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Search of human proteins with 18104959
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|18104959 thioredoxin domain containing 9 [Homo sapiens]
(226 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|18104959 thioredoxin domain containing 9 [Homo sapiens] 457 e-129
gi|51944950 phosducin-like 2 [Homo sapiens] 73 2e-13
gi|13129044 phosducin-like 3 [Homo sapiens] 58 8e-09
gi|4505257 moesin [Homo sapiens] 40 0.002
gi|32967591 phosducin isoform a [Homo sapiens] 38 0.006
gi|12408668 phosducin isoform b [Homo sapiens] 38 0.006
gi|95113651 glutaredoxin 3 [Homo sapiens] 37 0.011
gi|21361403 thioredoxin 2 precursor [Homo sapiens] 37 0.011
gi|32698688 citron [Homo sapiens] 35 0.040
gi|110611228 utrophin [Homo sapiens] 35 0.068
gi|4506467 radixin [Homo sapiens] 34 0.089
gi|70980531 GGA binding partner [Homo sapiens] 34 0.089
gi|38327039 heat shock 70kDa protein 4 [Homo sapiens] 34 0.12
gi|62243484 sarcoma antigen NY-SAR-41 [Homo sapiens] 34 0.12
gi|4758304 protein disulfide isomerase A4 [Homo sapiens] 33 0.20
gi|23510360 Ras association domain family 4 [Homo sapiens] 33 0.26
gi|115648142 centrosomal protein 164kDa [Homo sapiens] 33 0.26
gi|148727245 thioredoxin domain-containing 2 isoform 1 [Homo sap... 33 0.26
gi|148727319 thioredoxin domain-containing 2 isoform 2 [Homo sap... 33 0.26
gi|42516570 thioredoxin domain-containing 2 isoform 1 [Homo sapi... 33 0.26
gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens] 33 0.26
gi|188219599 N-myc and STAT interactor [Homo sapiens] 32 0.34
gi|41322923 plectin 1 isoform 11 [Homo sapiens] 32 0.44
gi|41322914 plectin 1 isoform 10 [Homo sapiens] 32 0.44
gi|41322919 plectin 1 isoform 8 [Homo sapiens] 32 0.44
gi|41322910 plectin 1 isoform 7 [Homo sapiens] 32 0.44
gi|41322916 plectin 1 isoform 6 [Homo sapiens] 32 0.44
gi|41322908 plectin 1 isoform 3 [Homo sapiens] 32 0.44
gi|41322912 plectin 1 isoform 2 [Homo sapiens] 32 0.44
gi|47607492 plectin 1 isoform 1 [Homo sapiens] 32 0.44
>gi|18104959 thioredoxin domain containing 9 [Homo sapiens]
Length = 226
Score = 457 bits (1177), Expect = e-129
Identities = 226/226 (100%), Positives = 226/226 (100%)
Query: 1 MEADASVDMFSKVLEHQLLQTTKLVEEHLDSEIQKLDQMDEDELERLKEKRLQALRKAQQ 60
MEADASVDMFSKVLEHQLLQTTKLVEEHLDSEIQKLDQMDEDELERLKEKRLQALRKAQQ
Sbjct: 1 MEADASVDMFSKVLEHQLLQTTKLVEEHLDSEIQKLDQMDEDELERLKEKRLQALRKAQQ 60
Query: 61 QKQEWLSKGHGEYREIPSERDFFQEVKESENVVCHFYRDSTFRCKILDRHLAILSKKHLE 120
QKQEWLSKGHGEYREIPSERDFFQEVKESENVVCHFYRDSTFRCKILDRHLAILSKKHLE
Sbjct: 61 QKQEWLSKGHGEYREIPSERDFFQEVKESENVVCHFYRDSTFRCKILDRHLAILSKKHLE 120
Query: 121 TKFLKLNVEKAPFLCERLHIKVIPTLALLKDGKTQDYVVGFTDLGNTDDFTTETLEWRLG 180
TKFLKLNVEKAPFLCERLHIKVIPTLALLKDGKTQDYVVGFTDLGNTDDFTTETLEWRLG
Sbjct: 121 TKFLKLNVEKAPFLCERLHIKVIPTLALLKDGKTQDYVVGFTDLGNTDDFTTETLEWRLG 180
Query: 181 SSDILNYSGNLMEPPFQNQKKFGTNFTKLEKKTIRGKKYDSDSDDD 226
SSDILNYSGNLMEPPFQNQKKFGTNFTKLEKKTIRGKKYDSDSDDD
