Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 18152769
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|18152769 EDAR-associated death domain isoform B [Homo
sapiens]
(205 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|18152769 EDAR-associated death domain isoform B [Homo sapiens] 437 e-123
gi|153267418 EDAR-associated death domain isoform A [Homo sapiens] 417 e-117
gi|7019561 thyrotropin-releasing hormone degrading enzyme [Homo ... 34 0.076
gi|12383051 transmembrane protein with EGF-like and two follista... 32 0.49
gi|7706091 bifunctional apoptosis regulator [Homo sapiens] 31 0.64
gi|169173140 PREDICTED: hypothetical protein LOC100131112 [Homo ... 31 0.84
gi|74271832 G protein-coupled receptor 155 isoform 9 [Homo sapiens] 31 0.84
gi|74271834 G protein-coupled receptor 155 isoform 10 [Homo sapi... 31 0.84
gi|157266273 RANBP2-like and GRIP domain containing 1 [Homo sapi... 30 1.1
gi|118200331 RANBP2-like and GRIP domain containing 2 [Homo sapi... 30 1.1
gi|27734865 unc-5 homolog C-like [Homo sapiens] 30 1.9
gi|226497734 RNA binding motif protein 19 [Homo sapiens] 29 2.4
gi|226497654 RNA binding motif protein 19 [Homo sapiens] 29 2.4
gi|226497574 RNA binding motif protein 19 [Homo sapiens] 29 2.4
gi|126090892 aggrecan isoform 2 precursor [Homo sapiens] 29 2.4
gi|126090883 aggrecan isoform 1 precursor [Homo sapiens] 29 2.4
gi|150456444 hypothetical protein LOC57578 [Homo sapiens] 28 5.5
gi|119874201 furry-like [Homo sapiens] 28 7.1
gi|18375673 regulator of nonsense transcripts 1 [Homo sapiens] 28 7.1
gi|24308169 dynein, axonemal, heavy chain 3 [Homo sapiens] 28 7.1
gi|222080100 BAI1-associated protein 2 isoform 4 [Homo sapiens] 27 9.3
gi|5453565 BAI1-associated protein 2 isoform 3 [Homo sapiens] 27 9.3
gi|9257197 BAI1-associated protein 2 isoform 1 [Homo sapiens] 27 9.3
gi|9257199 BAI1-associated protein 2 isoform 2 [Homo sapiens] 27 9.3
gi|93141003 testican 3 isoform 1 [Homo sapiens] 27 9.3
gi|93141001 testican 3 isoform 2 [Homo sapiens] 27 9.3
gi|32313593 olfactomedin 4 precursor [Homo sapiens] 27 9.3
gi|33300663 polycomb group ring finger 5 [Homo sapiens] 27 9.3
gi|66346704 NMDA receptor regulated 2 isoform b [Homo sapiens] 27 9.3
gi|37202123 NMDA receptor regulated 2 isoform a [Homo sapiens] 27 9.3
>gi|18152769 EDAR-associated death domain isoform B [Homo sapiens]
Length = 205
Score = 437 bits (1124), Expect = e-123
Identities = 205/205 (100%), Positives = 205/205 (100%)
Query: 1 MASPDDPLRADHMVKEPVEDTDPSTLSFNMSDKYPIQDTELPKAEECDTITLNCPRNSDM 60
