Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 169217341
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169217341 PREDICTED: hypothetical protein [Homo sapiens]
(102 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169218130 PREDICTED: hypothetical protein [Homo sapiens] 211 8e-56
gi|169217341 PREDICTED: hypothetical protein [Homo sapiens] 211 8e-56
gi|239747129 PREDICTED: hypothetical protein XP_002344491 [Homo ... 186 3e-48
gi|239746550 PREDICTED: hypothetical protein XP_002343775 [Homo ... 180 2e-46
gi|169217749 PREDICTED: hCG2042718 [Homo sapiens] 180 2e-46
gi|239750222 PREDICTED: hCG2042718 [Homo sapiens] 180 2e-46
gi|169166158 PREDICTED: hypothetical protein LOC642204 [Homo sap... 180 2e-46
gi|239750225 PREDICTED: hypothetical protein XP_002347322 [Homo ... 128 8e-31
gi|60460920 ankyrin repeat domain 20 family, member A3 [Homo sap... 124 1e-29
gi|60115723 ankyrin repeat domain 20 family, member A2 [Homo sap... 124 1e-29
gi|156104901 ankyrin repeat domain 20 family, member A1 [Homo sa... 124 1e-29
gi|149363679 ankyrin repeat domain 20 family, member A4 [Homo sa... 124 2e-29
gi|239757009 PREDICTED: ankyrin repeat domain 20 family, member ... 112 8e-26
gi|239751523 PREDICTED: ankyrin repeat domain 20 family, member ... 112 8e-26
gi|239755047 PREDICTED: ankyrin repeat domain 18A [Homo sapiens] 78 1e-15
gi|239749578 PREDICTED: ankyrin repeat domain 18A [Homo sapiens] 78 1e-15
gi|239743724 PREDICTED: ankyrin repeat domain 18A [Homo sapiens] 78 1e-15
gi|239755011 PREDICTED: ankyrin repeat domain 18B [Homo sapiens] 74 2e-14
gi|239749555 PREDICTED: ankyrin repeat domain 18B [Homo sapiens] 74 2e-14
gi|239743705 PREDICTED: ankyrin repeat domain 18B [Homo sapiens] 73 4e-14
gi|154354990 ankyrin repeat domain 26 [Homo sapiens] 47 3e-06
gi|239756999 PREDICTED: ankyrin repeat domain 62 [Homo sapiens] 41 2e-04
gi|239751514 PREDICTED: ankyrin repeat domain 62 isoform 4 [Homo... 41 2e-04
gi|239746016 PREDICTED: ankyrin repeat domain 62 isoform 1 [Homo... 41 2e-04
gi|15011946 tripartite motif protein TRIM5 isoform delta [Homo s... 39 9e-04
gi|7706194 proline rich 16 [Homo sapiens] 38 0.002
gi|51972186 coiled-coil domain containing 144 family, N-terminal... 37 0.003
gi|96975023 ankyrin repeat and death domain containing 1A [Homo ... 37 0.003
