTSEPVES----EAPPREPMEAEEVEERAPAQNPELTPGPAPA 251
PPP P A P P L P PP P+ + P + P PAP
Sbjct: 1165 PPPLPGAGIPPPPPLPGVGIPPPPPLPGVGIPPPPPLPGAGIPPPPPLPGMGIPPAPAP- 1223
Query: 252 GPTPAPETNAPNHP 265
P P P T P P
Sbjct: 1224 -PLPPPGTGIPPPP 1236
Score = 32.7 bits (73), Expect = 2.0
Identities = 29/100 (29%), Positives = 39/100 (39%), Gaps = 15/100 (15%)
Query: 585 PAQPPP--TPQPSMADLQFSQLLGNLLGPAGPGAGGSGVASPTITVAMPGVPAFLQGMTD 642
PA PP +PQP F L LLGP+G G+G A + P L ++D
Sbjct: 232 PAAPPTAVSPQPGA----FLGLDRFLLGPSG----GAGEAPGS-----PDTEQALSALSD 278
Query: 643 FLQATQTAPPPPPPPPPPPPAPEQQTMPPPGSPSGGAGSP 682
++ P P PP P P + P + SP
Sbjct: 279 LPESLAAEPREPQQPPSPGGLPVSEAPSLPAAQPAAKDSP 318
Score = 32.3 bits (72), Expect = 2.6
Identities = 44/176 (25%), Positives = 64/176 (36%), Gaps = 28/176 (15%)
Query: 937 VGDPPQPLPEEPMEVQGAERASPEPQRENAS-PAPGTTAEEAMSRGPPPAPEGGSRDEQD 995
+ D P+ L EP E Q P E S PA A+++ S P PE G +E
Sbjct: 276 LSDLPESLAAEPREPQQPPSPGGLPVSEAPSLPAAQPAAKDSPSSTAFPFPEAGPGEEAA 335
Query: 996 GA--------SAETEPWAAAVPP------EWVPIIQQDIQSQRKVKPQPPL------SDA 1035
GA E E A P EW P + +D + +P+ + A
Sbjct: 336 GAPVRGAGDTDEEGEEDAFEDAPRGSPGEEWAPEVGEDAPQRLGEEPEEEAQGPDAPAAA 395
Query: 1036 YLSGMPAKRRKTMQGEGPQLLLS----EAVSRAAKAAGARPLTSPESLSRDLEAPE 1087
L G PA ++ + P L++ + +R + P SP R PE
Sbjct: 396 SLPGSPAPSQRCFK---PYPLITPCYIKTTTRQLSSPNHSPSQSPNQSPRIKRRPE 448
Score = 32.0 bits (71), Expect = 3.4
Identities = 28/99 (28%), Positives = 35/99 (35%), Gaps = 14/99 (14%)
Query: 611 PAGPGAGGSGVASPTITVAMPGVPAFLQGMTDFLQATQTAPPPPPPPPPPPPAPEQQTMP 670
P PGA +++ P + D Q TQ+ PPPPP
Sbjct: 768 PCPPGAESGPQTKFCSEISLIVSPRRISVQLDSHQPTQSISQPPPPPSL----------- 816
Query: 671 PPGSPSGGAGSPGGLGLESLSPEFFTSVVQGVLSSLLGS 709
S G G PG S+S EF TS V S+ S
Sbjct: 817 ---LWSAGQGQPGSQPPHSISTEFQTSHEHSVSSAFKNS 852
>gi|116008152 alpha 1 type XV collagen precursor [Homo sapiens]
Length = 1388
Score = 74.7 bits (182), Expect = 5e-13
Identities = 89/356 (25%), Positives = 125/356 (35%), Gaps = 55/356 (15%)
Query: 400 GPGQASSVAPSSTNVESSAEGAPPPGPAPPPATSHPRVIRISHQSVEPVVMMHMNIQDSG 459
GPG +A ++T G G PP P + + P H+ ++
Sbjct: 502 GPGDEEDLAAATTEEPLITAGGEESGSPPPDGPPLPLPTVAPERWITPAQREHVGMK--- 558
Query: 460 TQPGGVPSAPTGPLGPPGHGQTLGQQVPGFPTAPTRVVIARPTPPQARPSHPGGPPVSGT 519
G GP G G+++PG PP+ PS P GP
Sbjct: 559 -----------GQAGPKGEKGDAGEELPG--------------PPE--PSGPVGPTAGAE 591
Query: 520 LQGAGLGTNASLAQMVSGLVG--QLLMQPVLVAQGTPGMAPPPAPATASASAGTTNTATT 577
+G+GLG + + LVG QLL +G PG PP P G T
Sbjct: 592 AEGSGLGWGSDVGSGSGDLVGSEQLL-------RGPPG---PPGPPGLPGIPGKPGTDVF 641
Query: 578 AGPAPGGPAQPPPTPQPSMADLQFSQLLGNLLGPAGPGAGGSGVASPTITVAMPGVPAFL 637
GP PG P + P +P + + G G G G P +V G P
Sbjct: 642 MGP-PGSPGEDGPAGEPGPPGPEGQPGVDGATGLPGM-KGEKGARGPNGSVGEKGDPG-N 698
Query: 638 QGMTDFLQATQTAPPPPPPPPPPPPAPEQQTMPPPGSPSGGAGSPGGLGLESLSPEFFTS 697
+G+ A PP PP PP PPG P G G GLG E T
Sbjct: 699 RGLPGPPGKKGQAGPPGVMGPPGPPG-------PPGPP--GPGCTMGLGFEDTEGSGSTQ 749
Query: 698 VV-QGVLSSLLGSLGARAGSSESIAAFIQRLSGSSNIFEPGADGALGFFGALLSLL 752
++ + LS ++G + + + + G+S + PG G G L + L
Sbjct: 750 LLNEPKLSRPTAAIGLKGEKGDRGPKGERGMDGASIVGPPGPRGPPGHIKVLSNSL 805
Score = 52.4 bits (124), Expect = 2e-06
Identities = 81/323 (25%), Positives = 111/323 (34%), Gaps = 52/323 (16%)
Query: 394 AEAP--PPGPGQASSVAPSSTNVESSAEGAPPPGPAPPPATSHPRVIRISHQSVEPVVMM 451
AE P G +ASSV + S E P G P P + R+ + E + M
Sbjct: 365 AEVPISTAGEAEASSVPTGGPTLSMSTEN-PEEGVTPGP-DNEERLAATAAGEAEALASM 422
Query: 452 HMNIQDSGTQPGGVPSAPTGPLGPPGHGQTLGQQVPGFPTAPTRVVIARPTPPQARPSHP 511
++ SG PG + + + Q+LG++ P++ + A + +
Sbjct: 423 PGEVEASGVAPGELDLSMS--------AQSLGEEATVGPSSEDSLTTAAAATEVSLSTFE 474
Query: 512 GGPPVSGTLQGAGLGTNASLAQMVSGLVGQLLMQPVLVAQGTPGMAPPPAPATASASAGT 571
+ +G+ T+ LA + + M P PG A AT T
Sbjct: 475 DE-------EASGVPTD-GLAPLTA------TMAPERAVTSGPGDEEDLAAATTEEPLIT 520
Query: 572 TNTATTAGPAPGGPAQPPPTPQPSMADLQFSQLLGNLLGPAGP----GAGG--------- 618
+ P P GP P PT P + + G AGP G G
Sbjct: 521 AGGEESGSPPPDGPPLPLPTVAPERWITPAQREHVGMKGQAGPKGEKGDAGEELPGPPEP 580
Query: 619 SGVASPTITVAMPGV-----PAFLQGMTDFLQATQTAPPPPPPPPPP-----PPAPEQQT 668
SG PT G G D + + Q PP PP PP P P
Sbjct: 581 SGPVGPTAGAEAEGSGLGWGSDVGSGSGDLVGSEQLLRGPPGPPGPPGLPGIPGKPGTDV 640
Query: 669 -MPPPGSP--SGGAGSPGGLGLE 688
M PPGSP G AG PG G E
Sbjct: 641 FMGPPGSPGEDGPAGEPGPPGPE 663
Score = 50.8 bits (120), Expect = 7e-06
Identities = 71/272 (26%), Positives = 88/272 (32%), Gaps = 65/272 (23%)
Query: 461 QPG--GVPSAPTGPLGPPGHGQTLGQQVPGFPTAP----------TRVVIARPTPPQARP 508
+PG G P P GP GPPGH G +PG P P VI + P P
Sbjct: 883 EPGMHGAPG-PMGPKGPPGHKGEFG--LPGRPGRPGLNGLKGTKGDPGVIMQGPPGLPGP 939
Query: 509 SHPGGPPVSGTLQGAGLGTNASLAQMVSGLVGQLLMQP---VLVAQGTPGMAPPPAPATA 565
P GPP GA + + G + + ++P + V PG
Sbjct: 940 PGPPGPP------GAVIN--------IKGAIFPIPVRPHCKMPVDTAHPGSPELITFHGV 985
Query: 566 SASAGTTNTATTAGPAPGGPAQPPPTPQPSMADLQFSQLLGNLLG--------------- 610
G+ + G AQ PP P +A L+ L NL G
Sbjct: 986 KGEKGSWGLPGSKGEKGDQGAQGPPGPPLDLAYLR--HFLNNLKGENGDKGFKGEKGEKG 1043
Query: 611 --------------PAGPGAGGSGVASPTITVAMPGVPAFLQGMTDFLQATQTAPPPPP- 655
P PG G + PG P L G F + PP PP
Sbjct: 1044 DINGSFLMSGPPGLPGNPGPAGQKGETVVGPQGPPGAPG-LPGPPGFGRPGDPGPPGPPG 1102
Query: 656 PPPPPPPAPEQQTMPPPGSPSGGAGSPGGLGL 687
PP PP +P P P G G PG L
Sbjct: 1103 PPGPPAILGAAVALPGPPGPPGQPGLPGSRNL 1134
Score = 47.8 bits (112), Expect = 6e-05
Identities = 80/323 (24%), Positives = 95/323 (29%), Gaps = 61/323 (18%)
Query: 388 PPPTPNAEAPPPGPGQASSVAPSSTNVESSAEGAP-PPGPAPPP----ATSHPRVIRISH 442
PP P P PG + P + E G P PPGP P AT P +
Sbjct: 623 PPGPPGLPGIPGKPGTDVFMGPPGSPGEDGPAGEPGPPGPEGQPGVDGATGLPGM----- 677
Query: 443 QSVEPVVMMHMNIQDSGTQPGGVPSAPTGPLGPPGHGQTLGQQVPGFPTAPTRVVIARPT 502
G + P+ G G PG+ G P P + A P
Sbjct: 678 ---------------KGEKGARGPNGSVGEKGDPGN--------RGLPGPPGKKGQAGPP 714
Query: 503 PPQARPSHPG--GPPVSGTLQGAGLGTNASLAQMVSGLVGQLLMQPVL----VAQGTPGM 556
P PG GPP G G G QLL +P L A G G
Sbjct: 715 GVMGPPGPPGPPGPPGPGCTMGLGFEDTEGSGST------QLLNEPKLSRPTAAIGLKGE 768
Query: 557 APPPAPATASASAGTTNTATTAGPAPGGPAQPPPTPQPSMAD-----LQFSQLLGNLLGP 611
P G + P P GP S+ + + FS + L+GP
Sbjct: 769 KGDRGP---KGERGMDGASIVGPPGPRGPPGHIKVLSNSLINITHGFMNFSD-IPELVGP 824
Query: 612 AGPGA-----GGSGVASPTITVAMPGVPAFL--QGMTDFLQATQTAPPPPPPPPPPPPAP 664
GP G G P +PG P QG A T P P
Sbjct: 825 PGPDGLPGLPGFPGPRGPKGDTGLPGFPGLKGEQGEKGEPGAILTEDIPLERLMGKKGEP 884
Query: 665 EQQTMPPPGSPSGGAGSPGGLGL 687
P P P G G G GL
Sbjct: 885 GMHGAPGPMGPKGPPGHKGEFGL 907
Score = 44.3 bits (103), Expect = 7e-04
Identities = 82/343 (23%), Positives = 108/343 (31%), Gaps = 42/343 (12%)
Query: 385 GTRPPPTPNAEAPPPG-PGQASSVAPSSTNVESSAEGAPPPG-PAPPPATSHPRVIRISH 442
G + PP E PG PG+ T + PPG P PP P +
Sbjct: 894 GPKGPPGHKGEFGLPGRPGRPGLNGLKGTKGDPGVIMQGPPGLPGPPGPPGPPGAVINIK 953
Query: 443 QSVEPV-VMMHMNIQDSGTQPGGVP-------SAPTGPLGPPGH-GQTLGQQVPGFPTAP 493
++ P+ V H + PG G G PG G+ Q G P P
Sbjct: 954 GAIFPIPVRPHCKMPVDTAHPGSPELITFHGVKGEKGSWGLPGSKGEKGDQGAQGPPGPP 1013
Query: 494 TRVVIARPTPPQARPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLVGQLLMQPVLVAQGT 553
+ R + + G G G + L GL G P Q
Sbjct: 1014 LDLAYLRHFLNNLKGEN-GDKGFKGEKGEKGDINGSFLMSGPPGLPGN----PGPAGQKG 1068
Query: 554 PGMAPPPAPATASASAGTTNTATTAGPAPGGPAQPPPTPQPSMADLQFSQLLGNLLGPAG 613
+ P P A G P P GP PP P A L + L GP G
Sbjct: 1069 ETVVGPQGPPGAPGLPGPPGFGRPGDPGPPGPPGPPGPP----AILGAAVALPGPPGPPG 1124
Query: 614 -PGAGGSGVASPTIT----------VAMPGVPAFLQGMTDF----------LQATQTAP- 651
PG GS + + + G +L+ T+F LQ + P
Sbjct: 1125 QPGLPGSRNLVTAFSNMDDMLQKAHLVIEGTFIYLRDSTEFFIRVRDGWKKLQLGELIPI 1184
Query: 652 PPPPPPPPPPPAPEQQTMPPPGSPSGGAGSPGGLGLESLSPEF 694
P PPPP + Q +PPP S L L +L+ F
Sbjct: 1185 PADSPPPPALSSNPHQLLPPPNPISSANYEKPALHLAALNMPF 1227
>gi|119829187 alpha 1 type XVII collagen [Homo sapiens]
Length = 1497
Score = 73.2 bits (178), Expect = 1e-12
Identities = 112/440 (25%), Positives = 142/440 (32%), Gaps = 120/440 (27%)
Query: 381 MTGNGTRPPPTPNAEAPPPG------------------PGQASSVAPSSTNVESSAEGAP 422
M G P P EA PPG PG SV P ++ +G P
Sbjct: 620 MGQRGREGPMGPRGEAGPPGSGEKGERGAAGEPGPHGPPGVPGSVGPKGSSGSPGPQGPP 679
Query: 423 -------------------------PPGPAPPPATSHPRVIRISHQSVEPVVMMHMNIQD 457
PPGP PR + + EP + +
Sbjct: 680 GPVGLQGLRGEVGLPGVKGDKGPMGPPGPKGDQGEKGPRGL-----TGEPGMR---GLPG 731
Query: 458 SGTQPGGVPSAPTGPLGPPGHGQTLGQQ----------VPGFPTAPTRVVIARPTPPQAR 507
+ +PG GP GP GH G+Q PG P + + P PQ
Sbjct: 732 AVGEPGA--KGAMGPAGPDGHQGPRGEQGLTGMPGIRGPPGPSGDPGKPGLTGPQGPQGL 789
Query: 508 PSHPGGPPVSGTLQGAG--LGTNASLAQMVSGLVGQLLMQPVLVAQGTPGMAPPPAPATA 565
P PG P + G G + + S V G G A G PG P PA
Sbjct: 790 PGTPGRPGIKGEPGAPGKIVTSEGSSMLTVPGPPGPP------GAMGPPGPPGAPGPAGP 843
Query: 566 SASAGTTNTATTAGPAPGGPAQPPPTPQPSMADLQFSQLLGNLLGPAGP-GAGGSGVASP 624
+ G GP GP P P PS+ GP GP G G G+ P
Sbjct: 844 AGLPGHQEVLNLQGPP--GPPGPRGPPGPSIP------------GPPGPRGPPGEGLPGP 889
Query: 625 TITVAMPGVPAFLQGMTDFLQATQTAPPPPPPPPPPPPAPEQQTMPPPGSPSGGAGSPGG 684
PG P FL ++T PP PP PP Q PPG P G G G
Sbjct: 890 ------PGPPG------SFLSNSETFLSGPPGPPGPPGPKGDQ--GPPG-PRGHQGEQGL 934
Query: 685 LGLESLSPEFFTSVVQGVLS--------------SLLGSLGARAGSSESIAAFIQRLSGS 730
G + F +QG + G+LG +G SE ++ +SG
Sbjct: 935 PGFSTSGSSSFGLNLQGPPGPPGPQGPKGDKGDPGVPGALGIPSGPSEGGSSSTMYVSG- 993
Query: 731 SNIFEPGADGALGFFGALLS 750
PG G G G++ S
Sbjct: 994 ----PPGPPGPPGPPGSISS 1009
Score = 70.1 bits (170), Expect = 1e-11
Identities = 106/437 (24%), Positives = 156/437 (35%), Gaps = 96/437 (21%)
Query: 385 GTRPPPTPNAEAPPPGPG--QASSVAPSSTNVESSAEGAPPPGPAPPPATSHPRVIRISH 442
G PP P + PPGP Q P + SS+ G GP PP P+
Sbjct: 909 GPPGPPGPKGDQGPPGPRGHQGEQGLPGFSTSGSSSFGLNLQGPPGPPGPQGPK-----G 963
Query: 443 QSVEPVVMMHMNIQDSGTQPGGV--------PSAPTGPLGPPGHGQTLGQQVPGFPTAPT 494
+P V + I SG GG P P GP GPPG + GQ++ + +
Sbjct: 964 DKGDPGVPGALGIP-SGPSEGGSSSTMYVSGPPGPPGPPGPPGSISSSGQEIQQYISEYM 1022
Query: 495 RVVIARP--TPPQARPSHPGGPPVSGTLQGAGLGTNASLAQMVSGL-------------- 538
+ R + Q P PG P T+ G + + +VS L
Sbjct: 1023 QSDSIRSYLSGVQGPPGPPGPPGPVTTITGETFDYSELASHVVSYLRTSGYGVSLFSSSI 1082
Query: 539 -------------VGQLLMQPVLVAQGTPGMAPPPAPAT--------ASASAGTTNTATT 577
V Q L Q ++ +G PG PP A A S+ + ++
Sbjct: 1083 SSEDILAVLQRDDVRQYLRQYLMGPRGPPG--PPGASGDGSLLSLDYAELSSRILSYMSS 1140
Query: 578 AGPAPGGPAQPPPTPQPSMADLQFSQLLGNLLGPAGPGAGGSGVASPTITVAMPGVPA-- 635
+G + G P P P P + + +LL L G+ G+ P PG+P
Sbjct: 1141 SGISIGLPGPPGP---PGLPGTSYEELLSLL-----RGSEFRGIVGPPGPPGPPGIPGNV 1192
Query: 636 ----FLQGMTDFLQATQTAPPPPPPPPPPPPAPEQQTMPPPGSPSGGAGSPGGLGLESLS 691
++ ++ +L + P PP PP PP P PPG SG + +S
Sbjct: 1193 WSSISVEDLSSYLHTAGLSFIPGPPGPPGPPGPR----GPPG-VSGALATYAAENSDSFR 1247
Query: 692 PEFFTSVVQ-GVLSSLLGSLG--------------------ARAGSSESIAAFIQRLSGS 730
E + + V S ++G G +R SS S ++ ++R S
Sbjct: 1248 SELISYLTSPDVRSFIVGPPGPPGPQGPPGDSRLLSTDASHSRGSSSSSHSSSVRRGSSY 1307
Query: 731 SNIFEPGADGALGFFGA 747
S+ G GA G GA
Sbjct: 1308 SSSMSTGGGGA-GSLGA 1323
Score = 34.7 bits (78), Expect = 0.52
Identities = 50/208 (24%), Positives = 64/208 (30%), Gaps = 31/208 (14%)
Query: 504 PQARPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLVGQLLMQPVLVAQGTPGMAPPPAPA 563
P+ PG P + G L G + G VG M+ + +G G P A
Sbjct: 580 PKGDRGFPGTPGIPGPLGHPG----PQGPKGQKGSVGDPGMEGPMGQRGREGPMGPRGEA 635
Query: 564 TASASAGTTNTATTAGPAPGGPAQPP-----------PTPQPSMADLQFSQLLGNL---- 608
S P P GP P P PQ + L G +
Sbjct: 636 GPPGSGEKGERGAAGEPGPHGPPGVPGSVGPKGSSGSPGPQGPPGPVGLQGLRGEVGLPG 695
Query: 609 -------LGPAGPGAGGSGVASPTITVAMPGVPAFLQGMTDFLQATQTAPPPPPPPPPPP 661
+GP GP G G P PG+ + + + A P P
Sbjct: 696 VKGDKGPMGPPGP-KGDQGEKGPRGLTGEPGMRGLPGAVGE--PGAKGAMGPAGPDGHQG 752
Query: 662 PAPEQQTMPPPG--SPSGGAGSPGGLGL 687
P EQ PG P G +G PG GL
Sbjct: 753 PRGEQGLTGMPGIRGPPGPSGDPGKPGL 780
Score = 32.7 bits (73), Expect = 2.0
Identities = 53/195 (27%), Positives = 70/195 (35%), Gaps = 41/195 (21%)
Query: 85 VERAPPQTHLPSGASSGTGSASATHGGGSPPGTRGP-GASV-----HDRNANSYVMVGTF 138
V R + S G GS A G G RGP G + + A + G
Sbjct: 1301 VRRGSSYSSSMSTGGGGAGSLGAGGAFGEAAGDRGPYGTDIGPGGGYGAAAEGGMYAGNG 1360
Query: 139 NLPSDGSAVDVHINMEQAPIQSEPRVRLVMAQHMIRDIQTLLSRMECRGGPQPQHSQPPP 198
