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Search of human proteins with 169213867
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169213867 PREDICTED: hypothetical protein LOC100128682 [Homo
sapiens]
(299 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169213867 PREDICTED: hypothetical protein LOC100128682 [Homo ... 638 0.0
gi|169214305 PREDICTED: hypothetical protein LOC100128682 [Homo ... 638 0.0
gi|169213267 PREDICTED: hypothetical protein LOC100128682 [Homo ... 638 0.0
gi|169216486 PREDICTED: hCG_1742852 [Homo sapiens] 107 2e-23
gi|169216528 PREDICTED: hCG_1742852 [Homo sapiens] 107 2e-23
gi|239747074 PREDICTED: hypothetical protein XP_002343911 [Homo ... 103 2e-22
gi|169216761 PREDICTED: hCG_1742852 [Homo sapiens] 103 2e-22
gi|33188429 tetratricopeptide repeat protein isoform 1 [Homo sap... 96 5e-20
gi|148664240 hypothetical protein LOC146556 isoform 1 [Homo sapi... 79 4e-15
gi|228480284 Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRN... 69 4e-12
gi|149588643 zinc finger protein 283 [Homo sapiens] 62 8e-10
gi|14277126 peptidylprolyl isomerase-like 3 isoform PPIL3a [Homo... 52 8e-07
gi|237858668 hypothetical protein LOC123207 isoform d [Homo sapi... 49 7e-06
gi|193794843 BEN domain containing 2 [Homo sapiens] 49 7e-06
gi|19743817 integrin beta 1 isoform 1C-1 precursor [Homo sapiens] 48 9e-06
gi|238908517 colony stimulating factor 2 receptor alpha chain is... 48 1e-05
gi|40789270 zinc finger protein 573 [Homo sapiens] 48 1e-05
gi|62243734 signal transducing adaptor family member 2 isoform 1... 47 2e-05
gi|205830426 solute carrier family 39 (zinc transporter), member... 46 3e-05
gi|121583542 mitogen-activated protein kinase kinase kinase 15 [... 46 5e-05
gi|169213800 PREDICTED: hypothetical protein [Homo sapiens] 44 2e-04
gi|169214229 PREDICTED: hypothetical protein [Homo sapiens] 44 2e-04
gi|169213573 PREDICTED: hypothetical protein [Homo sapiens] 44 2e-04
gi|194473995 zinc finger protein 195 isoform 2 [Homo sapiens] 43 3e-04
gi|194473688 zinc finger protein 195 isoform 1 [Homo sapiens] 43 3e-04
gi|19743821 integrin beta 1 isoform 1C-2 precursor [Homo sapiens] 42 5e-04
gi|15718702 caspase 7 isoform beta [Homo sapiens] 41 0.001
gi|63999355 chromosome 9 open reading frame 37 [Homo sapiens] 41 0.001
gi|59933284 RUN domain containing 2B [Homo sapiens] 41 0.001
gi|28212280 hypothetical protein LOC283579 [Homo sapiens] 39 0.006
