Guide to the Human Genome
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Search of human proteins with 169213267

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|169213267 PREDICTED: hypothetical protein LOC100128682 [Homo
sapiens]
         (299 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169213867 PREDICTED: hypothetical protein LOC100128682 [Homo ...   638   0.0  
gi|169214305 PREDICTED: hypothetical protein LOC100128682 [Homo ...   638   0.0  
gi|169213267 PREDICTED: hypothetical protein LOC100128682 [Homo ...   638   0.0  
gi|169216486 PREDICTED: hCG_1742852 [Homo sapiens]                    107   2e-23
gi|169216528 PREDICTED: hCG_1742852 [Homo sapiens]                    107   2e-23
gi|239747074 PREDICTED: hypothetical protein XP_002343911 [Homo ...   103   2e-22
gi|169216761 PREDICTED: hCG_1742852 [Homo sapiens]                    103   2e-22
gi|33188429 tetratricopeptide repeat protein isoform 1 [Homo sap...    96   5e-20
gi|148664240 hypothetical protein LOC146556 isoform 1 [Homo sapi...    79   4e-15
gi|228480284 Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRN...    69   4e-12
gi|149588643 zinc finger protein 283 [Homo sapiens]                    62   8e-10
gi|14277126 peptidylprolyl isomerase-like 3 isoform PPIL3a [Homo...    52   8e-07
gi|237858668 hypothetical protein LOC123207 isoform d [Homo sapi...    49   7e-06
gi|193794843 BEN domain containing 2 [Homo sapiens]                    49   7e-06
gi|19743817 integrin beta 1 isoform 1C-1 precursor [Homo sapiens]      48   9e-06
gi|238908517 colony stimulating factor 2 receptor alpha chain is...    48   1e-05
gi|40789270 zinc finger protein 573 [Homo sapiens]                     48   1e-05
gi|62243734 signal transducing adaptor family member 2 isoform 1...    47   2e-05
gi|205830426 solute carrier family 39 (zinc transporter), member...    46   3e-05
gi|121583542 mitogen-activated protein kinase kinase kinase 15 [...    46   5e-05
gi|169213800 PREDICTED: hypothetical protein [Homo sapiens]            44   2e-04
gi|169214229 PREDICTED: hypothetical protein [Homo sapiens]            44   2e-04
gi|169213573 PREDICTED: hypothetical protein [Homo sapiens]            44   2e-04
gi|194473995 zinc finger protein 195 isoform 2 [Homo sapiens]          43   3e-04
gi|194473688 zinc finger protein 195 isoform 1 [Homo sapiens]          43   3e-04
gi|19743821 integrin beta 1 isoform 1C-2 precursor [Homo sapiens]      42   5e-04
gi|15718702 caspase 7 isoform beta [Homo sapiens]                      41   0.001
gi|63999355 chromosome 9 open reading frame 37 [Homo sapiens]          41   0.001
gi|59933284 RUN domain containing 2B [Homo sapiens]                    41   0.001
gi|28212280 hypothetical protein LOC283579 [Homo sapiens]              39   0.006

>gi|169213867 PREDICTED: hypothetical protein LOC100128682 [Homo
           sapiens]
          Length = 299

 Score =  638 bits (1645), Expect = 0.0
 Identities = 299/299 (100%), Positives = 299/299 (100%)

Query: 1   MPEGSVSAMRTSPKSSWPWCCSWSCAWSSSSPPWRSPPSATGTLCRSCSLAPSGDLEVLK 60
           MPEGSVSAMRTSPKSSWPWCCSWSCAWSSSSPPWRSPPSATGTLCRSCSLAPSGDLEVLK
Sbjct: 1   MPEGSVSAMRTSPKSSWPWCCSWSCAWSSSSPPWRSPPSATGTLCRSCSLAPSGDLEVLK 60

Query: 61  SQETGCRDPLQLPGLLGPCALSPMVGSPSGRVKLVGRRSVVQCSRCCIDPLIFFVFVFIL 120
           SQETGCRDPLQLPGLLGPCALSPMVGSPSGRVKLVGRRSVVQCSRCCIDPLIFFVFVFIL
Sbjct: 61  SQETGCRDPLQLPGLLGPCALSPMVGSPSGRVKLVGRRSVVQCSRCCIDPLIFFVFVFIL 120