gi|116517224 coiled-coil domain containing 144B [Homo sapiens] 37 0.003
gi|149363642 coiled-coil domain containing 144A [Homo sapiens] 37 0.003
>gi|169218130 PREDICTED: hypothetical protein [Homo sapiens]
Length = 102
Score = 211 bits (538), Expect = 8e-56
Identities = 102/102 (100%), Positives = 102/102 (100%)
Query: 1 MKLFGFGSCRGQRAHGSIEHVYMGSGYRIRDSELQKIHRAAVKGDAAGVERCLARRSGGL 60
MKLFGFGSCRGQRAHGSIEHVYMGSGYRIRDSELQKIHRAAVKGDAAGVERCLARRSGGL
Sbjct: 1 MKLFGFGSCRGQRAHGSIEHVYMGSGYRIRDSELQKIHRAAVKGDAAGVERCLARRSGGL 60
Query: 61 DALDKQHRVSLLCPGWCPMAQSGLTATSACSVQAILLPQLPK 102
DALDKQHRVSLLCPGWCPMAQSGLTATSACSVQAILLPQLPK
Sbjct: 61 DALDKQHRVSLLCPGWCPMAQSGLTATSACSVQAILLPQLPK 102
>gi|169217341 PREDICTED: hypothetical protein [Homo sapiens]
Length = 102
Score = 211 bits (538), Expect = 8e-56
Identities = 102/102 (100%), Positives = 102/102 (100%)
Query: 1 MKLFGFGSCRGQRAHGSIEHVYMGSGYRIRDSELQKIHRAAVKGDAAGVERCLARRSGGL 60
MKLFGFGSCRGQRAHGSIEHVYMGSGYRIRDSELQKIHRAAVKGDAAGVERCLARRSGGL
Sbjct: 1 MKLFGFGSCRGQRAHGSIEHVYMGSGYRIRDSELQKIHRAAVKGDAAGVERCLARRSGGL 60
Query: 61 DALDKQHRVSLLCPGWCPMAQSGLTATSACSVQAILLPQLPK 102
DALDKQHRVSLLCPGWCPMAQSGLTATSACSVQAILLPQLPK
Sbjct: 61 DALDKQHRVSLLCPGWCPMAQSGLTATSACSVQAILLPQLPK 102
>gi|239747129 PREDICTED: hypothetical protein XP_002344491 [Homo
sapiens]
Length = 102
Score = 186 bits (473), Expect = 3e-48
Identities = 93/102 (91%), Positives = 93/102 (91%)
Query: 1 MKLFGFGSCRGQRAHGSIEHVYMGSGYRIRDSELQKIHRAAVKGDAAGVERCLARRSGGL 60
MKLFGFGS RGQ AHGSIEHVY GSGYRIRDSELQKIHRAAVKGDA GVERCLARRSG L
Sbjct: 1 MKLFGFGSRRGQTAHGSIEHVYTGSGYRIRDSELQKIHRAAVKGDAVGVERCLARRSGDL 60
Query: 61 DALDKQHRVSLLCPGWCPMAQSGLTATSACSVQAILLPQLPK 102
DALDKQHRVSLLCPGWCPMAQS LTATSAC VQAILLPQ K
Sbjct: 61 DALDKQHRVSLLCPGWCPMAQSWLTATSACWVQAILLPQPSK 102
>gi|239746550 PREDICTED: hypothetical protein XP_002343775 [Homo
sapiens]
Length = 102
Score = 180 bits (457), Expect = 2e-46
Identities = 90/99 (90%), Positives = 91/99 (91%)
Query: 1 MKLFGFGSCRGQRAHGSIEHVYMGSGYRIRDSELQKIHRAAVKGDAAGVERCLARRSGGL 60
MKLFGFGS R Q A+GSIEHVY GSGYRI DSELQKIHRAAVKGDAAGVERCLARRSG L
Sbjct: 1 MKLFGFGSRRSQTANGSIEHVYTGSGYRIWDSELQKIHRAAVKGDAAGVERCLARRSGDL 60
Query: 61 DALDKQHRVSLLCPGWCPMAQSGLTATSACSVQAILLPQ 99
DALDKQHRVSLLCPGWCPMAQS LTATSAC VQAILLPQ
Sbjct: 61 DALDKQHRVSLLCPGWCPMAQSWLTATSACRVQAILLPQ 99