Sbjct: 181 SSDILNYSGNLMEPPFQNQKKFGTNFTKLEKKTIRGKKYDSDSDDD 226
>gi|51944950 phosducin-like 2 [Homo sapiens]
Length = 241
Score = 72.8 bits (177), Expect = 2e-13
Identities = 65/229 (28%), Positives = 110/229 (48%), Gaps = 29/229 (12%)
Query: 1 MEADASVDMFSKVLEHQLLQTTKLVEEHLDSEIQKLDQMDEDELERLKEKRLQALRKAQQ 60
++ +A V F K+ QL K E+ D E D +E ++KRLQ KA +
Sbjct: 37 LQKEAMVKPFEKMTLAQL----KEAEDEFDEE-------DMQAVETYRKKRLQEW-KALK 84
Query: 61 QKQEWLSKGHGEYREIPSERDFFQEVKESEN---VVCHFYRDSTFRCKILDRHLAILSKK 117
+KQ++ GE REI S + EV +E V+ H YR S C ++++HL++L++K
Sbjct: 85 KKQKF-----GELREI-SGNQYVNEVTNAEEDVWVIIHLYRSSIPMCLLVNQHLSLLARK 138
Query: 118 HLETKFLKLNVEKAPFLCERLHIKVIPTLALLKDGKTQDYVVGFTDLGNTDDFTTETLEW 177
ETKF+K V + H +PT+ + K+G+ + +G + G + E LEW
Sbjct: 139 FPETKFVKAIVNSC---IQHYHDNCLPTIFVYKNGQIEAKFIGIIECGGI-NLKLEELEW 194
Query: 178 RLGSSDILNYSGNLMEPPFQNQKKFGTNFTKLEKKTIRGKKYDSDSDDD 226
+L +++ +L E P + + + +I S+SD+D
Sbjct: 195 KL--AEVGAIQTDLEENP--RKDMVDMMVSSIRNTSIHDDSDSSNSDND 239
>gi|13129044 phosducin-like 3 [Homo sapiens]
Length = 239
Score = 57.8 bits (138), Expect = 8e-09
Identities = 56/218 (25%), Positives = 102/218 (46%), Gaps = 19/218 (8%)
Query: 15 EHQLLQTTKLVEEHLDSEIQKLDQMDEDELERLKEKRLQALRKAQ--QQKQEWLSKGHGE 72
E Q + +V+ + D +++L+ EDE E+ ++ R+ + + K L GE
Sbjct: 35 EEQRILQQSVVKTYEDMTLEELED-HEDEFNEEDERAIEMYRRRRLAEWKATKLKNKFGE 93
Query: 73 YREIPSERDFFQEVKESEN---VVCHFYRDSTFRCKILDRHLAILSKKHLETKFLK-LNV 128
EI S +D+ QEV ++ V+ H Y+ C ++++HL+ L++K + KF+K ++
Sbjct: 94 VLEI-SGKDYVQEVTKAGEGLWVILHLYKQGIPLCALINQHLSGLARKFPDVKFIKAIST 152
Query: 129 EKAPFLCERLHIKVIPTLALLKDGKTQDYVVGFTDLGNTDDFTTETLEWRLGSSDILNYS 188
P +R +PT+ + +G + +G G + T + LEW+L S
Sbjct: 153 TCIPNYPDR----NLPTIFVYLEGDIKAQFIGPLVFGGM-NLTRDELEWKLSE------S 201
Query: 189 GNLMEPPFQNQKKFGTNFTKLEKKTIRGKKYDSDSDDD 226
G +M +N KK + + K DSDS+ D
Sbjct: 202 GAIMTDLEENPKKPIEDVLLSSVRRSVLMKRDSDSEGD 239
>gi|4505257 moesin [Homo sapiens]
Length = 577
Score = 39.7 bits (91), Expect = 0.002
Identities = 27/99 (27%), Positives = 48/99 (48%), Gaps = 11/99 (11%)
Query: 1 MEADASVDMFSKVLEHQLLQTTKLVEEHLDSEIQKLDQMDEDELERLKEKRLQALRKAQQ 60
M+A A + K +E +L+ K E + E +K+++ E+ +ERLK+ Q +KAQQ
Sbjct: 305 MKAQAREEKHQKQMERAMLENEKKKREMAEKEKEKIEREKEELMERLKQIEEQT-KKAQQ 363
Query: 61 QKQEWL----------SKGHGEYREIPSERDFFQEVKES 89
+ +E + E ++ ER +E KE+
Sbjct: 364 ELEEQTRRALELEQERKRAQSEAEKLAKERQEAEEAKEA 402
>gi|32967591 phosducin isoform a [Homo sapiens]
Length = 246
Score = 38.1 bits (87), Expect = 0.006
Identities = 26/103 (25%), Positives = 47/103 (45%), Gaps = 6/103 (5%)
Query: 56 RKAQQQKQEWLSKG--HGEYREIPSERDFFQEVKES---ENVVCHFYRDSTFRCKILDRH 110
R+ Q + LS G +G E+ + + F + +++ +V H Y D C L+
Sbjct: 95 RQCMQDMHQKLSFGPRYGFVYELETGKQFLETIEKELKITTIVVHIYEDGIKGCDALNSS 154
Query: 111 LAILSKKHLETKFLKLNVEKAPFLCERLHIKVIPTLALLKDGK 153
L L+ ++ KF K+ +R + V+PTL + K G+
Sbjct: 155 LTCLAAEYPIVKFCKIKASNTG-AGDRFSLDVLPTLLIYKGGE 196
>gi|12408668 phosducin isoform b [Homo sapiens]
Length = 194
Score = 38.1 bits (87), Expect = 0.006