Query: 121 FCFVFEMESCSVTQAGVQWCDDLGSLQPPPPGFSCLSLPGSWDYRHPPPHPANFCIFSRD 180
           FCFVFEMESCSVTQAGVQWCDDLGSLQPPPPGFSCLSLPGSWDYRHPPPHPANFCIFSRD
Sbjct: 121 FCFVFEMESCSVTQAGVQWCDDLGSLQPPPPGFSCLSLPGSWDYRHPPPHPANFCIFSRD 180

Query: 181 EVSTPTQAGVKLLTASDLPTLASQSVAITGVSHHAQPNPLIFCFSSSTVRKAFDRGPRRW 240
           EVSTPTQAGVKLLTASDLPTLASQSVAITGVSHHAQPNPLIFCFSSSTVRKAFDRGPRRW
Sbjct: 181 EVSTPTQAGVKLLTASDLPTLASQSVAITGVSHHAQPNPLIFCFSSSTVRKAFDRGPRRW 240

Query: 241 QHGGGLTVWVVVKALESQLQREDVDLRDGQCHLHRRLEAPAWGNLLGKEGSKRGTMKQN 299
           QHGGGLTVWVVVKALESQLQREDVDLRDGQCHLHRRLEAPAWGNLLGKEGSKRGTMKQN
Sbjct: 241 QHGGGLTVWVVVKALESQLQREDVDLRDGQCHLHRRLEAPAWGNLLGKEGSKRGTMKQN 299


>gi|169214305 PREDICTED: hypothetical protein LOC100128682 [Homo
           sapiens]
          Length = 299

 Score =  638 bits (1645), Expect = 0.0
 Identities = 299/299 (100%), Positives = 299/299 (100%)

Query: 1   MPEGSVSAMRTSPKSSWPWCCSWSCAWSSSSPPWRSPPSATGTLCRSCSLAPSGDLEVLK 60
           MPEGSVSAMRTSPKSSWPWCCSWSCAWSSSSPPWRSPPSATGTLCRSCSLAPSGDLEVLK
Sbjct: 1   MPEGSVSAMRTSPKSSWPWCCSWSCAWSSSSPPWRSPPSATGTLCRSCSLAPSGDLEVLK 60

Query: 61  SQETGCRDPLQLPGLLGPCALSPMVGSPSGRVKLVGRRSVVQCSRCCIDPLIFFVFVFIL 120
           SQETGCRDPLQLPGLLGPCALSPMVGSPSGRVKLVGRRSVVQCSRCCIDPLIFFVFVFIL
Sbjct: 61  SQETGCRDPLQLPGLLGPCALSPMVGSPSGRVKLVGRRSVVQCSRCCIDPLIFFVFVFIL 120

Query: 121 FCFVFEMESCSVTQAGVQWCDDLGSLQPPPPGFSCLSLPGSWDYRHPPPHPANFCIFSRD 180
           FCFVFEMESCSVTQAGVQWCDDLGSLQPPPPGFSCLSLPGSWDYRHPPPHPANFCIFSRD
Sbjct: 121 FCFVFEMESCSVTQAGVQWCDDLGSLQPPPPGFSCLSLPGSWDYRHPPPHPANFCIFSRD 180

Query: 181 EVSTPTQAGVKLLTASDLPTLASQSVAITGVSHHAQPNPLIFCFSSSTVRKAFDRGPRRW 240
           EVSTPTQAGVKLLTASDLPTLASQSVAITGVSHHAQPNPLIFCFSSSTVRKAFDRGPRRW
Sbjct: 181 EVSTPTQAGVKLLTASDLPTLASQSVAITGVSHHAQPNPLIFCFSSSTVRKAFDRGPRRW 240

Query: 241 QHGGGLTVWVVVKALESQLQREDVDLRDGQCHLHRRLEAPAWGNLLGKEGSKRGTMKQN 299
           QHGGGLTVWVVVKALESQLQREDVDLRDGQCHLHRRLEAPAWGNLLGKEGSKRGTMKQN
Sbjct: 241 QHGGGLTVWVVVKALESQLQREDVDLRDGQCHLHRRLEAPAWGNLLGKEGSKRGTMKQN 299


