Guide to the Human Genome
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Name: CST11 Sequence: fasta or formatted (103aa) NCBI GI: 18644732
Description:

cystatin 11 isoform 2 precursor

Referenced in:

Protease Inhibitors

Other entries for this name:
alt prot [138aa] cystatin 11 isoform 1 precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.8          8           1
 C cysteine            1.9          2           1
 D aspartate           4.9          5           2
 E glutamate           4.9          5           1
 F phenylalanine       6.8          7           2
 G glycine             0.0          0           0
 H histidine           1.9          2           1
 I isoleucine          3.9          4           1
 K lysine              7.8          8           2
 L leucine            11.7         12           3
 M methionine          3.9          4           2
 N asparagine          3.9          4           1
 P proline             2.9          3           1
 Q glutamine           8.7          9           2
 R arginine            3.9          4           1
 S serine              6.8          7           2
 T threonine           2.9          3           1
 V valine              7.8          8           1
 W tryptophan          2.9          3           1
 Y tyrosine            4.9          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cystatin 11 isoform 2 precursor 
CST11                 0.904   cystatin 11 isoform 1 precursor 
CST9L                 0.086   cystatin 9-like precursor 
CST8                  0.075   cystatin 8 precursor 
CST2                  0.075   cystatin SA precursor 
CST4                  0.064   cystatin S precursor 
CST3                  0.059   cystatin C precursor 
CST1                  0.053   cystatin SN precursor 
CSTL1                 0.021   cystatin-like 1 precursor 
SPTAN1                0.021   spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) ...
SPTAN1                0.021   spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) ...
IL6ST                 0.016   interleukin 6 signal transducer isoform 1 precursor ...
CST6                  0.011   cystatin M precursor 
CST5                  0.011   cystatin D precursor 
CST7                  0.005   cystatin F 
BBS9                  0.005   parathyroid hormone-responsive B1 isoform 4 
BBS9                  0.005   parathyroid hormone-responsive B1 isoform 3 
BBS9                  0.005   parathyroid hormone-responsive B1 isoform 2 
BBS9                  0.005   parathyroid hormone-responsive B1 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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