L A D+ N E A SE R + Q M +Q GP QP P
Sbjct: 1361 GLLGADFAGDLDYN-ELAVRVSESMQRQGLLQGMAYTVQ----------GPP---GQPGP 1406
Query: 199 Q-PPAVTPEPVALSSQTSEPVESEAPPREPMEAEEVEERAPAQNPEL-TPGP----APAG 252
Q PP ++ A S+ T++ ++ + + P Q E+ TPGP PAG
Sbjct: 1407 QGPPGISKVFSAYSNVTADLMDF-------FQTYGAIQGPPGQKGEMGTPGPKGDRGPAG 1459
Query: 253 PTPAPETNAPNHPSP 267
P P HP P
Sbjct: 1460 P--------PGHPGP 1466
>gi|153792074 proline rich 12 [Homo sapiens]
Length = 2036
Score = 73.2 bits (178), Expect = 1e-12
Identities = 87/312 (27%), Positives = 110/312 (35%), Gaps = 61/312 (19%)
Query: 388 PPPTPNAEAPPPGPGQASSVAPSSTNV------ESSAEGAP-PPGPAPPPATSHPRVIRI 440
PPP P + P A S +PS++ V ++ +GAP PP P PPP P
Sbjct: 795 PPPPP--QLLPSVLSHAPSPSPSASKVGVHLLEPATRDGAPQPPPPPPPPPPPMP----- 847
Query: 441 SHQSVEPVVMMHMNIQDSGTQPGGVPSA---PTGPLGPPGHGQTLGQQVPGFPTAPTRVV 497
+ + +++ G +P PS P L PPG Q L + P AP
Sbjct: 848 --------LQLEAHLRSHGLEPAA-PSPRLRPEESLDPPGAMQELLGALEPLPPAPGDTG 898
Query: 498 IARPTPPQARPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLVGQLLMQ------PVLVAQ 551
+ PP + P G S + QG L + LL P +
Sbjct: 899 VG---PPNSEGKDPAGAYRSPSPQGTKAPRFVPLTSIC--FPDSLLQDEERSFFPTMEEM 953
Query: 552 GTPGMAPPPAPATASASAGTTNTATTAGPAPGGPAQPPPTPQ-PSMADLQFSQLLGNLLG 610
G A A G AGP PG PA P P P A + G
Sbjct: 954 FGGGAADDYGKAGPPEDEGDPKAG--AGPPPGPPAYDPYGPYCPGRA---------SGAG 1002
Query: 611 PAGPGAGGSGVASPTITVAMPGVPAFLQGMTDFLQATQTAPPPPPPPPPPPPAPEQQTMP 670
P PG G P + + P L A PPPPPPPPPPPAP +
Sbjct: 1003 PETPGLGLDPNKPPELPSTVNAEPLGL-----IQSGPHQAAPPPPPPPPPPPAPASE--- 1054
Query: 671 PPGSPSGGAGSP 682
P GG SP
Sbjct: 1055 ----PKGGLTSP 1062
Score = 57.0 bits (136), Expect = 1e-07
Identities = 42/137 (30%), Positives = 51/137 (37%), Gaps = 32/137 (23%)
Query: 546 PVLVAQGTPGMAPPPAPATASASAGTTNTATTAGPAPGGPAQPPPTPQPSMADLQFSQLL 605
P+ A PG PPP P SA++ T P P PTPQP
Sbjct: 1423 PLAPAAAVPG--PPPLPGLPSANSNGTPEPPLLEEKPPPTPPPAPTPQPQ---------- 1470
Query: 606 GNLLGPAGPGAGGSGVASPTITVAMPGVPAFLQGMTDFLQATQTAPPPPPPPPPPPPAPE 665
P P P A+P P + T ++PPPPP PPPPPPA
Sbjct: 1471 -----PPPP--------PPPPQPALPSPPPLVA-------PTPSSPPPPPLPPPPPPAMP 1510
Query: 666 QQTMPPPGSPSGGAGSP 682
PPP + + A P
Sbjct: 1511 SPPPPPPPAAAPLAAPP 1527
Score = 56.6 bits (135), Expect = 1e-07
Identities = 107/420 (25%), Positives = 143/420 (34%), Gaps = 100/420 (23%)
Query: 383 GNGTRPPPTPNAEAPPPGPG----QASSVAPSSTNVESSAEGAPP--------PGPAPPP 430
G PP P PPP P Q + +A SS ++ + +P PGP PPP
Sbjct: 220 GPAQTPPYRPGPPDPPPPPRHLPTQFNLLASSSAAAAAAEQSSPQLYNFSGAAPGP-PPP 278
Query: 431 ATSHPRVIRISHQSVEPVVMMHMNIQDSGTQPGGVPSAPTGPLGPPGHGQTLGQQVPG-F 489
+ PR + V+ H S P P PP H G +
Sbjct: 279 ERALPR---------QDTVIKHYQRPASAQPP---------PPPPPAHALQHYLSCGGSY 320
Query: 490 PTAPTRVVIA-------RPTPPQARPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLVG-- 540
P+ R +A P+P PS G + G G A+ G G
Sbjct: 321 PSMGHRANLACSPLGGGEPSPGAGEPSKAGPSGATAGASGRATGPEAAGGGGAGGGGGGY 380
Query: 541 -QLLMQP-VLVAQGTPGMA------PPPAPATAS---------ASAGTTNTATTAGPAPG 583
++ P +G G A PPP +TA+ A+A T A+ AG A G
Sbjct: 381 RPIIQSPGYKTGKGGYGAAAGGATRPPPPRSTATPKCQSLGGPAAAYATGKASGAGGA-G 439
Query: 584 GPAQPPPTPQPSMADLQFSQLLGNLLGPAGPGAGGSGVASPTITVAMPGVPAFLQGMTDF 643
G A P PQ LLGP G G G + ++ A P++ G
Sbjct: 440 GQAYSPGQPQ-------------GLLGPQAYGQGFGGGQAQDLSKA----PSYSGG---- 478
Query: 644 LQATQTAPPPPPPPPPPPPAPEQQTMPP---PGSPSGGAGSP------GGLGLESLSPEF 694
PP PP PPPP Q+ P G G G P GL + SP
Sbjct: 479 -------PPQPPSGPPPPGLATCQSYSPDQLQGQLYGVQGEPYPGPAAHSQGLPTASPSL 531
Query: 695 -FTSVVQGVLSSLLGSLGARA---GSSESIAAFIQRLSGSSNIFEPGADGALGFFGALLS 750
+++ LS G G + G S + I+ L P G+ G G LS
Sbjct: 532 SYSTGHSPALSGHGGGWGPSSLGGGGEASPSHIIRPLQSPPATGRPPGVGSPGAPGKYLS 591
Score = 50.8 bits (120), Expect = 7e-06
Identities = 70/262 (26%), Positives = 89/262 (33%), Gaps = 75/262 (28%)
Query: 470 TGPLGPPGHGQTLGQQVPGFPTAPTRVVIARPTPPQARPSHPGGPP-----VSGTLQ--- 521
T PL PP + VP P+ P R + +P PP A P+ P PP + G L+
Sbjct: 1304 TPPLSPP-------KSVP--PSVPARGL--QPQPP-ATPAVPHPPPSGAFGLGGALEAAE 1351
Query: 522 --GAGLGTNASLAQMVSGLVGQLLMQPVLVAQGTPGMAPPPAPATASASA---------- 569
G GLG + ++ L L P + +A + +SA
Sbjct: 1352 SEGLGLGCPSPCKRLDEELKRNLETLPSFSSDEEDSVAKNRDLQESISSAISALDDPPLA 1411
Query: 570 GTTNTATTAGPAPGGPAQPPPTPQPSMADLQFSQLLGNLLGPAGPGAGGSGVASPTITVA 629
G +T+T GP P PA P P P P P A +G P +
Sbjct: 1412 GPKDTSTPDGP-PLAPAAAVPGPPPL---------------PGLPSANSNGTPEPPLLEE 1455
Query: 630 MPGV---PAFLQGMTDFLQATQTAPPPPPPPPPP---------------PPAPEQQTMPP 671
P PA Q PPPPPPPP P PP P PP
Sbjct: 1456 KPPPTPPPA---------PTPQPQPPPPPPPPQPALPSPPPLVAPTPSSPPPPPLPPPPP 1506
Query: 672 PGSPSGGAGSPGGLGLESLSPE 693
P PS P + PE
Sbjct: 1507 PAMPSPPPPPPPAAAPLAAPPE 1528
Score = 50.4 bits (119), Expect = 9e-06
Identities = 78/343 (22%), Positives = 109/343 (31%), Gaps = 47/343 (13%)
Query: 376 GTTVTMTGNGTRPPPTPNAEAPPPGPGQASSVAPSSTNVESSAEGAPPPG---PAPPPAT 432
G T +G T P A G G + GA G P PP +T
Sbjct: 353 GATAGASGRATGPEAAGGGGAGGGGGGYRPIIQSPGYKTGKGGYGAAAGGATRPPPPRST 412
Query: 433 SHPRVIRISHQSVEPVVMMHMNIQDSGTQPGG----VPSAPTGPLGPPGHGQTLGQQVPG 488
+ P+ QS+ + + SG G P P G LGP +GQ G
Sbjct: 413 ATPKC-----QSLGGPAAAYATGKASGAGGAGGQAYSPGQPQGLLGPQAYGQ-------G 460
Query: 489 FPTAPTRVVIARPTPPQARPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLVGQLLMQPVL 548
F + + P+ P P GPP G + Q+ G+ G+ P
Sbjct: 461 FGGGQAQDLSKAPSYSGGPPQPPSGPPPPGLATCQSYSPDQLQGQLY-GVQGEPYPGPAA 519
Query: 549 VAQGTPGMAPPPAPATASASA----------------GTTNTATTAGPAPGGPA--QPPP 590
+QG P +P + +T + A G + + P PA +PP
Sbjct: 520 HSQGLPTASPSLSYSTGHSPALSGHGGGWGPSSLGGGGEASPSHIIRPLQSPPATGRPPG 579
Query: 591 TPQPSMADLQFSQLLGNLLGPAGPGAGG--------SGVASPTITVAMP-GVPAFLQGMT 641
P S +L + A PGAG G + +A P G PA
Sbjct: 580 VGSPGAPGKYLSSVLASAPFLAPPGAGSYAAGAGGYKGKGDGSELLAGPGGPPAERTEDE 639
Query: 642 DFLQATQTAPPPPPPPPPPPPAPEQQTMPPPGSPSGGAGSPGG 684
+FL P PP + GG+G GG
Sbjct: 640 EFLIQHLLQAPSPPRTSGADGLVGEDGAADASKGLGGSGGAGG 682
Score = 47.0 bits (110), Expect = 1e-04
Identities = 85/358 (23%), Positives = 120/358 (33%), Gaps = 47/358 (13%)
Query: 399 PGPGQA--SSVAPSSTNVESSAEGAPPPGPAPPPATSHPRVIRISHQS----------VE 446
PGP + S P S+ SS+ + PA + P +S Q +
Sbjct: 125 PGPTELFISGALPGSSTFPSSSALSAYQHPASFGSRPFPVPSSLSLQDPPFSPPANGLLS 184
Query: 447 PVVMMHMNIQDSGTQPGGVPS---APTGPLGPPGHGQTLGQQVPGFPTAPTRVVIARPTP 503
P ++H+ + T P + A G LGP G G Q P + P P P
Sbjct: 185 PHDVLHLKPSQAPTVPSSLGFERLAGGGVLGPAGLGPA---QTPPYRPGPPDP----PPP 237
Query: 504 PQARPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLVGQLLMQPVLVAQGT-------PGM 556
P+ P+ S A ++ L G + L Q T P
Sbjct: 238 PRHLPTQFNLLASSSAAAAAAEQSSPQLYNFSGAAPGPPPPERALPRQDTVIKHYQRPAS 297
Query: 557 A-PPPAPATASA-----SAGTT-----NTATTAGPAPGGPAQPPPTPQPSMADLQFSQL- 604
A PPP P A A S G + + A A GG P +PS A +
Sbjct: 298 AQPPPPPPPAHALQHYLSCGGSYPSMGHRANLACSPLGGGEPSPGAGEPSKAGPSGATAG 357
Query: 605 -LGNLLGPAGPGAGGSGVASPTITVAMPGVPAFLQGMTDFLQATQTAPPPPPPPPPPPPA 663
G GP G GG+G + P + G + A A PPPP P
Sbjct: 358 ASGRATGPEAAGGGGAGGGGGGYRPIIQS-PGYKTGKGGYGAAAGGATRPPPPRSTATPK 416
Query: 664 PEQQTMPPPGSPSGGAGSPGGLGLESLSPEFFTSVVQGVLSSLLGSLGARAGSSESIA 721
+ P +G A GG G ++ SP QG+L G G ++ ++
Sbjct: 417 CQSLGGPAAAYATGKASGAGGAGGQAYSP----GQPQGLLGPQAYGQGFGGGQAQDLS 470
Score = 45.1 bits (105), Expect = 4e-04
Identities = 23/67 (34%), Positives = 28/67 (41%)
Query: 189 PQPQHSQPPPQPPAVTPEPVALSSQTSEPVESEAPPREPMEAEEVEERAPAQNPELTPGP 248
PQP PPPQP +P P+ + +S P PP P PA P P
Sbjct: 1469 PQPPPPPPPPQPALPSPPPLVAPTPSSPPPPPLPPPPPPAMPSPPPPPPPAAAPLAAPPE 1528
Query: 249 APAGPTP 255
PA P+P
Sbjct: 1529 EPAAPSP 1535
Score = 44.3 bits (103), Expect = 7e-04
Identities = 71/304 (23%), Positives = 93/304 (30%), Gaps = 35/304 (11%)
Query: 374 NVGTTVTMTGNGTRPPPTPNAEAPPPGPGQASSVAPSSTNVESSAEGAPPPGPAPPPATS 433
+V +V G +PP TP PPP A + E G P P
Sbjct: 1312 SVPPSVPARGLQPQPPATPAVPHPPPSGAFGLGGALEAAESEGLGLGCPSPCKRLDEELK 1371
Query: 434 HPRVIRISHQS-VEPVVMMHMNIQDS------------------GTQPGGVPSAPTGPL- 473
S S E V + ++Q+S + P G P AP +
Sbjct: 1372 RNLETLPSFSSDEEDSVAKNRDLQESISSAISALDDPPLAGPKDTSTPDGPPLAPAAAVP 1431
Query: 474 GPPGHGQTLGQQVPGFPTAPTRVVIARPTPPQARPSHPGGPPVSGTLQGAGLGTNASLAQ 533
GPP G P P PTPP A P PP Q A +A
Sbjct: 1432 GPPPLPGLPSANSNGTPEPPLLEEKPPPTPPPAPTPQPQPPPPPPPPQPALPSPPPLVAP 1491
Query: 534 MVSGLVGQLLMQPVLVAQGTPGMAPPPAPATASASAGTTNTATTAGPAPGGPAQPPPTPQ 593
S P L P M PP P +A+ A P+P P P P
Sbjct: 1492 TPSSPP-----PPPLPPPPPPAMPSPPPPPPPAAAPLAAPPEEPAAPSPEDPELPDTRPL 1546
Query: 594 PSMADLQFSQLLGNLLGPAGPGAGGSGV--ASPTITVAMPGVPAFLQGMTDFLQATQTAP 651
+ + + G AG +GG G+ + +P+ A QT
Sbjct: 1547 HLAKKQETAAVCGETDEEAGE-SGGEGIFRERDEFVIRAEDIPS-------LKLALQTGR 1598
Query: 652 PPPP 655
PPP
Sbjct: 1599 EPPP 1602
Score = 43.1 bits (100), Expect = 0.001
Identities = 80/361 (22%), Positives = 108/361 (29%), Gaps = 52/361 (14%)
Query: 187 GGPQPQ--HSQPPPQPPAVTPEPVALSSQTSEPVESEAPPREPMEAEEVEERAPAQNPEL 244
G P+P +PPP PP P P P + P P+ A P P
Sbjct: 1446 GTPEPPLLEEKPPPTPP-PAPTPQPQPPPPPPPPQPALPSPPPLVAPTPSSPPPPPLPPP 1504
Query: 245 TPGPAPAGPTPAPETNAPNHPSPAEYVEVLQELQRLESRLQPFLQRYYEVLGAAATTDYN 304
P P+ P P P AP P E E L L + E TD
Sbjct: 1505 PPPAMPSPPPPPPPAAAPLAAPPEEPAAPSPEDPELPDTRPLHLAKKQETAAVCGETDEE 1564
Query: 305 NNHEG-----REEDQRLINLVG-ESLRLLGNT---------------------------- 330
G RE D+ +I SL+L T
Sbjct: 1565 AGESGGEGIFRERDEFVIRAEDIPSLKLALQTGREPPPIWRVQKALLQKFTPEIKDGQRQ 1624
Query: 331 FVALSDLRCNLACTPPRHLHV-VRPMSHYTTPMVLQQAAIPIQINVGTTVTMTGNGTRPP 389
F A S+ R+ + V+ + + ++ A V +G P
Sbjct: 1625 FCATSNYLGYFGDAKNRYQRLYVKFLENVNKKDYVRVCARKPWHRPPVPVRRSGQAKNPV 1684
Query: 390 PTPNAEAPPP-GPG-QASSVAPSSTNVESSAEGAPPPGPAPPPATSHPRVIRISHQSVEP 447
+ APPP P P T E E P PPA P ++R + E
Sbjct: 1685 SAGGSSAPPPKAPAPPPKPETPEKTTSEKPPEQTPETAMPEPPAPEKPSLLRPVEKEKEK 1744
Query: 448 VVMMHMNIQDSGTQPGGVPSAPTGPLGPPGHGQTLGQQVPGFPTAPTRVVIARPTPPQAR 507
+ G +P A +G P GQ A +R+ ARPT +A
Sbjct: 1745 EKVTR------GERPLRGERATSGRQTRPERSLATGQ------PATSRLPKARPTKVKAE 1792
Query: 508 P 508
P
Sbjct: 1793 P 1793
Score = 42.7 bits (99), Expect = 0.002
Identities = 55/221 (24%), Positives = 81/221 (36%), Gaps = 50/221 (22%)
Query: 238 PAQNPELTPGPAPAG---PTPAPETNAPNHPSPAEYVEVLQELQRLES------------ 282
P P+ P PA P P P T A HP P+ + L+ ES
Sbjct: 1306 PLSPPKSVPPSVPARGLQPQP-PATPAVPHPPPSGAFGLGGALEAAESEGLGLGCPSPCK 1364
Query: 283 RLQPFLQRYYEVLGAAATTDYNNNHEGREEDQRLINLVGESLRLLGNTFVALSDLRCNLA 342
RL L+R E L + ++ + ++ + R+ + + + + AL D
Sbjct: 1365 RLDEELKRNLETLPSFSSDEEDSVAKNRDLQESISSAIS-----------ALDD------ 1407
Query: 343 CTPPRHLHVVRPMSHYTTPMVLQQAAIPIQINVGTTVTMTGNGT--------RPPPTPNA 394
PP L + S P + AA+P + + NGT +PPPTP
Sbjct: 1408 --PP--LAGPKDTSTPDGPPLAPAAAVPGPPPLPGLPSANSNGTPEPPLLEEKPPPTPPP 1463
Query: 395 EA-----PPPGPGQASSVAPSSTNVESSAEGAPPPGPAPPP 430
PPP P PS + + +PPP P PPP
Sbjct: 1464 APTPQPQPPPPPPPPQPALPSPPPLVAPTPSSPPPPPLPPP 1504
Score = 38.5 bits (88), Expect = 0.036
Identities = 39/143 (27%), Positives = 48/143 (33%), Gaps = 17/143 (11%)
Query: 187 GGPQPQHSQPPPQPPAVTPEPVALSSQTSEPV---------ESEAPP---REPMEAEEVE 234
G PQP PPP PP L S EP ES PP +E + A E
Sbjct: 831 GAPQPPPPPPPPPPPMPLQLEAHLRSHGLEPAAPSPRLRPEESLDPPGAMQELLGALEPL 890
Query: 235 ERAPAQ---NPELTPGPAPAGPTPAPETNAPNHPSPAEYVEVLQELQRLESRLQPFLQRY 291
AP P + G PAG +P P + L+ + F
Sbjct: 891 PPAPGDTGVGPPNSEGKDPAGAYRSPSPQGTKAPRFVPLTSICFPDSLLQDEERSFFPTM 950
Query: 292 YEVLGAAATTDYNNNHEGREEDQ 314
E+ G A DY G ED+
Sbjct: 951 EEMFGGGAADDYGK--AGPPEDE 971
Score = 37.4 bits (85), Expect = 0.081
Identities = 29/86 (33%), Positives = 35/86 (40%), Gaps = 16/86 (18%)
Query: 188 GPQPQHSQPPPQPPAVTPEPVALSSQTSEP--VESEAPPREPMEAEEVEERAPAQNPELT 245
GP + P PP + P A S+ T EP +E + PP P PA P+
Sbjct: 1421 GPPLAPAAAVPGPPPLPGLPSANSNGTPEPPLLEEKPPPTPP----------PAPTPQPQ 1470
Query: 246 PGPAPAGPTPA----PETNAPNHPSP 267
P P P P PA P AP SP
Sbjct: 1471 PPPPPPPPQPALPSPPPLVAPTPSSP 1496
Score = 36.6 bits (83), Expect = 0.14
Identities = 46/205 (22%), Positives = 70/205 (34%), Gaps = 18/205 (8%)
Query: 83 HLVER-APPQTHLPSGASSGTGSASATHG------GGSPPGTRGPGASVHDRNANSYVMV 135
HL++ +PP+T G G+A A+ G G PPGT A + + ++