>gi|169213267 PREDICTED: hypothetical protein LOC100128682 [Homo
           sapiens]
          Length = 299

 Score =  638 bits (1645), Expect = 0.0
 Identities = 299/299 (100%), Positives = 299/299 (100%)

Query: 1   MPEGSVSAMRTSPKSSWPWCCSWSCAWSSSSPPWRSPPSATGTLCRSCSLAPSGDLEVLK 60
           MPEGSVSAMRTSPKSSWPWCCSWSCAWSSSSPPWRSPPSATGTLCRSCSLAPSGDLEVLK
Sbjct: 1   MPEGSVSAMRTSPKSSWPWCCSWSCAWSSSSPPWRSPPSATGTLCRSCSLAPSGDLEVLK 60

Query: 61  SQETGCRDPLQLPGLLGPCALSPMVGSPSGRVKLVGRRSVVQCSRCCIDPLIFFVFVFIL 120
           SQETGCRDPLQLPGLLGPCALSPMVGSPSGRVKLVGRRSVVQCSRCCIDPLIFFVFVFIL
Sbjct: 61  SQETGCRDPLQLPGLLGPCALSPMVGSPSGRVKLVGRRSVVQCSRCCIDPLIFFVFVFIL 120

Query: 121 FCFVFEMESCSVTQAGVQWCDDLGSLQPPPPGFSCLSLPGSWDYRHPPPHPANFCIFSRD 180
           FCFVFEMESCSVTQAGVQWCDDLGSLQPPPPGFSCLSLPGSWDYRHPPPHPANFCIFSRD
Sbjct: 121 FCFVFEMESCSVTQAGVQWCDDLGSLQPPPPGFSCLSLPGSWDYRHPPPHPANFCIFSRD 180

Query: 181 EVSTPTQAGVKLLTASDLPTLASQSVAITGVSHHAQPNPLIFCFSSSTVRKAFDRGPRRW 240
           EVSTPTQAGVKLLTASDLPTLASQSVAITGVSHHAQPNPLIFCFSSSTVRKAFDRGPRRW
Sbjct: 181 EVSTPTQAGVKLLTASDLPTLASQSVAITGVSHHAQPNPLIFCFSSSTVRKAFDRGPRRW 240

Query: 241 QHGGGLTVWVVVKALESQLQREDVDLRDGQCHLHRRLEAPAWGNLLGKEGSKRGTMKQN 299
           QHGGGLTVWVVVKALESQLQREDVDLRDGQCHLHRRLEAPAWGNLLGKEGSKRGTMKQN
Sbjct: 241 QHGGGLTVWVVVKALESQLQREDVDLRDGQCHLHRRLEAPAWGNLLGKEGSKRGTMKQN 299


>gi|169216486 PREDICTED: hCG_1742852 [Homo sapiens]
          Length = 402

 Score =  107 bits (266), Expect = 2e-23
 Identities = 57/104 (54%), Positives = 65/104 (62%), Gaps = 4/104 (3%)

Query: 117 VFILFCFVFEMESCSVTQAGVQWCDDLGSLQPPPPGF---SCLSLPGSWDYRHPPPHPAN 173
           VF+LFCF+         QAGV+ C DL SLQP PPGF   SCLSLP SWDY H P  PAN
Sbjct: 291 VFVLFCFLLRRSFALAPQAGVR-CRDLDSLQPLPPGFKRFSCLSLPSSWDYSHAPSRPAN 349

Query: 174 FCIFSRDEVSTPTQAGVKLLTASDLPTLASQSVAITGVSHHAQP 217
           F +          QAG++LL + D PT ASQS  ITGVSH A+P
Sbjct: 350 FVVLVETVFLHVDQAGLELLISGDPPTSASQSAGITGVSHWARP 393


>gi|169216528 PREDICTED: hCG_1742852 [Homo sapiens]
          Length = 402

 Score =  107 bits (266), Expect = 2e-23
 Identities = 57/104 (54%), Positives = 65/104 (62%), Gaps = 4/104 (3%)