>gi|169213867 PREDICTED: hypothetical protein LOC100128682 [Homo
sapiens]
Length = 299
Score = 638 bits (1645), Expect = 0.0
Identities = 299/299 (100%), Positives = 299/299 (100%)
Query: 1 MPEGSVSAMRTSPKSSWPWCCSWSCAWSSSSPPWRSPPSATGTLCRSCSLAPSGDLEVLK 60
MPEGSVSAMRTSPKSSWPWCCSWSCAWSSSSPPWRSPPSATGTLCRSCSLAPSGDLEVLK
Sbjct: 1 MPEGSVSAMRTSPKSSWPWCCSWSCAWSSSSPPWRSPPSATGTLCRSCSLAPSGDLEVLK 60
Query: 61 SQETGCRDPLQLPGLLGPCALSPMVGSPSGRVKLVGRRSVVQCSRCCIDPLIFFVFVFIL 120
SQETGCRDPLQLPGLLGPCALSPMVGSPSGRVKLVGRRSVVQCSRCCIDPLIFFVFVFIL
Sbjct: 61 SQETGCRDPLQLPGLLGPCALSPMVGSPSGRVKLVGRRSVVQCSRCCIDPLIFFVFVFIL 120
Query: 121 FCFVFEMESCSVTQAGVQWCDDLGSLQPPPPGFSCLSLPGSWDYRHPPPHPANFCIFSRD 180
FCFVFEMESCSVTQAGVQWCDDLGSLQPPPPGFSCLSLPGSWDYRHPPPHPANFCIFSRD
Sbjct: 121 FCFVFEMESCSVTQAGVQWCDDLGSLQPPPPGFSCLSLPGSWDYRHPPPHPANFCIFSRD 180
Query: 181 EVSTPTQAGVKLLTASDLPTLASQSVAITGVSHHAQPNPLIFCFSSSTVRKAFDRGPRRW 240
EVSTPTQAGVKLLTASDLPTLASQSVAITGVSHHAQPNPLIFCFSSSTVRKAFDRGPRRW
Sbjct: 181 EVSTPTQAGVKLLTASDLPTLASQSVAITGVSHHAQPNPLIFCFSSSTVRKAFDRGPRRW 240
Query: 241 QHGGGLTVWVVVKALESQLQREDVDLRDGQCHLHRRLEAPAWGNLLGKEGSKRGTMKQN 299
QHGGGLTVWVVVKALESQLQREDVDLRDGQCHLHRRLEAPAWGNLLGKEGSKRGTMKQN
Sbjct: 241 QHGGGLTVWVVVKALESQLQREDVDLRDGQCHLHRRLEAPAWGNLLGKEGSKRGTMKQN 299
>gi|169214305 PREDICTED: hypothetical protein LOC100128682 [Homo
sapiens]
Length = 299
Score = 638 bits (1645), Expect = 0.0
Identities = 299/299 (100%), Positives = 299/299 (100%)
Query: 1 MPEGSVSAMRTSPKSSWPWCCSWSCAWSSSSPPWRSPPSATGTLCRSCSLAPSGDLEVLK 60
MPEGSVSAMRTSPKSSWPWCCSWSCAWSSSSPPWRSPPSATGTLCRSCSLAPSGDLEVLK
Sbjct: 1 MPEGSVSAMRTSPKSSWPWCCSWSCAWSSSSPPWRSPPSATGTLCRSCSLAPSGDLEVLK 60
Query: 61 SQETGCRDPLQLPGLLGPCALSPMVGSPSGRVKLVGRRSVVQCSRCCIDPLIFFVFVFIL 120
SQETGCRDPLQLPGLLGPCALSPMVGSPSGRVKLVGRRSVVQCSRCCIDPLIFFVFVFIL
Sbjct: 61 SQETGCRDPLQLPGLLGPCALSPMVGSPSGRVKLVGRRSVVQCSRCCIDPLIFFVFVFIL 120
Query: 121 FCFVFEMESCSVTQAGVQWCDDLGSLQPPPPGFSCLSLPGSWDYRHPPPHPANFCIFSRD 180
FCFVFEMESCSVTQAGVQWCDDLGSLQPPPPGFSCLSLPGSWDYRHPPPHPANFCIFSRD
Sbjct: 121 FCFVFEMESCSVTQAGVQWCDDLGSLQPPPPGFSCLSLPGSWDYRHPPPHPANFCIFSRD 180
Query: 181 EVSTPTQAGVKLLTASDLPTLASQSVAITGVSHHAQPNPLIFCFSSSTVRKAFDRGPRRW 240
EVSTPTQAGVKLLTASDLPTLASQSVAITGVSHHAQPNPLIFCFSSSTVRKAFDRGPRRW
Sbjct: 181 EVSTPTQAGVKLLTASDLPTLASQSVAITGVSHHAQPNPLIFCFSSSTVRKAFDRGPRRW 240
Query: 241 QHGGGLTVWVVVKALESQLQREDVDLRDGQCHLHRRLEAPAWGNLLGKEGSKRGTMKQN 299