Sbjct: 645 HLLQAPSPPRTSGADGLVGEDGAADASKGLGGSGGAGGPPGTPYELAKEDPQRYHLQSVI 704
Query: 136 GTFNLPSDGSAVDVHINMEQAPIQSEPRVRLVMAQHMIRDIQTLLSRMECRGGPQPQHSQ 195
T +G+ + + + + + + R + G Q S
Sbjct: 705 RTSASLDEGATAALELGLGRLKEKKKGPERGGETPEGLATSVVHYGAGAKELGAFLQKSP 764
Query: 196 PPPQPPA--VTPEPVALSSQTSEP-VESEAPPREPMEAEEVEERAPAQNPE--------L 244
PPP P A P P L + P + PP P V AP+ +P L
Sbjct: 765 PPPPPTAQSTQPTPHGLLLEAGGPDLPLVLPPPPPQLLPSVLSHAPSPSPSASKVGVHLL 824
Query: 245 TPGPAPAGPTPAPETNAPNHPSPAE 269
P P P P P P P +
Sbjct: 825 EPATRDGAPQPPPPPPPPPPPMPLQ 849
Score = 32.3 bits (72), Expect = 2.6
Identities = 24/71 (33%), Positives = 27/71 (38%), Gaps = 25/71 (35%)
Query: 385 GTRPPPTPNAEAP--PPGPGQASSVAP----------------SSTNVESSA-------E 419
G PPP P A P P PG+AS P S+ N E +
Sbjct: 977 GAGPPPGPPAYDPYGPYCPGRASGAGPETPGLGLDPNKPPELPSTVNAEPLGLIQSGPHQ 1036
Query: 420 GAPPPGPAPPP 430
APPP P PPP
Sbjct: 1037 AAPPPPPPPPP 1047
Score = 31.2 bits (69), Expect = 5.8
Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
Query: 649 TAPPPPPP-PPPPPPAPEQQT--MPPPGSPSGGAGSP 682
+APPP P PPP P PE+ T PP +P P
Sbjct: 1690 SAPPPKAPAPPPKPETPEKTTSEKPPEQTPETAMPEP 1726
Score = 30.8 bits (68), Expect = 7.6
Identities = 22/66 (33%), Positives = 27/66 (40%), Gaps = 7/66 (10%)
Query: 634 PAFLQGMTDFLQATQTAPPPPPPP--PPPPPAPEQQTMPPPGSPSGGAGS-----PGGLG 686
P + G+T L ++ PP P P PPA PPP G G+ GLG
Sbjct: 1297 PLYQAGLTPPLSPPKSVPPSVPARGLQPQPPATPAVPHPPPSGAFGLGGALEAAESEGLG 1356
Query: 687 LESLSP 692
L SP
Sbjct: 1357 LGCPSP 1362
Score = 30.8 bits (68), Expect = 7.6
Identities = 37/156 (23%), Positives = 59/156 (37%), Gaps = 22/156 (14%)
Query: 933 YVRRVGDPPQPLPEEPMEVQGAERASPEPQRENASPAPGTTAEEAMSRGPPPAPEGGSR- 991
YVR P P P+ G Q +N A G++A + PPP PE +
Sbjct: 1658 YVRVCARKPWHRPPVPVRRSG--------QAKNPVSAGGSSAPPPKAPAPPPKPETPEKT 1709
Query: 992 -----DEQDGASAETEPWAAAVPPEWVPIIQQDIQSQRKVKPQPPL-SDAYLSGMPAKRR 1045
EQ +A EP A P P ++++ + ++ + + PL + SG +
Sbjct: 1710 TSEKPPEQTPETAMPEPPAPEKPSLLRP-VEKEKEKEKVTRGERPLRGERATSGRQTRPE 1768
Query: 1046 KTMQGEGPQLLLSEAVSRAAKAAGARPLTSPESLSR 1081
+++ P A SR KA + P R
Sbjct: 1769 RSLATGQP------ATSRLPKARPTKVKAEPPPKKR 1798
Score = 30.4 bits (67), Expect = 9.9
Identities = 24/74 (32%), Positives = 29/74 (39%), Gaps = 17/74 (22%)
Query: 636 FLQGMTDFLQATQTAPP-----------PPPPPPPPPPAPEQQTMPP-----PGSPSGGA 679
F+ DFL++ + PP PP PP PA Q PP P P GA
Sbjct: 1281 FMASFLDFLKSGKRHPPLYQAGLTPPLSPPKSVPPSVPARGLQPQPPATPAVPHPPPSGA 1340
Query: 680 GSPGGLGLESLSPE 693
GG LE+ E
Sbjct: 1341 FGLGG-ALEAAESE 1353
>gi|163914392 glioma tumor suppressor candidate region gene 1 [Homo
sapiens]
Length = 1560
Score = 71.2 bits (173), Expect = 5e-12
Identities = 156/648 (24%), Positives = 205/648 (31%), Gaps = 123/648 (18%)
Query: 94 LPSGASSGTGSASATHGGGSPPGTRGPGASVHDRNANSYVMVGTFNLPSDGSAVDVHINM 153
LP+ +A+A H GG + ++N + +G P G A HI +
Sbjct: 489 LPANVGGQILAAAAPHTGGQLIAN----PILTNQNLAGPLSLGPVLAPHSG-AHSAHI-L 542
Query: 154 EQAPIQSEPRVRLVMAQHMIRDIQTLLSRMECRGGPQPQHSQPPPQPPAVT--------- 204
APIQ + Q + + L+ G P SQP P PA T
Sbjct: 543 SAAPIQ--------VGQPALFQMPVSLA-----AGSLPTQSQPAPAGPAATTVLQGVTLP 589
Query: 205 PEPVALSSQTSEPVESEAPPREPMEAEEVEERAPA-QNPELTPGPAPAGPTPAPETNAPN 263
P VA+ + V+ P EA V PA Q P P P G P
Sbjct: 590 PSAVAMLNTPDGLVQPATPAAATGEAAPVLTVQPAPQAPPAVSTPLPLGLQQPQAQQPPQ 649
Query: 264 HPSPAEYVEVLQELQRLESRLQPFLQRYYE--VLG--------AAATTDYNNNHEGREED 313
P+P + Q + P L E VLG A T D +E
Sbjct: 650 APTP----QAAAPPQATTPQPSPGLASSPEKIVLGQPPSATPTAILTQDSLQMFLPQERS 705
Query: 314 QRLINLVGESLRLLGNTFVALSDLRCNLACTPPRHLHVVRPMSHYTTPMVLQQAAIPIQI 373
Q+ ++ G L + + V+ PP P A P+
Sbjct: 706 QQPLSAEGPHLSVPASVIVS----------APP--------------PAQDPAPATPVAK 741
Query: 374 NVGTTVTMTGNGTRPPPTPN--AEAPPPGPGQASSVAPSSTNVESSAEGAPPPGPAPPPA 431
G + P P P A AP GPG +SS + + P P P PP+
Sbjct: 742 GAGLGPQAPDSQASPAPAPQIPAAAPLKGPGPSSSPSLPHQAPLGDSPHLPSPHPTRPPS 801
Query: 432 TSHPRVIRISHQSVEPVVMMHMNIQDSGTQPGGVPSAPTGPLGPPGHGQTLGQQVPGFPT 491
R +S EP + Q T PG LG P PG P
Sbjct: 802 RPPSRPQSVSRPPSEPPLHPCPPPQAPPTLPGIF--VIQNQLGVPPPASNPAPTAPGPPQ 859
Query: 492 APTRVVIARPTPPQARPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLVGQLLMQPVLVAQ 551
P R P P P P PP S + A +S + QL P +Q
Sbjct: 860 PPLRPQSQPPEGPL--PPAPHLPPSSTSSAVASSSETSSRLPAPTPSDFQLQFPP---SQ 914
Query: 552 GTPGMAPPPAPATASASAGTTNTATTAGPAPGGPAQPPPT------------PQPSMADL 599
G P +P P P P P P PPP PQP
Sbjct: 915 G-PHKSPTPPPTLHLV------------PEPAAPPPPPPRTFQMVTTPFPALPQPKALLE 961
Query: 600 QFSQLLGNLLGPAGPGAGGSGVASPTIT----VAMPGVPAFLQGMTDFLQATQTAPPPPP 655
+F Q+ ++ AGG+ A T T + P + G T TAP P
Sbjct: 962 RFHQVPSGII--LQNKAGGAPAAPQTSTSLGPLTSPAASVLVSGQAP--SGTPTAPSHAP 1017
Query: 656 PPPP------PPPAPEQQ--------TMPPPGSPSGGAGSPGGLGLES 689
P P PP P + T+ + S G G P GL ES
Sbjct: 1018 APAPMAATGLPPLLPAENKAFASNLPTLNVAKAASSGPGKPSGLQYES 1065
Score = 67.4 bits (163), Expect = 7e-11
Identities = 134/566 (23%), Positives = 190/566 (33%), Gaps = 110/566 (19%)
Query: 189 PQPQHSQP----PPQPPAVTPEPVALSSQT----SEPVESEAPPREPMEAEEVEERAPAQ 240
P P +P PP+ +TP+P A + T EP P+ P + Q
Sbjct: 348 PTPIQPKPAGVLPPKLYQLTPKPFAPAGATLTIQGEPGALPQQPKAPQNLTFMAAGKAGQ 407
Query: 241 NPELTPGPAPA------GPTPAPETNA-----PNHPSPAEYVEVLQELQRLESRLQPFL- 288
N L+ PAPA PA T A P S V +L + + Q L
Sbjct: 408 NVVLSGFPAPALQANVFKQPPATTTGAAPPQPPGALSKPMSVHLLNQGSSIVIPAQHMLP 467
Query: 289 -QRYYEVLGAAATTDYNNNHEGREEDQRL----INLVGESL---------RLLGNTFVAL 334
Q + + GA A + Q+L N+ G+ L +L+ N +
Sbjct: 468 GQNQFLLPGAPAV----------QLPQQLSALPANVGGQILAAAAPHTGGQLIANPILTN 517
Query: 335 SDLRCNLACTPPRHLHVVRPMSH--------------YTTPMVLQQAAIPIQIN---VGT 377
+L L+ P H +H + P+ L ++P Q G
Sbjct: 518 QNLAGPLSLGPVLAPHSGAHSAHILSAAPIQVGQPALFQMPVSLAAGSLPTQSQPAPAGP 577
Query: 378 TVTMTGNGTRPPPTPNAEAPPPGPGQASSVAPSSTNVESSAEGAPPPGPAPPPATSHPRV 437
T G PP+ A P G P++ E++ P P PPA S P
Sbjct: 578 AATTVLQGVTLPPSAVAMLNTPD-GLVQPATPAAATGEAAPVLTVQPAPQAPPAVSTPLP 636
Query: 438 IRISHQSVEPVVMMHMNIQDSGTQPGGVPSAPTGPLGPPGHGQTLGQQVPGFPTAPTRVV 497
+ + Q QP P APT P T Q PG ++P ++V
Sbjct: 637 LGLQ--------------QPQAQQP---PQAPTPQAAAPPQATT-PQPSPGLASSPEKIV 678
Query: 498 IARPTPPQARPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLVGQLLMQPVLVAQGTPGMA 557
+ +P P A P+ T + +Q G L P V P A
Sbjct: 679 LGQP--PSATPT------AILTQDSLQMFLPQERSQQPLSAEGPHLSVPASVIVSAPPPA 730
Query: 558 PPPAPATASASAG-----TTNTATTAGPAPGGPAQPP-----PTPQPSM---ADLQFSQL 604
PAPAT A ++ + PAP PA P P+ PS+ A L S
Sbjct: 731 QDPAPATPVAKGAGLGPQAPDSQASPAPAPQIPAAAPLKGPGPSSSPSLPHQAPLGDSPH 790
Query: 605 LGN---LLGPAGPGAGGSGVASPTITVAM-----PGVPAFLQGMTDFLQATQTAPPPPPP 656
L + P+ P + V+ P + P P L G+ +Q PPP
Sbjct: 791 LPSPHPTRPPSRPPSRPQSVSRPPSEPPLHPCPPPQAPPTLPGIF-VIQNQLGVPPPASN 849
Query: 657 PPPPPPAPEQQTMPPPGSPSGGAGSP 682
P P P P Q + P P G P
Sbjct: 850 PAPTAPGPPQPPLRPQSQPPEGPLPP 875
Score = 60.1 bits (144), Expect = 1e-08
Identities = 106/440 (24%), Positives = 146/440 (33%), Gaps = 102/440 (23%)
Query: 365 QQAAIPIQINVGTTVTMTGNG----------TRPPPTPNAEAPPPGPGQASSVAPSSTNV 414
Q A + IQ N+ V T NG + P TP+ + PG SS + NV
Sbjct: 283 QGAGLVIQKNLSAAVATTLNGNSVFGGAGAASAPTGTPSGQPLAVAPGLGSSPLVPAPNV 342
Query: 415 ESSAEGAPPPGPAPPPATSHPRVIRISHQSVEPVVMMHMNIQDSGTQPGGVPSAPTGP-- 472
P P P P++ +++ + P + IQ +PG +P P P
Sbjct: 343 --ILHRTPTPIQPKPAGVLPPKLYQLTPKPFAPAGAT-LTIQG---EPGALPQQPKAPQN 396
Query: 473 -----LGPPGHGQTLGQQVPGFPTAPTRVVI-----------ARPTPPQA--RPSH---- 510
G G L GFP + + A P PP A +P
Sbjct: 397 LTFMAAGKAGQNVVLS----GFPAPALQANVFKQPPATTTGAAPPQPPGALSKPMSVHLL 452
Query: 511 ----------------------PGGPPVSGTLQGAGLGTNAS---LAQMVSGLVGQLLMQ 545
PG P V Q + L N LA GQL+
Sbjct: 453 NQGSSIVIPAQHMLPGQNQFLLPGAPAVQLPQQLSALPANVGGQILAAAAPHTGGQLIAN 512
Query: 546 PVLVAQGTPG---MAPPPAPATASASAGTTNTATTAGPAPGGPAQPPPTPQPSMADLQFS 602
P+L Q G + P AP + + SA + A P QP++ + S
Sbjct: 513 PILTNQNLAGPLSLGPVLAPHSGAHSAHILSAA------------PIQVGQPALFQMPVS 560
Query: 603 QLLGNLL-----GPAGPGAGG--SGVASPTITVAM---------PGVPAFLQGMTDFLQA 646
G+L PAGP A GV P VAM P PA G +
Sbjct: 561 LAAGSLPTQSQPAPAGPAATTVLQGVTLPPSAVAMLNTPDGLVQPATPAAATGEAAPVLT 620
Query: 647 TQTAPPPPPPPPPPPPAPEQQ--TMPPPGSPSGGAGSPGGLGLESLSPEFFTSVVQGVLS 704
Q AP PP P P QQ PP +P+ A +P SP +S + VL
Sbjct: 621 VQPAPQAPPAVSTPLPLGLQQPQAQQPPQAPTPQAAAPPQATTPQPSPGLASSPEKIVLG 680
Query: 705 SLLGSLGARAGSSESIAAFI 724
+ + +S+ F+
Sbjct: 681 QPPSATPTAILTQDSLQMFL 700
Score = 52.0 bits (123), Expect = 3e-06
Identities = 137/599 (22%), Positives = 199/599 (33%), Gaps = 132/599 (22%)
Query: 189 PQPQHSQPPPQPPAVTPEPVALSSQTSEPVESEAPPREPMEAEEVEERAPAQNPELTPGP 248
PQ S P PA + + + S AP PM A + PA+N
Sbjct: 983 PQTSTSLGPLTSPAASVLVSGQAPSGTPTAPSHAPAPAPMAATGLPPLLPAENKAFASN- 1041
Query: 249 APAGPTPAPETNAPNHPSPAEYVEVLQELQRLESRLQP-----FLQRYYEVLGAAATTDY 303
P ++ P PS +Y L L++ LQP FL+ ++ G+ DY
Sbjct: 1042 LPTLNVAKAASSGPGKPSGLQYESKLSGLKK-PPTLQPSKEACFLEHLHKHQGSVLHPDY 1100
Query: 304 NNNHEGREED-QRLI---------------NLVGE-----SLRLLGNTFVALSDLRCNL- 341
E+ RL+ + V E S +LL T L+ R L
Sbjct: 1101 KTAFPSFEDALHRLLPYHVYQGALPSPSDYHKVDEEFETVSTQLLKRTQAMLNKYRLLLL 1160
Query: 342 ----ACTPPRHLHVVRPM---SHYTTPMVLQQAA-------IPIQINVGTTVTMTGNGTR 387
+P + ++ M TT + +Q A + ++G + + G R
Sbjct: 1161 EESRRVSPSAEMVMIDRMFIQEEKTTLALDKQLAKEKPDEYVSSSRSLGLPIAASSEGHR 1220
Query: 388 PP-------PTPNAEAPPP------------GPG--------QASSVAPSSTNVESSA-- 418
P P A PP G G +ASS SS++ S+A
Sbjct: 1221 LPGHGPLSSSAPGASTQPPPHLPTKLVIRHGGAGGSPSVTWARASSSLSSSSSSSSAASS 1280
Query: 419 ----EGAPPPGPAPPPATSHPRVIRIS-----HQSVEPVVMMHMNIQDSGTQPGGVPSA- 468
E P P PP ++ RI Q ++H D QP P+
Sbjct: 1281 LDADEDGPMPSRNRPPIKTYEARSRIGLKLKIKQEAGLSKVVHNTALDPVHQPPPPPATL 1340
Query: 469 ------PTGPLGPPGHGQTLGQQVPGFPTAPTRVVIAR----PTPPQAR--------PSH 510
P P PP GQ G P AP R + P P + P
Sbjct: 1341 KVAEPPPRPPPPPPPTGQMNGTVDHPPPAAPERKPLGTAPHCPRLPLRKTYRENVGGPGA 1400
Query: 511 PGGPPVSGTLQGAGLGTNASLAQMVSGLVGQL-LMQPVLVAQGTPGMAPPPAPATASASA 569
P G P G+ A + + SGL+ +L ++ L + G PPP PA ASA+
Sbjct: 1401 PEGTPAGRARGGSPAPLPAKVDEATSGLIRELAAVEDELYQRMLKG--PPPEPA-ASAAQ 1457
Query: 570 GTTNTATTAGPAPGGPAQPPPTPQPSMADLQFSQLLGNLLGPAGPGAGGSGVASPTITVA 629
GT + A P PA+ + P + FS SP
Sbjct: 1458 GTGDPDWEAPGLP--PAKRRKSESPDVDQASFSS------------------DSPQDDTL 1497
Query: 630 MPGVPAFLQGMTDFLQATQTAPPPPPP-------PPPPPPAPEQQTMPPPGSPSGGAGS 681
+ + + + + QA P P P P PPP + PP S +GG G+
Sbjct: 1498 TEHLQSAIDSILNLQQAPGRTPAPSYPHAASAGTPASPPPLHRPEAY-PPSSHNGGLGA 1555
Score = 49.3 bits (116), Expect = 2e-05
Identities = 133/608 (21%), Positives = 186/608 (30%), Gaps = 153/608 (25%)
Query: 78 GGKVIHLVERAPPQTHLPSGASSGTGSASATHGGGSPPGTRGPGASVHDRNANSYVMVGT 137
G H++ AP Q P+ A+ + S P GP A+ V+ G
Sbjct: 535 GAHSAHILSAAPIQVGQPALFQMPVSLAAGSLPTQSQPAPAGPAATT--------VLQGV 586
Query: 138 FNLPSDGSAVDVHINMEQ--APIQSEPRVRLVMAQHMIRDIQTLLSRMECRGGPQPQHSQ 195
PS + ++ + Q P + V+ +S G QPQ Q
Sbjct: 587 TLPPSAVAMLNTPDGLVQPATPAAATGEAAPVLTVQPAPQAPPAVSTPLPLGLQQPQAQQ 646
Query: 196 PP----PQ----PPAVTPEPVALSSQTSEPVESEAPP----------------------R 225
PP PQ P A TP+P + + E + PP +
Sbjct: 647 PPQAPTPQAAAPPQATTPQPSPGLASSPEKIVLGQPPSATPTAILTQDSLQMFLPQERSQ 706
Query: 226 EPMEAEEVEERAPAQNPELTPGPA--PAGPTP----------APETNAPNHPSPAEYVEV 273
+P+ AE PA P PA PA TP AP++ A P+PA +
Sbjct: 707 QPLSAEGPHLSVPASVIVSAPPPAQDPAPATPVAKGAGLGPQAPDSQA--SPAPAPQIPA 764
Query: 274 LQELQRLESRLQPFLQRYYEVLGAAATTDYNNNHEGREEDQRLINLVGESLRLLGNTFVA 333
L+ P L + + + H R +
Sbjct: 765 AAPLKGPGPSSSPSLPHQAPL---GDSPHLPSPHPTRPPSR------------------- 802
Query: 334 LSDLRCNLACTPPRHLHVVRPMSH---YTTPMVLQQAAIPIQINVGTTVTMTGNGTRPP- 389
P R V RP S + P +P G V G PP
Sbjct: 803 ----------PPSRPQSVSRPPSEPPLHPCPPPQAPPTLP-----GIFVIQNQLGVPPPA 847
Query: 390 --PTPNAEAPPPGPGQASSVAPSSTNVESSAEGAPPPGPAPPPATSHPRVIRISHQSVEP 447
P P A PP P + S P EG PP P PP+++ V S S
Sbjct: 848 SNPAPTAPGPPQPPLRPQSQPP---------EGPLPPAPHLPPSSTSSAVASSSETSSRL 898
Query: 448 VVMMHMNIQ----------DSGTQPGGVPSAPTGPLGPPGHGQTLGQQVPGFPTAP-TRV 496
+ Q S T P + P PP +T FP P +
Sbjct: 899 PAPTPSDFQLQFPPSQGPHKSPTPPPTLHLVPEPAAPPPPPPRTFQMVTTPFPALPQPKA 958
Query: 497 VIAR----PTPPQARPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLVGQLLMQPVLVAQG 552
++ R P+ + G P T G T+ + + +VSG Q
Sbjct: 959 LLERFHQVPSGIILQNKAGGAPAAPQTSTSLGPLTSPAASVLVSG-------QAPSGTPT 1011
Query: 553 TPGMAPPPAPATA--------------SASAGTTNTATTAGPAPGGPA-----------Q 587
P AP PAP A +++ T N A A PG P+ +
Sbjct: 1012 APSHAPAPAPMAATGLPPLLPAENKAFASNLPTLNVAKAASSGPGKPSGLQYESKLSGLK 1071
Query: 588 PPPTPQPS 595
PPT QPS
Sbjct: 1072 KPPTLQPS 1079
Score = 38.1 bits (87), Expect = 0.047
Identities = 67/287 (23%), Positives = 94/287 (32%), Gaps = 63/287 (21%)
Query: 457 DSGTQPGGVPSAPTGPLGP----PGHGQTLGQQVPGFPTAPTRVVIARPTPPQARPSHPG 512
D G P G A GP PG LG Q P PT T + PPQ +
Sbjct: 138 DGGAGPTGAGGAAAVAAGPQALFPGSTDLLGLQGP--PTVLTHQALV---PPQDVVNK-- 190
Query: 513 GPPVSGTLQGAGLGTNASLAQMVSGLVGQLLMQPVLVAQGTP------------GMAPPP 560
V LQ GLG + +QP+ QG P G+AP
Sbjct: 191 ALSVQPFLQPVGLGN--------------VTLQPIPGLQGLPNGSPGGATAATLGLAPIQ 236
Query: 561 APATASASAGTTNTATTAGPAP--------GGPAQPPPTP-------------QPSMADL 599
+ T + A P GP++P Q +++
Sbjct: 237 VVGQPVMALNTPTSQLLAKQVPVSGYLASAAGPSEPVTLASAGVSPQGAGLVIQKNLSAA 296
Query: 600 QFSQLLGN-LLGPAGPGAGGSGVASPTITVAMPGVPAFLQGMTDFLQATQTAPPPPPPPP 658
+ L GN + G AG + +G S PG+ + + +T P P P
Sbjct: 297 VATTLNGNSVFGGAGAASAPTGTPSGQPLAVAPGLGSSPLVPAPNVILHRTPTPIQPKPA 356
Query: 659 PPPPAPEQQTMPPPGSPSGGA----GSPGGLGLESLSPEFFTSVVQG 701
P Q P P +P+G G PG L + +P+ T + G
Sbjct: 357 GVLPPKLYQLTPKPFAPAGATLTIQGEPGALPQQPKAPQNLTFMAAG 403
Score = 35.0 bits (79), Expect = 0.40
Identities = 46/191 (24%), Positives = 73/191 (38%), Gaps = 35/191 (18%)
Query: 90 PQTHLPSGASSGTGSASATHGGGSPPGTRGPGASVHDRNANSYVMVGTFNLPSDGSAVDV 149
P HLP+ G A GGSP T +S +++S + + DG
Sbjct: 1238 PPPHLPTKLVIRHGGA-----GGSPSVTWARASSSLSSSSSSSSAASSLDADEDGPMP-- 1290
Query: 150 HINMEQAPIQS-EPRVRLVMAQHMIRDIQTLLSRMECRGGPQPQH-----------SQPP 197
+ + PI++ E R R+ + + ++ LS++ P H ++PP
Sbjct: 1291 --SRNRPPIKTYEARSRIGLKLKIKQEAG--LSKVVHNTALDPVHQPPPPPATLKVAEPP 1346
Query: 198 PQPPAVTPEPVALSSQTSEPVESEAPPREPMEAEEVEERAPAQN-----------PELTP 246
P+PP P P + T + AP R+P+ R P + PE TP
Sbjct: 1347 PRPP-PPPPPTGQMNGTVDHPPPAAPERKPLGTAPHCPRLPLRKTYRENVGGPGAPEGTP 1405
Query: 247 GPAPAGPTPAP 257
G +PAP
Sbjct: 1406 AGRARGGSPAP 1416
>gi|224451135 splicing factor, arginine/serine-rich 15 isoform 3
[Homo sapiens]
Length = 1125
Score = 70.5 bits (171), Expect = 9e-12
Identities = 94/342 (27%), Positives = 123/342 (35%), Gaps = 71/342 (20%)
Query: 354 PMSHYTTPMVLQQAAIPIQINVGTTVTMTGNGTRPPPTPNAEAPP--PGPGQASSVAPSS 411
P+S P+ + IP+ + T PPP + PP PGP ++ P +
Sbjct: 654 PVSPIPKPLPVPVPPIPVPAPI----------TVPPP----QVPPHQPGPPVVGALQPPA 699
Query: 412 TNVESSAEGAPPPG--PAPPPATSHPRVIRISHQSVE-----------PVVMMHMNIQDS 458
+ G PPPG P PP P +R + P + ++I
Sbjct: 700 F---TPPLGIPPPGFGPGVPPPPPPPPFLRPGFNPMHLPPGFLPPGPPPPITPPVSIPPP 756
Query: 459 GTQPGGVPSAPTGPLGPPGHGQTL---GQQVPGFPTAPTRVVIARPTPPQARPSHPGGPP 515
T P +P+ +G G G ++ G VP P APT + PTPP +P
Sbjct: 757 HTPPISIPNLVSGARGNAESGDSVKMYGSAVP--PAAPTNL----PTPPVTQPVS----- 805
Query: 516 VSGTLQGAGLGTNASLAQMVSGLVGQLLMQPVLVA-QGTPGMAPPPA---PATASASAGT 571
+ GT QG G L +GL+G +P L+ Q PGM PP P
Sbjct: 806 LLGT-QGVAPGPVIGLQAPSTGLLGA---RPGLIPLQRPPGMPPPHLQRFPLMPPRPMPP 861
Query: 572 TNTATTAGPAPGGPAQPPPTPQPSMADLQFSQLLGNLLGPAG-PGAGGSGVASPTITVAM 630
P PGG A PPP G + P G PG GG G
Sbjct: 862 HMMHRGPPPGPGGFAMPPPHGMKGPFPPH-----GPFVRPGGMPGLGGPGPG-------- 908
Query: 631 PGVPAFLQGMTDFLQATQTAPPPPPPPPPPPPAPEQQTMPPP 672
PG P G Q Q P P P P +QQ PPP
Sbjct: 909 PGGPEDRDGRQ---QPPQQPQQQPQPQAPQQPQQQQQQQPPP 947
Score = 55.5 bits (132), Expect = 3e-07
Identities = 79/298 (26%), Positives = 99/298 (33%), Gaps = 67/298 (22%)
Query: 461 QPGGVPSAPTGPLGPPGHGQTLGQQVPGFPTAPTRVVIARPTPPQARPSHPGGPPVSGTL 520
Q GG ++ T P+ P + + +P P P V PP P H GPPV G L
Sbjct: 643 QNGGAETSHTEPVSP------IPKPLP-VPVPPIPVPAPITVPPPQVPPHQPGPPVVGAL 695
Query: 521 QGAGLGTNASLAQMVSGLVGQLLMQPVLVAQGTPGMAPPPAPATASASAGTTNTATTAGP 580
Q + G PG+ PPP P G G
Sbjct: 696 QPPAFTPPLGIPPPGFG----------------PGV-PPPPPPPPFLRPGFNPMHLPPGF 738
Query: 581 APGGP---------AQPPPTPQPSMADLQFSQLLGN--------LLGPAGPGAGGSGVAS 623
P GP PP TP S+ +L S GN + G A P A + + +
Sbjct: 739 LPPGPPPPITPPVSIPPPHTPPISIPNL-VSGARGNAESGDSVKMYGSAVPPAAPTNLPT 797
Query: 624 PTIT--VAMPGVPAFLQGMTDFLQATQTA-------------PPPPPPP--------PPP 660
P +T V++ G G LQA T PP PPP PP
Sbjct: 798 PPVTQPVSLLGTQGVAPGPVIGLQAPSTGLLGARPGLIPLQRPPGMPPPHLQRFPLMPPR 857
Query: 661 PPAPEQQTMPPPGSPSGGAGSPGGLGLESLSPEFFTSVVQGVLSSLLGSLGARAGSSE 718
P P PP P GG P G++ P V G + LG G G E
Sbjct: 858 PMPPHMMHRGPPPGP-GGFAMPPPHGMKGPFPPHGPFVRPGGMPG-LGGPGPGPGGPE 913
Score = 47.4 bits (111), Expect = 8e-05
Identities = 45/157 (28%), Positives = 56/157 (35%), Gaps = 32/157 (20%)
Query: 377 TTVTMTGNGTRPPPTPNAEAPPPGPGQASSVAPSSTNVESSAEGAPPPGPAPPPATSHPR 436
T VT T PP P A P ++ AP++ A PP P P +
Sbjct: 283 TAVTTTAPAAAVPPAPTATVP-------AAAAPAA------ASPPPPQAPFGFPGDGMQQ 329
Query: 437 VIRISHQSVEPVVMMHMNIQDSGTQPGGVPSAPTGPLGPPGHGQTLGQQVPGFPTAPTRV 496
HQ+++ M IQ P PL P G Q+PGF PT
Sbjct: 330 PAYTQHQNMDQFQPRMMGIQQD-------PMHHQVPLPPNG-------QMPGFGLLPTP- 374
Query: 497 VIARPTPPQARPSHPGGPPVSGTLQGAGLGTNASLAQ 533
P PP A+P P PPV Q + N L Q
Sbjct: 375 ----PFPPMAQPVIPPTPPVQQPFQASFQAQNEPLTQ 407
Score = 43.5 bits (101), Expect = 0.001
Identities = 39/139 (28%), Positives = 51/139 (36%), Gaps = 35/139 (25%)
Query: 559 PPAPATASASAGTTNTATT--AGPAPGG-PAQPPPTPQPSMADLQFSQLLGNLLGPAGPG 615
P P A G T+ T P P P PP P P+ + Q+ + GP G
Sbjct: 634 PKKPENEVAQNGGAETSHTEPVSPIPKPLPVPVPPIPVPAPITVPPPQVPPHQPGPPVVG 693
Query: 616 AGGSGVASPTITVAMPGVPAFLQGMTDFLQATQTAPPPPPPPP----------------- 658
A +P + + PG F G+ PPPPPPPP
Sbjct: 694 ALQPPAFTPPLGIPPPG---FGPGV----------PPPPPPPPFLRPGFNPMHLPPGFLP 740
Query: 659 --PPPPAPEQQTMPPPGSP 675
PPPP ++PPP +P
Sbjct: 741 PGPPPPITPPVSIPPPHTP 759
Score = 33.5 bits (75), Expect = 1.2
Identities = 52/198 (26%), Positives = 63/198 (31%), Gaps = 31/198 (15%)
Query: 488 GFPTAPTRVVIARPTPPQARPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLVGQLLMQPV 547
G P P +V PT QA P+ P Q A++AQ+ GQ L Q +
Sbjct: 153 GSPPPPVKVSSEPPT--QATPNSVPAVP-----QLPSSDAFAAVAQLFQTTQGQQLQQIL 205
Query: 548 LVAQGTPGMAPPPAPAT-----ASASAGTTNTATTAGPAPGGPAQPPPTPQPSMADLQFS 602
Q P P +PA A A T TT A PP Q + D
Sbjct: 206 QTFQQPP---KPQSPALDNAVMAQVQAITAQLKTTPTQPSEQKAAFPPPEQKTAFD---K 259
Query: 603 QLLGNLLGPAGPGAGGSGVASPTITVAMPGVPAFLQGMTDFLQATQTAPPPPPPPPPPPP 662
+LL P A T V A PP P P
Sbjct: 260 KLLDRFDYDDEPEAVEESKKEDTTAVTTTAPAA-------------AVPPAPTATVPAAA 306
Query: 663 APEQQTMPPPGSPSGGAG 680
AP + PPP +P G G
Sbjct: 307 APAAASPPPPQAPFGFPG 324
Score = 32.0 bits (71), Expect = 3.4
Identities = 82/345 (23%), Positives = 112/345 (32%), Gaps = 60/345 (17%)
Query: 187 GGPQPQHSQPP---PQPPAVTPEPVALSSQTSEPVESEAPPREPMEAEEVEERAPAQNPE 243
GG + H++P P+P V P+ + + + P + PP +P + PA P
Sbjct: 645 GGAETSHTEPVSPIPKPLPVPVPPIPVPAPITVP-PPQVPPHQPGPPVVGALQPPAFTPP 703
Query: 244 L---TPGPAPAGPTPAPETN-----------APNHPSPAEYVEVLQELQRLESRLQPFLQ 289
L PG P P P P P P + + P
Sbjct: 704 LGIPPPGFGPGVPPPPPPPPFLRPGFNPMHLPPGFLPPGPPPPITPPVSIPPPHTPPI-- 761
Query: 290 RYYEVLGAAATTDYNNNHEGREEDQRLINLVGESLRLLGNTFVALSDLRCNLACTPPRHL 349
+ + + G E G+S+++ G+ + NL TPP
Sbjct: 762 ---------SIPNLVSGARGNAES-------GDSVKMYGSAVPPAAP--TNLP-TPP--- 799
Query: 350 HVVRPMSHYTTPMVLQQAAIPIQINVGTTVTMTG-NGTRPPPTPNAEAP--PPGPGQASS 406
V +P+S T V A P+ +G TG G RP P P PP Q
Sbjct: 800 -VTQPVSLLGTQGV---APGPV---IGLQAPSTGLLGARPGLIPLQRPPGMPPPHLQRFP 852
Query: 407 VAPSSTNVESSAEGAPPPGP---APPPATSHPRVIRISHQSVEPVVMMHMNIQDSGTQPG 463
+ P PPPGP A PP V P M + G PG
Sbjct: 853 LMPPRPMPPHMMHRGPPPGPGGFAMPPPHGMKGPFPPHGPFVRPGGM--PGLGGPGPGPG 910
Query: 464 GVPSAPTGPLGPPGHGQTLGQQVPGFPTAPTRVVIARPTPPQARP 508
G P G PP Q Q P P P + +P P Q P
Sbjct: 911 G-PEDRDGRQQPPQQPQQ--QPQPQAPQQPQQQQQQQPPPSQQPP 952
Score = 30.4 bits (67), Expect = 9.9
Identities = 37/145 (25%), Positives = 56/145 (38%), Gaps = 33/145 (22%)
Query: 98 ASSGTGSASATHGGGSPPGTRGPGASVHDRNANSYVMVGTFNLPSDGS---AVDVHINME 154
A + T A+A SPP + P F P DG A H NM+
Sbjct: 297 APTATVPAAAAPAAASPPPPQAP-----------------FGFPGDGMQQPAYTQHQNMD 339
Query: 155 QAPIQSEPRVRLVMAQHMIRDIQTLLSRMECRGG-----PQPQHSQP--PPQPPAVTPEP 207
Q +PR+ + M + + G P P +QP PP PP P
Sbjct: 340 QF----QPRMMGIQQDPMHHQVPLPPNGQMPGFGLLPTPPFPPMAQPVIPPTPPVQQPFQ 395
Query: 208 VALSSQTSEPVESEAPPREPMEAEE 232
+ +Q +EP+ ++ P ++ ME E+
Sbjct: 396 ASFQAQ-NEPL-TQKPHQQEMEVEQ 418
>gi|48762934 alpha 2 type I collagen [Homo sapiens]
Length = 1366
Score = 69.7 bits (169), Expect = 1e-11
Identities = 97/349 (27%), Positives = 117/349 (33%), Gaps = 84/349 (24%)
Query: 384 NGTRPPPTPNA-------EAPPPGPGQASSVAPSSTNVESSAEGAPP-------PGPAPP 429
NG + PP P + PP PG PS E G PGPA P
Sbjct: 528 NGAQGPPGPQGVQGGKGEQGPPGPPGFQGLPGPSGPAGEVGKPGERGLHGEFGLPGPAGP 587
Query: 430 PATSHPRVIRISHQSVEPVVMMHMNIQDSGTQPGGVPSAPTGPLGPPGHGQTLGQQVPGF 489
P +SG P GP GPPG G+ PG
Sbjct: 588 RGERGPP-------------------GESGAAGPTGPIGSRGPSGPPGPDGNKGE--PGV 626
Query: 490 PTAPTRVVIARPTPPQARPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLVGQLLMQPVLV 549
A V A P+ P P G + G G G GL G++
Sbjct: 627 VGA---VGTAGPSGPSGLPGERGAAGIPG-----GKGEKGE-----PGLRGEIGNPGRDG 673
Query: 550 AQGTPGMAPPPAPATASASAGTTNTATTAGPA-----PG-----GPAQPPPTPQPSMA-- 597
A+G PG P PA A+ G A AGPA PG GPA P P+ A
Sbjct: 674 ARGAPGAVGAPGPAGATGDRGEAGAAGPAGPAGPRGSPGERGEVGPAGPNGFAGPAGAAG 733
Query: 598 --------DLQFSQLLGNLLGPAGP-----GAGGSGVASPTITVAMPGVPAFLQGMTDFL 644
+ + ++GP GP AG +G P + G P GMT F
Sbjct: 734 QPGAKGERGAKGPKGENGVVGPTGPVGAAGPAGPNGPPGPAGSRGDGGPP----GMTGFP 789
Query: 645 QATQTAPPPPP-----PPPPPPPAPEQQTMPPPG--SPSGGAGSPGGLG 686
A PP P PP PP PA ++ P G P G G G +G
Sbjct: 790 GAAGRTGPPGPSGISGPPGPPGPAGKEGLRGPRGDQGPVGRTGEVGAVG 838
Score = 55.5 bits (132), Expect = 3e-07
Identities = 86/344 (25%), Positives = 109/344 (31%), Gaps = 88/344 (25%)
Query: 389 PPTPNAEAPPPGPGQASSVAPSSTNVESSAEGAPPPGPAPPPATSHPRVIRISHQSVEPV 448
P P + P PG+ + T ++ A G P G P R S SV PV
Sbjct: 192 PGAPGVKGEPGAPGE------NGTPGQTGARGLP--GERGRVGAPGPAGARGSDGSVGPV 243
Query: 449 VMMHMNIQDSGTQPGGVPSAPTGPLGPPGHGQTLGQQVPGFPTAPT-RVVIARPTPPQAR 507
I +G P G P AP GP G +G P P P V + + P
Sbjct: 244 GPAGP-IGSAG--PPGFPGAP----GPKGEIGAVGNAGPAGPAGPRGEVGLPGLSGPVGP 296
Query: 508 PSHPGGPPVSGTLQGAGLGTNASLAQMVSGLVGQLLMQPVLVAQGTPGMAPPPAPATASA 567
P +PG ++G AGL G+ G A G PG P P A+
Sbjct: 297 PGNPGANGLTGAKGAAGL----------PGVAG---------APGLPGPRGIPGPVGAAG 337
Query: 568 SAGTTNTATTAGPA----------------PGGPAQP-----------------PPTP-- 592
+ G GPA P GP P PP P
Sbjct: 338 ATGARGLVGEPGPAGSKGESGNKGEPGSAGPQGPPGPSGEEGKRGPNGEAGSAGPPGPPG 397
Query: 593 ---QPSMADLQFSQLLGNLLGPAGP--GAGGSGVASPTITVAMPGVPAFLQGMTDFLQAT 647
P L + ++GP G +G +GV P PG P L
Sbjct: 398 LRGSPGSRGLPGADGRAGVMGPPGSRGASGPAGVRGPNGDAGRPGEPG--------LMGP 449
Query: 648 QTAPPPPPPPPP-----PPPAPEQQTMPPPGSPSGGAGSPGGLG 686
+ P P P P P P P P+G G PG +G
Sbjct: 450 RGLPGSPGNIGPAGKEGPVGLPGIDGRPGPIGPAGARGEPGNIG 493
Score = 53.9 bits (128), Expect = 8e-07
Identities = 87/327 (26%), Positives = 107/327 (32%), Gaps = 40/327 (12%)
Query: 385 GTRPPPTPNAEAPPPGP----GQASSVAPSSTNVESSAEGAP----PPGPAPPPATSHPR 436
G R PP + A P GP G + P E GA P GP+ P
Sbjct: 589 GERGPPGESGAAGPTGPIGSRGPSGPPGPDGNKGEPGVVGAVGTAGPSGPSGLPGERGAA 648
Query: 437 VIRISH-QSVEPVVMMHMNI--QDSGTQPGGVPSAPTGPLGPPGHGQTLGQQVPGFPTAP 493
I + EP + + +D G AP GP G G G P P P
Sbjct: 649 GIPGGKGEKGEPGLRGEIGNPGRDGARGAPGAVGAP-GPAGATGDRGEAGAAGPAGPAGP 707
Query: 494 TRVVIARPTPPQARPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLVGQLLMQPVLVAQGT 553
R A P+ GP + GA A + +G+VG PV A G
Sbjct: 708 RGSPGERGEVGPAGPNGFAGPAGAAGQPGAKGERGAKGPKGENGVVGPT--GPVGAA-GP 764
Query: 554 PGMAPPPAPATASASAGTTN-------TATTAGPAPGGPAQPPPTPQPSMADLQFSQLLG 606
G PP PA + G T P P G + PP P P+ +
Sbjct: 765 AGPNGPPGPAGSRGDGGPPGMTGFPGAAGRTGPPGPSGISGPPGPPGPAGKE-------- 816
Query: 607 NLLGPAGPGAGGSGVASPTITVAMPGVPAFLQGMTDFLQATQTAPPPPPPPPPPPPAPEQ 666
G GP G G T V G P F +A PP P P AP
Sbjct: 817 ---GLRGP-RGDQGPVGRTGEVGAVGPPGFAGEKGPSGEAGTAGPPGTPGPQGLLGAPGI 872