>gi|169217749 PREDICTED: hCG2042718 [Homo sapiens]
Length = 102
Score = 180 bits (456), Expect = 2e-46
Identities = 91/102 (89%), Positives = 91/102 (89%)
Query: 1 MKLFGFGSCRGQRAHGSIEHVYMGSGYRIRDSELQKIHRAAVKGDAAGVERCLARRSGGL 60
MKLFGFGS RGQ AHGSIEHVY GS YRI DSELQKIHRAAVKGDAAGVE CLARRSG L
Sbjct: 1 MKLFGFGSRRGQTAHGSIEHVYTGSRYRIWDSELQKIHRAAVKGDAAGVECCLARRSGDL 60
Query: 61 DALDKQHRVSLLCPGWCPMAQSGLTATSACSVQAILLPQLPK 102
DA DKQHRVSLLCPGWCPMAQS LTATSAC VQAILLPQ PK
Sbjct: 61 DAPDKQHRVSLLCPGWCPMAQSWLTATSACRVQAILLPQPPK 102
>gi|239750222 PREDICTED: hCG2042718 [Homo sapiens]
Length = 102
Score = 180 bits (456), Expect = 2e-46
Identities = 91/102 (89%), Positives = 91/102 (89%)
Query: 1 MKLFGFGSCRGQRAHGSIEHVYMGSGYRIRDSELQKIHRAAVKGDAAGVERCLARRSGGL 60
MKLFGFGS RGQ AHGSIEHVY GS YRI DSELQKIHRAAVKGDAAGVE CLARRSG L
Sbjct: 1 MKLFGFGSRRGQTAHGSIEHVYTGSRYRIWDSELQKIHRAAVKGDAAGVECCLARRSGDL 60
Query: 61 DALDKQHRVSLLCPGWCPMAQSGLTATSACSVQAILLPQLPK 102
DA DKQHRVSLLCPGWCPMAQS LTATSAC VQAILLPQ PK
Sbjct: 61 DAPDKQHRVSLLCPGWCPMAQSWLTATSACRVQAILLPQPPK 102
>gi|169166158 PREDICTED: hypothetical protein LOC642204 [Homo
sapiens]
Length = 102
Score = 180 bits (456), Expect = 2e-46
Identities = 91/102 (89%), Positives = 91/102 (89%)
Query: 1 MKLFGFGSCRGQRAHGSIEHVYMGSGYRIRDSELQKIHRAAVKGDAAGVERCLARRSGGL 60
MKLFGFGS RGQ AHGSIEHVY GS YRI DSELQKIHRAAVKGDAAGVE CLARRSG L
Sbjct: 1 MKLFGFGSRRGQTAHGSIEHVYTGSRYRIWDSELQKIHRAAVKGDAAGVECCLARRSGDL 60
Query: 61 DALDKQHRVSLLCPGWCPMAQSGLTATSACSVQAILLPQLPK 102
DA DKQHRVSLLCPGWCPMAQS LTATSAC VQAILLPQ PK
Sbjct: 61 DAPDKQHRVSLLCPGWCPMAQSWLTATSACRVQAILLPQPPK 102
>gi|239750225 PREDICTED: hypothetical protein XP_002347322 [Homo
sapiens]
Length = 68
Score = 128 bits (322), Expect = 8e-31
Identities = 63/68 (92%), Positives = 63/68 (92%)
Query: 1 MKLFGFGSCRGQRAHGSIEHVYMGSGYRIRDSELQKIHRAAVKGDAAGVERCLARRSGGL 60
MKLFGFGS RGQ AHGSIEHVY GSGYRIRDSELQKIHRAAVKGDA GVERCLARRSG L
Sbjct: 1 MKLFGFGSRRGQTAHGSIEHVYTGSGYRIRDSELQKIHRAAVKGDAVGVERCLARRSGDL 60
Query: 61 DALDKQHR 68
DALDKQHR
Sbjct: 61 DALDKQHR 68
>gi|60460920 ankyrin repeat domain 20 family, member A3 [Homo
sapiens]
Length = 823
Score = 124 bits (312), Expect = 1e-29
Identities = 62/71 (87%), Positives = 64/71 (90%)
Query: 1 MKLFGFGSCRGQRAHGSIEHVYMGSGYRIRDSELQKIHRAAVKGDAAGVERCLARRSGGL 60