QHGGGLTVWVVVKALESQLQREDVDLRDGQCHLHRRLEAPAWGNLLGKEGSKRGTMKQN
Sbjct: 241 QHGGGLTVWVVVKALESQLQREDVDLRDGQCHLHRRLEAPAWGNLLGKEGSKRGTMKQN 299
>gi|169213267 PREDICTED: hypothetical protein LOC100128682 [Homo
sapiens]
Length = 299
Score = 638 bits (1645), Expect = 0.0
Identities = 299/299 (100%), Positives = 299/299 (100%)
Query: 1 MPEGSVSAMRTSPKSSWPWCCSWSCAWSSSSPPWRSPPSATGTLCRSCSLAPSGDLEVLK 60
MPEGSVSAMRTSPKSSWPWCCSWSCAWSSSSPPWRSPPSATGTLCRSCSLAPSGDLEVLK
Sbjct: 1 MPEGSVSAMRTSPKSSWPWCCSWSCAWSSSSPPWRSPPSATGTLCRSCSLAPSGDLEVLK 60
Query: 61 SQETGCRDPLQLPGLLGPCALSPMVGSPSGRVKLVGRRSVVQCSRCCIDPLIFFVFVFIL 120
SQETGCRDPLQLPGLLGPCALSPMVGSPSGRVKLVGRRSVVQCSRCCIDPLIFFVFVFIL
Sbjct: 61 SQETGCRDPLQLPGLLGPCALSPMVGSPSGRVKLVGRRSVVQCSRCCIDPLIFFVFVFIL 120
Query: 121 FCFVFEMESCSVTQAGVQWCDDLGSLQPPPPGFSCLSLPGSWDYRHPPPHPANFCIFSRD 180
FCFVFEMESCSVTQAGVQWCDDLGSLQPPPPGFSCLSLPGSWDYRHPPPHPANFCIFSRD
Sbjct: 121 FCFVFEMESCSVTQAGVQWCDDLGSLQPPPPGFSCLSLPGSWDYRHPPPHPANFCIFSRD 180
Query: 181 EVSTPTQAGVKLLTASDLPTLASQSVAITGVSHHAQPNPLIFCFSSSTVRKAFDRGPRRW 240
EVSTPTQAGVKLLTASDLPTLASQSVAITGVSHHAQPNPLIFCFSSSTVRKAFDRGPRRW
Sbjct: 181 EVSTPTQAGVKLLTASDLPTLASQSVAITGVSHHAQPNPLIFCFSSSTVRKAFDRGPRRW 240
Query: 241 QHGGGLTVWVVVKALESQLQREDVDLRDGQCHLHRRLEAPAWGNLLGKEGSKRGTMKQN 299
QHGGGLTVWVVVKALESQLQREDVDLRDGQCHLHRRLEAPAWGNLLGKEGSKRGTMKQN
Sbjct: 241 QHGGGLTVWVVVKALESQLQREDVDLRDGQCHLHRRLEAPAWGNLLGKEGSKRGTMKQN 299
>gi|169216486 PREDICTED: hCG_1742852 [Homo sapiens]
Length = 402
Score = 107 bits (266), Expect = 2e-23
Identities = 57/104 (54%), Positives = 65/104 (62%), Gaps = 4/104 (3%)
Query: 117 VFILFCFVFEMESCSVTQAGVQWCDDLGSLQPPPPGF---SCLSLPGSWDYRHPPPHPAN 173
VF+LFCF+ QAGV+ C DL SLQP PPGF SCLSLP SWDY H P PAN
Sbjct: 291 VFVLFCFLLRRSFALAPQAGVR-CRDLDSLQPLPPGFKRFSCLSLPSSWDYSHAPSRPAN 349
Query: 174 FCIFSRDEVSTPTQAGVKLLTASDLPTLASQSVAITGVSHHAQP 217
F + QAG++LL + D PT ASQS ITGVSH A+P
Sbjct: 350 FVVLVETVFLHVDQAGLELLISGDPPTSASQSAGITGVSHWARP 393
>gi|169216528 PREDICTED: hCG_1742852 [Homo sapiens]
Length = 402
Score = 107 bits (266), Expect = 2e-23
Identities = 57/104 (54%), Positives = 65/104 (62%), Gaps = 4/104 (3%)
Query: 117 VFILFCFVFEMESCSVTQAGVQWCDDLGSLQPPPPGF---SCLSLPGSWDYRHPPPHPAN 173
VF+LFCF+ QAGV+ C DL SLQP PPGF SCLSLP SWDY H P PAN
Sbjct: 291 VFVLFCFLLRRSFALAPQAGVR-CRDLDSLQPLPPGFKRFSCLSLPSSWDYSHAPSRPAN 349
Query: 174 FCIFSRDEVSTPTQAGVKLLTASDLPTLASQSVAITGVSHHAQP 217
F + QAG++LL + D PT ASQS ITGVSH A+P