MASPDDPLRADHMVKEPVEDTDPSTLSFNMSDKYPIQDTELPKAEECDTITLNCPRNSDM
Sbjct: 1 MASPDDPLRADHMVKEPVEDTDPSTLSFNMSDKYPIQDTELPKAEECDTITLNCPRNSDM 60
Query: 61 KNQGEENGFPDSTGDPLPEISKDNSCKENCTCSSCLLRAPTISDLLNDQDLLDVIRIKLD 120
KNQGEENGFPDSTGDPLPEISKDNSCKENCTCSSCLLRAPTISDLLNDQDLLDVIRIKLD
Sbjct: 61 KNQGEENGFPDSTGDPLPEISKDNSCKENCTCSSCLLRAPTISDLLNDQDLLDVIRIKLD 120
Query: 121 PCHPTVKNWRNFASKWGMSYDELCFLEQRPQSPTLEFLLRNSQRTVGQLMELCRLYHRAD 180
PCHPTVKNWRNFASKWGMSYDELCFLEQRPQSPTLEFLLRNSQRTVGQLMELCRLYHRAD
Sbjct: 121 PCHPTVKNWRNFASKWGMSYDELCFLEQRPQSPTLEFLLRNSQRTVGQLMELCRLYHRAD 180
Query: 181 VEKVLRRWVDEEWPKRERGDPSRHF 205
VEKVLRRWVDEEWPKRERGDPSRHF
Sbjct: 181 VEKVLRRWVDEEWPKRERGDPSRHF 205
>gi|153267418 EDAR-associated death domain isoform A [Homo sapiens]
Length = 215
Score = 417 bits (1072), Expect = e-117
Identities = 195/195 (100%), Positives = 195/195 (100%)
Query: 11 DHMVKEPVEDTDPSTLSFNMSDKYPIQDTELPKAEECDTITLNCPRNSDMKNQGEENGFP 70
DHMVKEPVEDTDPSTLSFNMSDKYPIQDTELPKAEECDTITLNCPRNSDMKNQGEENGFP
Sbjct: 21 DHMVKEPVEDTDPSTLSFNMSDKYPIQDTELPKAEECDTITLNCPRNSDMKNQGEENGFP 80
Query: 71 DSTGDPLPEISKDNSCKENCTCSSCLLRAPTISDLLNDQDLLDVIRIKLDPCHPTVKNWR 130
DSTGDPLPEISKDNSCKENCTCSSCLLRAPTISDLLNDQDLLDVIRIKLDPCHPTVKNWR
Sbjct: 81 DSTGDPLPEISKDNSCKENCTCSSCLLRAPTISDLLNDQDLLDVIRIKLDPCHPTVKNWR 140
Query: 131 NFASKWGMSYDELCFLEQRPQSPTLEFLLRNSQRTVGQLMELCRLYHRADVEKVLRRWVD 190
NFASKWGMSYDELCFLEQRPQSPTLEFLLRNSQRTVGQLMELCRLYHRADVEKVLRRWVD
Sbjct: 141 NFASKWGMSYDELCFLEQRPQSPTLEFLLRNSQRTVGQLMELCRLYHRADVEKVLRRWVD 200
Query: 191 EEWPKRERGDPSRHF 205
EEWPKRERGDPSRHF
Sbjct: 201 EEWPKRERGDPSRHF 215
>gi|7019561 thyrotropin-releasing hormone degrading enzyme [Homo
sapiens]
Length = 1024
Score = 34.3 bits (77), Expect = 0.076
Identities = 27/91 (29%), Positives = 39/91 (42%), Gaps = 8/91 (8%)
Query: 85 SCKENCTCSSCLLRAPTISDLLNDQDLLDVIRIKLDPCHPTVKNWRNFASKW---GMSYD 141
+C ++ + LL S+++ DQD +DVI H W+ F KW Y
Sbjct: 893 TCSDDRNLLNRLLNLSLNSEVVLDQDAIDVIIHVARNPHGRDLAWKFFRDKWKILNTRYG 952
Query: 142 ELCFLEQRPQSPTLEFLLRNSQRTVGQLMEL 172
E F+ + S EFL T G+L EL
Sbjct: 953 EALFMNSKLISGVTEFL-----NTEGELKEL 978
>gi|12383051 transmembrane protein with EGF-like and two
follistatin-like domains 2 [Homo sapiens]
Length = 374
Score = 31.6 bits (70), Expect = 0.49
Identities = 29/106 (27%), Positives = 44/106 (41%), Gaps = 11/106 (10%)
Query: 46 ECDTITLNCPRNSDMKNQGEENGFPDS---TGDPLPEISKDNSCKENCTCSSCLLRAPTI 102
EC C + S++ E + D+ +GD + E S + S KE TC C A
Sbjct: 113 ECYLRQAACKQQSEILVVSEGSCATDAGSGSGDGVHEGSGETSQKETSTCDICQFGAEC- 171