Query: 667 QTMP----PPGSP--SGGAGSPGGLGL 687
+P G P +G G PG LG+
Sbjct: 873 LGLPGSRGERGLPGVAGAVGEPGPLGI 899
Score = 53.9 bits (128), Expect = 8e-07
Identities = 100/353 (28%), Positives = 119/353 (33%), Gaps = 75/353 (21%)
Query: 375 VGTTVTMTGNGTRPPPTPNAEAPPPG----PGQASSVAPSSTNVESSAEGAPPPGPAPPP 430
VG NG P + PPG PG A P + S G PPGPA
Sbjct: 759 VGAAGPAGPNGPPGPAGSRGDGGPPGMTGFPGAAGRTGPPGPSGISGPPG--PPGPAGKE 816
Query: 431 ATSHPR-----VIRISHQ-SVEPVVMMHMN--IQDSGTQ-PGGVPSAPTGPLGPPG---- 477
PR V R +V P ++GT P G P P G LG PG
Sbjct: 817 GLRGPRGDQGPVGRTGEVGAVGPPGFAGEKGPSGEAGTAGPPGTPG-PQGLLGAPGILGL 875
Query: 478 HGQTLGQQVPGFPTA---PTRVVIARPTPPQARPSHPGGPPVSGTLQGAGLGTNASLA-- 532
G + +PG A P + IA P + P G P V+G AG N
Sbjct: 876 PGSRGERGLPGVAGAVGEPGPLGIAGPPGARGPPGAVGSPGVNGAPGEAGRDGNPGNDGP 935
Query: 533 ---------QMVSGLVGQLLMQPVLVAQGTPGMAPPPAPATASASAGTTNTATTAGPAPG 583
+ G G + PV A G PG P PA + G T + GPA
Sbjct: 936 PGRDGQPGHKGERGYPGNI--GPVGAA-GAPGPHGPVGPAGKHGNRGETGPSGPVGPAGA 992
Query: 584 GPAQPPPTPQ-----------------------------PSMADLQFSQLLGNLLGPAGP 614
+ P PQ P +A Q +GPAGP
Sbjct: 993 VGPRGPSGPQGIRGDKGEPGEKGPRGLPGLKGHNGLQGLPGIAGHHGDQGAPGSVGPAGP 1052
Query: 615 --GAGGSGVASPTITVAMPGV--PAFLQGMTDFLQATQ-TAPPPPPPPPPPPP 662
AG SG A PG PA ++G Q Q A PP PP PP PP
Sbjct: 1053 RGPAGPSGPAGKDGRTGHPGTVGPAGIRGP----QGHQGPAGPPGPPGPPGPP 1101
Score = 52.0 bits (123), Expect = 3e-06
Identities = 89/321 (27%), Positives = 106/321 (33%), Gaps = 59/321 (18%)
Query: 474 GPPGHGQTLGQQVPGFPTAPTRVVIARPTPPQARPSHPGGPPVSGTLQGAGLGTNASLAQ 533
GP G G++ P P P R PT P P PG P + G G L
Sbjct: 33 GPAGDRGPRGERGP--PGPPGRDGEDGPTGPPGPPGPPGPPGLGGNFAAQYDGKGVGLGP 90
Query: 534 MVSGLVGQLLMQPVLVAQGTPGMAPPPAPATASASAGTTNTATTAGPA-----------P 582
GL+G + A G PG PA G T A GPA P
Sbjct: 91 GPMGLMGP---RGPPGAAGAPGPQGFQGPAGEPGEPGQTGPAGARGPAGPPGKAGEDGHP 147
Query: 583 GGPAQP--------------PPTP-QPSMADLQFSQLLGNLLGPAG-------PGA-GGS 619
G P +P P TP P ++ L L G G PGA G +
Sbjct: 148 GKPGRPGERGVVGPQGARGFPGTPGLPGFKGIRGHNGLDGLKGQPGAPGVKGEPGAPGEN 207
Query: 620 GVASPTITVAMPGV--------PAFLQGMTDFLQATQTAPP-----PPPPPPPPPPAPEQ 666
G T +PG PA +G + A P PP P P P E
Sbjct: 208 GTPGQTGARGLPGERGRVGAPGPAGARGSDGSVGPVGPAGPIGSAGPPGFPGAPGPKGEI 267
Query: 667 QTMPPPGSPSGGAGSPGGLGLESLSPEFFTSVVQGVLSSLLGSLGARAGSSESIAAFIQR 726
+ G P+G AG G +GL LS G G GA+ + A
Sbjct: 268 GAVGNAG-PAGPAGPRGEVGLPGLSGPVGPPGNPGA----NGLTGAKGAAGLPGVAGAPG 322
Query: 727 LSGSSNIFEPGADGALGFFGA 747
L G I PG GA G GA
Sbjct: 323 LPGPRGI--PGPVGAAGATGA 341
>gi|192807323 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform A [Homo sapiens]
Length = 1679
Score = 68.9 bits (167), Expect = 3e-11
Identities = 88/326 (26%), Positives = 119/326 (36%), Gaps = 45/326 (13%)
Query: 385 GTRPPPTPNAEAPPPGPGQASSVAPSSTNVESSAEGAPPPGPAPPPATSHPRVIR----- 439
G P P P+ P PGP + + PS SA P P PP A HP +
Sbjct: 9 GGTPRPGPS---PGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSA-GHPIPTQGPGGY 64
Query: 440 ---ISHQSVEPVVMMH----------MNIQDSGTQPGGVPSAPTGPLGPPGHGQTLGQQV 486
HQ +P+ MH ++ G + GG P H Q +
Sbjct: 65 PQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGYPSPL 124
Query: 487 PGFPTAPTRVVIARPTPPQARPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLVGQL---L 543
G A + V + P+ S PGG P+ G A N + QL +
Sbjct: 125 GGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQLRAQI 184
Query: 544 MQPVLVAQGTP----------GMAPPPAPATASASAGTTN-TATTAGPAPGGPAQPPPTP 592
M ++A+G P G P P + + +AT GP PG P P P
Sbjct: 185 MAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPG----PGPGP 240
Query: 593 QPSMADLQFSQLLGNLLGPAGPGAGGSGVASPTITVAMPGVP--AFLQG-MTDFLQATQT 649
P A +S+ G + GP P G SGV P + PG P + +G M + T T
Sbjct: 241 GPGPAPPNYSRPHG-MGGPNMPPPGPSGV-PPGMPGQPPGGPPKPWPEGPMANAAAPTST 298
Query: 650 APPPPPPPPPPPPAPEQQTMPPPGSP 675
PP P P+P +PP SP
Sbjct: 299 PQKLIPPQPTGRPSPAPPAVPPAASP 324
Score = 44.7 bits (104), Expect = 5e-04
Identities = 56/209 (26%), Positives = 63/209 (30%), Gaps = 90/209 (43%)
Query: 386 TRPPPTPNAEAPPPGPGQASSVAPSSTNVESSAEGAPPPGPAP-PPATSHPRVIRISHQS 444
T PPP+ +A P PGPG P PGP P PP S P +
Sbjct: 219 TLPPPSVSATGPGPGPGPG-----------------PGPGPGPAPPNYSRPHGM------ 255
Query: 445 VEPVVMMHMNIQDSGTQPGGVPSAPTGPLGPPGHGQTLGQQVPGFPTAPTRVVIARPTPP 504
GG P GP G P PG P P
Sbjct: 256 ------------------GGPNMPPPGPSGVP----------PGMPGQP----------- 276
Query: 505 QARPSHPGGPPV---SGTLQGAGLGTNASLAQMVSGLVGQLLMQPVLVAQGTPGMAPPPA 561
PGGPP G + A T+ Q L+ P G P APP
Sbjct: 277 ------PGGPPKPWPEGPMANAAAPTSTP----------QKLIPPQ--PTGRPSPAPPAV 318
Query: 562 PATASASAGTTNTATTAGPAPGGPAQPPP 590
P AS +PG PAQP P
Sbjct: 319 PPAASP------VMPPQTQSPGQPAQPAP 341
Score = 40.4 bits (93), Expect = 0.010
Identities = 84/350 (24%), Positives = 116/350 (33%), Gaps = 58/350 (16%)
Query: 188 GPQP--QHSQPPPQP-PAVTPEPVALSSQTSEPVESEAPPREPMEAEEVEERAPAQNPEL 244
GP P HS P P P P+ P ++ +PME+ + E+ + +P
Sbjct: 33 GPSPGSAHSMMGPSPGPPSAGHPIPTQGPGGYPQDNMHQMHKPMES--MHEKGMSDDPRY 90
Query: 245 TP---------GPAPAGPTPAP-ETNAPNHPSPAEYVEVLQELQRLESRLQPFLQRYYEV 294
G A GP P+P + ++ +PSP L E P
Sbjct: 91 NQMKGMGMRSGGHAGMGPPPSPMDQHSQGYPSP---------LGGSEHASSPV-----PA 136
Query: 295 LGAAATTDYNNNHEGREEDQRLINLVGESLRLLGNTFV---ALSDLRCNLACTP------ 345
G ++ ++ G D +G+ R G T L LR +
Sbjct: 137 SGPSSGPQMSSGPGGAPLDGADPQALGQQNR--GPTPFNQNQLHQLRAQIMAYKMLARGQ 194
Query: 346 --PRHLHVV----RPMSHYTTPMVLQQAAIPIQINVGTTVTMTGNGTRPPPTPNAEAP-- 397
P HL + RPM P + QQ +V T G G P P P P
Sbjct: 195 PLPDHLQMAVQGKRPM-----PGMQQQMPTLPPPSVSATGPGPGPGPGPGPGPGPAPPNY 249
Query: 398 --PPGPGQASSVAPSSTNVESSAEGAPPPGPAPPPATSHPRVIRISHQSVEPVVMMHMNI 455
P G G + P + V G PP GP P P P + S ++
Sbjct: 250 SRPHGMGGPNMPPPGPSGVPPGMPGQPPGGP-PKPWPEGPMANAAAPTSTPQKLIPPQPT 308
Query: 456 QDSGTQPGGVPSAPTGPLGPPGHGQTLGQQVPGFPTAPTRVVIARPTPPQ 505
P VP A P+ PP Q+ GQ P P +R TP Q
Sbjct: 309 GRPSPAPPAVPPA-ASPVMPP-QTQSPGQPAQPAPMVPLHQKQSRITPIQ 356
Score = 36.6 bits (83), Expect = 0.14
Identities = 39/128 (30%), Positives = 55/128 (42%), Gaps = 16/128 (12%)
Query: 187 GGPQPQHSQPPPQPPAVTPE-PVA-LSSQTSEPVE----------SEAPPREPMEAEEVE 234
G P QPP PP PE P+A ++ TS P + S APP P A V
Sbjct: 267 GVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPAASPVM 326
Query: 235 ERAPAQNPELTPGPAPAGPTPAPETNAP--NHPSPAEYVEVLQELQ-RLESRLQPFLQRY 291
Q+P PAP P ++ P + VE+LQE + RL++R+ +Q
Sbjct: 327 P-PQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRGLDPVEILQEREYRLQARIAHRIQEL 385
Query: 292 YEVLGAAA 299
+ G+ A
Sbjct: 386 ENLPGSLA 393
Score = 35.8 bits (81), Expect = 0.23
Identities = 67/282 (23%), Positives = 85/282 (30%), Gaps = 69/282 (24%)
Query: 420 GAPPPGPAPPPATSHPRVIRISHQSVEPVVMMHMNIQDSGTQPGGVPSAPTGPLGPPGHG 479
G P PGP+P P S ++ S G PG S GPP G
Sbjct: 10 GTPRPGPSPGPGPSPGAMLGPS----------------PGPSPGSAHSMMGPSPGPPSAG 53
Query: 480 QTLGQQVPGFPTAPTRVVIARPTPPQARPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLV 539
+ Q PG + +P P + Q G+G M SG
Sbjct: 54 HPIPTQGPGGYPQDNMHQMHKPMESMHEKGMSDDPRYN---QMKGMG-------MRSG-- 101
Query: 540 GQLLMQPVLVAQGTPGMAPPPAPATASASAGTTNTATTAGPAPGGPAQ----PPPTPQPS 595
G GM PPP+P + P+P G ++ P P PS
Sbjct: 102 ------------GHAGMGPPPSPMDQHSQGY---------PSPLGGSEHASSPVPASGPS 140
Query: 596 MADLQFSQLLGNLLGPAGPGAGGSGVASPT-----------ITVAMPGVPAFLQGMTDFL 644
S G L A P A G PT + + A Q + D L
Sbjct: 141 SGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQLRAQIMAYKMLARGQPLPDHL 200
Query: 645 QATQTAPPPPPPPPPPPPAPEQQTMPPPGSPSGGAGSPGGLG 686
Q P P P T+PPP + G G G G
Sbjct: 201 QMAVQGKRPMPGMQQQMP-----TLPPPSVSATGPGPGPGPG 237
Score = 33.5 bits (75), Expect = 1.2
Identities = 52/222 (23%), Positives = 72/222 (32%), Gaps = 74/222 (33%)
Query: 498 IARPTPPQARPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLVGQLLMQPVLVAQGTPGMA 557
++ P PP PG P G GA LG
Sbjct: 1 MSTPDPPLGGTPRPGPSPGPGPSPGAMLG------------------------------- 29
Query: 558 PPPAPATASASAGTTNTATTAGPAPGGPA--QPPPT------PQPSM------------- 596
P P P+ SA + GP+PG P+ P PT PQ +M
Sbjct: 30 PSPGPSPGSAH-------SMMGPSPGPPSAGHPIPTQGPGGYPQDNMHQMHKPMESMHEK 82
Query: 597 ---ADLQFSQLLGNLLGPAGPGAGGSGVASPTITVAMPGVPAFLQGMTDFLQATQTAPPP 653
D +++Q+ G +G G G G + G P+ L G +
Sbjct: 83 GMSDDPRYNQMKG--MGMRSGGHAGMGPPPSPMDQHSQGYPSPLGG---------SEHAS 131
Query: 654 PPPPPPPPPAPEQQTMPPPGSPSGGAGSPGGLGLESLSPEFF 695
P P P + Q + P G+P GA P LG ++ P F
Sbjct: 132 SPVPASGPSSGPQMSSGPGGAPLDGA-DPQALGQQNRGPTPF 172
Score = 32.0 bits (71), Expect = 3.4
Identities = 47/176 (26%), Positives = 65/176 (36%), Gaps = 15/176 (8%)
Query: 942 QPLPEE-PMEVQGAERASPEPQREN--------ASPAPGTTAEEAMSRGPPPAPEGGSRD 992
QPLP+ M VQG +R P Q++ ++ PG GP PAP SR
Sbjct: 194 QPLPDHLQMAVQG-KRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGPGPGPAPPNYSRP 252
Query: 993 EQDGASAETEPWAAAVPPEWVPIIQQDIQSQRKVKPQPPLSDAYLSGMPAKRRKTMQGEG 1052
G P + VPP + Q K P+ P+++A ++ Q G
Sbjct: 253 HGMGGPNMPPPGPSGVPP---GMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTG 309
Query: 1053 PQLLLSEAVSRAAKAAGARPLTSPESLSRDLEAPEVQESYRQQLRSDIQKRLQEDP 1108
AV AA SP ++ AP V +Q + IQK DP
Sbjct: 310 RPSPAPPAVPPAASPVMPPQTQSPGQPAQ--PAPMVPLHQKQSRITPIQKPRGLDP 363
Score = 31.6 bits (70), Expect = 4.4
Identities = 26/99 (26%), Positives = 35/99 (35%), Gaps = 15/99 (15%)
Query: 171 HMIRDIQTLLSRMECRGGPQPQHSQPPPQPPAVTPEPVALSSQTSEPVESEAPPREPMEA 230
H +R Q + +M RG P P H Q +A+ + P + P P +
Sbjct: 178 HQLR-AQIMAYKMLARGQPLPDHLQ------------MAVQGKRPMPGMQQQMPTLPPPS 224
Query: 231 EEVEERAPAQNPELTPGPAPAGPTPAPE--TNAPNHPSP 267
P P PGP PA P + PN P P
Sbjct: 225 VSATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPP 263
Score = 31.2 bits (69), Expect = 5.8
Identities = 27/99 (27%), Positives = 38/99 (38%), Gaps = 21/99 (21%)
Query: 938 GDPPQPLPEEPMEVQGAERASPE---PQRENASPAPGTTAEEAMSRGPPPAPEGGSRDEQ 994
G PP+P PE PM A ++P+ P + P+P PP P S
Sbjct: 278 GGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSP----------APPAVPPAASPVMP 327
Query: 995 DGASAETEPWAAAVPPEWVPIIQQD-----IQSQRKVKP 1028
+ +P A P VP+ Q+ IQ R + P
Sbjct: 328 PQTQSPGQP---AQPAPMVPLHQKQSRITPIQKPRGLDP 363
>gi|192807320 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform F [Homo sapiens]
Length = 1613
Score = 68.9 bits (167), Expect = 3e-11
Identities = 88/326 (26%), Positives = 119/326 (36%), Gaps = 45/326 (13%)
Query: 385 GTRPPPTPNAEAPPPGPGQASSVAPSSTNVESSAEGAPPPGPAPPPATSHPRVIR----- 439
G P P P+ P PGP + + PS SA P P PP A HP +
Sbjct: 9 GGTPRPGPS---PGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSA-GHPIPTQGPGGY 64
Query: 440 ---ISHQSVEPVVMMH----------MNIQDSGTQPGGVPSAPTGPLGPPGHGQTLGQQV 486
HQ +P+ MH ++ G + GG P H Q +
Sbjct: 65 PQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGYPSPL 124
Query: 487 PGFPTAPTRVVIARPTPPQARPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLVGQL---L 543
G A + V + P+ S PGG P+ G A N + QL +
Sbjct: 125 GGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQLRAQI 184
Query: 544 MQPVLVAQGTP----------GMAPPPAPATASASAGTTN-TATTAGPAPGGPAQPPPTP 592
M ++A+G P G P P + + +AT GP PG P P P
Sbjct: 185 MAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPG----PGPGP 240
Query: 593 QPSMADLQFSQLLGNLLGPAGPGAGGSGVASPTITVAMPGVP--AFLQG-MTDFLQATQT 649
P A +S+ G + GP P G SGV P + PG P + +G M + T T
Sbjct: 241 GPGPAPPNYSRPHG-MGGPNMPPPGPSGV-PPGMPGQPPGGPPKPWPEGPMANAAAPTST 298
Query: 650 APPPPPPPPPPPPAPEQQTMPPPGSP 675
PP P P+P +PP SP
Sbjct: 299 PQKLIPPQPTGRPSPAPPAVPPAASP 324
Score = 44.7 bits (104), Expect = 5e-04
Identities = 56/209 (26%), Positives = 63/209 (30%), Gaps = 90/209 (43%)
Query: 386 TRPPPTPNAEAPPPGPGQASSVAPSSTNVESSAEGAPPPGPAP-PPATSHPRVIRISHQS 444
T PPP+ +A P PGPG P PGP P PP S P +
Sbjct: 219 TLPPPSVSATGPGPGPGPG-----------------PGPGPGPAPPNYSRPHGM------ 255
Query: 445 VEPVVMMHMNIQDSGTQPGGVPSAPTGPLGPPGHGQTLGQQVPGFPTAPTRVVIARPTPP 504
GG P GP G P PG P P
Sbjct: 256 ------------------GGPNMPPPGPSGVP----------PGMPGQP----------- 276
Query: 505 QARPSHPGGPPV---SGTLQGAGLGTNASLAQMVSGLVGQLLMQPVLVAQGTPGMAPPPA 561
PGGPP G + A T+ Q L+ P G P APP
Sbjct: 277 ------PGGPPKPWPEGPMANAAAPTSTP----------QKLIPPQ--PTGRPSPAPPAV 318
Query: 562 PATASASAGTTNTATTAGPAPGGPAQPPP 590
