Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 169211844
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169211844 PREDICTED: hypothetical protein [Homo sapiens]
(193 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169211844 PREDICTED: hypothetical protein [Homo sapiens] 415 e-116
gi|239756845 PREDICTED: hypothetical protein [Homo sapiens] 359 e-100
gi|169211031 PREDICTED: hypothetical protein [Homo sapiens] 359 e-100
gi|239751791 PREDICTED: hypothetical protein [Homo sapiens] 56 2e-08
gi|239746282 PREDICTED: hypothetical protein XP_002343723 [Homo ... 56 2e-08
gi|239758013 PREDICTED: hypothetical protein [Homo sapiens] 51 7e-07
gi|169160624 PREDICTED: hypothetical protein [Homo sapiens] 51 7e-07
gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 50 1e-06
gi|239743069 PREDICTED: hypothetical protein XP_002342750 [Homo ... 49 2e-06
gi|239508715 PREDICTED: hypothetical protein [Homo sapiens] 49 2e-06
gi|239751535 PREDICTED: hypothetical protein [Homo sapiens] 49 3e-06
gi|239746046 PREDICTED: hypothetical protein XP_002343643 [Homo ... 49 3e-06
gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 ... 49 3e-06
gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 ... 49 3e-06
gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 ... 49 3e-06
gi|239754489 PREDICTED: hypothetical protein [Homo sapiens] 48 5e-06
gi|33457350 OTU domain containing 5 isoform a [Homo sapiens] 48 6e-06
gi|209977021 OTU domain containing 5 isoform b [Homo sapiens] 48 6e-06
gi|209977019 OTU domain containing 5 isoform b [Homo sapiens] 48 6e-06
gi|239748639 PREDICTED: hypothetical protein XP_002346752 [Homo ... 47 1e-05
gi|25777671 protein phosphatase 1, regulatory subunit 10 [Homo s... 46 2e-05
gi|239754110 PREDICTED: hypothetical protein XP_002345881 [Homo ... 46 2e-05
gi|253970504 Ewing sarcoma breakpoint region 1 isoform 4 [Homo s... 45 3e-05
gi|253970502 Ewing sarcoma breakpoint region 1 isoform 3 [Homo s... 45 3e-05
gi|253970500 Ewing sarcoma breakpoint region 1 isoform 1 [Homo s... 45 3e-05
gi|4885225 Ewing sarcoma breakpoint region 1 isoform 2 [Homo sap... 45 3e-05
gi|113412136 PREDICTED: hypothetical protein [Homo sapiens] 45 3e-05
gi|113408483 PREDICTED: hypothetical protein [Homo sapiens] 45 3e-05
gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo sa... 45 5e-05
gi|4758392 forkhead box D1 [Homo sapiens] 45 5e-05
>gi|169211844 PREDICTED: hypothetical protein [Homo sapiens]
Length = 193
Score = 415 bits (1066), Expect = e-116
Identities = 193/193 (100%), Positives = 193/193 (100%)
Query: 1 MVVPTQPARRLQPRKSSFPGDGDEAPGPGGGEGAAAGGGGGGLGSGGRSAQRRAGAGARR 60
MVVPTQPARRLQPRKSSFPGDGDEAPGPGGGEGAAAGGGGGGLGSGGRSAQRRAGAGARR
Sbjct: 1 MVVPTQPARRLQPRKSSFPGDGDEAPGPGGGEGAAAGGGGGGLGSGGRSAQRRAGAGARR 60
Query: 61 PIGAAPSVGPGGELQGWGRKSGCRPPGPEGWAGGRKLRRWLPPRRFSNFCCRSPCAQTAV 120
PIGAAPSVGPGGELQGWGRKSGCRPPGPEGWAGGRKLRRWLPPRRFSNFCCRSPCAQTAV
Sbjct: 61 PIGAAPSVGPGGELQGWGRKSGCRPPGPEGWAGGRKLRRWLPPRRFSNFCCRSPCAQTAV 120
Query: 121 RRRRRRAPSPRGAGWREGAGAGRGTPATMAGGEWAAEPLHLPQRGRRRRFTCRSGRPPRR 180
RRRRRRAPSPRGAGWREGAGAGRGTPATMAGGEWAAEPLHLPQRGRRRRFTCRSGRPPRR
Sbjct: 121 RRRRRRAPSPRGAGWREGAGAGRGTPATMAGGEWAAEPLHLPQRGRRRRFTCRSGRPPRR 180
Query: 181 GRGGGALGGASGS 193
GRGGGALGGASGS
Sbjct: 181 GRGGGALGGASGS 193
>gi|239756845 PREDICTED: hypothetical protein [Homo sapiens]
Length = 257
Score = 359 bits (922), Expect = e-100
Identities = 176/207 (85%), Positives = 176/207 (85%), Gaps = 22/207 (10%)
Query: 1 MVVPTQPARRLQPRKSSFPGDGDEAPGPGGGEGAAAGGGGGGLGSGGRSAQRRAGAGARR 60
MVVPTQPARRLQPRKSSFPGDGDEAPGPGGGEGAAAGGGGGGLGSGGRSAQRRAGAGARR
Sbjct: 1 MVVPTQPARRLQPRKSSFPGDGDEAPGPGGGEGAAAGGGGGGLGSGGRSAQRRAGAGARR 60