Query: 117 VFILFCFVFEMESCSVTQAGVQWCDDLGSLQPPPPGF---SCLSLPGSWDYRHPPPHPAN 173
           VF+LFCF+         QAGV+ C DL SLQP PPGF   SCLSLP SWDY H P  PAN
Sbjct: 291 VFVLFCFLLRRSFALAPQAGVR-CRDLDSLQPLPPGFKRFSCLSLPSSWDYSHAPSRPAN 349

Query: 174 FCIFSRDEVSTPTQAGVKLLTASDLPTLASQSVAITGVSHHAQP 217
           F +          QAG++LL + D PT ASQS  ITGVSH A+P
Sbjct: 350 FVVLVETVFLHVDQAGLELLISGDPPTSASQSAGITGVSHWARP 393


>gi|239747074 PREDICTED: hypothetical protein XP_002343911 [Homo
           sapiens]
          Length = 402

 Score =  103 bits (256), Expect = 2e-22
 Identities = 55/104 (52%), Positives = 64/104 (61%), Gaps = 4/104 (3%)

Query: 117 VFILFCFVFEMESCSVTQAGVQWCDDLGSLQPPPPGF---SCLSLPGSWDYRHPPPHPAN 173
           VF+LFCF+         QAGV+ C DL SLQP PPGF   SCLSLP SW Y H P  PAN
Sbjct: 291 VFVLFCFLLRRSFALAPQAGVR-CRDLDSLQPLPPGFKRFSCLSLPSSWGYSHAPSRPAN 349

Query: 174 FCIFSRDEVSTPTQAGVKLLTASDLPTLASQSVAITGVSHHAQP 217
           F +          QAG++LL + D PT ASQS  ITGV+H A+P
Sbjct: 350 FVVLVETVFLHVDQAGLELLISGDPPTSASQSAGITGVTHWARP 393


>gi|169216761 PREDICTED: hCG_1742852 [Homo sapiens]
          Length = 402

 Score =  103 bits (256), Expect = 2e-22
 Identities = 55/104 (52%), Positives = 64/104 (61%), Gaps = 4/104 (3%)

Query: 117 VFILFCFVFEMESCSVTQAGVQWCDDLGSLQPPPPGF---SCLSLPGSWDYRHPPPHPAN 173
           VF+LFCF+         QAGV+ C DL SLQP PPGF   SCLSLP SW Y H P  PAN
Sbjct: 291 VFVLFCFLLRRSFALAPQAGVR-CRDLDSLQPLPPGFKRFSCLSLPSSWGYSHAPSRPAN 349

Query: 174 FCIFSRDEVSTPTQAGVKLLTASDLPTLASQSVAITGVSHHAQP 217
           F +          QAG++LL + D PT ASQS  ITGV+H A+P
Sbjct: 350 FVVLVETVFLHVDQAGLELLISGDPPTSASQSAGITGVTHWARP 393


>gi|33188429 tetratricopeptide repeat protein isoform 1 [Homo sapiens]
          Length = 1079

 Score = 95.5 bits (236), Expect = 5e-20
 Identities = 51/86 (59%), Positives = 58/86 (67%), Gaps = 4/86 (4%)

Query: 134  QAGVQWCDDLGSLQPPPPGF---SCLSLPGSWDYRHPPPHPANFCIFSRDEVSTPTQAGV 190
            +AG+QWCD L SLQPPPPGF   S LSLP SW+YRH P  P NFCIF         QA +
Sbjct: 995  RAGMQWCD-LSSLQPPPPGFKRFSHLSLPNSWNYRHLPSCPTNFCIFVETGFHHVGQACL 1053

Query: 191  KLLTASDLPTLASQSVAITGVSHHAQ 216
            +LLT+  L   ASQS  ITGVSHHA+
Sbjct: 1054 ELLTSGGLLASASQSAGITGVSHHAR 1079


>gi|148664240 hypothetical protein LOC146556 isoform 1 [Homo
           sapiens]
          Length = 440

 Score = 79.3 bits (194), Expect = 4e-15
 Identities = 47/85 (55%), Positives = 55/85 (64%), Gaps = 5/85 (5%)