Sbjct: 350 FVVLVETVFLHVDQAGLELLISGDPPTSASQSAGITGVSHWARP 393
>gi|239747074 PREDICTED: hypothetical protein XP_002343911 [Homo
sapiens]
Length = 402
Score = 103 bits (256), Expect = 2e-22
Identities = 55/104 (52%), Positives = 64/104 (61%), Gaps = 4/104 (3%)
Query: 117 VFILFCFVFEMESCSVTQAGVQWCDDLGSLQPPPPGF---SCLSLPGSWDYRHPPPHPAN 173
VF+LFCF+ QAGV+ C DL SLQP PPGF SCLSLP SW Y H P PAN
Sbjct: 291 VFVLFCFLLRRSFALAPQAGVR-CRDLDSLQPLPPGFKRFSCLSLPSSWGYSHAPSRPAN 349
Query: 174 FCIFSRDEVSTPTQAGVKLLTASDLPTLASQSVAITGVSHHAQP 217
F + QAG++LL + D PT ASQS ITGV+H A+P
Sbjct: 350 FVVLVETVFLHVDQAGLELLISGDPPTSASQSAGITGVTHWARP 393
>gi|169216761 PREDICTED: hCG_1742852 [Homo sapiens]
Length = 402
Score = 103 bits (256), Expect = 2e-22
Identities = 55/104 (52%), Positives = 64/104 (61%), Gaps = 4/104 (3%)
Query: 117 VFILFCFVFEMESCSVTQAGVQWCDDLGSLQPPPPGF---SCLSLPGSWDYRHPPPHPAN 173
VF+LFCF+ QAGV+ C DL SLQP PPGF SCLSLP SW Y H P PAN
Sbjct: 291 VFVLFCFLLRRSFALAPQAGVR-CRDLDSLQPLPPGFKRFSCLSLPSSWGYSHAPSRPAN 349
Query: 174 FCIFSRDEVSTPTQAGVKLLTASDLPTLASQSVAITGVSHHAQP 217
F + QAG++LL + D PT ASQS ITGV+H A+P
Sbjct: 350 FVVLVETVFLHVDQAGLELLISGDPPTSASQSAGITGVTHWARP 393
>gi|33188429 tetratricopeptide repeat protein isoform 1 [Homo sapiens]
Length = 1079
Score = 95.5 bits (236), Expect = 5e-20
Identities = 51/86 (59%), Positives = 58/86 (67%), Gaps = 4/86 (4%)
Query: 134 QAGVQWCDDLGSLQPPPPGF---SCLSLPGSWDYRHPPPHPANFCIFSRDEVSTPTQAGV 190
+AG+QWCD L SLQPPPPGF S LSLP SW+YRH P P NFCIF QA +
Sbjct: 995 RAGMQWCD-LSSLQPPPPGFKRFSHLSLPNSWNYRHLPSCPTNFCIFVETGFHHVGQACL 1053
Query: 191 KLLTASDLPTLASQSVAITGVSHHAQ 216
+LLT+ L ASQS ITGVSHHA+
Sbjct: 1054 ELLTSGGLLASASQSAGITGVSHHAR 1079
>gi|148664240 hypothetical protein LOC146556 isoform 1 [Homo
sapiens]
Length = 440
Score = 79.3 bits (194), Expect = 4e-15
Identities = 47/85 (55%), Positives = 55/85 (64%), Gaps = 5/85 (5%)
Query: 128 ESCSVTQAGVQWCDDLGSLQPPPPGF---SCLSLPGSWDYRHPPPHPANFCIFSRDE-VS 183
+S SV QAGVQW +LGSLQP PPGF SCL LP SWDYR PP+ ANF IF +
Sbjct: 357 DSRSVAQAGVQW-RNLGSLQPLPPGFKQFSCLILPSSWDYRSVPPYLANFYIFLVETGFH 415
Query: 184 TPTQAGVKLLTASDLPTLASQSVAI 208
AG++LL + D PT SQSV +
Sbjct: 416 HVAHAGLELLISRDPPTSGSQSVGL 440
>gi|228480284 Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA
synthase isoform 3 [Homo sapiens]
Length = 500
Score = 69.3 bits (168), Expect = 4e-12
Identities = 29/35 (82%), Positives = 30/35 (85%), Gaps = 3/35 (8%)