MKLFGFGS RGQ A GSI+HVY GSGYRIRDSELQKIHRAAVKGDAA VERCLARRSG L
Sbjct: 1 MKLFGFGSRRGQTAQGSIDHVYTGSGYRIRDSELQKIHRAAVKGDAAEVERCLARRSGDL 60
Query: 61 DALDKQHRVSL 71
DALDKQHR +L
Sbjct: 61 DALDKQHRTAL 71
>gi|60115723 ankyrin repeat domain 20 family, member A2 [Homo
sapiens]
Length = 823
Score = 124 bits (312), Expect = 1e-29
Identities = 62/71 (87%), Positives = 64/71 (90%)
Query: 1 MKLFGFGSCRGQRAHGSIEHVYMGSGYRIRDSELQKIHRAAVKGDAAGVERCLARRSGGL 60
MKLFGFGS RGQ A GSI+HVY GSGYRIRDSELQKIHRAAVKGDAA VERCLARRSG L
Sbjct: 1 MKLFGFGSRRGQTAQGSIDHVYTGSGYRIRDSELQKIHRAAVKGDAAEVERCLARRSGDL 60
Query: 61 DALDKQHRVSL 71
DALDKQHR +L
Sbjct: 61 DALDKQHRTAL 71
>gi|156104901 ankyrin repeat domain 20 family, member A1 [Homo
sapiens]
Length = 823
Score = 124 bits (312), Expect = 1e-29
Identities = 62/71 (87%), Positives = 64/71 (90%)
Query: 1 MKLFGFGSCRGQRAHGSIEHVYMGSGYRIRDSELQKIHRAAVKGDAAGVERCLARRSGGL 60
MKLFGFGS RGQ A GSI+HVY GSGYRIRDSELQKIHRAAVKGDAA VERCLARRSG L
Sbjct: 1 MKLFGFGSRRGQTAQGSIDHVYTGSGYRIRDSELQKIHRAAVKGDAAEVERCLARRSGDL 60
Query: 61 DALDKQHRVSL 71
DALDKQHR +L
Sbjct: 61 DALDKQHRTAL 71
>gi|149363679 ankyrin repeat domain 20 family, member A4 [Homo
sapiens]
Length = 823
Score = 124 bits (311), Expect = 2e-29
Identities = 62/71 (87%), Positives = 64/71 (90%)
Query: 1 MKLFGFGSCRGQRAHGSIEHVYMGSGYRIRDSELQKIHRAAVKGDAAGVERCLARRSGGL 60
MKLFGFGS RGQ A GSI+HVY GSGYRIRDSELQKIHRAAVKGDAA VERCLARRSG L
Sbjct: 1 MKLFGFGSRRGQTAQGSIDHVYTGSGYRIRDSELQKIHRAAVKGDAAEVERCLARRSGEL 60
Query: 61 DALDKQHRVSL 71
DALDKQHR +L
Sbjct: 61 DALDKQHRTAL 71
>gi|239757009 PREDICTED: ankyrin repeat domain 20 family, member
A5 [Homo sapiens]
Length = 823
Score = 112 bits (279), Expect = 8e-26
Identities = 56/71 (78%), Positives = 61/71 (85%)
Query: 1 MKLFGFGSCRGQRAHGSIEHVYMGSGYRIRDSELQKIHRAAVKGDAAGVERCLARRSGGL 60
MKLFGF S RGQ GSI+H+Y GSGYRIR SELQKIH+AAVKGDAA +ERCLARRSG L
Sbjct: 1 MKLFGFRSRRGQTVLGSIDHLYTGSGYRIRYSELQKIHKAAVKGDAAEMERCLARRSGDL 60
Query: 61 DALDKQHRVSL 71
DALDKQHR +L
Sbjct: 61 DALDKQHRTAL 71
>gi|239751523 PREDICTED: ankyrin repeat domain 20 family, member
A5 [Homo sapiens]
Length = 823
Score = 112 bits (279), Expect = 8e-26
Identities = 56/71 (78%), Positives = 61/71 (85%)
Query: 1 MKLFGFGSCRGQRAHGSIEHVYMGSGYRIRDSELQKIHRAAVKGDAAGVERCLARRSGGL 60