Identities = 26/103 (25%), Positives = 47/103 (45%), Gaps = 6/103 (5%)
Query: 56 RKAQQQKQEWLSKG--HGEYREIPSERDFFQEVKES---ENVVCHFYRDSTFRCKILDRH 110
R+ Q + LS G +G E+ + + F + +++ +V H Y D C L+
Sbjct: 43 RQCMQDMHQKLSFGPRYGFVYELETGKQFLETIEKELKITTIVVHIYEDGIKGCDALNSS 102
Query: 111 LAILSKKHLETKFLKLNVEKAPFLCERLHIKVIPTLALLKDGK 153
L L+ ++ KF K+ +R + V+PTL + K G+
Sbjct: 103 LTCLAAEYPIVKFCKIKASNTG-AGDRFSLDVLPTLLIYKGGE 144
>gi|95113651 glutaredoxin 3 [Homo sapiens]
Length = 335
Score = 37.4 bits (85), Expect = 0.011
Identities = 20/75 (26%), Positives = 37/75 (49%)
Query: 86 VKESENVVCHFYRDSTFRCKILDRHLAILSKKHLETKFLKLNVEKAPFLCERLHIKVIPT 145
+K +V HF+ +C ++ +A L+K+ + F+KL E P + E+ I +PT
Sbjct: 28 LKAKSLLVVHFWAPWAPQCAQMNEVMAELAKELPQVSFVKLEAEGVPEVSEKYEISSVPT 87
Query: 146 LALLKDGKTQDYVVG 160
K+ + D + G
Sbjct: 88 FLFFKNSQKIDRLDG 102
>gi|21361403 thioredoxin 2 precursor [Homo sapiens]
Length = 166
Score = 37.4 bits (85), Expect = 0.011
Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 2/92 (2%)
Query: 81 DFFQEVKESEN-VVCHFYRDSTFRCKILDRHLA-ILSKKHLETKFLKLNVEKAPFLCERL 138
DF V SE VV F+ CKIL L +++K+H + K++++ L
Sbjct: 69 DFQDRVVNSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDIDDHTDLAIEY 128
Query: 139 HIKVIPTLALLKDGKTQDYVVGFTDLGNTDDF 170
+ +PT+ +K+G D VG D + F
Sbjct: 129 EVSAVPTVLAMKNGDVVDKFVGIKDEDQLEAF 160
>gi|32698688 citron [Homo sapiens]
Length = 2027
Score = 35.4 bits (80), Expect = 0.040
Identities = 22/94 (23%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Query: 17 QLLQTTKLVEEHLDSEIQKLDQMDEDELERLKEKRLQALRKAQQQKQEWLSKGHGEYREI 76
+LLQ + +E + E++KL Q ED E +++K ++A ++ ++ +S H E
Sbjct: 657 ELLQNIRQAKERAERELEKL-QNREDSSEGIRKKLVEAEELEEKHREAQVSAQHLEVHLK 715
Query: 77 PSERDFFQEVKESENVVCHFYRDSTFRCKILDRH 110
E+ + +++K +N + D ++ RH
Sbjct: 716 QKEQHYEEKIKVLDNQIKKDLADKETLENMMQRH 749
>gi|110611228 utrophin [Homo sapiens]
Length = 3433
Score = 34.7 bits (78), Expect = 0.068
Identities = 34/125 (27%), Positives = 58/125 (46%), Gaps = 18/125 (14%)
Query: 31 SEIQKLDQMDEDELERLKEKRLQA--LRKAQQQKQEWLSKGHGEYREIPSERDF-FQEVK 87
++++KL + + RL E + +A L+K + QEW+++ EY ERDF ++ +
Sbjct: 1104 TQLEKLSKEIATQKSRLSESQEKAANLKKDLAEMQEWMTQAEEEY----LERDFEYKSPE 1159
Query: 88 ESENVVCHFYR------DSTFRCKILDRHLAILSKK-----HLETKFLKLNVEKAPFLCE 136
E E+ V R R KIL ++ +L+ K T L + +E LC
Sbjct: 1160 ELESAVEEMKRAKEDVLQKEVRVKILKDNIKLLAAKVPSGGQELTSELNVVLENYQLLCN 1219
Query: 137 RLHIK 141
R+ K
Sbjct: 1220 RIRGK 1224
>gi|4506467 radixin [Homo sapiens]
Length = 583
Score = 34.3 bits (77), Expect = 0.089
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Query: 1 MEADASVDMFSKVLEHQLLQTTKLVEEHLDSEIQKLDQMDEDELERLKEKRLQALRKAQQ 60
M+A A + K LE L+ K E + E +++++ E+ +ERLK+ Q + KAQ+
Sbjct: 305 MKAQAREEKHQKQLERAQLENEKKKREIAEKEKERIEREKEELMERLKQIEEQTI-KAQK 363
Query: 61 QKQEWLSKGHGEYREIPSERDFFQEVKE 88
+ +E K E+ ER +E E
Sbjct: 364 ELEEQTRKA----LELDQERKRAKEEAE 387
>gi|70980531 GGA binding partner [Homo sapiens]
Length = 441