Query: 140 CDDLGSLQPPPPGFS---CLSLPGSWDYRHPPPHP 171
CDDLGSLQPPPPGF+ CLSLP SWDYR PPPHP
Sbjct: 3 CDDLGSLQPPPPGFTPFACLSLPSSWDYRRPPPHP 37
>gi|149588643 zinc finger protein 283 [Homo sapiens]
Length = 679
Score = 61.6 bits (148), Expect = 8e-10
Identities = 32/41 (78%), Positives = 32/41 (78%), Gaps = 4/41 (9%)
Query: 127 MESCSVTQAGVQWCDDLGSLQPPPPG---FSCLSLPGSWDY 164
MES SV QAGVQWC DLGSLQ PPPG FSCLSL SWDY
Sbjct: 1 MESRSVAQAGVQWC-DLGSLQAPPPGFTLFSCLSLLSSWDY 40
>gi|14277126 peptidylprolyl isomerase-like 3 isoform PPIL3a [Homo
sapiens]
Length = 165
Score = 51.6 bits (122), Expect = 8e-07
Identities = 28/37 (75%), Positives = 28/37 (75%), Gaps = 4/37 (10%)
Query: 126 EMESCSVTQAGVQWCDDLGSLQPPPPGFS---CLSLP 159
EMES V QAGVQW DLGSLQPPPPGF CLSLP
Sbjct: 26 EMESRCVPQAGVQW-RDLGSLQPPPPGFKQVFCLSLP 61
>gi|237858668 hypothetical protein LOC123207 isoform d [Homo
sapiens]
Length = 167
Score = 48.5 bits (114), Expect = 7e-06
Identities = 23/35 (65%), Positives = 27/35 (77%)
Query: 187 QAGVKLLTASDLPTLASQSVAITGVSHHAQPNPLI 221
QAG++LL +SDLP ASQS ITGVSHH QP L+
Sbjct: 130 QAGLELLASSDLPASASQSAGITGVSHHTQPALLL 164
>gi|193794843 BEN domain containing 2 [Homo sapiens]
Length = 799
Score = 48.5 bits (114), Expect = 7e-06
Identities = 29/46 (63%), Positives = 29/46 (63%), Gaps = 4/46 (8%)
Query: 129 SCSVTQAGVQWCDDLGSLQPPPPG---FSCLSLPGSWDYRHPPPHP 171
S SVTQAGVQW D SLQP P G F LSLP SWD R PP P
Sbjct: 81 SGSVTQAGVQWHDH-SSLQPQPLGLKQFFHLSLPSSWDDRRTPPCP 125
>gi|19743817 integrin beta 1 isoform 1C-1 precursor [Homo sapiens]
Length = 825
Score = 48.1 bits (113), Expect = 9e-06
Identities = 25/40 (62%), Positives = 27/40 (67%), Gaps = 4/40 (10%)
Query: 129 SCSVTQAGVQWCDDLGSLQPPPPGF---SCLSLPGSWDYR 165
S SV Q GVQWCD + SLQP F SCLSLP +WDYR
Sbjct: 778 SLSVAQPGVQWCD-ISSLQPLTSRFQQFSCLSLPSTWDYR 816
>gi|238908517 colony stimulating factor 2 receptor alpha chain
isoform f precursor [Homo sapiens]
Length = 434
Score = 47.8 bits (112), Expect = 1e-05
Identities = 28/41 (68%), Positives = 29/41 (70%), Gaps = 4/41 (9%)
Query: 126 EMESCSVTQAGVQWCDDLGSLQPPPP---GFSCLSLPGSWD 163
E S SVTQAGVQW +LGSLQPP P FSCL LPGS D
Sbjct: 314 EFGSHSVTQAGVQW-HNLGSLQPPSPRLKRFSCLRLPGSDD 353
>gi|40789270 zinc finger protein 573 [Homo sapiens]
Length = 607
Score = 47.8 bits (112), Expect = 1e-05
Identities = 26/35 (74%), Positives = 26/35 (74%), Gaps = 4/35 (11%)
Query: 127 MESCSVTQAGVQWCDDLGSLQPPPP---GFSCLSL 158
MESCSV QAGVQW DL SLQPPPP FSC SL