MKLFGF S RGQ GSI+H+Y GSGYRIR SELQKIH+AAVKGDAA +ERCLARRSG L
Sbjct: 1 MKLFGFRSRRGQTVLGSIDHLYTGSGYRIRYSELQKIHKAAVKGDAAEMERCLARRSGDL 60
Query: 61 DALDKQHRVSL 71
DALDKQHR +L
Sbjct: 61 DALDKQHRTAL 71
>gi|239755047 PREDICTED: ankyrin repeat domain 18A [Homo sapiens]
Length = 1415
Score = 78.2 bits (191), Expect = 1e-15
Identities = 41/70 (58%), Positives = 47/70 (67%)
Query: 2 KLFGFGSCRGQRAHGSIEHVYMGSGYRIRDSELQKIHRAAVKGDAAGVERCLARRSGGLD 61
KLF FG GQ S++ Y G GY IRD EL+KIHRAA+KGDAA VERCL RR LD
Sbjct: 110 KLFSFGRRLGQALLSSMDQEYAGPGYDIRDWELRKIHRAAIKGDAAEVERCLTRRFRDLD 169
Query: 62 ALDKQHRVSL 71
A D++ R L
Sbjct: 170 ARDRKDRTVL 179
>gi|239749578 PREDICTED: ankyrin repeat domain 18A [Homo sapiens]
Length = 1002
Score = 78.2 bits (191), Expect = 1e-15
Identities = 41/70 (58%), Positives = 47/70 (67%)
Query: 2 KLFGFGSCRGQRAHGSIEHVYMGSGYRIRDSELQKIHRAAVKGDAAGVERCLARRSGGLD 61
KLF FG GQ S++ Y G GY IRD EL+KIHRAA+KGDAA VERCL RR LD
Sbjct: 3 KLFSFGRRLGQALLSSMDQEYAGPGYDIRDWELRKIHRAAIKGDAAEVERCLTRRFRDLD 62
Query: 62 ALDKQHRVSL 71
A D++ R L
Sbjct: 63 ARDRKDRTVL 72
>gi|239743724 PREDICTED: ankyrin repeat domain 18A [Homo sapiens]
Length = 1415
Score = 78.2 bits (191), Expect = 1e-15
Identities = 41/70 (58%), Positives = 47/70 (67%)
Query: 2 KLFGFGSCRGQRAHGSIEHVYMGSGYRIRDSELQKIHRAAVKGDAAGVERCLARRSGGLD 61
KLF FG GQ S++ Y G GY IRD EL+KIHRAA+KGDAA VERCL RR LD
Sbjct: 110 KLFSFGRRLGQALLSSMDQEYAGPGYDIRDWELRKIHRAAIKGDAAEVERCLTRRFRDLD 169
Query: 62 ALDKQHRVSL 71
A D++ R L
Sbjct: 170 ARDRKDRTVL 179
>gi|239755011 PREDICTED: ankyrin repeat domain 18B [Homo sapiens]
Length = 1363
Score = 74.3 bits (181), Expect = 2e-14
Identities = 39/70 (55%), Positives = 44/70 (62%)
Query: 2 KLFGFGSCRGQRAHGSIEHVYMGSGYRIRDSELQKIHRAAVKGDAAGVERCLARRSGGLD 61
KL FG GQ S++ Y G GY IRD EL+KIHRAA+KGDAA VE CL RR LD
Sbjct: 102 KLLSFGRRLGQALLSSMDQEYAGRGYHIRDWELRKIHRAAIKGDAAEVEHCLTRRFRDLD 161
Query: 62 ALDKQHRVSL 71
DK+ R L
Sbjct: 162 VRDKKDRTVL 171
>gi|239749555 PREDICTED: ankyrin repeat domain 18B [Homo sapiens]
Length = 1366
Score = 74.3 bits (181), Expect = 2e-14
Identities = 39/70 (55%), Positives = 44/70 (62%)
Query: 2 KLFGFGSCRGQRAHGSIEHVYMGSGYRIRDSELQKIHRAAVKGDAAGVERCLARRSGGLD 61
KL FG GQ S++ Y G GY IRD EL+KIHRAA+KGDAA VE CL RR LD
Sbjct: 131 KLLSFGRRLGQALLSSMDQEYAGRGYHIRDWELRKIHRAAIKGDAAEVEHCLTRRFRDLD 190
Query: 62 ALDKQHRVSL 71