Score = 34.3 bits (77), Expect = 0.089
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 7/99 (7%)
Query: 26 EEHLDSEIQKLDQMDEDELERLKEKRLQALRKAQQQKQEWLSKGHGEYREIPSERDFFQE 85
EE L+++ Q+L +M + E E LKEK +AL + Q+++E L K E R+ E
Sbjct: 248 EELLNAQHQRLLEMLDTEKELLKEKIKEALIQQSQEQKEILEKCLEEERQRNKEALVSAA 307
Query: 86 VKESENVVCHFYRDSTFRCKILDRHLAILSKKHLETKFL 124
E E V +D+ K+++ L K H E + L
Sbjct: 308 KLEKEAV-----KDAVL--KVVEEERKNLEKAHAEEREL 339
>gi|38327039 heat shock 70kDa protein 4 [Homo sapiens]
Length = 840
Score = 33.9 bits (76), Expect = 0.12
Identities = 44/197 (22%), Positives = 85/197 (43%), Gaps = 20/197 (10%)
Query: 14 LEHQLLQTTKLVEEHLDSEIQKLDQMDEDEL---ERLKEKRLQALRKAQQQKQEWLSKGH 70
+E+QLL +D E+ L +E ++ ++L+++R A ++ E K
Sbjct: 581 IENQLLW-------QIDREMLNLYIENEGKMIMQDKLEKERNDAKNAVEEYVYEMRDKLS 633
Query: 71 GEYREIPSERD---FFQEVKESENVVCHFYRDSTFRCK-ILDRHLAILSKKHLETKFLKL 126
GEY + SE D F +++++EN Y D + K + LA L K
Sbjct: 634 GEYEKFVSEDDRNSFTLKLEDTEN---WLYEDGEDQPKQVYVDKLAELKNLGQPIKIRFQ 690
Query: 127 NVEKAPFLCERLHIKV---IPTLALLKDGKTQDYVVGFTDLGNTDDFTTETLEWRLGSSD 183
E+ P L E L ++ + ++ K+ + Q + D+ + T E +EW +
Sbjct: 691 ESEERPKLFEELGKQIQQYMKIISSFKNKEDQYDHLDAADMTKVEKSTNEAMEWMNNKLN 750
Query: 184 ILNYSGNLMEPPFQNQK 200
+ N M+P ++++
Sbjct: 751 LQNKQSLTMDPVVKSKE 767
>gi|62243484 sarcoma antigen NY-SAR-41 [Homo sapiens]
Length = 1417
Score = 33.9 bits (76), Expect = 0.12
Identities = 29/106 (27%), Positives = 54/106 (50%), Gaps = 6/106 (5%)
Query: 22 TKLVEE--HLDSEIQKLDQMDEDELERLKEKRLQALRKAQQQKQEWLSKGHGEYREIPSE 79
TKL ++ L+ E+QK + ++L +++EK A +A ++Q+ + G R++ E
Sbjct: 933 TKLEKQVSKLEQELQKQRESSAEKLRKMEEKCESAAHEADLKRQKVIEL-TGTARQVKIE 991
Query: 80 RD-FFQEVKESENVVCHFYRDSTFRCKILDRHLAIL--SKKHLETK 122
D + +E+ + E + H RD + L + IL +K LE K
Sbjct: 992 MDQYKEELSKMEKEIMHLKRDGENKAMHLSQLDMILDQTKTELEKK 1037
>gi|4758304 protein disulfide isomerase A4 [Homo sapiens]
Length = 645
Score = 33.1 bits (74), Expect = 0.20
Identities = 31/135 (22%), Positives = 50/135 (37%), Gaps = 26/135 (19%)
Query: 27 EHLDSEIQKLDQMDEDELERLKEKRLQALRKAQQQKQEWLSKGHGEYREIPSERDFFQEV 86
E + E ++ D +ED+LE +E + L A +F V
Sbjct: 39 EDEEEEEEEDDDEEEDDLEVKEENGVLVLNDA----------------------NFDNFV 76
Query: 87 KESENVVCHFYRDSTFRCKIL----DRHLAILSKKHLETKFLKLNVEKAPFLCERLHIKV 142
+ + V+ FY CK ++ IL K K++ A L R +
Sbjct: 77 ADKDTVLLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDATSASVLASRFDVSG 136
Query: 143 IPTLALLKDGKTQDY 157
PT+ +LK G+ DY
Sbjct: 137 YPTIKILKKGQAVDY 151
Score = 33.1 bits (74), Expect = 0.20
Identities = 29/130 (22%), Positives = 57/130 (43%), Gaps = 8/130 (6%)
Query: 32 EIQKLDQMDEDELERLKEKRLQALRKAQQQKQEWLSKGHGEYREIPSERDFFQEVKESEN 91
+I K Q + E R +E+ + +R+ Q +W E + ++ +F + V +++
Sbjct: 141 KILKKGQAVDYEGSRTQEEIVAKVREVSQP--DWTPPP--EVTLVLTKENFDEVVNDADI 196
Query: 92 VVCHFYRDSTFRCKIL----DRHLAILSKKHLETKFLKLNVEKAPFLCERLHIKVIPTLA 147
++ FY CK L ++ LSK+ K++ L +R + PTL
Sbjct: 197 ILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATAETDLAKRFDVSGYPTLK 256
Query: 148 LLKDGKTQDY 157
+ + G+ DY
Sbjct: 257 IFRKGRPYDY 266
>gi|23510360 Ras association domain family 4 [Homo sapiens]
Length = 321
Score = 32.7 bits (73), Expect = 0.26
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
Query: 1 MEADASVDMFSKVLEHQLLQTTKLVEEHLDSEIQKLDQMDEDELERLKEKRLQALRKAQQ 60
MEAD V++ H++ Q K LDS ++KL + +E E+ +L K QALR
Sbjct: 258 MEADLGVEV-----PHEVAQYIKFEMPVLDSFVEKLKEEEEREIIKLTMK-FQALRLTML 311
Query: 61 QKQEWL 66
Q+ E L
Sbjct: 312 QRLEQL 317
>gi|115648142 centrosomal protein 164kDa [Homo sapiens]
Length = 1460
Score = 32.7 bits (73), Expect = 0.26
Identities = 19/76 (25%), Positives = 40/76 (52%)
Query: 5 ASVDMFSKVLEHQLLQTTKLVEEHLDSEIQKLDQMDEDELERLKEKRLQALRKAQQQKQE 64
A + ++VLE + +E + +KL Q +E+E+ RL +++ Q+L +++ Q+
Sbjct: 594 AMEEAVAQVLEQDQRHLLESKQEKMQQLREKLCQEEEEEILRLHQQKEQSLSSLRERLQK 653
Query: 65 WLSKGHGEYREIPSER 80
+ + RE S+R
Sbjct: 654 AIEEEEARMREEESQR 669
Score = 28.9 bits (63), Expect = 3.7
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 7/63 (11%)
Query: 2 EADASVDMFSKVLEHQ-------LLQTTKLVEEHLDSEIQKLDQMDEDELERLKEKRLQA 54
E +AS+ + LE Q L Q + + E L EI+ ++ ++ L KEK LQ
Sbjct: 691 EQEASLQKLREELESQQKAERASLEQKNRQMLEQLKEEIEASEKSEQAALNAAKEKALQQ 750
Query: 55 LRK 57
LR+
Sbjct: 751 LRE 753
Score = 28.9 bits (63), Expect = 3.7
Identities = 14/42 (33%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
Query: 28 HLDSEIQKLDQMDEDELERLKE---KRLQALRKAQQQKQEWL 66
HL E+++L + E ELE +++ KRL+ LR+ ++++ L
Sbjct: 883 HLTGELERLQRAHERELETVRQEQHKRLEDLRRRHREQERKL 924
>gi|148727245 thioredoxin domain-containing 2 isoform 1 [Homo
sapiens]
Length = 486
Score = 32.7 bits (73), Expect = 0.26
Identities = 31/149 (20%), Positives = 60/149 (40%), Gaps = 11/149 (7%)
Query: 23 KLVEEHLDSEIQKLDQMDEDELERLKEKRLQALRKAQQQKQEWLSKGHGEYREIP----- 77
K +EE + + + + E+ ++ ++ ++L +A K+ + K E E P
Sbjct: 324 KSLEEAIPPKEIDIPKSPEETIQPKEDDSPKSLEEATPSKEGDILKPEEETMEFPEGDKV 383
Query: 78 ----SERDFFQEVKESEN--VVCHFYRDSTFRCKILDRHLAILSKKHLETKFLKLNVEKA 131
S+ DF +KE+ V F C+ + LS KH + FL+++ +
Sbjct: 384 KVILSKEDFEASLKEAGERLVAVDFSATWCGPCRTIRPFFHALSVKHEDVVFLEVDADNC 443
Query: 132 PFLCERLHIKVIPTLALLKDGKTQDYVVG 160
+ I +PT K + D + G
Sbjct: 444 EEVVRECAIMCVPTFQFYKKEEKVDELCG 472
>gi|148727319 thioredoxin domain-containing 2 isoform 2 [Homo
sapiens]
Length = 553
Score = 32.7 bits (73), Expect = 0.26
Identities = 31/149 (20%), Positives = 60/149 (40%), Gaps = 11/149 (7%)
Query: 23 KLVEEHLDSEIQKLDQMDEDELERLKEKRLQALRKAQQQKQEWLSKGHGEYREIP----- 77
K +EE + + + + E+ ++ ++ ++L +A K+ + K E E P
Sbjct: 391 KSLEEAIPPKEIDIPKSPEETIQPKEDDSPKSLEEATPSKEGDILKPEEETMEFPEGDKV 450
Query: 78 ----SERDFFQEVKESEN--VVCHFYRDSTFRCKILDRHLAILSKKHLETKFLKLNVEKA 131
S+ DF +KE+ V F C+ + LS KH + FL+++ +
Sbjct: 451 KVILSKEDFEASLKEAGERLVAVDFSATWCGPCRTIRPFFHALSVKHEDVVFLEVDADNC 510
Query: 132 PFLCERLHIKVIPTLALLKDGKTQDYVVG 160
+ I +PT K + D + G
Sbjct: 511 EEVVRECAIMCVPTFQFYKKEEKVDELCG 539
>gi|42516570 thioredoxin domain-containing 2 isoform 1 [Homo