Query: 61 PIGAAPSVGPGGELQGWGRKSGCRPPGPEGWAGGRKLRRWLPPRRFSNFCCRSPCAQTAV 120
PIGAAPSVGPGGELQGWGRKSGCRPPGPEGWAGGRKLRRWLPPRRFSNFCCRSPCAQTAV
Sbjct: 61 PIGAAPSVGPGGELQGWGRKSGCRPPGPEGWAGGRKLRRWLPPRRFSNFCCRSPCAQTAV 120
Query: 121 RRRRRRAPSPRGAGWREGAGAGRGTPATMAGGEWAAEPLHLPQRGR-------------- 166
RRRRRRAPSPRGAGWREGAGAGRGTPATMAGGEWAAEPLHLPQRGR
Sbjct: 121 RRRRRRAPSPRGAGWREGAGAGRGTPATMAGGEWAAEPLHLPQRGRPAPLHLPEREATEA 180
Query: 167 -------RRRFTCRSGRPPRR-GRGGG 185
RRR PP R GRG G
Sbjct: 181 RPRRRRARRRLRVLEPHPPARLGRGIG 207
>gi|169211031 PREDICTED: hypothetical protein [Homo sapiens]
Length = 257
Score = 359 bits (922), Expect = e-100
Identities = 176/207 (85%), Positives = 176/207 (85%), Gaps = 22/207 (10%)
Query: 1 MVVPTQPARRLQPRKSSFPGDGDEAPGPGGGEGAAAGGGGGGLGSGGRSAQRRAGAGARR 60
MVVPTQPARRLQPRKSSFPGDGDEAPGPGGGEGAAAGGGGGGLGSGGRSAQRRAGAGARR
Sbjct: 1 MVVPTQPARRLQPRKSSFPGDGDEAPGPGGGEGAAAGGGGGGLGSGGRSAQRRAGAGARR 60
Query: 61 PIGAAPSVGPGGELQGWGRKSGCRPPGPEGWAGGRKLRRWLPPRRFSNFCCRSPCAQTAV 120
PIGAAPSVGPGGELQGWGRKSGCRPPGPEGWAGGRKLRRWLPPRRFSNFCCRSPCAQTAV
Sbjct: 61 PIGAAPSVGPGGELQGWGRKSGCRPPGPEGWAGGRKLRRWLPPRRFSNFCCRSPCAQTAV 120
Query: 121 RRRRRRAPSPRGAGWREGAGAGRGTPATMAGGEWAAEPLHLPQRGR-------------- 166
RRRRRRAPSPRGAGWREGAGAGRGTPATMAGGEWAAEPLHLPQRGR
Sbjct: 121 RRRRRRAPSPRGAGWREGAGAGRGTPATMAGGEWAAEPLHLPQRGRPAPLHLPEREATEA 180
Query: 167 -------RRRFTCRSGRPPRR-GRGGG 185
RRR PP R GRG G
Sbjct: 181 RPRRRRARRRLRVLEPHPPARLGRGIG 207
>gi|239751791 PREDICTED: hypothetical protein [Homo sapiens]
Length = 650
Score = 55.8 bits (133), Expect = 2e-08
Identities = 50/149 (33%), Positives = 63/149 (42%), Gaps = 25/149 (16%)
Query: 29 GGGEGAAAGGGGGGLGSGG-------RSAQR------RAGAGARRPIGAAPSVGPGGELQ 75
G G G AGG GGG G+ G RS++R + R GA P GP +
Sbjct: 148 GEGVGVGAGGEGGGEGAAGAASSLSERSSERVELQSDTDDSDTRVAEGARPRPGPTSSRR 207
Query: 76 GWGRKSGCRPPGPEGWAGGRK---LRRWLPP--RRFSNFCCRSPCAQTAV------RRRR 124
WGR G RP G G ++ RR P R S P A ++V R +R
Sbjct: 208 PWGRAGGLRPRGKRPARGKKRPSSQRRCSSPSAARASATSAPRPTAPSSVAQPSSARSQR 267
Query: 125 RRAPSPRGAGWREGAGA-GRGTPATMAGG 152
RRAP P AG +G G+ G P + G
Sbjct: 268 RRAPCPHRAGGADGVGSHGARAPGEGSAG 296
Score = 28.1 bits (61), Expect = 4.8
Identities = 43/148 (29%), Positives = 57/148 (38%), Gaps = 14/148 (9%)
Query: 11 LQPRKSSFPGD--GDEAPGPGGGEGAAAGGGGGGLGSGGRSAQRRAGAGARRPIGAAPSV 68
++P+++SF G G A G G G G G G R+ R G+G R + S
Sbjct: 30 VRPKETSFQGSKRGRLAAGRGLGAKVRVVGRPGNSGGRRRAGNRAWGSGRRGK--SRRSR 87
Query: 69 GPGGELQGWGRKSGCRPPGPEGWAGGRKLRRWLPPRRFSNFCCRSPCAQTAVRRRRRRAP 128
GPG W SG P P + G + L + S + ++ R
Sbjct: 88 GPG----PWPAGSG-GPRCPSAPSDGVRRCPRLTAHAAVTWVGVSDWRGSFLKLSSSR-- 140
Query: 129 SPRGAGWREGAGAGRGTPATMAGGEWAA 156
S RG EG G G G GGE AA
Sbjct: 141 STRGLVLGEGVGVGAGGE---GGGEGAA 165
>gi|239746282 PREDICTED: hypothetical protein XP_002343723 [Homo
sapiens]
Length = 725
Score = 55.8 bits (133), Expect = 2e-08
Identities = 50/149 (33%), Positives = 63/149 (42%), Gaps = 25/149 (16%)
Query: 29 GGGEGAAAGGGGGGLGSGG-------RSAQR------RAGAGARRPIGAAPSVGPGGELQ 75
G G G AGG GGG G+ G RS++R + R GA P GP +
Sbjct: 148 GEGVGVGAGGEGGGEGAAGAASSLSERSSERVELQSDTDDSDTRVAEGARPRPGPTSSRR 207
Query: 76 GWGRKSGCRPPGPEGWAGGRK---LRRWLPP--RRFSNFCCRSPCAQTAV------RRRR 124
WGR G RP G G ++ RR P R S P A ++V R +R
Sbjct: 208 PWGRAGGLRPRGKRPARGKKRPSSQRRCSSPSAARASATSAPRPTAPSSVAQPSSARSQR 267
Query: 125 RRAPSPRGAGWREGAGA-GRGTPATMAGG 152
RRAP P AG +G G+ G P + G
Sbjct: 268 RRAPCPHRAGGADGVGSHGARAPGEGSAG 296
Score = 28.1 bits (61), Expect = 4.8
Identities = 43/148 (29%), Positives = 57/148 (38%), Gaps = 14/148 (9%)
Query: 11 LQPRKSSFPGD--GDEAPGPGGGEGAAAGGGGGGLGSGGRSAQRRAGAGARRPIGAAPSV 68
++P+++SF G G A G G G G G G R+ R G+G R + S