Query: 128 ESCSVTQAGVQWCDDLGSLQPPPPGF---SCLSLPGSWDYRHPPPHPANFCIFSRDE-VS 183
           +S SV QAGVQW  +LGSLQP PPGF   SCL LP SWDYR  PP+ ANF IF  +    
Sbjct: 357 DSRSVAQAGVQW-RNLGSLQPLPPGFKQFSCLILPSSWDYRSVPPYLANFYIFLVETGFH 415

Query: 184 TPTQAGVKLLTASDLPTLASQSVAI 208
               AG++LL + D PT  SQSV +
Sbjct: 416 HVAHAGLELLISRDPPTSGSQSVGL 440


>gi|228480284 Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA
           synthase isoform 3 [Homo sapiens]
          Length = 500

 Score = 69.3 bits (168), Expect = 4e-12
 Identities = 29/35 (82%), Positives = 30/35 (85%), Gaps = 3/35 (8%)

Query: 140 CDDLGSLQPPPPGFS---CLSLPGSWDYRHPPPHP 171
           CDDLGSLQPPPPGF+   CLSLP SWDYR PPPHP
Sbjct: 3   CDDLGSLQPPPPGFTPFACLSLPSSWDYRRPPPHP 37


>gi|149588643 zinc finger protein 283 [Homo sapiens]
          Length = 679

 Score = 61.6 bits (148), Expect = 8e-10
 Identities = 32/41 (78%), Positives = 32/41 (78%), Gaps = 4/41 (9%)

Query: 127 MESCSVTQAGVQWCDDLGSLQPPPPG---FSCLSLPGSWDY 164
           MES SV QAGVQWC DLGSLQ PPPG   FSCLSL  SWDY
Sbjct: 1   MESRSVAQAGVQWC-DLGSLQAPPPGFTLFSCLSLLSSWDY 40


>gi|14277126 peptidylprolyl isomerase-like 3 isoform PPIL3a [Homo
           sapiens]
          Length = 165

 Score = 51.6 bits (122), Expect = 8e-07
 Identities = 28/37 (75%), Positives = 28/37 (75%), Gaps = 4/37 (10%)

Query: 126 EMESCSVTQAGVQWCDDLGSLQPPPPGFS---CLSLP 159
           EMES  V QAGVQW  DLGSLQPPPPGF    CLSLP
Sbjct: 26  EMESRCVPQAGVQW-RDLGSLQPPPPGFKQVFCLSLP 61


>gi|237858668 hypothetical protein LOC123207 isoform d [Homo
           sapiens]
          Length = 167

 Score = 48.5 bits (114), Expect = 7e-06
 Identities = 23/35 (65%), Positives = 27/35 (77%)

Query: 187 QAGVKLLTASDLPTLASQSVAITGVSHHAQPNPLI 221
           QAG++LL +SDLP  ASQS  ITGVSHH QP  L+
Sbjct: 130 QAGLELLASSDLPASASQSAGITGVSHHTQPALLL 164


>gi|193794843 BEN domain containing 2 [Homo sapiens]
          Length = 799

 Score = 48.5 bits (114), Expect = 7e-06
 Identities = 29/46 (63%), Positives = 29/46 (63%), Gaps = 4/46 (8%)

Query: 129 SCSVTQAGVQWCDDLGSLQPPPPG---FSCLSLPGSWDYRHPPPHP 171
           S SVTQAGVQW D   SLQP P G   F  LSLP SWD R  PP P
Sbjct: 81  SGSVTQAGVQWHDH-SSLQPQPLGLKQFFHLSLPSSWDDRRTPPCP 125


>gi|19743817 integrin beta 1 isoform 1C-1 precursor [Homo sapiens]
          Length = 825

 Score = 48.1 bits (113), Expect = 9e-06
 Identities = 25/40 (62%), Positives = 27/40 (67%), Gaps = 4/40 (10%)

Query: 129 SCSVTQAGVQWCDDLGSLQPPPPGF---SCLSLPGSWDYR 165
           S SV Q GVQWCD + SLQP    F   SCLSLP +WDYR
Sbjct: 778 SLSVAQPGVQWCD-ISSLQPLTSRFQQFSCLSLPSTWDYR 816