sapiens]
Length = 486
Score = 32.7 bits (73), Expect = 0.26
Identities = 31/149 (20%), Positives = 60/149 (40%), Gaps = 11/149 (7%)
Query: 23 KLVEEHLDSEIQKLDQMDEDELERLKEKRLQALRKAQQQKQEWLSKGHGEYREIP----- 77
K +EE + + + + E+ ++ ++ ++L +A K+ + K E E P
Sbjct: 324 KSLEEAIPPKEIDIPKSPEETIQPKEDDSPKSLEEATPSKEGDILKPEEETMEFPEGDKV 383
Query: 78 ----SERDFFQEVKESEN--VVCHFYRDSTFRCKILDRHLAILSKKHLETKFLKLNVEKA 131
S+ DF +KE+ V F C+ + LS KH + FL+++ +
Sbjct: 384 KVILSKEDFEASLKEAGERLVAVDFSATWCGPCRTIRPFFHALSVKHEDVVFLEVDADNC 443
Query: 132 PFLCERLHIKVIPTLALLKDGKTQDYVVG 160
+ I +PT K + D + G
Sbjct: 444 EEVVRECAIMCVPTFQFYKKEEKVDELCG 472
>gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens]
Length = 2230
Score = 32.7 bits (73), Expect = 0.26
Identities = 31/131 (23%), Positives = 66/131 (50%), Gaps = 21/131 (16%)
Query: 20 QTTKLVEEHLDSEIQKLDQMDEDELERLKE---KRLQAL-RKAQQQKQEWLSKGHGEYRE 75
+ ++++ + +I KL ++ E EL R ++ K+LQ R+ Q+Q + L K EY +
Sbjct: 465 EVVDVMKKSSEEQIAKLQKLHEKELARKEQELTKKLQTREREFQEQMKVALEKSQSEYLK 524
Query: 76 IPSERDFFQE-------------VKESENVVCHFYRDS-TFRCKILDRHLAI---LSKKH 118
I E++ + + ESEN + +++ T+R +IL+ ++ L +
Sbjct: 525 ISQEKEQQESLALEELELQKKAILTESENKLRDLQQEAETYRTRILELESSLEKSLQENK 584
Query: 119 LETKFLKLNVE 129
++K L +++E
Sbjct: 585 NQSKDLAVHLE 595
>gi|188219599 N-myc and STAT interactor [Homo sapiens]
Length = 307
Score = 32.3 bits (72), Expect = 0.34
Identities = 31/134 (23%), Positives = 62/134 (46%), Gaps = 24/134 (17%)
Query: 21 TTKLVEEHLDSEIQKLDQMDEDELERLKEKRLQALRKAQQQKQEWLSKGHGEYR---EIP 77
T ++++EH E K D+ ++ ++ + +K +Q L+K Q+ + L + E++ +IP
Sbjct: 8 TQQILKEHSPDEFIK-DEQNKGLIDEITKKNIQ-LKKEIQKLETELQEATKEFQIKEDIP 65
Query: 78 SERDFFQEVKESEN------VVCHFYRDS-------------TFRCKILDRHLAILSKKH 118
+ F V+ EN + C F S TF + + +++ +SK H
Sbjct: 66 ETKMKFLSVETPENDSQLSNISCSFQVSSKVPYEIQKGQALITFEKEEVAQNVVSMSKHH 125
Query: 119 LETKFLKLNVEKAP 132
++ K + L V P
Sbjct: 126 VQIKDVNLEVTAKP 139
>gi|41322923 plectin 1 isoform 11 [Homo sapiens]
Length = 4547
Score = 32.0 bits (71), Expect = 0.44
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 7/71 (9%)
Query: 3 ADASVDMFSKVLEHQLLQTTKLVEEHLDSEIQKLDQMD------EDELERLKEKRLQALR 56
ADA ++ K E L Q + VE+ L + +L++ D ++EL+RLK + +A R
Sbjct: 2163 ADAEMEKHKKFAEQTLRQKAQ-VEQELTTLRLQLEETDHQKNLLDEELQRLKAEATEAAR 2221
Query: 57 KAQQQKQEWLS 67
+ Q ++E S
Sbjct: 2222 QRSQVEEELFS 2232
Score = 30.8 bits (68), Expect = 0.98
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 14/66 (21%)
Query: 13 VLEHQLLQTTKLV--------------EEHLDSEIQKLDQMDEDELERLKEKRLQALRKA 58
V + QLLQ T+ + E ++ E KL+Q+ +DE+ + ++ R + R+
Sbjct: 2479 VQQEQLLQETQALQQSFLSEKDSLLQRERFIEQEKAKLEQLFQDEVAKAQQLREEQQRQQ 2538
Query: 59 QQQKQE 64
QQ +QE
Sbjct: 2539 QQMEQE 2544
>gi|41322914 plectin 1 isoform 10 [Homo sapiens]
Length = 4551
Score = 32.0 bits (71), Expect = 0.44
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 7/71 (9%)
Query: 3 ADASVDMFSKVLEHQLLQTTKLVEEHLDSEIQKLDQMD------EDELERLKEKRLQALR 56