Sbjct: 30 VRPKETSFQGSKRGRLAAGRGLGAKVRVVGRPGNSGGRRRAGNRAWGSGRRGK--SRRSR 87
Query: 69 GPGGELQGWGRKSGCRPPGPEGWAGGRKLRRWLPPRRFSNFCCRSPCAQTAVRRRRRRAP 128
GPG W SG P P + G + L + S + ++ R
Sbjct: 88 GPG----PWPAGSG-GPRCPSAPSDGVRRCPRLTAHAAVTWVGVSDWRGSFLKLSSSR-- 140
Query: 129 SPRGAGWREGAGAGRGTPATMAGGEWAA 156
S RG EG G G G GGE AA
Sbjct: 141 STRGLVLGEGVGVGAGGE---GGGEGAA 165
>gi|239758013 PREDICTED: hypothetical protein [Homo sapiens]
Length = 819
Score = 50.8 bits (120), Expect = 7e-07
Identities = 57/186 (30%), Positives = 79/186 (42%), Gaps = 34/186 (18%)
Query: 20 GDGDEAP---GPGGGEGAAAGG--GGGG------LGSGGRSAQRRAGAGARRPIGAAPSV 68
G G + P G + AAAG GGGG +G R QRR G RR +A
Sbjct: 319 GRGGKKPRRRGQKATKAAAAGTKRGGGGQQKAAVVGVKSRKKQRRRGKKPRRQKASAA-- 376
Query: 69 GPGGELQGWGRKSGCRPPGPEGWAGGRKLRRWLPPRRFSNFCCRSPCAQT---AVRRRRR 125
G + +G G K G R G GRK RW PRR + ++P A+ ++ RR
Sbjct: 377 --GAKSRGGGDKKGLREAKRRG--DGRKKPRWQNPRRRAQ---KAPAAKPRGGGSKKPRR 429
Query: 126 RAP-SPRGAGWREGAGAG-----RGTPATMAGGEWAAEPLHLPQRGRRRRFTCRSGRPPR 179
R P + + G + +G G RG A E AE RG +++ ++
Sbjct: 430 RGPKAAKSRGGKSRSGGGKKPRRRGQKARQKAAEAGAE-----SRGDKKQGRQKASAAGT 484
Query: 180 RGRGGG 185
+ RGGG
Sbjct: 485 KSRGGG 490
Score = 42.7 bits (99), Expect = 2e-04
Identities = 54/190 (28%), Positives = 68/190 (35%), Gaps = 46/190 (24%)
Query: 25 APGPGGGEGAAAGGGGGGLGSGGRSAQRR----AGAGARRP------IGAAPSVGPGGEL 74
A GGGE AA G LG GR +RR A G+++P AA S G
Sbjct: 98 AENRGGGEQKAAAAGTKSLGGRGRKPRRRGQKAAATGSKKPRWRAQKSAAAGSKNRGAGA 157
Query: 75 QGWGRKSGCRPPGPE----GWAGGRKLRRWLPPRRFSNFC------------CRSPCAQT 118
Q +G + G E A G K R PRR +S +T
Sbjct: 158 QKAAAAAGVKSQGGEKPQKAAAAGAKSRSGKKPRRRGAKSRGDEDKKGRQREAKSRFGKT 217
Query: 119 -AVRRRRRRAPSPRGAGWREGAGAGRGTPATMAGGEWAAEPLHLPQRGRRRRFTCRSGRP 177
RR++ R P P G + G G+ PQ+ RRR +G
Sbjct: 218 RGGRRKKHRRPKPAAGGAKSRRGGGK-----------------KPQKQRRRGQKAATGGK 260
Query: 178 PRRG--RGGG 185
R G RGGG
Sbjct: 261 SRVGKSRGGG 270
Score = 38.5 bits (88), Expect = 0.004
Identities = 54/193 (27%), Positives = 74/193 (38%), Gaps = 35/193 (18%)
Query: 20 GDGDEAPGPGGGEGAAAGGGGGGLGSGGRSA--QRRAGAGAR---RP------------- 61
G GD+ PG + AAAG G GG+ A Q+ AG GA+ +P
Sbjct: 589 GGGDKQPG---WQKAAAGVTKSRSGDGGKKAWRQKAAGTGAKSRKKPWRRGQKDAAAAEK 645
Query: 62 --IGAAPSVGPGGELQGWGRKSGCRPPGPEGWAGGRKLRRWLPPRRFSNFCCRSPCAQTA 119
A S G GG+ W + + A G++ PRR R Q A
Sbjct: 646 AWATGATSRGSGGKQPRWQKPAAAGSESSAAAAVGQEAEARKKPRR-RRAKSRGDGGQNA 704
Query: 120 ---VRRRRRRAPSPRGAGWREGAGA-GRGTPATMAGGEWAAEPLHLPQRGRRRRFTCRS- 174
+ +RR PR R G GA RG+ + G A+ R ++ +S
Sbjct: 705 AVGINPWQRRGKKPRLGKSRGGGGAKSRGSGGAKSRGSGGAK-----SRSGKKAAASKSH 759
Query: 175 -GRPPRRGRGGGA 186
G +R RGGGA
Sbjct: 760 GGGGAKRRRGGGA 772
Score = 38.1 bits (87), Expect = 0.005
Identities = 44/183 (24%), Positives = 62/183 (33%), Gaps = 22/183 (12%)
Query: 7 PARRLQPRKSSFPGDGDEAPGPGGGEGAAAGGGGGGLGSGGRSAQRRAGAGARRPIGAAP 66
P RR Q ++ P G G AA GG GG+ +RR G AR+ A
Sbjct: 407 PRRRAQKAPAAKPRGGGSKKPRRRGPKAAKSRGGKSRSGGGKKPRRR-GQKARQKAAEAG 465
Query: 67 SVGPGGELQGWGRKSGC----RPPGPEGWAGGRKLRRWLPPRRFSNFCCRSPCAQTAVRR 122
+ G + QG + S R G + +G RR + ++
Sbjct: 466 AESRGDKKQGRQKASAAGTKSRGGGLKSHSGKNLWRRGQKAEAAGEKATAAGAKSRGRKQ 525
Query: 123 RRRRAPSPRGAGWREGAGAGRGTPATMAGGEWAAEPLHLPQRGRRRRFTCRSGRPPRRGR 182
RR+ P+ GA R G R +A G T G ++ R
Sbjct: 526 PRRQKPAVAGAKSRVGGSKSRQRQKAVAAGA-----------------TSHGGGGNKQSR 568
Query: 183 GGG 185
GGG
Sbjct: 569 GGG 571
Score = 36.6 bits (83), Expect = 0.014
Identities = 49/182 (26%), Positives = 66/182 (36%), Gaps = 25/182 (13%)
Query: 29 GGGEGAAAGGGGGGLGSGGR--SAQRRAGAGARRPIGAAPSVGPGGELQGWGRKSGCRPP 86
GGG + GGGG G+ +A + G G ++P + G G G K R
Sbjct: 561 GGGNKQSRGGGGNKPRQWGQTAAAAKTRGGGDKQPGWQKAAAGVTKSRSGDGGKKAWRQK 620