>gi|238908517 colony stimulating factor 2 receptor alpha chain
           isoform f precursor [Homo sapiens]
          Length = 434

 Score = 47.8 bits (112), Expect = 1e-05
 Identities = 28/41 (68%), Positives = 29/41 (70%), Gaps = 4/41 (9%)

Query: 126 EMESCSVTQAGVQWCDDLGSLQPPPP---GFSCLSLPGSWD 163
           E  S SVTQAGVQW  +LGSLQPP P    FSCL LPGS D
Sbjct: 314 EFGSHSVTQAGVQW-HNLGSLQPPSPRLKRFSCLRLPGSDD 353


>gi|40789270 zinc finger protein 573 [Homo sapiens]
          Length = 607

 Score = 47.8 bits (112), Expect = 1e-05
 Identities = 26/35 (74%), Positives = 26/35 (74%), Gaps = 4/35 (11%)

Query: 127 MESCSVTQAGVQWCDDLGSLQPPPP---GFSCLSL 158
           MESCSV QAGVQW  DL SLQPPPP    FSC SL
Sbjct: 1   MESCSVAQAGVQW-PDLSSLQPPPPRFKQFSCHSL 34


>gi|62243734 signal transducing adaptor family member 2 isoform 1
           [Homo sapiens]
          Length = 449

 Score = 47.4 bits (111), Expect = 2e-05
 Identities = 27/50 (54%), Positives = 32/50 (64%), Gaps = 5/50 (10%)

Query: 187 QAGVKLLTASDLPTLASQSVAITGVSHHAQPNPLIFCFSSSTVRKAFDRG 236
           QAG++LLT+SD PT ASQS  ITGVSHH  P+      SS    K F+ G
Sbjct: 367 QAGLELLTSSDPPTSASQSAGITGVSHHTWPH-----LSSLPEPKVFNGG 411


>gi|205830426 solute carrier family 39 (zinc transporter), member 14
           isoform c [Homo sapiens]
          Length = 481

 Score = 46.2 bits (108), Expect = 3e-05
 Identities = 26/48 (54%), Positives = 29/48 (60%), Gaps = 4/48 (8%)

Query: 117 VFILFCFVFEMESCSVTQAGVQWCDDLGSLQPPPPG---FSCLSLPGS 161
           +F+       ME CSV QAGVQWC  L SLQP P G    SCLSLP +
Sbjct: 435 MFLYISLADMMEFCSVAQAGVQWC-HLSSLQPLPLGLKRLSCLSLPSN 481


>gi|121583542 mitogen-activated protein kinase kinase kinase 15
           [Homo sapiens]
          Length = 788

 Score = 45.8 bits (107), Expect = 5e-05
 Identities = 24/34 (70%), Positives = 25/34 (73%), Gaps = 4/34 (11%)

Query: 134 QAGVQWCDDLGSLQPPPPGF---SCLSLPGSWDY 164
           +AGVQW  DLGSLQP PP F   SCLSL  SWDY
Sbjct: 25  KAGVQW-HDLGSLQPLPPRFKRFSCLSLQSSWDY 57


>gi|169213800 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 142

 Score = 43.5 bits (101), Expect = 2e-04
 Identities = 21/30 (70%), Positives = 25/30 (83%)

Query: 187 QAGVKLLTASDLPTLASQSVAITGVSHHAQ 216
           QAG++LLT+SD PT ASQ+  ITGVSH AQ
Sbjct: 8   QAGLELLTSSDPPTSASQNAEITGVSHRAQ 37


>gi|169214229 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 142

 Score = 43.5 bits (101), Expect = 2e-04
 Identities = 21/30 (70%), Positives = 25/30 (83%)

Query: 187 QAGVKLLTASDLPTLASQSVAITGVSHHAQ 216
           QAG++LLT+SD PT ASQ+  ITGVSH AQ
Sbjct: 8   QAGLELLTSSDPPTSASQNAEITGVSHRAQ 37


>gi|169213573 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 142

 Score = 43.5 bits (101), Expect = 2e-04
 Identities = 21/30 (70%), Positives = 25/30 (83%)