ADA ++ K E L Q + VE+ L + +L++ D ++EL+RLK + +A R
Sbjct: 2167 ADAEMEKHKKFAEQTLRQKAQ-VEQELTTLRLQLEETDHQKNLLDEELQRLKAEATEAAR 2225
Query: 57 KAQQQKQEWLS 67
+ Q ++E S
Sbjct: 2226 QRSQVEEELFS 2236
Score = 30.8 bits (68), Expect = 0.98
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 14/66 (21%)
Query: 13 VLEHQLLQTTKLV--------------EEHLDSEIQKLDQMDEDELERLKEKRLQALRKA 58
V + QLLQ T+ + E ++ E KL+Q+ +DE+ + ++ R + R+
Sbjct: 2483 VQQEQLLQETQALQQSFLSEKDSLLQRERFIEQEKAKLEQLFQDEVAKAQQLREEQQRQQ 2542
Query: 59 QQQKQE 64
QQ +QE
Sbjct: 2543 QQMEQE 2548
>gi|41322919 plectin 1 isoform 8 [Homo sapiens]
Length = 4547
Score = 32.0 bits (71), Expect = 0.44
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 7/71 (9%)
Query: 3 ADASVDMFSKVLEHQLLQTTKLVEEHLDSEIQKLDQMD------EDELERLKEKRLQALR 56
ADA ++ K E L Q + VE+ L + +L++ D ++EL+RLK + +A R
Sbjct: 2163 ADAEMEKHKKFAEQTLRQKAQ-VEQELTTLRLQLEETDHQKNLLDEELQRLKAEATEAAR 2221
Query: 57 KAQQQKQEWLS 67
+ Q ++E S
Sbjct: 2222 QRSQVEEELFS 2232
Score = 30.8 bits (68), Expect = 0.98
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 14/66 (21%)
Query: 13 VLEHQLLQTTKLV--------------EEHLDSEIQKLDQMDEDELERLKEKRLQALRKA 58
V + QLLQ T+ + E ++ E KL+Q+ +DE+ + ++ R + R+
Sbjct: 2479 VQQEQLLQETQALQQSFLSEKDSLLQRERFIEQEKAKLEQLFQDEVAKAQQLREEQQRQQ 2538
Query: 59 QQQKQE 64
QQ +QE
Sbjct: 2539 QQMEQE 2544
>gi|41322910 plectin 1 isoform 7 [Homo sapiens]
Length = 4515
Score = 32.0 bits (71), Expect = 0.44
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 7/71 (9%)
Query: 3 ADASVDMFSKVLEHQLLQTTKLVEEHLDSEIQKLDQMD------EDELERLKEKRLQALR 56
ADA ++ K E L Q + VE+ L + +L++ D ++EL+RLK + +A R
Sbjct: 2131 ADAEMEKHKKFAEQTLRQKAQ-VEQELTTLRLQLEETDHQKNLLDEELQRLKAEATEAAR 2189
Query: 57 KAQQQKQEWLS 67
+ Q ++E S
Sbjct: 2190 QRSQVEEELFS 2200
Score = 30.8 bits (68), Expect = 0.98
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 14/66 (21%)
Query: 13 VLEHQLLQTTKLV--------------EEHLDSEIQKLDQMDEDELERLKEKRLQALRKA 58
V + QLLQ T+ + E ++ E KL+Q+ +DE+ + ++ R + R+
Sbjct: 2447 VQQEQLLQETQALQQSFLSEKDSLLQRERFIEQEKAKLEQLFQDEVAKAQQLREEQQRQQ 2506
Query: 59 QQQKQE 64
QQ +QE
Sbjct: 2507 QQMEQE 2512
>gi|41322916 plectin 1 isoform 6 [Homo sapiens]
Length = 4684
Score = 32.0 bits (71), Expect = 0.44
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 7/71 (9%)
Query: 3 ADASVDMFSKVLEHQLLQTTKLVEEHLDSEIQKLDQMD------EDELERLKEKRLQALR 56
ADA ++ K E L Q + VE+ L + +L++ D ++EL+RLK + +A R
Sbjct: 2300 ADAEMEKHKKFAEQTLRQKAQ-VEQELTTLRLQLEETDHQKNLLDEELQRLKAEATEAAR 2358
Query: 57 KAQQQKQEWLS 67
+ Q ++E S
Sbjct: 2359 QRSQVEEELFS 2369
Score = 30.8 bits (68), Expect = 0.98
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 14/66 (21%)
Query: 13 VLEHQLLQTTKLV--------------EEHLDSEIQKLDQMDEDELERLKEKRLQALRKA 58
V + QLLQ T+ + E ++ E KL+Q+ +DE+ + ++ R + R+
Sbjct: 2616 VQQEQLLQETQALQQSFLSEKDSLLQRERFIEQEKAKLEQLFQDEVAKAQQLREEQQRQQ 2675
Query: 59 QQQKQE 64
QQ +QE
Sbjct: 2676 QQMEQE 2681
>gi|41322908 plectin 1 isoform 3 [Homo sapiens]
Length = 4525