P AS +PG PAQP P
Sbjct: 319 PPAASP------VMPPQTQSPGQPAQPAP 341
Score = 40.4 bits (93), Expect = 0.010
Identities = 84/350 (24%), Positives = 116/350 (33%), Gaps = 58/350 (16%)
Query: 188 GPQP--QHSQPPPQP-PAVTPEPVALSSQTSEPVESEAPPREPMEAEEVEERAPAQNPEL 244
GP P HS P P P P+ P ++ +PME+ + E+ + +P
Sbjct: 33 GPSPGSAHSMMGPSPGPPSAGHPIPTQGPGGYPQDNMHQMHKPMES--MHEKGMSDDPRY 90
Query: 245 TP---------GPAPAGPTPAP-ETNAPNHPSPAEYVEVLQELQRLESRLQPFLQRYYEV 294
G A GP P+P + ++ +PSP L E P
Sbjct: 91 NQMKGMGMRSGGHAGMGPPPSPMDQHSQGYPSP---------LGGSEHASSPV-----PA 136
Query: 295 LGAAATTDYNNNHEGREEDQRLINLVGESLRLLGNTFV---ALSDLRCNLACTP------ 345
G ++ ++ G D +G+ R G T L LR +
Sbjct: 137 SGPSSGPQMSSGPGGAPLDGADPQALGQQNR--GPTPFNQNQLHQLRAQIMAYKMLARGQ 194
Query: 346 --PRHLHVV----RPMSHYTTPMVLQQAAIPIQINVGTTVTMTGNGTRPPPTPNAEAP-- 397
P HL + RPM P + QQ +V T G G P P P P
Sbjct: 195 PLPDHLQMAVQGKRPM-----PGMQQQMPTLPPPSVSATGPGPGPGPGPGPGPGPAPPNY 249
Query: 398 --PPGPGQASSVAPSSTNVESSAEGAPPPGPAPPPATSHPRVIRISHQSVEPVVMMHMNI 455
P G G + P + V G PP GP P P P + S ++
Sbjct: 250 SRPHGMGGPNMPPPGPSGVPPGMPGQPPGGP-PKPWPEGPMANAAAPTSTPQKLIPPQPT 308
Query: 456 QDSGTQPGGVPSAPTGPLGPPGHGQTLGQQVPGFPTAPTRVVIARPTPPQ 505
P VP A P+ PP Q+ GQ P P +R TP Q
Sbjct: 309 GRPSPAPPAVPPA-ASPVMPP-QTQSPGQPAQPAPMVPLHQKQSRITPIQ 356
Score = 36.6 bits (83), Expect = 0.14
Identities = 39/128 (30%), Positives = 55/128 (42%), Gaps = 16/128 (12%)
Query: 187 GGPQPQHSQPPPQPPAVTPE-PVA-LSSQTSEPVE----------SEAPPREPMEAEEVE 234
G P QPP PP PE P+A ++ TS P + S APP P A V
Sbjct: 267 GVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPAASPVM 326
Query: 235 ERAPAQNPELTPGPAPAGPTPAPETNAP--NHPSPAEYVEVLQELQ-RLESRLQPFLQRY 291
Q+P PAP P ++ P + VE+LQE + RL++R+ +Q
Sbjct: 327 P-PQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRGLDPVEILQEREYRLQARIAHRIQEL 385
Query: 292 YEVLGAAA 299
+ G+ A
Sbjct: 386 ENLPGSLA 393
Score = 35.8 bits (81), Expect = 0.23
Identities = 67/282 (23%), Positives = 85/282 (30%), Gaps = 69/282 (24%)
Query: 420 GAPPPGPAPPPATSHPRVIRISHQSVEPVVMMHMNIQDSGTQPGGVPSAPTGPLGPPGHG 479
G P PGP+P P S ++ S G PG S GPP G
Sbjct: 10 GTPRPGPSPGPGPSPGAMLGPS----------------PGPSPGSAHSMMGPSPGPPSAG 53
Query: 480 QTLGQQVPGFPTAPTRVVIARPTPPQARPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLV 539
+ Q PG + +P P + Q G+G M SG
Sbjct: 54 HPIPTQGPGGYPQDNMHQMHKPMESMHEKGMSDDPRYN---QMKGMG-------MRSG-- 101
Query: 540 GQLLMQPVLVAQGTPGMAPPPAPATASASAGTTNTATTAGPAPGGPAQ----PPPTPQPS 595
G GM PPP+P + P+P G ++ P P PS
Sbjct: 102 ------------GHAGMGPPPSPMDQHSQGY---------PSPLGGSEHASSPVPASGPS 140
Query: 596 MADLQFSQLLGNLLGPAGPGAGGSGVASPT-----------ITVAMPGVPAFLQGMTDFL 644
S G L A P A G PT + + A Q + D L
Sbjct: 141 SGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQLRAQIMAYKMLARGQPLPDHL 200
Query: 645 QATQTAPPPPPPPPPPPPAPEQQTMPPPGSPSGGAGSPGGLG 686
Q P P P T+PPP + G G G G
Sbjct: 201 QMAVQGKRPMPGMQQQMP-----TLPPPSVSATGPGPGPGPG 237
Score = 33.5 bits (75), Expect = 1.2
Identities = 52/222 (23%), Positives = 72/222 (32%), Gaps = 74/222 (33%)
Query: 498 IARPTPPQARPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLVGQLLMQPVLVAQGTPGMA 557
++ P PP PG P G GA LG
Sbjct: 1 MSTPDPPLGGTPRPGPSPGPGPSPGAMLG------------------------------- 29
Query: 558 PPPAPATASASAGTTNTATTAGPAPGGPA--QPPPT------PQPSM------------- 596
P P P+ SA + GP+PG P+ P PT PQ +M
Sbjct: 30 PSPGPSPGSAH-------SMMGPSPGPPSAGHPIPTQGPGGYPQDNMHQMHKPMESMHEK 82
Query: 597 ---ADLQFSQLLGNLLGPAGPGAGGSGVASPTITVAMPGVPAFLQGMTDFLQATQTAPPP 653
D +++Q+ G +G G G G + G P+ L G +
Sbjct: 83 GMSDDPRYNQMKG--MGMRSGGHAGMGPPPSPMDQHSQGYPSPLGG---------SEHAS 131
Query: 654 PPPPPPPPPAPEQQTMPPPGSPSGGAGSPGGLGLESLSPEFF 695
P P P + Q + P G+P GA P LG ++ P F
Sbjct: 132 SPVPASGPSSGPQMSSGPGGAPLDGA-DPQALGQQNRGPTPF 172
Score = 32.0 bits (71), Expect = 3.4
Identities = 47/176 (26%), Positives = 65/176 (36%), Gaps = 15/176 (8%)
Query: 942 QPLPEE-PMEVQGAERASPEPQREN--------ASPAPGTTAEEAMSRGPPPAPEGGSRD 992
QPLP+ M VQG +R P Q++ ++ PG GP PAP SR
Sbjct: 194 QPLPDHLQMAVQG-KRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGPGPGPAPPNYSRP 252
Query: 993 EQDGASAETEPWAAAVPPEWVPIIQQDIQSQRKVKPQPPLSDAYLSGMPAKRRKTMQGEG 1052
G P + VPP + Q K P+ P+++A ++ Q G
Sbjct: 253 HGMGGPNMPPPGPSGVPP---GMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTG 309
Query: 1053 PQLLLSEAVSRAAKAAGARPLTSPESLSRDLEAPEVQESYRQQLRSDIQKRLQEDP 1108
AV AA SP ++ AP V +Q + IQK DP
Sbjct: 310 RPSPAPPAVPPAASPVMPPQTQSPGQPAQ--PAPMVPLHQKQSRITPIQKPRGLDP 363
Score = 31.6 bits (70), Expect = 4.4
Identities = 26/99 (26%), Positives = 35/99 (35%), Gaps = 15/99 (15%)
Query: 171 HMIRDIQTLLSRMECRGGPQPQHSQPPPQPPAVTPEPVALSSQTSEPVESEAPPREPMEA 230
H +R Q + +M RG P P H Q +A+ + P + P P +
Sbjct: 178 HQLR-AQIMAYKMLARGQPLPDHLQ------------MAVQGKRPMPGMQQQMPTLPPPS 224
Query: 231 EEVEERAPAQNPELTPGPAPAGPTPAPE--TNAPNHPSP 267
P P PGP PA P + PN P P
Sbjct: 225 VSATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPP 263
Score = 31.2 bits (69), Expect = 5.8
Identities = 27/99 (27%), Positives = 38/99 (38%), Gaps = 21/99 (21%)
Query: 938 GDPPQPLPEEPMEVQGAERASPE---PQRENASPAPGTTAEEAMSRGPPPAPEGGSRDEQ 994
G PP+P PE PM A ++P+ P + P+P PP P S
Sbjct: 278 GGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSP----------APPAVPPAASPVMP 327
Query: 995 DGASAETEPWAAAVPPEWVPIIQQD-----IQSQRKVKP 1028
+ +P A P VP+ Q+ IQ R + P
Sbjct: 328 PQTQSPGQP---AQPAPMVPLHQKQSRITPIQKPRGLDP 363
>gi|192807318 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform E [Homo sapiens]
Length = 1614
Score = 68.9 bits (167), Expect = 3e-11
Identities = 88/326 (26%), Positives = 119/326 (36%), Gaps = 45/326 (13%)
Query: 385 GTRPPPTPNAEAPPPGPGQASSVAPSSTNVESSAEGAPPPGPAPPPATSHPRVIR----- 439
G P P P+ P PGP + + PS SA P P PP A HP +
Sbjct: 9 GGTPRPGPS---PGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSA-GHPIPTQGPGGY 64
Query: 440 ---ISHQSVEPVVMMH----------MNIQDSGTQPGGVPSAPTGPLGPPGHGQTLGQQV 486
HQ +P+ MH ++ G + GG P H Q +
Sbjct: 65 PQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGYPSPL 124
Query: 487 PGFPTAPTRVVIARPTPPQARPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLVGQL---L 543
G A + V + P+ S PGG P+ G A N + QL +
Sbjct: 125 GGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQLRAQI 184
Query: 544 MQPVLVAQGTP----------GMAPPPAPATASASAGTTN-TATTAGPAPGGPAQPPPTP 592
M ++A+G P G P P + + +AT GP PG P P P
Sbjct: 185 MAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPG----PGPGP 240
Query: 593 QPSMADLQFSQLLGNLLGPAGPGAGGSGVASPTITVAMPGVP--AFLQG-MTDFLQATQT 649
P A +S+ G + GP P G SGV P + PG P + +G M + T T
Sbjct: 241 GPGPAPPNYSRPHG-MGGPNMPPPGPSGV-PPGMPGQPPGGPPKPWPEGPMANAAAPTST 298
Query: 650 APPPPPPPPPPPPAPEQQTMPPPGSP 675
PP P P+P +PP SP
Sbjct: 299 PQKLIPPQPTGRPSPAPPAVPPAASP 324
Score = 44.7 bits (104), Expect = 5e-04
Identities = 56/209 (26%), Positives = 63/209 (30%), Gaps = 90/209 (43%)
Query: 386 TRPPPTPNAEAPPPGPGQASSVAPSSTNVESSAEGAPPPGPAP-PPATSHPRVIRISHQS 444
T PPP+ +A P PGPG P PGP P PP S P +
Sbjct: 219 TLPPPSVSATGPGPGPGPG-----------------PGPGPGPAPPNYSRPHGM------ 255
Query: 445 VEPVVMMHMNIQDSGTQPGGVPSAPTGPLGPPGHGQTLGQQVPGFPTAPTRVVIARPTPP 504
GG P GP G P PG P P
Sbjct: 256 ------------------GGPNMPPPGPSGVP----------PGMPGQP----------- 276
Query: 505 QARPSHPGGPPV---SGTLQGAGLGTNASLAQMVSGLVGQLLMQPVLVAQGTPGMAPPPA 561
PGGPP G + A T+ Q L+ P G P APP
Sbjct: 277 ------PGGPPKPWPEGPMANAAAPTSTP----------QKLIPPQ--PTGRPSPAPPAV 318
Query: 562 PATASASAGTTNTATTAGPAPGGPAQPPP 590
P AS +PG PAQP P
Sbjct: 319 PPAASP------VMPPQTQSPGQPAQPAP 341
Score = 40.4 bits (93), Expect = 0.010
Identities = 84/350 (24%), Positives = 116/350 (33%), Gaps = 58/350 (16%)
Query: 188 GPQP--QHSQPPPQP-PAVTPEPVALSSQTSEPVESEAPPREPMEAEEVEERAPAQNPEL 244
GP P HS P P P P+ P ++ +PME+ + E+ + +P
Sbjct: 33 GPSPGSAHSMMGPSPGPPSAGHPIPTQGPGGYPQDNMHQMHKPMES--MHEKGMSDDPRY 90
Query: 245 TP---------GPAPAGPTPAP-ETNAPNHPSPAEYVEVLQELQRLESRLQPFLQRYYEV 294
G A GP P+P + ++ +PSP L E P
Sbjct: 91 NQMKGMGMRSGGHAGMGPPPSPMDQHSQGYPSP---------LGGSEHASSPV-----PA 136
Query: 295 LGAAATTDYNNNHEGREEDQRLINLVGESLRLLGNTFV---ALSDLRCNLACTP------ 345
G ++ ++ G D +G+ R G T L LR +
Sbjct: 137 SGPSSGPQMSSGPGGAPLDGADPQALGQQNR--GPTPFNQNQLHQLRAQIMAYKMLARGQ 194
Query: 346 --PRHLHVV----RPMSHYTTPMVLQQAAIPIQINVGTTVTMTGNGTRPPPTPNAEAP-- 397
P HL + RPM P + QQ +V T G G P P P P
Sbjct: 195 PLPDHLQMAVQGKRPM-----PGMQQQMPTLPPPSVSATGPGPGPGPGPGPGPGPAPPNY 249
Query: 398 --PPGPGQASSVAPSSTNVESSAEGAPPPGPAPPPATSHPRVIRISHQSVEPVVMMHMNI 455
P G G + P + V G PP GP P P P + S ++
Sbjct: 250 SRPHGMGGPNMPPPGPSGVPPGMPGQPPGGP-PKPWPEGPMANAAAPTSTPQKLIPPQPT 308
Query: 456 QDSGTQPGGVPSAPTGPLGPPGHGQTLGQQVPGFPTAPTRVVIARPTPPQ 505
P VP A P+ PP Q+ GQ P P +R TP Q
Sbjct: 309 GRPSPAPPAVPPA-ASPVMPP-QTQSPGQPAQPAPMVPLHQKQSRITPIQ 356
Score = 36.6 bits (83), Expect = 0.14
Identities = 39/128 (30%), Positives = 55/128 (42%), Gaps = 16/128 (12%)
Query: 187 GGPQPQHSQPPPQPPAVTPE-PVA-LSSQTSEPVE----------SEAPPREPMEAEEVE 234
G P QPP PP PE P+A ++ TS P + S APP P A V
Sbjct: 267 GVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPAASPVM 326
Query: 235 ERAPAQNPELTPGPAPAGPTPAPETNAP--NHPSPAEYVEVLQELQ-RLESRLQPFLQRY 291
Q+P PAP P ++ P + VE+LQE + RL++R+ +Q
Sbjct: 327 P-PQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRGLDPVEILQEREYRLQARIAHRIQEL 385
Query: 292 YEVLGAAA 299
+ G+ A
Sbjct: 386 ENLPGSLA 393
Score = 35.8 bits (81), Expect = 0.23
Identities = 67/282 (23%), Positives = 85/282 (30%), Gaps = 69/282 (24%)
Query: 420 GAPPPGPAPPPATSHPRVIRISHQSVEPVVMMHMNIQDSGTQPGGVPSAPTGPLGPPGHG 479
G P PGP+P P S ++ S G PG S GPP G
Sbjct: 10 GTPRPGPSPGPGPSPGAMLGPS----------------PGPSPGSAHSMMGPSPGPPSAG 53
Query: 480 QTLGQQVPGFPTAPTRVVIARPTPPQARPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLV 539
+ Q PG + +P P + Q G+G M SG
Sbjct: 54 HPIPTQGPGGYPQDNMHQMHKPMESMHEKGMSDDPRYN---QMKGMG-------MRSG-- 101
Query: 540 GQLLMQPVLVAQGTPGMAPPPAPATASASAGTTNTATTAGPAPGGPAQ----PPPTPQPS 595
G GM PPP+P + P+P G ++ P P PS
Sbjct: 102 ------------GHAGMGPPPSPMDQHSQGY---------PSPLGGSEHASSPVPASGPS 140
Query: 596 MADLQFSQLLGNLLGPAGPGAGGSGVASPT-----------ITVAMPGVPAFLQGMTDFL 644
S G L A P A G PT + + A Q + D L
Sbjct: 141 SGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQLRAQIMAYKMLARGQPLPDHL 200
Query: 645 QATQTAPPPPPPPPPPPPAPEQQTMPPPGSPSGGAGSPGGLG 686
Q P P P T+PPP + G G G G
Sbjct: 201 QMAVQGKRPMPGMQQQMP-----TLPPPSVSATGPGPGPGPG 237
Score = 33.5 bits (75), Expect = 1.2
Identities = 52/222 (23%), Positives = 72/222 (32%), Gaps = 74/222 (33%)
Query: 498 IARPTPPQARPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLVGQLLMQPVLVAQGTPGMA 557
++ P PP PG P G GA LG
Sbjct: 1 MSTPDPPLGGTPRPGPSPGPGPSPGAMLG------------------------------- 29
Query: 558 PPPAPATASASAGTTNTATTAGPAPGGPA--QPPPT------PQPSM------------- 596
P P P+ SA + GP+PG P+ P PT PQ +M
Sbjct: 30 PSPGPSPGSAH-------SMMGPSPGPPSAGHPIPTQGPGGYPQDNMHQMHKPMESMHEK 82
Query: 597 ---ADLQFSQLLGNLLGPAGPGAGGSGVASPTITVAMPGVPAFLQGMTDFLQATQTAPPP 653
D +++Q+ G +G G G G + G P+ L G +
Sbjct: 83 GMSDDPRYNQMKG--MGMRSGGHAGMGPPPSPMDQHSQGYPSPLGG---------SEHAS 131
Query: 654 PPPPPPPPPAPEQQTMPPPGSPSGGAGSPGGLGLESLSPEFF 695
P P P + Q + P G+P GA P LG ++ P F
Sbjct: 132 SPVPASGPSSGPQMSSGPGGAPLDGA-DPQALGQQNRGPTPF 172
Score = 32.0 bits (71), Expect = 3.4
Identities = 47/176 (26%), Positives = 65/176 (36%), Gaps = 15/176 (8%)
Query: 942 QPLPEE-PMEVQGAERASPEPQREN--------ASPAPGTTAEEAMSRGPPPAPEGGSRD 992
QPLP+ M VQG +R P Q++ ++ PG GP PAP SR
Sbjct: 194 QPLPDHLQMAVQG-KRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGPGPGPAPPNYSRP 252
Query: 993 EQDGASAETEPWAAAVPPEWVPIIQQDIQSQRKVKPQPPLSDAYLSGMPAKRRKTMQGEG 1052
G P + VPP + Q K P+ P+++A ++ Q G
Sbjct: 253 HGMGGPNMPPPGPSGVPP---GMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTG 309
Query: 1053 PQLLLSEAVSRAAKAAGARPLTSPESLSRDLEAPEVQESYRQQLRSDIQKRLQEDP 1108
AV AA SP ++ AP V +Q + IQK DP
Sbjct: 310 RPSPAPPAVPPAASPVMPPQTQSPGQPAQ--PAPMVPLHQKQSRITPIQKPRGLDP 363
Score = 31.6 bits (70), Expect = 4.4