Query: 87 GPEGWAGGRKLRRWLPPRRFSNFCCRSPCAQTAVRRRRRRAPSPRGAGWREGAGAGRGTP 146
A RK + W R + T R PR W++ A AG +
Sbjct: 621 AAGTGAKSRK-KPW--RRGQKDAAAAEKAWATGATSRGSGGKQPR---WQKPAAAGSESS 674
Query: 147 ATMAGGEWAAEPLHLPQRGRRR-------------RFTCRSGRPPRRGR---GGGALGGA 190
A A G+ AE P+R R + R G+ PR G+ GGGA
Sbjct: 675 AAAAVGQ-EAEARKKPRRRRAKSRGDGGQNAAVGINPWQRRGKKPRLGKSRGGGGAKSRG 733
Query: 191 SG 192
SG
Sbjct: 734 SG 735
Score = 33.9 bits (76), Expect = 0.088
Identities = 32/97 (32%), Positives = 42/97 (43%), Gaps = 20/97 (20%)
Query: 20 GDGDEAPGPGGGEGAAAGGGGGGLGS--------GGRSAQRRAGAGARRPIGAAPSVGPG 71
G G ++ G GG + +GG G GG A+RR G GA+ G +V G
Sbjct: 726 GGGAKSRGSGGAKSRGSGGAKSRSGKKAAASKSHGGGGAKRRRGGGAKSRSG-EKAVTAG 784
Query: 72 GELQGWGRKSGCRPP--------GPEGWAGGRK-LRR 99
G Q G +PP G + AGG+K LRR
Sbjct: 785 G--QKAAAAGGKKPPRVKSRGGRGQKAAAGGKKPLRR 819
Score = 33.5 bits (75), Expect = 0.12
Identities = 55/220 (25%), Positives = 78/220 (35%), Gaps = 50/220 (22%)
Query: 5 TQPARRLQPRKSSFPGDGDEAPGPGG---------GEGAAAGGG-------GGGLGSGGR 48
T+ RR + R+ G ++ GG G+ AA GG GGG R
Sbjct: 217 TRGGRRKKHRRPKPAAGGAKSRRGGGKKPQKQRRRGQKAATGGKSRVGKSRGGGDKKLRR 276
Query: 49 SAQRRAGAGARRPIGAAPSVGPGGELQGWGRKSGCRPPGPEGWAGGRKLRRWLPPRRFSN 108
Q A AGA+R A P + +G P GG+K PRR
Sbjct: 277 QGQNAALAGAKRRGAATAGEKPAAKGRGGRGPKSLGGQNPRWGRGGKK------PRRRGQ 330
Query: 109 FCCRSPCAQT----------------AVRRRRRRAPSPR-----GAGWR-EGAGAGRGTP 146
++ A T + +++RRR PR AG + G G +G
Sbjct: 331 KATKAAAAGTKRGGGGQQKAAVVGVKSRKKQRRRGKKPRRQKASAAGAKSRGGGDKKGLR 390
Query: 147 ATMAGGEWAAEPLHLPQRGRRRRFTCRSGRPPRRGRGGGA 186
G+ +P Q RRR + +P RGGG+
Sbjct: 391 EAKRRGDGRKKPRW--QNPRRRAQKAPAAKP----RGGGS 424
>gi|169160624 PREDICTED: hypothetical protein [Homo sapiens]
Length = 284
Score = 50.8 bits (120), Expect = 7e-07
Identities = 50/166 (30%), Positives = 62/166 (37%), Gaps = 9/166 (5%)
Query: 7 PARRLQPRKSSFPGDG-DEAPGPGGGEGAAAGGGGGGLGSGGRSAQRRAGAGA---RRPI 62
P RR PR + G P PGG +G A GG G G ++RA GA RP
Sbjct: 116 PPRRASPRHAPAAAGGVSMGPSPGGKDGGAFIWGGARAGGGEALTRKRARGGAVPGDRPG 175
Query: 63 GAAPSVGPGGELQGWGRKSG-CRPPGPEGWAGGRKLRRWLPPRRFSNFCCRSPCAQTAVR 121
G A S P L R G C P G + G +LRR RR + P AQ
Sbjct: 176 GGAASPLPAPLLASRPRPRGRCAPDGAQAGVGASRLRR----RRAPSGTLNGPYAQDKHG 231
Query: 122 RRRRRAPSPRGAGWREGAGAGRGTPATMAGGEWAAEPLHLPQRGRR 167
+ AP+ A G+ P T+ P + R R
Sbjct: 232 LNQVHAPAGDALTEVRTAVPGQVKPRTLGPKNLTGTPCLMKLRTAR 277
>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
Length = 653
Score = 50.1 bits (118), Expect = 1e-06
Identities = 46/135 (34%), Positives = 57/135 (42%), Gaps = 27/135 (20%)
Query: 14 RKSSFPGDGDEAPGPGGGEGAAAGGGGGGLGSGGRSAQRRAGAGARRPIGAAPSVGPGGE 73
R SS G G APGPG G+ G G G G R+ +R A RP +PS G G
Sbjct: 427 RSSSDSGSGRGAPGPGPEPGSERGHG----GHGKRAKERPPRA---RPASTSPSPGAHGR 479
Query: 74 LQGWGRKSGCRPPGPEGWAGGRKLRRWLPPRRFSNFCCRSPCAQTAVRRRRR-----RAP 128
G KS R PGP PR +S+ RSP + +R R+P
Sbjct: 480 RGGPEGKSSSRSPGPH-------------PRSWSS--SRSPSKSRSRSAEKRPHSPSRSP 524
Query: 129 SPRGAGWREGAGAGR 143
SP+ R+ G GR
Sbjct: 525 SPKKPLSRDKDGEGR 539
Score = 44.7 bits (104), Expect = 5e-05
Identities = 65/216 (30%), Positives = 82/216 (37%), Gaps = 38/216 (17%)
Query: 7 PARRLQPRKS-SFPGDGDEAPGPGGGEGAAAGGGGGGLGS-----GGR-----SAQRRAG 55
P R + RK+ S G +P P GG G + GG G GGR S +
Sbjct: 280 PKHRDEGRKTGSQRSSGSRSPSPSGGSGWGSPQRNGGSGQRSGAHGGRPGSAHSPPDKPS 339
Query: 56 AGARRPIGAAPSVGPGGELQGWGRKSGCRPPGPEG----WAGGRKLRRWLPPRRFSNFCC 111
+ + R A + P +G S P +G AGG RR RR
Sbjct: 340 SPSPRVRDKAAAAAPTPPARGKESPSPRSAPSSQGRGGRAAGGAGRRRRRRRRR-----R 394
Query: 112 RSPCAQTAVRRRRRRAP---SPRG-------AGWREGAGAGRGTPATMAGGEWAAEPLH- 160
RS + +A RRR RR P PRG A +G+GRG P G E +E H
Sbjct: 395 RSRSSASAPRRRGRRRPRPAPPRGSSRSLSRARSSSDSGSGRGAPG--PGPEPGSERGHG 452