Sbjct: 1 MESCSVAQAGVQW-PDLSSLQPPPPRFKQFSCHSL 34
>gi|62243734 signal transducing adaptor family member 2 isoform 1
[Homo sapiens]
Length = 449
Score = 47.4 bits (111), Expect = 2e-05
Identities = 27/50 (54%), Positives = 32/50 (64%), Gaps = 5/50 (10%)
Query: 187 QAGVKLLTASDLPTLASQSVAITGVSHHAQPNPLIFCFSSSTVRKAFDRG 236
QAG++LLT+SD PT ASQS ITGVSHH P+ SS K F+ G
Sbjct: 367 QAGLELLTSSDPPTSASQSAGITGVSHHTWPH-----LSSLPEPKVFNGG 411
>gi|205830426 solute carrier family 39 (zinc transporter), member 14
isoform c [Homo sapiens]
Length = 481
Score = 46.2 bits (108), Expect = 3e-05
Identities = 26/48 (54%), Positives = 29/48 (60%), Gaps = 4/48 (8%)
Query: 117 VFILFCFVFEMESCSVTQAGVQWCDDLGSLQPPPPG---FSCLSLPGS 161
+F+ ME CSV QAGVQWC L SLQP P G SCLSLP +
Sbjct: 435 MFLYISLADMMEFCSVAQAGVQWC-HLSSLQPLPLGLKRLSCLSLPSN 481
>gi|121583542 mitogen-activated protein kinase kinase kinase 15
[Homo sapiens]
Length = 788
Score = 45.8 bits (107), Expect = 5e-05
Identities = 24/34 (70%), Positives = 25/34 (73%), Gaps = 4/34 (11%)
Query: 134 QAGVQWCDDLGSLQPPPPGF---SCLSLPGSWDY 164
+AGVQW DLGSLQP PP F SCLSL SWDY
Sbjct: 25 KAGVQW-HDLGSLQPLPPRFKRFSCLSLQSSWDY 57
>gi|169213800 PREDICTED: hypothetical protein [Homo sapiens]
Length = 142
Score = 43.5 bits (101), Expect = 2e-04
Identities = 21/30 (70%), Positives = 25/30 (83%)
Query: 187 QAGVKLLTASDLPTLASQSVAITGVSHHAQ 216
QAG++LLT+SD PT ASQ+ ITGVSH AQ
Sbjct: 8 QAGLELLTSSDPPTSASQNAEITGVSHRAQ 37
>gi|169214229 PREDICTED: hypothetical protein [Homo sapiens]
Length = 142
Score = 43.5 bits (101), Expect = 2e-04
Identities = 21/30 (70%), Positives = 25/30 (83%)
Query: 187 QAGVKLLTASDLPTLASQSVAITGVSHHAQ 216
QAG++LLT+SD PT ASQ+ ITGVSH AQ
Sbjct: 8 QAGLELLTSSDPPTSASQNAEITGVSHRAQ 37
>gi|169213573 PREDICTED: hypothetical protein [Homo sapiens]
Length = 142
Score = 43.5 bits (101), Expect = 2e-04
Identities = 21/30 (70%), Positives = 25/30 (83%)
Query: 187 QAGVKLLTASDLPTLASQSVAITGVSHHAQ 216
QAG++LLT+SD PT ASQ+ ITGVSH AQ
Sbjct: 8 QAGLELLTSSDPPTSASQNAEITGVSHRAQ 37
>gi|194473995 zinc finger protein 195 isoform 2 [Homo sapiens]
Length = 606
Score = 43.1 bits (100), Expect = 3e-04
Identities = 21/32 (65%), Positives = 25/32 (78%)
Query: 186 TQAGVKLLTASDLPTLASQSVAITGVSHHAQP 217
TQA ++LL +SDLP ASQS ITGV+H AQP
Sbjct: 83 TQACLELLGSSDLPASASQSAGITGVNHRAQP 114
>gi|194473688 zinc finger protein 195 isoform 1 [Homo sapiens]
Length = 629