Identities = 26/99 (26%), Positives = 35/99 (35%), Gaps = 15/99 (15%)
Query: 171 HMIRDIQTLLSRMECRGGPQPQHSQPPPQPPAVTPEPVALSSQTSEPVESEAPPREPMEA 230
H +R Q + +M RG P P H Q +A+ + P + P P +
Sbjct: 178 HQLR-AQIMAYKMLARGQPLPDHLQ------------MAVQGKRPMPGMQQQMPTLPPPS 224
Query: 231 EEVEERAPAQNPELTPGPAPAGPTPAPE--TNAPNHPSP 267
P P PGP PA P + PN P P
Sbjct: 225 VSATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPP 263
Score = 31.2 bits (69), Expect = 5.8
Identities = 27/99 (27%), Positives = 38/99 (38%), Gaps = 21/99 (21%)
Query: 938 GDPPQPLPEEPMEVQGAERASPE---PQRENASPAPGTTAEEAMSRGPPPAPEGGSRDEQ 994
G PP+P PE PM A ++P+ P + P+P PP P S
Sbjct: 278 GGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSP----------APPAVPPAASPVMP 327
Query: 995 DGASAETEPWAAAVPPEWVPIIQQD-----IQSQRKVKP 1028
+ +P A P VP+ Q+ IQ R + P
Sbjct: 328 PQTQSPGQP---AQPAPMVPLHQKQSRITPIQKPRGLDP 363
>gi|192807316 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform D [Homo sapiens]
Length = 1616
Score = 68.9 bits (167), Expect = 3e-11
Identities = 88/326 (26%), Positives = 119/326 (36%), Gaps = 45/326 (13%)
Query: 385 GTRPPPTPNAEAPPPGPGQASSVAPSSTNVESSAEGAPPPGPAPPPATSHPRVIR----- 439
G P P P+ P PGP + + PS SA P P PP A HP +
Sbjct: 9 GGTPRPGPS---PGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSA-GHPIPTQGPGGY 64
Query: 440 ---ISHQSVEPVVMMH----------MNIQDSGTQPGGVPSAPTGPLGPPGHGQTLGQQV 486
HQ +P+ MH ++ G + GG P H Q +
Sbjct: 65 PQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGYPSPL 124
Query: 487 PGFPTAPTRVVIARPTPPQARPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLVGQL---L 543
G A + V + P+ S PGG P+ G A N + QL +
Sbjct: 125 GGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQLRAQI 184
Query: 544 MQPVLVAQGTP----------GMAPPPAPATASASAGTTN-TATTAGPAPGGPAQPPPTP 592
M ++A+G P G P P + + +AT GP PG P P P
Sbjct: 185 MAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPG----PGPGP 240
Query: 593 QPSMADLQFSQLLGNLLGPAGPGAGGSGVASPTITVAMPGVP--AFLQG-MTDFLQATQT 649
P A +S+ G + GP P G SGV P + PG P + +G M + T T
Sbjct: 241 GPGPAPPNYSRPHG-MGGPNMPPPGPSGV-PPGMPGQPPGGPPKPWPEGPMANAAAPTST 298
Query: 650 APPPPPPPPPPPPAPEQQTMPPPGSP 675
PP P P+P +PP SP
Sbjct: 299 PQKLIPPQPTGRPSPAPPAVPPAASP 324
Score = 44.7 bits (104), Expect = 5e-04
Identities = 56/209 (26%), Positives = 63/209 (30%), Gaps = 90/209 (43%)
Query: 386 TRPPPTPNAEAPPPGPGQASSVAPSSTNVESSAEGAPPPGPAP-PPATSHPRVIRISHQS 444
T PPP+ +A P PGPG P PGP P PP S P +
Sbjct: 219 TLPPPSVSATGPGPGPGPG-----------------PGPGPGPAPPNYSRPHGM------ 255
Query: 445 VEPVVMMHMNIQDSGTQPGGVPSAPTGPLGPPGHGQTLGQQVPGFPTAPTRVVIARPTPP 504
GG P GP G P PG P P
Sbjct: 256 ------------------GGPNMPPPGPSGVP----------PGMPGQP----------- 276
Query: 505 QARPSHPGGPPV---SGTLQGAGLGTNASLAQMVSGLVGQLLMQPVLVAQGTPGMAPPPA 561
PGGPP G + A T+ Q L+ P G P APP
Sbjct: 277 ------PGGPPKPWPEGPMANAAAPTSTP----------QKLIPPQ--PTGRPSPAPPAV 318
Query: 562 PATASASAGTTNTATTAGPAPGGPAQPPP 590
P AS +PG PAQP P
Sbjct: 319 PPAASP------VMPPQTQSPGQPAQPAP 341
Score = 40.4 bits (93), Expect = 0.010
Identities = 84/350 (24%), Positives = 116/350 (33%), Gaps = 58/350 (16%)
Query: 188 GPQP--QHSQPPPQP-PAVTPEPVALSSQTSEPVESEAPPREPMEAEEVEERAPAQNPEL 244
GP P HS P P P P+ P ++ +PME+ + E+ + +P
Sbjct: 33 GPSPGSAHSMMGPSPGPPSAGHPIPTQGPGGYPQDNMHQMHKPMES--MHEKGMSDDPRY 90
Query: 245 TP---------GPAPAGPTPAP-ETNAPNHPSPAEYVEVLQELQRLESRLQPFLQRYYEV 294
G A GP P+P + ++ +PSP L E P
Sbjct: 91 NQMKGMGMRSGGHAGMGPPPSPMDQHSQGYPSP---------LGGSEHASSPV-----PA 136
Query: 295 LGAAATTDYNNNHEGREEDQRLINLVGESLRLLGNTFV---ALSDLRCNLACTP------ 345
G ++ ++ G D +G+ R G T L LR +
Sbjct: 137 SGPSSGPQMSSGPGGAPLDGADPQALGQQNR--GPTPFNQNQLHQLRAQIMAYKMLARGQ 194
Query: 346 --PRHLHVV----RPMSHYTTPMVLQQAAIPIQINVGTTVTMTGNGTRPPPTPNAEAP-- 397
P HL + RPM P + QQ +V T G G P P P P
Sbjct: 195 PLPDHLQMAVQGKRPM-----PGMQQQMPTLPPPSVSATGPGPGPGPGPGPGPGPAPPNY 249
Query: 398 --PPGPGQASSVAPSSTNVESSAEGAPPPGPAPPPATSHPRVIRISHQSVEPVVMMHMNI 455
P G G + P + V G PP GP P P P + S ++
Sbjct: 250 SRPHGMGGPNMPPPGPSGVPPGMPGQPPGGP-PKPWPEGPMANAAAPTSTPQKLIPPQPT 308
Query: 456 QDSGTQPGGVPSAPTGPLGPPGHGQTLGQQVPGFPTAPTRVVIARPTPPQ 505
P VP A P+ PP Q+ GQ P P +R TP Q
Sbjct: 309 GRPSPAPPAVPPA-ASPVMPP-QTQSPGQPAQPAPMVPLHQKQSRITPIQ 356
Score = 36.6 bits (83), Expect = 0.14
Identities = 39/128 (30%), Positives = 55/128 (42%), Gaps = 16/128 (12%)
Query: 187 GGPQPQHSQPPPQPPAVTPE-PVA-LSSQTSEPVE----------SEAPPREPMEAEEVE 234
G P QPP PP PE P+A ++ TS P + S APP P A V
Sbjct: 267 GVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPAASPVM 326
Query: 235 ERAPAQNPELTPGPAPAGPTPAPETNAP--NHPSPAEYVEVLQELQ-RLESRLQPFLQRY 291
Q+P PAP P ++ P + VE+LQE + RL++R+ +Q
Sbjct: 327 P-PQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRGLDPVEILQEREYRLQARIAHRIQEL 385
Query: 292 YEVLGAAA 299
+ G+ A
Sbjct: 386 ENLPGSLA 393
Score = 35.8 bits (81), Expect = 0.23
Identities = 67/282 (23%), Positives = 85/282 (30%), Gaps = 69/282 (24%)
Query: 420 GAPPPGPAPPPATSHPRVIRISHQSVEPVVMMHMNIQDSGTQPGGVPSAPTGPLGPPGHG 479
G P PGP+P P S ++ S G PG S GPP G
Sbjct: 10 GTPRPGPSPGPGPSPGAMLGPS----------------PGPSPGSAHSMMGPSPGPPSAG 53
Query: 480 QTLGQQVPGFPTAPTRVVIARPTPPQARPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLV 539
+ Q PG + +P P + Q G+G M SG
Sbjct: 54 HPIPTQGPGGYPQDNMHQMHKPMESMHEKGMSDDPRYN---QMKGMG-------MRSG-- 101
Query: 540 GQLLMQPVLVAQGTPGMAPPPAPATASASAGTTNTATTAGPAPGGPAQ----PPPTPQPS 595
G GM PPP+P + P+P G ++ P P PS
Sbjct: 102 ------------GHAGMGPPPSPMDQHSQGY---------PSPLGGSEHASSPVPASGPS 140
Query: 596 MADLQFSQLLGNLLGPAGPGAGGSGVASPT-----------ITVAMPGVPAFLQGMTDFL 644
S G L A P A G PT + + A Q + D L
Sbjct: 141 SGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQLRAQIMAYKMLARGQPLPDHL 200
Query: 645 QATQTAPPPPPPPPPPPPAPEQQTMPPPGSPSGGAGSPGGLG 686
Q P P P T+PPP + G G G G
Sbjct: 201 QMAVQGKRPMPGMQQQMP-----TLPPPSVSATGPGPGPGPG 237
Score = 33.5 bits (75), Expect = 1.2
Identities = 52/222 (23%), Positives = 72/222 (32%), Gaps = 74/222 (33%)
Query: 498 IARPTPPQARPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLVGQLLMQPVLVAQGTPGMA 557
++ P PP PG P G GA LG
Sbjct: 1 MSTPDPPLGGTPRPGPSPGPGPSPGAMLG------------------------------- 29
Query: 558 PPPAPATASASAGTTNTATTAGPAPGGPA--QPPPT------PQPSM------------- 596
P P P+ SA + GP+PG P+ P PT PQ +M
Sbjct: 30 PSPGPSPGSAH-------SMMGPSPGPPSAGHPIPTQGPGGYPQDNMHQMHKPMESMHEK 82
Query: 597 ---ADLQFSQLLGNLLGPAGPGAGGSGVASPTITVAMPGVPAFLQGMTDFLQATQTAPPP 653
D +++Q+ G +G G G G + G P+ L G +
Sbjct: 83 GMSDDPRYNQMKG--MGMRSGGHAGMGPPPSPMDQHSQGYPSPLGG---------SEHAS 131
Query: 654 PPPPPPPPPAPEQQTMPPPGSPSGGAGSPGGLGLESLSPEFF 695
P P P + Q + P G+P GA P LG ++ P F
Sbjct: 132 SPVPASGPSSGPQMSSGPGGAPLDGA-DPQALGQQNRGPTPF 172
Score = 32.0 bits (71), Expect = 3.4
Identities = 47/176 (26%), Positives = 65/176 (36%), Gaps = 15/176 (8%)
Query: 942 QPLPEE-PMEVQGAERASPEPQREN--------ASPAPGTTAEEAMSRGPPPAPEGGSRD 992
QPLP+ M VQG +R P Q++ ++ PG GP PAP SR
Sbjct: 194 QPLPDHLQMAVQG-KRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGPGPGPAPPNYSRP 252
Query: 993 EQDGASAETEPWAAAVPPEWVPIIQQDIQSQRKVKPQPPLSDAYLSGMPAKRRKTMQGEG 1052
G P + VPP + Q K P+ P+++A ++ Q G
Sbjct: 253 HGMGGPNMPPPGPSGVPP---GMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTG 309
Query: 1053 PQLLLSEAVSRAAKAAGARPLTSPESLSRDLEAPEVQESYRQQLRSDIQKRLQEDP 1108
AV AA SP ++ AP V +Q + IQK DP
Sbjct: 310 RPSPAPPAVPPAASPVMPPQTQSPGQPAQ--PAPMVPLHQKQSRITPIQKPRGLDP 363
Score = 31.6 bits (70), Expect = 4.4
Identities = 26/99 (26%), Positives = 35/99 (35%), Gaps = 15/99 (15%)
Query: 171 HMIRDIQTLLSRMECRGGPQPQHSQPPPQPPAVTPEPVALSSQTSEPVESEAPPREPMEA 230
H +R Q + +M RG P P H Q +A+ + P + P P +
Sbjct: 178 HQLR-AQIMAYKMLARGQPLPDHLQ------------MAVQGKRPMPGMQQQMPTLPPPS 224
Query: 231 EEVEERAPAQNPELTPGPAPAGPTPAPE--TNAPNHPSP 267
P P PGP PA P + PN P P
Sbjct: 225 VSATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPP 263
Score = 31.2 bits (69), Expect = 5.8
Identities = 27/99 (27%), Positives = 38/99 (38%), Gaps = 21/99 (21%)
Query: 938 GDPPQPLPEEPMEVQGAERASPE---PQRENASPAPGTTAEEAMSRGPPPAPEGGSRDEQ 994
G PP+P PE PM A ++P+ P + P+P PP P S
Sbjct: 278 GGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSP----------APPAVPPAASPVMP 327
Query: 995 DGASAETEPWAAAVPPEWVPIIQQD-----IQSQRKVKP 1028
+ +P A P VP+ Q+ IQ R + P
Sbjct: 328 PQTQSPGQP---AQPAPMVPLHQKQSRITPIQKPRGLDP 363
>gi|192807314 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform C [Homo sapiens]
Length = 1617
Score = 68.9 bits (167), Expect = 3e-11
Identities = 88/326 (26%), Positives = 119/326 (36%), Gaps = 45/326 (13%)
Query: 385 GTRPPPTPNAEAPPPGPGQASSVAPSSTNVESSAEGAPPPGPAPPPATSHPRVIR----- 439
G P P P+ P PGP + + PS SA P P PP A HP +
Sbjct: 9 GGTPRPGPS---PGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSA-GHPIPTQGPGGY 64
Query: 440 ---ISHQSVEPVVMMH----------MNIQDSGTQPGGVPSAPTGPLGPPGHGQTLGQQV 486
HQ +P+ MH ++ G + GG P H Q +
Sbjct: 65 PQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGYPSPL 124
Query: 487 PGFPTAPTRVVIARPTPPQARPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLVGQL---L 543
G A + V + P+ S PGG P+ G A N + QL +
Sbjct: 125 GGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQLRAQI 184
Query: 544 MQPVLVAQGTP----------GMAPPPAPATASASAGTTN-TATTAGPAPGGPAQPPPTP 592
M ++A+G P G P P + + +AT GP PG P P P
Sbjct: 185 MAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPG----PGPGP 240
Query: 593 QPSMADLQFSQLLGNLLGPAGPGAGGSGVASPTITVAMPGVP--AFLQG-MTDFLQATQT 649
P A +S+ G + GP P G SGV P + PG P + +G M + T T
Sbjct: 241 GPGPAPPNYSRPHG-MGGPNMPPPGPSGV-PPGMPGQPPGGPPKPWPEGPMANAAAPTST 298
Query: 650 APPPPPPPPPPPPAPEQQTMPPPGSP 675
PP P P+P +PP SP
Sbjct: 299 PQKLIPPQPTGRPSPAPPAVPPAASP 324
Score = 44.7 bits (104), Expect = 5e-04
Identities = 56/209 (26%), Positives = 63/209 (30%), Gaps = 90/209 (43%)
Query: 386 TRPPPTPNAEAPPPGPGQASSVAPSSTNVESSAEGAPPPGPAP-PPATSHPRVIRISHQS 444
T PPP+ +A P PGPG P PGP P PP S P +
Sbjct: 219 TLPPPSVSATGPGPGPGPG-----------------PGPGPGPAPPNYSRPHGM------ 255
Query: 445 VEPVVMMHMNIQDSGTQPGGVPSAPTGPLGPPGHGQTLGQQVPGFPTAPTRVVIARPTPP 504
GG P GP G P PG P P
Sbjct: 256 ------------------GGPNMPPPGPSGVP----------PGMPGQP----------- 276
Query: 505 QARPSHPGGPPV---SGTLQGAGLGTNASLAQMVSGLVGQLLMQPVLVAQGTPGMAPPPA 561
PGGPP G + A T+ Q L+ P G P APP
Sbjct: 277 ------PGGPPKPWPEGPMANAAAPTSTP----------QKLIPPQ--PTGRPSPAPPAV 318
Query: 562 PATASASAGTTNTATTAGPAPGGPAQPPP 590
P AS +PG PAQP P
Sbjct: 319 PPAASP------VMPPQTQSPGQPAQPAP 341
Score = 40.4 bits (93), Expect = 0.010
Identities = 84/350 (24%), Positives = 116/350 (33%), Gaps = 58/350 (16%)
Query: 188 GPQP--QHSQPPPQP-PAVTPEPVALSSQTSEPVESEAPPREPMEAEEVEERAPAQNPEL 244
GP P HS P P P P+ P ++ +PME+ + E+ + +P
Sbjct: 33 GPSPGSAHSMMGPSPGPPSAGHPIPTQGPGGYPQDNMHQMHKPMES--MHEKGMSDDPRY 90
Query: 245 TP---------GPAPAGPTPAP-ETNAPNHPSPAEYVEVLQELQRLESRLQPFLQRYYEV 294
G A GP P+P + ++ +PSP L E P
Sbjct: 91 NQMKGMGMRSGGHAGMGPPPSPMDQHSQGYPSP---------LGGSEHASSPV-----PA 136
Query: 295 LGAAATTDYNNNHEGREEDQRLINLVGESLRLLGNTFV---ALSDLRCNLACTP------ 345
G ++ ++ G D +G+ R G T L LR +
Sbjct: 137 SGPSSGPQMSSGPGGAPLDGADPQALGQQNR--GPTPFNQNQLHQLRAQIMAYKMLARGQ 194
Query: 346 --PRHLHVV----RPMSHYTTPMVLQQAAIPIQINVGTTVTMTGNGTRPPPTPNAEAP-- 397
P HL + RPM P + QQ +V T G G P P P P
Sbjct: 195 PLPDHLQMAVQGKRPM-----PGMQQQMPTLPPPSVSATGPGPGPGPGPGPGPGPAPPNY 249
Query: 398 --PPGPGQASSVAPSSTNVESSAEGAPPPGPAPPPATSHPRVIRISHQSVEPVVMMHMNI 455
P G G + P + V G PP GP P P P + S ++
Sbjct: 250 SRPHGMGGPNMPPPGPSGVPPGMPGQPPGGP-PKPWPEGPMANAAAPTSTPQKLIPPQPT 308
Query: 456 QDSGTQPGGVPSAPTGPLGPPGHGQTLGQQVPGFPTAPTRVVIARPTPPQ 505
P VP A P+ PP Q+ GQ P P +R TP Q
Sbjct: 309 GRPSPAPPAVPPA-ASPVMPP-QTQSPGQPAQPAPMVPLHQKQSRITPIQ 356
Score = 36.6 bits (83), Expect = 0.14
Identities = 39/128 (30%), Positives = 55/128 (42%), Gaps = 16/128 (12%)
Query: 187 GGPQPQHSQPPPQPPAVTPE-PVA-LSSQTSEPVE----------SEAPPREPMEAEEVE 234
G P QPP PP PE P+A ++ TS P + S APP P A V
Sbjct: 267 GVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPAASPVM 326