Query: 187 QAGVKLLTASDLPTLASQSVAITGVSHHAQ 216
           QAG++LLT+SD PT ASQ+  ITGVSH AQ
Sbjct: 8   QAGLELLTSSDPPTSASQNAEITGVSHRAQ 37


>gi|194473995 zinc finger protein 195 isoform 2 [Homo sapiens]
          Length = 606

 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 21/32 (65%), Positives = 25/32 (78%)

Query: 186 TQAGVKLLTASDLPTLASQSVAITGVSHHAQP 217
           TQA ++LL +SDLP  ASQS  ITGV+H AQP
Sbjct: 83  TQACLELLGSSDLPASASQSAGITGVNHRAQP 114


>gi|194473688 zinc finger protein 195 isoform 1 [Homo sapiens]
          Length = 629

 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 21/32 (65%), Positives = 25/32 (78%)

Query: 186 TQAGVKLLTASDLPTLASQSVAITGVSHHAQP 217
           TQA ++LL +SDLP  ASQS  ITGV+H AQP
Sbjct: 83  TQACLELLGSSDLPASASQSAGITGVNHRAQP 114


>gi|19743821 integrin beta 1 isoform 1C-2 precursor [Homo sapiens]
          Length = 819

 Score = 42.4 bits (98), Expect = 5e-04
 Identities = 21/33 (63%), Positives = 23/33 (69%), Gaps = 4/33 (12%)

Query: 136 GVQWCDDLGSLQPPPPGF---SCLSLPGSWDYR 165
           GVQWCD + SLQP    F   SCLSLP +WDYR
Sbjct: 779 GVQWCD-ISSLQPLTSRFQQFSCLSLPSTWDYR 810


>gi|15718702 caspase 7 isoform beta [Homo sapiens]
          Length = 253

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 21/25 (84%), Positives = 21/25 (84%), Gaps = 1/25 (4%)

Query: 127 MESCSVTQAGVQWCDDLGSLQPPPP 151
           MESCSVTQAGVQ   DLG LQPPPP
Sbjct: 149 MESCSVTQAGVQ-RRDLGRLQPPPP 172


>gi|63999355 chromosome 9 open reading frame 37 [Homo sapiens]
          Length = 176

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 20/36 (55%), Positives = 26/36 (72%)

Query: 187 QAGVKLLTASDLPTLASQSVAITGVSHHAQPNPLIF 222
           QA ++LLT+S+ P  ASQS  ITG SH A+P P+ F
Sbjct: 8   QADLELLTSSNPPASASQSTGITGGSHRARPGPVHF 43


>gi|59933284 RUN domain containing 2B [Homo sapiens]
          Length = 249

 Score = 40.8 bits (94), Expect = 0.001
 Identities = 20/23 (86%), Positives = 20/23 (86%), Gaps = 1/23 (4%)

Query: 131 SVTQAGVQWCDDLGSLQPPPPGF 153
           SVTQAGVQW  DLGSLQP PPGF
Sbjct: 227 SVTQAGVQW-HDLGSLQPLPPGF 248


>gi|28212280 hypothetical protein LOC283579 [Homo sapiens]
          Length = 122

 Score = 38.9 bits (89), Expect = 0.006
 Identities = 23/47 (48%), Positives = 29/47 (61%), Gaps = 5/47 (10%)

Query: 187 QAGVKLLTASDLPTLASQSVAITGVSHHAQP-----NPLIFCFSSST 228
           QAG++LL +S+ P  ASQS  ITGVSH A+P     N  +F    ST
Sbjct: 38  QAGLELLGSSNPPASASQSAGITGVSHCARPGEHDLNHTVFQVKDST 84


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.135    0.459 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,202,482
Number of Sequences: 37866
Number of extensions: 838287
Number of successful extensions: 2812
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 75
Number of HSP's that attempted gapping in prelim test: 2668
Number of HSP's gapped (non-prelim): 179
length of query: 299
length of database: 18,247,518
effective HSP length: 102
effective length of query: 197
effective length of database: 14,385,186
effective search space: 2833881642
effective search space used: 2833881642
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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