Score = 32.0 bits (71), Expect = 0.44
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 7/71 (9%)
Query: 3 ADASVDMFSKVLEHQLLQTTKLVEEHLDSEIQKLDQMD------EDELERLKEKRLQALR 56
ADA ++ K E L Q + VE+ L + +L++ D ++EL+RLK + +A R
Sbjct: 2141 ADAEMEKHKKFAEQTLRQKAQ-VEQELTTLRLQLEETDHQKNLLDEELQRLKAEATEAAR 2199
Query: 57 KAQQQKQEWLS 67
+ Q ++E S
Sbjct: 2200 QRSQVEEELFS 2210
Score = 30.8 bits (68), Expect = 0.98
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 14/66 (21%)
Query: 13 VLEHQLLQTTKLV--------------EEHLDSEIQKLDQMDEDELERLKEKRLQALRKA 58
V + QLLQ T+ + E ++ E KL+Q+ +DE+ + ++ R + R+
Sbjct: 2457 VQQEQLLQETQALQQSFLSEKDSLLQRERFIEQEKAKLEQLFQDEVAKAQQLREEQQRQQ 2516
Query: 59 QQQKQE 64
QQ +QE
Sbjct: 2517 QQMEQE 2522
>gi|41322912 plectin 1 isoform 2 [Homo sapiens]
Length = 4533
Score = 32.0 bits (71), Expect = 0.44
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 7/71 (9%)
Query: 3 ADASVDMFSKVLEHQLLQTTKLVEEHLDSEIQKLDQMD------EDELERLKEKRLQALR 56
ADA ++ K E L Q + VE+ L + +L++ D ++EL+RLK + +A R
Sbjct: 2149 ADAEMEKHKKFAEQTLRQKAQ-VEQELTTLRLQLEETDHQKNLLDEELQRLKAEATEAAR 2207
Query: 57 KAQQQKQEWLS 67
+ Q ++E S
Sbjct: 2208 QRSQVEEELFS 2218
Score = 30.8 bits (68), Expect = 0.98
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 14/66 (21%)
Query: 13 VLEHQLLQTTKLV--------------EEHLDSEIQKLDQMDEDELERLKEKRLQALRKA 58
V + QLLQ T+ + E ++ E KL+Q+ +DE+ + ++ R + R+
Sbjct: 2465 VQQEQLLQETQALQQSFLSEKDSLLQRERFIEQEKAKLEQLFQDEVAKAQQLREEQQRQQ 2524
Query: 59 QQQKQE 64
QQ +QE
Sbjct: 2525 QQMEQE 2530
>gi|47607492 plectin 1 isoform 1 [Homo sapiens]
Length = 4574
Score = 32.0 bits (71), Expect = 0.44
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 7/71 (9%)
Query: 3 ADASVDMFSKVLEHQLLQTTKLVEEHLDSEIQKLDQMD------EDELERLKEKRLQALR 56
ADA ++ K E L Q + VE+ L + +L++ D ++EL+RLK + +A R
Sbjct: 2190 ADAEMEKHKKFAEQTLRQKAQ-VEQELTTLRLQLEETDHQKNLLDEELQRLKAEATEAAR 2248
Query: 57 KAQQQKQEWLS 67
+ Q ++E S
Sbjct: 2249 QRSQVEEELFS 2259
Score = 30.8 bits (68), Expect = 0.98
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 14/66 (21%)
Query: 13 VLEHQLLQTTKLV--------------EEHLDSEIQKLDQMDEDELERLKEKRLQALRKA 58
V + QLLQ T+ + E ++ E KL+Q+ +DE+ + ++ R + R+
Sbjct: 2506 VQQEQLLQETQALQQSFLSEKDSLLQRERFIEQEKAKLEQLFQDEVAKAQQLREEQQRQQ 2565
Query: 59 QQQKQE 64
QQ +QE
Sbjct: 2566 QQMEQE 2571
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.134 0.381
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,676,657
Number of Sequences: 37866
Number of extensions: 391837
Number of successful extensions: 2654
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 124
Number of HSP's that attempted gapping in prelim test: 2368
Number of HSP's gapped (non-prelim): 396
length of query: 226
length of database: 18,247,518
effective HSP length: 99
effective length of query: 127
effective length of database: 14,498,784
effective search space: 1841345568
effective search space used: 1841345568
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.