Query: 161 -----LPQRGRRRRFTCRSGRPPRRGRGGGALGGAS 191
+R R R S P GR GG G +S
Sbjct: 453 GHGKRAKERPPRARPASTSPSPGAHGRRGGPEGKSS 488
Score = 38.1 bits (87), Expect = 0.005
Identities = 49/202 (24%), Positives = 70/202 (34%), Gaps = 43/202 (21%)
Query: 4 PTQPARRLQPRKSSF----PGDGDEAPGPGGGEGAAAGGGGGGLGSGGRSAQRR------ 53
P+ P+ R++ + ++ P G E+P P + GG G+G R +RR
Sbjct: 338 PSSPSPRVRDKAAAAAPTPPARGKESPSPRSAPSSQGRGGRAAGGAGRRRRRRRRRRRSR 397
Query: 54 --AGAGARR---------PIGAAPSVGPGGELQGWGRKSGCRPPGPE-----GWAGGRKL 97
A A RR P G++ S+ G G PGPE G G K
Sbjct: 398 SSASAPRRRGRRRPRPAPPRGSSRSLSRARSSSDSGSGRGAPGPGPEPGSERGHGGHGKR 457
Query: 98 RRWLPPRRFSNFCCRSPCAQTAVRRRRRRAPSPRGAGWREGAGAGRGTPATMAGGEWAAE 157
+ PPR R +PSP GA R G G+ + + +
Sbjct: 458 AKERPPR----------------ARPASTSPSP-GAHGRRGGPEGKSSSRSPGPHPRSWS 500
Query: 158 PLHLPQRGRRRRFTCRSGRPPR 179
P + R R R P R
Sbjct: 501 SSRSPSKSRSRSAEKRPHSPSR 522
Score = 36.6 bits (83), Expect = 0.014
Identities = 43/153 (28%), Positives = 52/153 (33%), Gaps = 44/153 (28%)
Query: 58 ARRPIGAAPSVGPGGELQGWGRKSGCRPPGP---EGWA---------------GGRKLRR 99
+R P +P G G R SG R P P GW GGR
Sbjct: 272 SRSPSRLSPKHRDEGRKTGSQRSSGSRSPSPSGGSGWGSPQRNGGSGQRSGAHGGRPGSA 331
Query: 100 WLPPRRFSNFCCR----------SPCAQTAVRRRRRRAPSPRGAGWREGAGAGRGTPATM 149
PP + S+ R +P A+ R APS +G G R GAGR
Sbjct: 332 HSPPDKPSSPSPRVRDKAAAAAPTPPARGKESPSPRSAPSSQGRGGRAAGGAGR------ 385
Query: 150 AGGEWAAEPLHLPQRGRRRRFTCRSGRPPRRGR 182
+R RRRR + P RRGR
Sbjct: 386 ----------RRRRRRRRRRSRSSASAPRRRGR 408
>gi|239743069 PREDICTED: hypothetical protein XP_002342750 [Homo
sapiens]
Length = 231
Score = 49.3 bits (116), Expect = 2e-06
Identities = 56/176 (31%), Positives = 67/176 (38%), Gaps = 34/176 (19%)
Query: 19 PGDGDEAPGPGGGEGAAAGGGGGGLGS----GGRSAQRRAGAGAR-----RPIGAAPSVG 69
P + E P P G + GGGGGG G+ GR AQR GAGA + AAPS
Sbjct: 69 PEEPPEEPAPAIAPGGS-GGGGGGCGAQHWAAGRRAQREQGAGAAVLADFGHVRAAPS-- 125
Query: 70 PGGELQGWGRKSGCRPPGPEGWAGGRKLRRWLPPRRFSNFCCRSPCAQTAVRRRRRRAPS 129
G R+ R G G G + R+ P R + RS A A R R P
Sbjct: 126 ------GLRRRRLQRRRGGRGGRGAGRARKPGPDRAGAE---RSLPAHRAPRLARPPVPP 176
Query: 130 PRGAGWREGAGAGRGTPATMAGGEWAAEPLHLPQRGRRRRFTCRSGRPPRRGRGGG 185
R AG G A P+ G R + R+ PPR GGG
Sbjct: 177 SVAHVARASAGLG-------------ARPVPGGPAGPRESWARRTSSPPRGAAGGG 219
>gi|239508715 PREDICTED: hypothetical protein [Homo sapiens]
Length = 231
Score = 49.3 bits (116), Expect = 2e-06
Identities = 56/176 (31%), Positives = 67/176 (38%), Gaps = 34/176 (19%)
Query: 19 PGDGDEAPGPGGGEGAAAGGGGGGLGS----GGRSAQRRAGAGAR-----RPIGAAPSVG 69
P + E P P G + GGGGGG G+ GR AQR GAGA + AAPS
Sbjct: 69 PEEPPEEPAPAIAPGGS-GGGGGGCGAQHWAAGRRAQREQGAGAAVLADFGHVRAAPS-- 125
Query: 70 PGGELQGWGRKSGCRPPGPEGWAGGRKLRRWLPPRRFSNFCCRSPCAQTAVRRRRRRAPS 129
G R+ R G G G + R+ P R + RS A A R R P
Sbjct: 126 ------GLRRRRLQRRRGGRGGRGAGRARKPGPDRAGAE---RSLPAHRAPRLARPPVPP 176
Query: 130 PRGAGWREGAGAGRGTPATMAGGEWAAEPLHLPQRGRRRRFTCRSGRPPRRGRGGG 185
R AG G A P+ G R + R+ PPR GGG
Sbjct: 177 SVAHVARASAGLG-------------ARPVPGGPAGPRESWARRTSSPPRGAAGGG 219
>gi|239751535 PREDICTED: hypothetical protein [Homo sapiens]
Length = 255
Score = 48.9 bits (115), Expect = 3e-06
Identities = 62/195 (31%), Positives = 70/195 (35%), Gaps = 31/195 (15%)
Query: 24 EAPGPGGGEGAAAGGGGGGLGSGGRSAQRRAGAG--ARRPIGA-APSVGPGGELQGWGRK 80
+ P G AGGGGG G GG +R G G AR A G GG+LQ
Sbjct: 28 QPPAARSPRGPRAGGGGGDAGGGGAPVRRARGGGCWARAYQDARCFGRGEGGDLQ-VSSG 86
Query: 81 SGCRPPGPEGWAGGRKLR--------RWLPPRRFSNFCCRSPCAQTAVRRRRRRA-PSPR 131
G PP E A R + PPR F S QT +RRR A P+PR
Sbjct: 87 PGAAPPA-EFRASARSAQGSRDVPAGPGFPPRLPRPFTSASFSNQTRLRRRSASALPAPR 145
Query: 132 GAGWREGAG---------AGRGTPATMAGGEWAAEPLHLPQRGRRRRFTCRSGRP----- 177
R G G +P G AA G R R +GR