Query: 103 SDLLNDQDLLDVIRIKLDPCHPTVKNWRNFASKWGMSYDELCFLEQ 148
D+D DV + C T N+ + G SYD C +++
Sbjct: 172 -----DEDAEDVWCVCNIDCSQT--NFNPLCASDGKSYDNACQIKE 210
>gi|7706091 bifunctional apoptosis regulator [Homo sapiens]
Length = 450
Score = 31.2 bits (69), Expect = 0.64
Identities = 28/104 (26%), Positives = 45/104 (43%), Gaps = 5/104 (4%)
Query: 101 TISDLLNDQDLLDVIRIKLDPCHPTVKNWRNFASKWG-MSYD---ELCFLEQRPQSPTLE 156
TI L D D++ LD PT K WR F K+ + Y E + T
Sbjct: 301 TICPLQEDSSGEDIVTKLLDLKEPTWKQWREFLVKYSFLPYQLIAEFAWDWLEVHYWTSR 360
Query: 157 FLLRNSQ-RTVGQLMELCRLYHRADVEKVLRRWVDEEWPKRERG 199
FL+ N+ +V +L R++ R++++ V +R W +G
Sbjct: 361 FLIINAMLLSVLELFSFWRIWSRSELKTVPQRMWSHFWKVSTQG 404
>gi|169173140 PREDICTED: hypothetical protein LOC100131112 [Homo
sapiens]
Length = 160
Score = 30.8 bits (68), Expect = 0.84
Identities = 25/79 (31%), Positives = 33/79 (41%), Gaps = 7/79 (8%)
Query: 40 ELPKAEECDTITLNCPRNSDMKNQGEENGFPDSTGD-PLPEISKDNSCKENCTCSSCLLR 98
+LP E C I+ M+ E FP T D L EI K+ K + L
Sbjct: 54 QLPSNEGCKQISWQAVSRPQMEFYSEAQMFPYRTQDVSLKEIMKEEGIKWS------LWT 107
Query: 99 APTISDLLNDQDLLDVIRI 117
AP +S L N Q V+R+
Sbjct: 108 APGLSGLQNKQQDCSVVRV 126
>gi|74271832 G protein-coupled receptor 155 isoform 9 [Homo sapiens]
Length = 870
Score = 30.8 bits (68), Expect = 0.84
Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 3/78 (3%)
Query: 22 DPSTLSFNMSDKYPIQDTELPKAEECDTITLNCPR-NSDMKNQGEENGFPDSTGDP-LPE 79
+P +F S P+ + EL + +T +C N ++ E ST +P +P
Sbjct: 564 EPGNTAFEESPA-PVNEPELFTSSIPETSCCSCSMGNGELHCPSIEPIANTSTSEPVIPS 622
Query: 80 ISKDNSCKENCTCSSCLL 97
K+N C C SC+L
Sbjct: 623 FEKNNHCVSRCNSQSCIL 640
>gi|74271834 G protein-coupled receptor 155 isoform 10 [Homo
sapiens]
Length = 870
Score = 30.8 bits (68), Expect = 0.84
Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 3/78 (3%)
Query: 22 DPSTLSFNMSDKYPIQDTELPKAEECDTITLNCPR-NSDMKNQGEENGFPDSTGDP-LPE 79
+P +F S P+ + EL + +T +C N ++ E ST +P +P
Sbjct: 564 EPGNTAFEESPA-PVNEPELFTSSIPETSCCSCSMGNGELHCPSIEPIANTSTSEPVIPS 622
Query: 80 ISKDNSCKENCTCSSCLL 97
K+N C C SC+L
Sbjct: 623 FEKNNHCVSRCNSQSCIL 640
>gi|157266273 RANBP2-like and GRIP domain containing 1 [Homo sapiens]
Length = 1756
Score = 30.4 bits (67), Expect = 1.1
Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Query: 5 DDPLRADHMVKEPVEDTDPSTLSFNMSDKYPIQDTELPKAEECDTITLNCPRNSDMKNQG 64
D PL A V++ + D ST FN S K + ++ P ++ SD+ +
Sbjct: 1262 DSPL-ASSPVRKNIFRFDESTTGFNFSFKSALSLSKSPAKLNQSGTSVGTDEESDVTQEE 1320
Query: 65 EENGFPDSTGDPLPEISKDNSCKEN 89