Score = 43.1 bits (100), Expect = 3e-04
Identities = 21/32 (65%), Positives = 25/32 (78%)
Query: 186 TQAGVKLLTASDLPTLASQSVAITGVSHHAQP 217
TQA ++LL +SDLP ASQS ITGV+H AQP
Sbjct: 83 TQACLELLGSSDLPASASQSAGITGVNHRAQP 114
>gi|19743821 integrin beta 1 isoform 1C-2 precursor [Homo sapiens]
Length = 819
Score = 42.4 bits (98), Expect = 5e-04
Identities = 21/33 (63%), Positives = 23/33 (69%), Gaps = 4/33 (12%)
Query: 136 GVQWCDDLGSLQPPPPGF---SCLSLPGSWDYR 165
GVQWCD + SLQP F SCLSLP +WDYR
Sbjct: 779 GVQWCD-ISSLQPLTSRFQQFSCLSLPSTWDYR 810
>gi|15718702 caspase 7 isoform beta [Homo sapiens]
Length = 253
Score = 41.2 bits (95), Expect = 0.001
Identities = 21/25 (84%), Positives = 21/25 (84%), Gaps = 1/25 (4%)
Query: 127 MESCSVTQAGVQWCDDLGSLQPPPP 151
MESCSVTQAGVQ DLG LQPPPP
Sbjct: 149 MESCSVTQAGVQ-RRDLGRLQPPPP 172
>gi|63999355 chromosome 9 open reading frame 37 [Homo sapiens]
Length = 176
Score = 41.2 bits (95), Expect = 0.001
Identities = 20/36 (55%), Positives = 26/36 (72%)
Query: 187 QAGVKLLTASDLPTLASQSVAITGVSHHAQPNPLIF 222
QA ++LLT+S+ P ASQS ITG SH A+P P+ F
Sbjct: 8 QADLELLTSSNPPASASQSTGITGGSHRARPGPVHF 43
>gi|59933284 RUN domain containing 2B [Homo sapiens]
Length = 249
Score = 40.8 bits (94), Expect = 0.001
Identities = 20/23 (86%), Positives = 20/23 (86%), Gaps = 1/23 (4%)
Query: 131 SVTQAGVQWCDDLGSLQPPPPGF 153
SVTQAGVQW DLGSLQP PPGF
Sbjct: 227 SVTQAGVQW-HDLGSLQPLPPGF 248
>gi|28212280 hypothetical protein LOC283579 [Homo sapiens]
Length = 122
Score = 38.9 bits (89), Expect = 0.006
Identities = 23/47 (48%), Positives = 29/47 (61%), Gaps = 5/47 (10%)
Query: 187 QAGVKLLTASDLPTLASQSVAITGVSHHAQP-----NPLIFCFSSST 228
QAG++LL +S+ P ASQS ITGVSH A+P N +F ST
Sbjct: 38 QAGLELLGSSNPPASASQSAGITGVSHCARPGEHDLNHTVFQVKDST 84
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.135 0.459
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,202,482
Number of Sequences: 37866
Number of extensions: 838287
Number of successful extensions: 2812
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 75
Number of HSP's that attempted gapping in prelim test: 2668
Number of HSP's gapped (non-prelim): 179
length of query: 299
length of database: 18,247,518
effective HSP length: 102
effective length of query: 197
effective length of database: 14,385,186
effective search space: 2833881642
effective search space used: 2833881642
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.