Sbjct: 146 LCPQRASPGCSSPGVRGPGGGASPRARGGNAAAALAARQAAGGGRSRSAFVAGRDAALAC 205
Query: 178 ---PRRGRGGGALGG 189
PRR RG GA G
Sbjct: 206 AQLPRRPRGAGARRG 220
Score = 41.2 bits (95), Expect = 6e-04
Identities = 39/115 (33%), Positives = 44/115 (38%), Gaps = 19/115 (16%)
Query: 7 PARRLQPRKSSFPGDGDEAPGPGGGEGAAAGGG------------GGGLGS----GGRSA 50
PA RL P+++S GPGGG A GG GGG GR A
Sbjct: 142 PAPRLCPQRASPGCSSPGVRGPGGGASPRARGGNAAAALAARQAAGGGRSRSAFVAGRDA 201
Query: 51 QRRAGAGARRPIGAAPSVGPGGELQGWGRKSGCRPPGPEGWAGGRKLRRWLPPRR 105
RRP GA G L G G + RP GP + RWL PRR
Sbjct: 202 ALACAQLPRRPRGAGARRGMRRRL-GAGERPAPRPRGPP--RAPARGARWLRPRR 253
>gi|239746046 PREDICTED: hypothetical protein XP_002343643 [Homo
sapiens]
Length = 255
Score = 48.9 bits (115), Expect = 3e-06
Identities = 62/195 (31%), Positives = 70/195 (35%), Gaps = 31/195 (15%)
Query: 24 EAPGPGGGEGAAAGGGGGGLGSGGRSAQRRAGAG--ARRPIGA-APSVGPGGELQGWGRK 80
+ P G AGGGGG G GG +R G G AR A G GG+LQ
Sbjct: 28 QPPAARSPRGPRAGGGGGDAGGGGAPVRRARGGGCWARAYQDARCFGRGEGGDLQ-VSSG 86
Query: 81 SGCRPPGPEGWAGGRKLR--------RWLPPRRFSNFCCRSPCAQTAVRRRRRRA-PSPR 131
G PP E A R + PPR F S QT +RRR A P+PR
Sbjct: 87 PGAAPPA-EFRASARSAQGSRDVPAGPGFPPRLPRPFTSASFSNQTRLRRRSASALPAPR 145
Query: 132 GAGWREGAG---------AGRGTPATMAGGEWAAEPLHLPQRGRRRRFTCRSGRP----- 177
R G G +P G AA G R R +GR
Sbjct: 146 LCPQRASPGCSSPGVRGPGGGASPRARGGNAAAALAARQAAGGGRSRSAFVAGRDAALAC 205
Query: 178 ---PRRGRGGGALGG 189
PRR RG GA G
Sbjct: 206 AQLPRRPRGAGARRG 220
Score = 41.2 bits (95), Expect = 6e-04
Identities = 39/115 (33%), Positives = 44/115 (38%), Gaps = 19/115 (16%)
Query: 7 PARRLQPRKSSFPGDGDEAPGPGGGEGAAAGGG------------GGGLGS----GGRSA 50
PA RL P+++S GPGGG A GG GGG GR A
Sbjct: 142 PAPRLCPQRASPGCSSPGVRGPGGGASPRARGGNAAAALAARQAAGGGRSRSAFVAGRDA 201
Query: 51 QRRAGAGARRPIGAAPSVGPGGELQGWGRKSGCRPPGPEGWAGGRKLRRWLPPRR 105
RRP GA G L G G + RP GP + RWL PRR
Sbjct: 202 ALACAQLPRRPRGAGARRGMRRRL-GAGERPAPRPRGPP--RAPARGARWLRPRR 253
>gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2
[Homo sapiens]
Length = 2191
Score = 48.5 bits (114), Expect = 3e-06
Identities = 27/68 (39%), Positives = 28/68 (41%)
Query: 20 GDGDEAPGPGGGEGAAAGGGGGGLGSGGRSAQRRAGAGARRPIGAAPSVGPGGELQGWGR 79
G G G GGG G GGGG G G G A A A A G G GG G+G
Sbjct: 250 GGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGV 309
Query: 80 KSGCRPPG 87
S R G
Sbjct: 310 LSSPRQQG 317
Score = 34.3 bits (77), Expect = 0.068
Identities = 24/70 (34%), Positives = 28/70 (40%), Gaps = 17/70 (24%)
Query: 20 GDGDEAPGPGGGEGAAAGG-----------------GGGGLGSGGRSAQRRAGAGARRPI 62
G G + G GGG GA AGG GGGG G G S+ + R
Sbjct: 257 GGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQ 316
Query: 63 GAAPSVGPGG 72
G +GPGG
Sbjct: 317 GGGMMMGPGG 326
Score = 32.0 bits (71), Expect = 0.34
Identities = 46/179 (25%), Positives = 56/179 (31%), Gaps = 12/179 (6%)
Query: 19 PGDGDEAPGPGGGEGAAAGGGGGGLGSGGRSAQRRAGAGARRPIGAAPSVGPGGELQGWG 78
PG E P GG + +AAGG G + G P G E G G
Sbjct: 92 PGPDMEQPQHGGAKDSAAGGQA---DPPGPPLLSKPGDEDDAPPKMGEPAGGRYEHPGLG 148
Query: 79 RKSGCRPPGPEGWAGGRKLRRWLPPRRFSNFCCRSPCAQTAVRRRRRRAPSPRGAGWREG 138
+PP GG +P F+N+ + A R G G
Sbjct: 149 ALGTQQPPVAVPGGGGGPAA--VP--EFNNYYGSAAPASGGPGGRAGPCFDQHGGQQSPG 204
Query: 139 AGAGRGTPATMAGGEWAAEPLHLPQRGRRRRFTCRS----GRPPRRGRGGGALGGASGS 193
G A AG + +PL G C RP G GGG GG GS
Sbjct: 205 MGMMHSASAAAAGAPGSMDPLQNSHEGYPNS-QCNHYPGYSRPGAGGGGGGGGGGGGGS 262
Score = 27.3 bits (59), Expect = 8.3
Identities = 43/191 (22%), Positives = 60/191 (31%), Gaps = 16/191 (8%)
Query: 11 LQPRKSSFPGDGDEAPGPGGGEGAAAGGGGGGLGSGGRSAQRRAGAGARRPIGAAPSVGP 70
+ P ++S G + G GGGGG G GG G G G A G
Sbjct: 222 MDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGA---GA 278