E +G PLP++ + +S +EN
Sbjct: 1321 ERDGQYFEPVVPLPDLVEVSSGEEN 1345
>gi|118200331 RANBP2-like and GRIP domain containing 2 [Homo
sapiens]
Length = 1013
Score = 30.4 bits (67), Expect = 1.1
Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Query: 5 DDPLRADHMVKEPVEDTDPSTLSFNMSDKYPIQDTELPKAEECDTITLNCPRNSDMKNQG 64
D PL A V++ + D ST FN S K + ++ P ++ SD+ +
Sbjct: 519 DSPL-ASSPVRKNIFRFDESTTGFNFSFKSALSLSKSPAKLNQSGTSVGTDEESDVTQEE 577
Query: 65 EENGFPDSTGDPLPEISKDNSCKEN 89
E +G PLP++ + +S +EN
Sbjct: 578 ERDGQYFEPVVPLPDLVEVSSGEEN 602
>gi|27734865 unc-5 homolog C-like [Homo sapiens]
Length = 518
Score = 29.6 bits (65), Expect = 1.9
Identities = 19/81 (23%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 110 DLLDVIRIKLDPCHPTVKNWRNFASKWGMSYDELCFLE-QRPQSPTLEFLLRNSQRTVGQ 168
+L + +R+ L+P T +WR AS G+ ++ FL QR + + L ++ +
Sbjct: 411 ELFEQLRMLLEPNSITGNDWRGLASHLGLCGMKIRFLSCQRSPAAAILELFEEQNGSLQE 470
Query: 169 LMELCRLYHRADVEKVLRRWV 189
L L + R D ++ ++
Sbjct: 471 LHYLMTVMERLDCASAIQNYL 491
>gi|226497734 RNA binding motif protein 19 [Homo sapiens]
Length = 960
Score = 29.3 bits (64), Expect = 2.4
Identities = 24/91 (26%), Positives = 37/91 (40%), Gaps = 3/91 (3%)
Query: 11 DHMVKEPVEDTDPSTLSFNMSDKYPIQDTELPKAEECDTITLNCPRNSDMKNQGEENGFP 70
D++ + V+ S+ S+ + E +AEE D+ + D K G+E G P
Sbjct: 209 DYLKSKMVKAGSSSSSEEEESEDEAVHCDEGSEAEEEDSSATPVLQERDSKGAGQEQGMP 268
Query: 71 DSTGDP---LPEISKDNSCKENCTCSSCLLR 98
P E K + KE TC + LR
Sbjct: 269 AGKKRPPEARAETEKPANQKEPTTCHTVKLR 299
>gi|226497654 RNA binding motif protein 19 [Homo sapiens]
Length = 960
Score = 29.3 bits (64), Expect = 2.4
Identities = 24/91 (26%), Positives = 37/91 (40%), Gaps = 3/91 (3%)
Query: 11 DHMVKEPVEDTDPSTLSFNMSDKYPIQDTELPKAEECDTITLNCPRNSDMKNQGEENGFP 70
D++ + V+ S+ S+ + E +AEE D+ + D K G+E G P
Sbjct: 209 DYLKSKMVKAGSSSSSEEEESEDEAVHCDEGSEAEEEDSSATPVLQERDSKGAGQEQGMP 268
Query: 71 DSTGDP---LPEISKDNSCKENCTCSSCLLR 98
P E K + KE TC + LR
Sbjct: 269 AGKKRPPEARAETEKPANQKEPTTCHTVKLR 299
>gi|226497574 RNA binding motif protein 19 [Homo sapiens]
Length = 960
Score = 29.3 bits (64), Expect = 2.4
Identities = 24/91 (26%), Positives = 37/91 (40%), Gaps = 3/91 (3%)
Query: 11 DHMVKEPVEDTDPSTLSFNMSDKYPIQDTELPKAEECDTITLNCPRNSDMKNQGEENGFP 70
D++ + V+ S+ S+ + E +AEE D+ + D K G+E G P
Sbjct: 209 DYLKSKMVKAGSSSSSEEEESEDEAVHCDEGSEAEEEDSSATPVLQERDSKGAGQEQGMP 268
Query: 71 DSTGDP---LPEISKDNSCKENCTCSSCLLR 98
P E K + KE TC + LR
Sbjct: 269 AGKKRPPEARAETEKPANQKEPTTCHTVKLR 299
>gi|126090892 aggrecan isoform 2 precursor [Homo sapiens]