DK+ R L
Sbjct: 191 VRDKKDRTVL 200
>gi|239743705 PREDICTED: ankyrin repeat domain 18B [Homo sapiens]
Length = 1139
Score = 73.2 bits (178), Expect = 4e-14
Identities = 38/70 (54%), Positives = 44/70 (62%)
Query: 2 KLFGFGSCRGQRAHGSIEHVYMGSGYRIRDSELQKIHRAAVKGDAAGVERCLARRSGGLD 61
KL FG GQ S++ Y G GY IRD EL+KIHRAA+KGDAA VE CL RR LD
Sbjct: 131 KLLSFGRRLGQALLSSMDQEYAGRGYHIRDWELRKIHRAAIKGDAAEVEHCLTRRFRDLD 190
Query: 62 ALDKQHRVSL 71
D++ R L
Sbjct: 191 VRDRKDRTVL 200
>gi|154354990 ankyrin repeat domain 26 [Homo sapiens]
Length = 1710
Score = 47.0 bits (110), Expect = 3e-06
Identities = 23/53 (43%), Positives = 32/53 (60%)
Query: 19 EHVYMGSGYRIRDSELQKIHRAAVKGDAAGVERCLARRSGGLDALDKQHRVSL 71
E Y GY +RD +L KIH+AA G+ A V++ L R GL+ DK +R +L
Sbjct: 32 EGAYSQPGYHVRDRDLGKIHKAASAGNVAKVQQILLLRKNGLNDRDKMNRTAL 84
>gi|239756999 PREDICTED: ankyrin repeat domain 62 [Homo sapiens]
Length = 917
Score = 40.8 bits (94), Expect = 2e-04
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 22 YMGSGYRIRDSELQKIHRAAVKGDAAGVERCLARRSGGLDALDKQHRVSLLCPGWCPMAQ 81
+ GYR+R +L IH+AA+ GD V + R L+ DK++R +LL C +
Sbjct: 27 FSNPGYRVRQKDLGMIHKAAIAGDVNKVMESILLRLNDLNDRDKKNRTALLLA--CAHGR 84
Query: 82 SGLTA 86
G+ A
Sbjct: 85 PGVVA 89
>gi|239751514 PREDICTED: ankyrin repeat domain 62 isoform 4 [Homo
sapiens]
Length = 917
Score = 40.8 bits (94), Expect = 2e-04
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 22 YMGSGYRIRDSELQKIHRAAVKGDAAGVERCLARRSGGLDALDKQHRVSLLCPGWCPMAQ 81
+ GYR+R +L IH+AA+ GD V + R L+ DK++R +LL C +
Sbjct: 27 FSNPGYRVRQKDLGMIHKAAIAGDVNKVMESILLRLNDLNDRDKKNRTALLLA--CAHGR 84
Query: 82 SGLTA 86
G+ A
Sbjct: 85 PGVVA 89
>gi|239746016 PREDICTED: ankyrin repeat domain 62 isoform 1 [Homo
sapiens]
Length = 917
Score = 40.8 bits (94), Expect = 2e-04
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 22 YMGSGYRIRDSELQKIHRAAVKGDAAGVERCLARRSGGLDALDKQHRVSLLCPGWCPMAQ 81
+ GYR+R +L IH+AA+ GD V + R L+ DK++R +LL C +
Sbjct: 27 FSNPGYRVRQKDLGMIHKAAIAGDVNKVMESILLRLNDLNDRDKKNRTALLLA--CAHGR 84
Query: 82 SGLTA 86
G+ A
Sbjct: 85 PGVVA 89
>gi|15011946 tripartite motif protein TRIM5 isoform delta [Homo
sapiens]
Length = 326
Score = 38.9 bits (89), Expect = 9e-04
Identities = 18/28 (64%), Positives = 20/28 (71%)
Query: 75 GWCPMAQSGLTATSACSVQAILLPQLPK 102
GW MA+S TATS +QAILLPQ PK