Query: 71 GGELQGWGRKSGCRPPGPEGWAGGRKLRRWL--PPRRFSNFCCRSPCAQTAVRRRRRRAP 128
G + G G GG + PR+ P A + A
Sbjct: 279 GAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAG 338
Query: 129 SPRGAGWREGAGAGR---GTPATMAGGEWAAEPLHLPQRGRRRRFTCRSGRPP------- 178
S G G++ AG + G T+ + P+ G ++ S PP
Sbjct: 339 SAAG-GFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQS 397
Query: 179 RRGRGGGALGG 189
+ G A GG
Sbjct: 398 QAAAAGAAAGG 408
>gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1
[Homo sapiens]
Length = 2231
Score = 48.5 bits (114), Expect = 3e-06
Identities = 27/68 (39%), Positives = 28/68 (41%)
Query: 20 GDGDEAPGPGGGEGAAAGGGGGGLGSGGRSAQRRAGAGARRPIGAAPSVGPGGELQGWGR 79
G G G GGG G GGGG G G G A A A A G G GG G+G
Sbjct: 250 GGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGV 309
Query: 80 KSGCRPPG 87
S R G
Sbjct: 310 LSSPRQQG 317
Score = 34.3 bits (77), Expect = 0.068
Identities = 24/70 (34%), Positives = 28/70 (40%), Gaps = 17/70 (24%)
Query: 20 GDGDEAPGPGGGEGAAAGG-----------------GGGGLGSGGRSAQRRAGAGARRPI 62
G G + G GGG GA AGG GGGG G G S+ + R
Sbjct: 257 GGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQ 316
Query: 63 GAAPSVGPGG 72
G +GPGG
Sbjct: 317 GGGMMMGPGG 326
Score = 32.0 bits (71), Expect = 0.34
Identities = 46/179 (25%), Positives = 56/179 (31%), Gaps = 12/179 (6%)
Query: 19 PGDGDEAPGPGGGEGAAAGGGGGGLGSGGRSAQRRAGAGARRPIGAAPSVGPGGELQGWG 78
PG E P GG + +AAGG G + G P G E G G
Sbjct: 92 PGPDMEQPQHGGAKDSAAGGQA---DPPGPPLLSKPGDEDDAPPKMGEPAGGRYEHPGLG 148
Query: 79 RKSGCRPPGPEGWAGGRKLRRWLPPRRFSNFCCRSPCAQTAVRRRRRRAPSPRGAGWREG 138
+PP GG +P F+N+ + A R G G
Sbjct: 149 ALGTQQPPVAVPGGGGGPAA--VP--EFNNYYGSAAPASGGPGGRAGPCFDQHGGQQSPG 204
Query: 139 AGAGRGTPATMAGGEWAAEPLHLPQRGRRRRFTCRS----GRPPRRGRGGGALGGASGS 193
G A AG + +PL G C RP G GGG GG GS
Sbjct: 205 MGMMHSASAAAAGAPGSMDPLQNSHEGYPNS-QCNHYPGYSRPGAGGGGGGGGGGGGGS 262
Score = 27.3 bits (59), Expect = 8.3
Identities = 43/191 (22%), Positives = 60/191 (31%), Gaps = 16/191 (8%)
Query: 11 LQPRKSSFPGDGDEAPGPGGGEGAAAGGGGGGLGSGGRSAQRRAGAGARRPIGAAPSVGP 70
+ P ++S G + G GGGGG G GG G G G A G
Sbjct: 222 MDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGA---GA 278
Query: 71 GGELQGWGRKSGCRPPGPEGWAGGRKLRRWL--PPRRFSNFCCRSPCAQTAVRRRRRRAP 128
G + G G GG + PR+ P A + A
Sbjct: 279 GAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAG 338
Query: 129 SPRGAGWREGAGAGR---GTPATMAGGEWAAEPLHLPQRGRRRRFTCRSGRPP------- 178
S G G++ AG + G T+ + P+ G ++ S PP
Sbjct: 339 SAAG-GFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQS 397
Query: 179 RRGRGGGALGG 189
+ G A GG
Sbjct: 398 QAAAAGAAAGG 408
>gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3
[Homo sapiens]
Length = 2178
Score = 48.5 bits (114), Expect = 3e-06
Identities = 27/68 (39%), Positives = 28/68 (41%)
Query: 20 GDGDEAPGPGGGEGAAAGGGGGGLGSGGRSAQRRAGAGARRPIGAAPSVGPGGELQGWGR 79
G G G GGG G GGGG G G G A A A A G G GG G+G
Sbjct: 250 GGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGV 309
Query: 80 KSGCRPPG 87
S R G
Sbjct: 310 LSSPRQQG 317
Score = 34.3 bits (77), Expect = 0.068
Identities = 24/70 (34%), Positives = 28/70 (40%), Gaps = 17/70 (24%)
Query: 20 GDGDEAPGPGGGEGAAAGG-----------------GGGGLGSGGRSAQRRAGAGARRPI 62
G G + G GGG GA AGG GGGG G G S+ + R
Sbjct: 257 GGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQ 316
Query: 63 GAAPSVGPGG 72
G +GPGG
Sbjct: 317 GGGMMMGPGG 326
Score = 32.0 bits (71), Expect = 0.34
Identities = 46/179 (25%), Positives = 56/179 (31%), Gaps = 12/179 (6%)
Query: 19 PGDGDEAPGPGGGEGAAAGGGGGGLGSGGRSAQRRAGAGARRPIGAAPSVGPGGELQGWG 78
PG E P GG + +AAGG G + G P G E G G
Sbjct: 92 PGPDMEQPQHGGAKDSAAGGQA---DPPGPPLLSKPGDEDDAPPKMGEPAGGRYEHPGLG 148