Length = 2416
Score = 29.3 bits (64), Expect = 2.4
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 10/69 (14%)
Query: 17 PVEDTDPSTLSFNMSDKYPIQD---------TELPKA-EECDTITLNCPRNSDMKNQGEE 66
P E+ PS F + +P ++ +E P A EE T + P +++ + GEE
Sbjct: 801 PSEEPFPSVRPFPSVELFPSEEPFPSKEPSPSEEPSASEEPYTPSPPVPSWTELPSSGEE 860
Query: 67 NGFPDSTGD 75
+G PD +GD
Sbjct: 861 SGAPDVSGD 869
>gi|126090883 aggrecan isoform 1 precursor [Homo sapiens]
Length = 2317
Score = 29.3 bits (64), Expect = 2.4
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 10/69 (14%)
Query: 17 PVEDTDPSTLSFNMSDKYPIQD---------TELPKA-EECDTITLNCPRNSDMKNQGEE 66
P E+ PS F + +P ++ +E P A EE T + P +++ + GEE
Sbjct: 801 PSEEPFPSVRPFPSVELFPSEEPFPSKEPSPSEEPSASEEPYTPSPPVPSWTELPSSGEE 860
Query: 67 NGFPDSTGD 75
+G PD +GD
Sbjct: 861 SGAPDVSGD 869
>gi|150456444 hypothetical protein LOC57578 [Homo sapiens]
Length = 2458
Score = 28.1 bits (61), Expect = 5.5
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 150 PQSPTLEFLLRNSQRTVGQLMELCRLYHRA 179
P S L F+++N+ T+ L+ELC L +RA
Sbjct: 2042 PFSKLLSFVIQNAVFTLAYLVELCGLCYRA 2071
>gi|119874201 furry-like [Homo sapiens]
Length = 3013
Score = 27.7 bits (60), Expect = 7.1
Identities = 26/82 (31%), Positives = 31/82 (37%), Gaps = 22/82 (26%)
Query: 62 NQGEENGFPDSTG------DPLPEISKDNSCKENCTCSSCLLRAPTISDLLNDQD----- 110
NQGE FP + G D +PE S C + LL +DL+ D
Sbjct: 1562 NQGEPLPFPPAGGCWSPLVDYVPETSSPGLPLHRCNIAVILL-----TDLIIDHSVKVEW 1616
Query: 111 ------LLDVIRIKLDPCHPTV 126
LL I I D CHP V
Sbjct: 1617 GSYLHLLLHAIFIGFDHCHPEV 1638
>gi|18375673 regulator of nonsense transcripts 1 [Homo sapiens]
Length = 1118
Score = 27.7 bits (60), Expect = 7.1
Identities = 29/111 (26%), Positives = 49/111 (44%), Gaps = 14/111 (12%)
Query: 89 NCTCSSCLLRA--PTISDLLNDQDLLDVIRIKLDPC--HPTVKNWRNFASKWGMSYDELC 144
NC C + L P +D + V+ + PC ++K+ +S+W + C
Sbjct: 185 NCGCRNVFLLGFIPAKADSV-------VVLLCRQPCASQSSLKDINWDSSQWQPLIQDRC 237
Query: 145 FLEQRPQSPTLEFLLRNSQRTVGQLMELCRLYHR---ADVEKVLRRWVDEE 192
FL + P+ + LR Q T Q+ +L L+ A +E + + VDEE
Sbjct: 238 FLSWLVKIPSEQEQLRARQITAQQINKLEELWKENPSATLEDLEKPGVDEE 288
>gi|24308169 dynein, axonemal, heavy chain 3 [Homo sapiens]
Length = 4116
Score = 27.7 bits (60), Expect = 7.1
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Query: 150 PQSPTLEFLLRNSQRTVGQLMELCRLYHRADVEKVLRRWVDE 191
P F LR+ R + ++ LC H DVEK +R W+ E
Sbjct: 2266 PSKSHYVFNLRDFSRVIQGVL-LCPHTHLQDVEKCIRLWIHE 2306
>gi|222080100 BAI1-associated protein 2 isoform 4 [Homo sapiens]
Length = 534
Score = 27.3 bits (59), Expect = 9.3
Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
Query: 10 ADHMVKEPVEDTDP---STLSFNMSDKYPIQDTELPKAEECDTITLNCPRNSDMKNQGEE 66
AD +P + P S LS + S+ P++ + PK T PR+S M E
Sbjct: 314 ADRKAAQPKSLSPPQSQSKLSDSYSNTLPVRKSVTPKNSYATTENKTLPRSSSMAAGLER 373
Query: 67 NG 68
NG
Sbjct: 374 NG 375
>gi|5453565 BAI1-associated protein 2 isoform 3 [Homo sapiens]
Length = 520
Score = 27.3 bits (59), Expect = 9.3
Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
Query: 10 ADHMVKEPVEDTDP---STLSFNMSDKYPIQDTELPKAEECDTITLNCPRNSDMKNQGEE 66
AD +P + P S LS + S+ P++ + PK T PR+S M E
Sbjct: 314 ADRKAAQPKSLSPPQSQSKLSDSYSNTLPVRKSVTPKNSYATTENKTLPRSSSMAAGLER 373
Query: 67 NG 68
NG
Sbjct: 374 NG 375
>gi|9257197 BAI1-associated protein 2 isoform 1 [Homo sapiens]
Length = 521
Score = 27.3 bits (59), Expect = 9.3
Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
Query: 10 ADHMVKEPVEDTDP---STLSFNMSDKYPIQDTELPKAEECDTITLNCPRNSDMKNQGEE 66
AD +P + P S LS + S+ P++ + PK T PR+S M E
Sbjct: 314 ADRKAAQPKSLSPPQSQSKLSDSYSNTLPVRKSVTPKNSYATTENKTLPRSSSMAAGLER 373
Query: 67 NG 68
NG
Sbjct: 374 NG 375
>gi|9257199 BAI1-associated protein 2 isoform 2 [Homo sapiens]
Length = 552
Score = 27.3 bits (59), Expect = 9.3
Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
Query: 10 ADHMVKEPVEDTDP---STLSFNMSDKYPIQDTELPKAEECDTITLNCPRNSDMKNQGEE 66
AD +P + P S LS + S+ P++ + PK T PR+S M E
Sbjct: 314 ADRKAAQPKSLSPPQSQSKLSDSYSNTLPVRKSVTPKNSYATTENKTLPRSSSMAAGLER 373
Query: 67 NG 68
NG
Sbjct: 374 NG 375
>gi|93141003 testican 3 isoform 1 [Homo sapiens]
Length = 433
Score = 27.3 bits (59), Expect = 9.3
Identities = 26/83 (31%), Positives = 36/83 (43%), Gaps = 7/83 (8%)
Query: 98 RAPTISDLLNDQDLLDVIRI-KLDPCHPTVKNWRNFASKWGMSYDELCFLEQRPQSPTLE 156
R T DLL DQ L I + K + C N + +S +E C+ QR Q P +
Sbjct: 256 RLDTNYDLLLDQSELRSIYLDKNEQCTKAFFNSCDTYKDSLISNNEWCYCFQRQQDPPCQ 315
Query: 157 FLLRNSQ------RTVGQLMELC 173
L N Q + +GQ + LC
Sbjct: 316 TELSNIQKRQGVKKLLGQYIPLC 338
>gi|93141001 testican 3 isoform 2 [Homo sapiens]
Length = 436
Score = 27.3 bits (59), Expect = 9.3
Identities = 26/83 (31%), Positives = 36/83 (43%), Gaps = 7/83 (8%)
Query: 98 RAPTISDLLNDQDLLDVIRI-KLDPCHPTVKNWRNFASKWGMSYDELCFLEQRPQSPTLE 156
R T DLL DQ L I + K + C N + +S +E C+ QR Q P +
Sbjct: 259 RLDTNYDLLLDQSELRSIYLDKNEQCTKAFFNSCDTYKDSLISNNEWCYCFQRQQDPPCQ 318
Query: 157 FLLRNSQ------RTVGQLMELC 173
L N Q + +GQ + LC
Sbjct: 319 TELSNIQKRQGVKKLLGQYIPLC 341
>gi|32313593 olfactomedin 4 precursor [Homo sapiens]
Length = 510