Sbjct: 299 GWSAMARSRFTATSTSQIQAILLPQPPK 326
>gi|7706194 proline rich 16 [Homo sapiens]
Length = 281
Score = 37.7 bits (86), Expect = 0.002
Identities = 19/21 (90%), Positives = 19/21 (90%)
Query: 79 MAQSGLTATSACSVQAILLPQ 99
MAQSGLTATSA VQAILLPQ
Sbjct: 1 MAQSGLTATSASQVQAILLPQ 21
>gi|51972186 coiled-coil domain containing 144 family, N-terminal
like [Homo sapiens]
Length = 221
Score = 37.4 bits (85), Expect = 0.003
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 7/70 (10%)
Query: 5 GFGSCRGQRAHGSIEHVYMGSGYRIRDSELQKIHRAAVKGDAAGVERCLARRSGGLDALD 64
G S G+ A ++H +R +L ++HRAA GD GVE LA G+D D
Sbjct: 59 GSESKHGEGALDQLQH-------DVRLEDLGELHRAARSGDVPGVEHVLAPGDTGVDKRD 111
Query: 65 KQHRVSLLCP 74
++ + L P
Sbjct: 112 RKKSIQQLVP 121
>gi|96975023 ankyrin repeat and death domain containing 1A [Homo
sapiens]
Length = 522
Score = 37.4 bits (85), Expect = 0.003
Identities = 18/28 (64%), Positives = 21/28 (75%)
Query: 75 GWCPMAQSGLTATSACSVQAILLPQLPK 102
GW MA+S LTATSA VQ IL+PQ P+
Sbjct: 495 GWSTMARSQLTATSASRVQMILVPQPPE 522
>gi|116517224 coiled-coil domain containing 144B [Homo sapiens]
Length = 725
Score = 37.0 bits (84), Expect = 0.003
Identities = 18/46 (39%), Positives = 26/46 (56%)
Query: 29 IRDSELQKIHRAAVKGDAAGVERCLARRSGGLDALDKQHRVSLLCP 74
+R +L ++HRAA GD GVE LA G+D D++ + L P
Sbjct: 76 VRLEDLGELHRAARSGDVPGVEHVLAPGDTGVDKRDRKKSIQQLVP 121
>gi|149363642 coiled-coil domain containing 144A [Homo sapiens]
Length = 1427
Score = 37.0 bits (84), Expect = 0.003
Identities = 18/46 (39%), Positives = 26/46 (56%)
Query: 29 IRDSELQKIHRAAVKGDAAGVERCLARRSGGLDALDKQHRVSLLCP 74
+R +L ++HRAA GD GVE LA G+D D++ + L P
Sbjct: 76 VRLEDLGELHRAARSGDVPGVEHILAPGDTGVDKRDRKKSIQQLVP 121
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.323 0.136 0.427
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,714,872
Number of Sequences: 37866
Number of extensions: 130344
Number of successful extensions: 361
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 303
Number of HSP's gapped (non-prelim): 58
length of query: 102
length of database: 18,247,518
effective HSP length: 73
effective length of query: 29
effective length of database: 15,483,300
effective search space: 449015700
effective search space used: 449015700
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.