Query: 235 ERAPAQNPELTPGPAPAGPTPAPETNAP--NHPSPAEYVEVLQELQ-RLESRLQPFLQRY 291
Q+P PAP P ++ P + VE+LQE + RL++R+ +Q
Sbjct: 327 P-PQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRGLDPVEILQEREYRLQARIAHRIQEL 385
Query: 292 YEVLGAAA 299
+ G+ A
Sbjct: 386 ENLPGSLA 393
Score = 35.8 bits (81), Expect = 0.23
Identities = 67/282 (23%), Positives = 85/282 (30%), Gaps = 69/282 (24%)
Query: 420 GAPPPGPAPPPATSHPRVIRISHQSVEPVVMMHMNIQDSGTQPGGVPSAPTGPLGPPGHG 479
G P PGP+P P S ++ S G PG S GPP G
Sbjct: 10 GTPRPGPSPGPGPSPGAMLGPS----------------PGPSPGSAHSMMGPSPGPPSAG 53
Query: 480 QTLGQQVPGFPTAPTRVVIARPTPPQARPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLV 539
+ Q PG + +P P + Q G+G M SG
Sbjct: 54 HPIPTQGPGGYPQDNMHQMHKPMESMHEKGMSDDPRYN---QMKGMG-------MRSG-- 101
Query: 540 GQLLMQPVLVAQGTPGMAPPPAPATASASAGTTNTATTAGPAPGGPAQ----PPPTPQPS 595
G GM PPP+P + P+P G ++ P P PS
Sbjct: 102 ------------GHAGMGPPPSPMDQHSQGY---------PSPLGGSEHASSPVPASGPS 140
Query: 596 MADLQFSQLLGNLLGPAGPGAGGSGVASPT-----------ITVAMPGVPAFLQGMTDFL 644
S G L A P A G PT + + A Q + D L
Sbjct: 141 SGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQLRAQIMAYKMLARGQPLPDHL 200
Query: 645 QATQTAPPPPPPPPPPPPAPEQQTMPPPGSPSGGAGSPGGLG 686
Q P P P T+PPP + G G G G
Sbjct: 201 QMAVQGKRPMPGMQQQMP-----TLPPPSVSATGPGPGPGPG 237
Score = 33.5 bits (75), Expect = 1.2
Identities = 52/222 (23%), Positives = 72/222 (32%), Gaps = 74/222 (33%)
Query: 498 IARPTPPQARPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLVGQLLMQPVLVAQGTPGMA 557
++ P PP PG P G GA LG
Sbjct: 1 MSTPDPPLGGTPRPGPSPGPGPSPGAMLG------------------------------- 29
Query: 558 PPPAPATASASAGTTNTATTAGPAPGGPA--QPPPT------PQPSM------------- 596
P P P+ SA + GP+PG P+ P PT PQ +M
Sbjct: 30 PSPGPSPGSAH-------SMMGPSPGPPSAGHPIPTQGPGGYPQDNMHQMHKPMESMHEK 82
Query: 597 ---ADLQFSQLLGNLLGPAGPGAGGSGVASPTITVAMPGVPAFLQGMTDFLQATQTAPPP 653
D +++Q+ G +G G G G + G P+ L G +
Sbjct: 83 GMSDDPRYNQMKG--MGMRSGGHAGMGPPPSPMDQHSQGYPSPLGG---------SEHAS 131
Query: 654 PPPPPPPPPAPEQQTMPPPGSPSGGAGSPGGLGLESLSPEFF 695
P P P + Q + P G+P GA P LG ++ P F
Sbjct: 132 SPVPASGPSSGPQMSSGPGGAPLDGA-DPQALGQQNRGPTPF 172
Score = 32.0 bits (71), Expect = 3.4
Identities = 47/176 (26%), Positives = 65/176 (36%), Gaps = 15/176 (8%)
Query: 942 QPLPEE-PMEVQGAERASPEPQREN--------ASPAPGTTAEEAMSRGPPPAPEGGSRD 992
QPLP+ M VQG +R P Q++ ++ PG GP PAP SR
Sbjct: 194 QPLPDHLQMAVQG-KRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGPGPGPAPPNYSRP 252
Query: 993 EQDGASAETEPWAAAVPPEWVPIIQQDIQSQRKVKPQPPLSDAYLSGMPAKRRKTMQGEG 1052
G P + VPP + Q K P+ P+++A ++ Q G
Sbjct: 253 HGMGGPNMPPPGPSGVPP---GMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTG 309
Query: 1053 PQLLLSEAVSRAAKAAGARPLTSPESLSRDLEAPEVQESYRQQLRSDIQKRLQEDP 1108
AV AA SP ++ AP V +Q + IQK DP
Sbjct: 310 RPSPAPPAVPPAASPVMPPQTQSPGQPAQ--PAPMVPLHQKQSRITPIQKPRGLDP 363
Score = 31.6 bits (70), Expect = 4.4
Identities = 26/99 (26%), Positives = 35/99 (35%), Gaps = 15/99 (15%)
Query: 171 HMIRDIQTLLSRMECRGGPQPQHSQPPPQPPAVTPEPVALSSQTSEPVESEAPPREPMEA 230
H +R Q + +M RG P P H Q +A+ + P + P P +
Sbjct: 178 HQLR-AQIMAYKMLARGQPLPDHLQ------------MAVQGKRPMPGMQQQMPTLPPPS 224
Query: 231 EEVEERAPAQNPELTPGPAPAGPTPAPE--TNAPNHPSP 267
P P PGP PA P + PN P P
Sbjct: 225 VSATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPP 263
Score = 31.2 bits (69), Expect = 5.8
Identities = 27/99 (27%), Positives = 38/99 (38%), Gaps = 21/99 (21%)
Query: 938 GDPPQPLPEEPMEVQGAERASPE---PQRENASPAPGTTAEEAMSRGPPPAPEGGSRDEQ 994
G PP+P PE PM A ++P+ P + P+P PP P S
Sbjct: 278 GGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSP----------APPAVPPAASPVMP 327
Query: 995 DGASAETEPWAAAVPPEWVPIIQQD-----IQSQRKVKP 1028
+ +P A P VP+ Q+ IQ R + P
Sbjct: 328 PQTQSPGQP---AQPAPMVPLHQKQSRITPIQKPRGLDP 363
>gi|192807312 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform B [Homo sapiens]
Length = 1647
Score = 68.9 bits (167), Expect = 3e-11
Identities = 88/326 (26%), Positives = 119/326 (36%), Gaps = 45/326 (13%)
Query: 385 GTRPPPTPNAEAPPPGPGQASSVAPSSTNVESSAEGAPPPGPAPPPATSHPRVIR----- 439
G P P P+ P PGP + + PS SA P P PP A HP +
Sbjct: 9 GGTPRPGPS---PGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSA-GHPIPTQGPGGY 64
Query: 440 ---ISHQSVEPVVMMH----------MNIQDSGTQPGGVPSAPTGPLGPPGHGQTLGQQV 486
HQ +P+ MH ++ G + GG P H Q +
Sbjct: 65 PQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGYPSPL 124
Query: 487 PGFPTAPTRVVIARPTPPQARPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLVGQL---L 543
G A + V + P+ S PGG P+ G A N + QL +
Sbjct: 125 GGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQLRAQI 184
Query: 544 MQPVLVAQGTP----------GMAPPPAPATASASAGTTN-TATTAGPAPGGPAQPPPTP 592
M ++A+G P G P P + + +AT GP PG P P P
Sbjct: 185 MAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPG----PGPGP 240
Query: 593 QPSMADLQFSQLLGNLLGPAGPGAGGSGVASPTITVAMPGVP--AFLQG-MTDFLQATQT 649
P A +S+ G + GP P G SGV P + PG P + +G M + T T
Sbjct: 241 GPGPAPPNYSRPHG-MGGPNMPPPGPSGV-PPGMPGQPPGGPPKPWPEGPMANAAAPTST 298
Query: 650 APPPPPPPPPPPPAPEQQTMPPPGSP 675
PP P P+P +PP SP
Sbjct: 299 PQKLIPPQPTGRPSPAPPAVPPAASP 324
Score = 44.7 bits (104), Expect = 5e-04
Identities = 56/209 (26%), Positives = 63/209 (30%), Gaps = 90/209 (43%)
Query: 386 TRPPPTPNAEAPPPGPGQASSVAPSSTNVESSAEGAPPPGPAP-PPATSHPRVIRISHQS 444
T PPP+ +A P PGPG P PGP P PP S P +
Sbjct: 219 TLPPPSVSATGPGPGPGPG-----------------PGPGPGPAPPNYSRPHGM------ 255
Query: 445 VEPVVMMHMNIQDSGTQPGGVPSAPTGPLGPPGHGQTLGQQVPGFPTAPTRVVIARPTPP 504
GG P GP G P PG P P
Sbjct: 256 ------------------GGPNMPPPGPSGVP----------PGMPGQP----------- 276
Query: 505 QARPSHPGGPPV---SGTLQGAGLGTNASLAQMVSGLVGQLLMQPVLVAQGTPGMAPPPA 561
PGGPP G + A T+ Q L+ P G P APP
Sbjct: 277 ------PGGPPKPWPEGPMANAAAPTSTP----------QKLIPPQ--PTGRPSPAPPAV 318
Query: 562 PATASASAGTTNTATTAGPAPGGPAQPPP 590
P AS +PG PAQP P
Sbjct: 319 PPAASP------VMPPQTQSPGQPAQPAP 341
Score = 40.4 bits (93), Expect = 0.010
Identities = 84/350 (24%), Positives = 116/350 (33%), Gaps = 58/350 (16%)
Query: 188 GPQP--QHSQPPPQP-PAVTPEPVALSSQTSEPVESEAPPREPMEAEEVEERAPAQNPEL 244
GP P HS P P P P+ P ++ +PME+ + E+ + +P
Sbjct: 33 GPSPGSAHSMMGPSPGPPSAGHPIPTQGPGGYPQDNMHQMHKPMES--MHEKGMSDDPRY 90
Query: 245 TP---------GPAPAGPTPAP-ETNAPNHPSPAEYVEVLQELQRLESRLQPFLQRYYEV 294
G A GP P+P + ++ +PSP L E P
Sbjct: 91 NQMKGMGMRSGGHAGMGPPPSPMDQHSQGYPSP---------LGGSEHASSPV-----PA 136
Query: 295 LGAAATTDYNNNHEGREEDQRLINLVGESLRLLGNTFV---ALSDLRCNLACTP------ 345
G ++ ++ G D +G+ R G T L LR +
Sbjct: 137 SGPSSGPQMSSGPGGAPLDGADPQALGQQNR--GPTPFNQNQLHQLRAQIMAYKMLARGQ 194
Query: 346 --PRHLHVV----RPMSHYTTPMVLQQAAIPIQINVGTTVTMTGNGTRPPPTPNAEAP-- 397
P HL + RPM P + QQ +V T G G P P P P
Sbjct: 195 PLPDHLQMAVQGKRPM-----PGMQQQMPTLPPPSVSATGPGPGPGPGPGPGPGPAPPNY 249
Query: 398 --PPGPGQASSVAPSSTNVESSAEGAPPPGPAPPPATSHPRVIRISHQSVEPVVMMHMNI 455
P G G + P + V G PP GP P P P + S ++
Sbjct: 250 SRPHGMGGPNMPPPGPSGVPPGMPGQPPGGP-PKPWPEGPMANAAAPTSTPQKLIPPQPT 308
Query: 456 QDSGTQPGGVPSAPTGPLGPPGHGQTLGQQVPGFPTAPTRVVIARPTPPQ 505
P VP A P+ PP Q+ GQ P P +R TP Q
Sbjct: 309 GRPSPAPPAVPPA-ASPVMPP-QTQSPGQPAQPAPMVPLHQKQSRITPIQ 356
Score = 36.6 bits (83), Expect = 0.14
Identities = 39/128 (30%), Positives = 55/128 (42%), Gaps = 16/128 (12%)
Query: 187 GGPQPQHSQPPPQPPAVTPE-PVA-LSSQTSEPVE----------SEAPPREPMEAEEVE 234
G P QPP PP PE P+A ++ TS P + S APP P A V
Sbjct: 267 GVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPAASPVM 326
Query: 235 ERAPAQNPELTPGPAPAGPTPAPETNAP--NHPSPAEYVEVLQELQ-RLESRLQPFLQRY 291
Q+P PAP P ++ P + VE+LQE + RL++R+ +Q
Sbjct: 327 P-PQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRGLDPVEILQEREYRLQARIAHRIQEL 385
Query: 292 YEVLGAAA 299
+ G+ A
Sbjct: 386 ENLPGSLA 393
Score = 35.8 bits (81), Expect = 0.23
Identities = 67/282 (23%), Positives = 85/282 (30%), Gaps = 69/282 (24%)
Query: 420 GAPPPGPAPPPATSHPRVIRISHQSVEPVVMMHMNIQDSGTQPGGVPSAPTGPLGPPGHG 479
G P PGP+P P S ++ S G PG S GPP G
Sbjct: 10 GTPRPGPSPGPGPSPGAMLGPS----------------PGPSPGSAHSMMGPSPGPPSAG 53
Query: 480 QTLGQQVPGFPTAPTRVVIARPTPPQARPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLV 539
+ Q PG + +P P + Q G+G M SG
Sbjct: 54 HPIPTQGPGGYPQDNMHQMHKPMESMHEKGMSDDPRYN---QMKGMG-------MRSG-- 101
Query: 540 GQLLMQPVLVAQGTPGMAPPPAPATASASAGTTNTATTAGPAPGGPAQ----PPPTPQPS 595
G GM PPP+P + P+P G ++ P P PS
Sbjct: 102 ------------GHAGMGPPPSPMDQHSQGY---------PSPLGGSEHASSPVPASGPS 140
Query: 596 MADLQFSQLLGNLLGPAGPGAGGSGVASPT-----------ITVAMPGVPAFLQGMTDFL 644
S G L A P A G PT + + A Q + D L
Sbjct: 141 SGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQLRAQIMAYKMLARGQPLPDHL 200
Query: 645 QATQTAPPPPPPPPPPPPAPEQQTMPPPGSPSGGAGSPGGLG 686
Q P P P T+PPP + G G G G
Sbjct: 201 QMAVQGKRPMPGMQQQMP-----TLPPPSVSATGPGPGPGPG 237
Score = 33.5 bits (75), Expect = 1.2
Identities = 52/222 (23%), Positives = 72/222 (32%), Gaps = 74/222 (33%)
Query: 498 IARPTPPQARPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLVGQLLMQPVLVAQGTPGMA 557
++ P PP PG P G GA LG
Sbjct: 1 MSTPDPPLGGTPRPGPSPGPGPSPGAMLG------------------------------- 29
Query: 558 PPPAPATASASAGTTNTATTAGPAPGGPA--QPPPT------PQPSM------------- 596
P P P+ SA + GP+PG P+ P PT PQ +M
Sbjct: 30 PSPGPSPGSAH-------SMMGPSPGPPSAGHPIPTQGPGGYPQDNMHQMHKPMESMHEK 82
Query: 597 ---ADLQFSQLLGNLLGPAGPGAGGSGVASPTITVAMPGVPAFLQGMTDFLQATQTAPPP 653
D +++Q+ G +G G G G + G P+ L G +
Sbjct: 83 GMSDDPRYNQMKG--MGMRSGGHAGMGPPPSPMDQHSQGYPSPLGG---------SEHAS 131
Query: 654 PPPPPPPPPAPEQQTMPPPGSPSGGAGSPGGLGLESLSPEFF 695
P P P + Q + P G+P GA P LG ++ P F
Sbjct: 132 SPVPASGPSSGPQMSSGPGGAPLDGA-DPQALGQQNRGPTPF 172
Score = 32.0 bits (71), Expect = 3.4
Identities = 47/176 (26%), Positives = 65/176 (36%), Gaps = 15/176 (8%)
Query: 942 QPLPEE-PMEVQGAERASPEPQREN--------ASPAPGTTAEEAMSRGPPPAPEGGSRD 992
QPLP+ M VQG +R P Q++ ++ PG GP PAP SR
Sbjct: 194 QPLPDHLQMAVQG-KRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGPGPGPAPPNYSRP 252
Query: 993 EQDGASAETEPWAAAVPPEWVPIIQQDIQSQRKVKPQPPLSDAYLSGMPAKRRKTMQGEG 1052
G P + VPP + Q K P+ P+++A ++ Q G
Sbjct: 253 HGMGGPNMPPPGPSGVPP---GMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTG 309
Query: 1053 PQLLLSEAVSRAAKAAGARPLTSPESLSRDLEAPEVQESYRQQLRSDIQKRLQEDP 1108
AV AA SP ++ AP V +Q + IQK DP
Sbjct: 310 RPSPAPPAVPPAASPVMPPQTQSPGQPAQ--PAPMVPLHQKQSRITPIQKPRGLDP 363
Score = 31.6 bits (70), Expect = 4.4
Identities = 26/99 (26%), Positives = 35/99 (35%), Gaps = 15/99 (15%)
Query: 171 HMIRDIQTLLSRMECRGGPQPQHSQPPPQPPAVTPEPVALSSQTSEPVESEAPPREPMEA 230
H +R Q + +M RG P P H Q +A+ + P + P P +
Sbjct: 178 HQLR-AQIMAYKMLARGQPLPDHLQ------------MAVQGKRPMPGMQQQMPTLPPPS 224
Query: 231 EEVEERAPAQNPELTPGPAPAGPTPAPE--TNAPNHPSP 267
P P PGP PA P + PN P P
Sbjct: 225 VSATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPP 263
Score = 31.2 bits (69), Expect = 5.8
Identities = 27/99 (27%), Positives = 38/99 (38%), Gaps = 21/99 (21%)
Query: 938 GDPPQPLPEEPMEVQGAERASPE---PQRENASPAPGTTAEEAMSRGPPPAPEGGSRDEQ 994
G PP+P PE PM A ++P+ P + P+P PP P S
Sbjct: 278 GGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSP----------APPAVPPAASPVMP 327
Query: 995 DGASAETEPWAAAVPPEWVPIIQQD-----IQSQRKVKP 1028
+ +P A P VP+ Q+ IQ R + P
Sbjct: 328 PQTQSPGQP---AQPAPMVPLHQKQSRITPIQKPRGLDP 363
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.131 0.389
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,288,515
Number of Sequences: 37866
Number of extensions: 4500348
Number of successful extensions: 104723
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1153
Number of HSP's successfully gapped in prelim test: 1983
Number of HSP's that attempted gapping in prelim test: 31158
Number of HSP's gapped (non-prelim): 39737
length of query: 1126
length of database: 18,247,518
effective HSP length: 113
effective length of query: 1013
effective length of database: 13,968,660
effective search space: 14150252580
effective search space used: 14150252580
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.