Score = 27.3 bits (59), Expect = 9.3
Identities = 18/56 (32%), Positives = 22/56 (39%), Gaps = 11/56 (19%)
Query: 128 NWRNFA---SKWGMSYDELCFLEQRPQSPTLEFLLRNSQRTVGQLMELCRLYHRAD 180
NWR F+ WG Y PQ P T G+L+E RLY+ D
Sbjct: 263 NWRGFSYLYGAWGRDYS--------PQHPNKGLYWVAPLNTDGRLLEYYRLYNTLD 310
>gi|33300663 polycomb group ring finger 5 [Homo sapiens]
Length = 256
Score = 27.3 bits (59), Expect = 9.3
Identities = 28/121 (23%), Positives = 46/121 (38%), Gaps = 13/121 (10%)
Query: 61 KNQGEENGFPDSTGDPLPEISKDNSCKEN-----------CTCSSCLLRAPTISDLLNDQ 109
KN+ +ENG D++ P++ ++ E+ C CL D +
Sbjct: 100 KNKPQENGQDDTSKADKPKVDEEGDENEDDKDYHRSDPQIAICLDCLRNNGQSGDNVVKG 159
Query: 110 DLLDVIRIKLDPCHPTVKNWRNFASKWGMSY--DELCFLEQRPQSPTLEFLLRNSQRTVG 167
+ IR T+K + + K SY D LC E + T+EF+ R G
Sbjct: 160 LMKKFIRCSTRVTVGTIKKFLSLKLKLPSSYELDVLCNGEIMGKDHTMEFIYMTRWRLRG 219
Query: 168 Q 168
+
Sbjct: 220 E 220
>gi|66346704 NMDA receptor regulated 2 isoform b [Homo sapiens]
Length = 845
Score = 27.3 bits (59), Expect = 9.3
Identities = 29/102 (28%), Positives = 39/102 (38%), Gaps = 7/102 (6%)
Query: 6 DPLRADHMVKEPVEDTDPSTLSFNMSDKYPIQDTELPKA---EECDTITLNCPRNSDMKN 62
D L AD +E+ D S S+ +DT L + EEC I C NSD K
Sbjct: 396 DILHADGERPNVLENLDNSKEKTVGSEAAKTEDTVLCSSDTDEECLIIDTECKNNSDGKT 455
Query: 63 Q---GEENGFPDSTGDPLPEISKDNSCKENCTC-SSCLLRAP 100
+ P S + S N C+ SC+L+ P
Sbjct: 456 AVVGSNLSSRPASPNSSSGQASVGNQTNTACSPEESCVLKKP 497
>gi|37202123 NMDA receptor regulated 2 isoform a [Homo sapiens]
Length = 982
Score = 27.3 bits (59), Expect = 9.3
Identities = 29/102 (28%), Positives = 39/102 (38%), Gaps = 7/102 (6%)
Query: 6 DPLRADHMVKEPVEDTDPSTLSFNMSDKYPIQDTELPKA---EECDTITLNCPRNSDMKN 62
D L AD +E+ D S S+ +DT L + EEC I C NSD K
Sbjct: 533 DILHADGERPNVLENLDNSKEKTVGSEAAKTEDTVLCSSDTDEECLIIDTECKNNSDGKT 592
Query: 63 Q---GEENGFPDSTGDPLPEISKDNSCKENCTC-SSCLLRAP 100
+ P S + S N C+ SC+L+ P
Sbjct: 593 AVVGSNLSSRPASPNSSSGQASVGNQTNTACSPEESCVLKKP 634
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.134 0.424
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,379,171
Number of Sequences: 37866
Number of extensions: 439151
Number of successful extensions: 1105
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 1095
Number of HSP's gapped (non-prelim): 36
length of query: 205
length of database: 18,247,518
effective HSP length: 97
effective length of query: 108
effective length of database: 14,574,516
effective search space: 1574047728
effective search space used: 1574047728
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.