Query: 79 RKSGCRPPGPEGWAGGRKLRRWLPPRRFSNFCCRSPCAQTAVRRRRRRAPSPRGAGWREG 138
+PP GG +P F+N+ + A R G G
Sbjct: 149 ALGTQQPPVAVPGGGGGPAA--VP--EFNNYYGSAAPASGGPGGRAGPCFDQHGGQQSPG 204
Query: 139 AGAGRGTPATMAGGEWAAEPLHLPQRGRRRRFTCRS----GRPPRRGRGGGALGGASGS 193
G A AG + +PL G C RP G GGG GG GS
Sbjct: 205 MGMMHSASAAAAGAPGSMDPLQNSHEGYPNS-QCNHYPGYSRPGAGGGGGGGGGGGGGS 262
Score = 27.3 bits (59), Expect = 8.3
Identities = 43/191 (22%), Positives = 60/191 (31%), Gaps = 16/191 (8%)
Query: 11 LQPRKSSFPGDGDEAPGPGGGEGAAAGGGGGGLGSGGRSAQRRAGAGARRPIGAAPSVGP 70
+ P ++S G + G GGGGG G GG G G G A G
Sbjct: 222 MDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGA---GA 278
Query: 71 GGELQGWGRKSGCRPPGPEGWAGGRKLRRWL--PPRRFSNFCCRSPCAQTAVRRRRRRAP 128
G + G G GG + PR+ P A + A
Sbjct: 279 GAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAG 338
Query: 129 SPRGAGWREGAGAGR---GTPATMAGGEWAAEPLHLPQRGRRRRFTCRSGRPP------- 178
S G G++ AG + G T+ + P+ G ++ S PP
Sbjct: 339 SAAG-GFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQS 397
Query: 179 RRGRGGGALGG 189
+ G A GG
Sbjct: 398 QAAAAGAAAGG 408
>gi|239754489 PREDICTED: hypothetical protein [Homo sapiens]
Length = 228
Score = 48.1 bits (113), Expect = 5e-06
Identities = 56/176 (31%), Positives = 66/176 (37%), Gaps = 37/176 (21%)
Query: 19 PGDGDEAPGPGGGEGAAAGGGGGGLGS----GGRSAQRRAGAGAR-----RPIGAAPSVG 69
P + E P P A GGGGGG G+ GR AQR GAGA + AAPS
Sbjct: 69 PEEPPEEPAPA----IAPGGGGGGCGAQHWAAGRRAQREQGAGAAVLADFGHVRAAPS-- 122
Query: 70 PGGELQGWGRKSGCRPPGPEGWAGGRKLRRWLPPRRFSNFCCRSPCAQTAVRRRRRRAPS 129
G R+ R G G G + R+ P R + RS A A R R P
Sbjct: 123 ------GLRRRRLQRRRGGRGGRGAGRARKPGPDRAGAE---RSLPAHRAPRLARPPVPP 173
Query: 130 PRGAGWREGAGAGRGTPATMAGGEWAAEPLHLPQRGRRRRFTCRSGRPPRRGRGGG 185
R AG G A P+ G R + R+ PPR GGG
Sbjct: 174 SVAHVARASAGLG-------------ARPVPGGPAGPRESWARRTSSPPRGAAGGG 216
>gi|33457350 OTU domain containing 5 isoform a [Homo sapiens]
Length = 571
Score = 47.8 bits (112), Expect = 6e-06
Identities = 56/191 (29%), Positives = 67/191 (35%), Gaps = 42/191 (21%)
Query: 13 PRKSSFPGDGDEA-----PGP---GGGEGAAAGGGGGGLGSGGRSAQRRAGAGARRPIGA 64
P+K P D D A PGP G G GGGG G GG R +G RP +
Sbjct: 5 PKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRAS 64
Query: 65 APSVGPGGELQGWGRKSGCRPPGPEGWAGGRKLRRWLPPRRFSNFCCRSPCAQTAVRRRR 124
P GP PGP G L RW P A R +
Sbjct: 65 PPPQGP--------------LPGPPG-----ALHRW---------ALAVPPGAVAGPRPQ 96
Query: 125 RRAPSPRGAGWREGAGAGRGTPATMAGGEWAAEPLHLPQRGRRRRFTCRSG----RPPRR 180
+ +P P G G G G A AG A + + G C SG + R+
Sbjct: 97 QASPPPCGGPGGPGGGPGDALGAAAAG--VGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQ 154
Query: 181 GRGGGALGGAS 191
G GA+GG S
Sbjct: 155 APGVGAVGGGS 165
Score = 34.7 bits (78), Expect = 0.052
Identities = 28/88 (31%), Positives = 34/88 (38%), Gaps = 7/88 (7%)
Query: 8 ARRLQPRKSSFPGDGDEAPGPGGGEGAAAGGGGGGLGSGGRSAQRRAGAGARR-PIGAAP 66
A + P + P +P P GG G GG G LG+ AG GA +G
Sbjct: 82 ALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAAA------AGVGAAGVVVGVGG 135
Query: 67 SVGPGGELQGWGRKSGCRPPGPEGWAGG 94
+VG GG G G R G GG
Sbjct: 136 AVGVGGCCSGPGHSKRRRQAPGVGAVGG 163
>gi|209977021 OTU domain containing 5 isoform b [Homo sapiens]
Length = 566
Score = 47.8 bits (112), Expect = 6e-06
Identities = 56/191 (29%), Positives = 67/191 (35%), Gaps = 42/191 (21%)
Query: 13 PRKSSFPGDGDEA-----PGP---GGGEGAAAGGGGGGLGSGGRSAQRRAGAGARRPIGA 64
P+K P D D A PGP G G GGGG G GG R +G RP +
Sbjct: 5 PKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRAS 64
Query: 65 APSVGPGGELQGWGRKSGCRPPGPEGWAGGRKLRRWLPPRRFSNFCCRSPCAQTAVRRRR 124
P GP PGP G L RW P A R +
Sbjct: 65 PPPQGP--------------LPGPPG-----ALHRW---------ALAVPPGAVAGPRPQ 96
Query: 125 RRAPSPRGAGWREGAGAGRGTPATMAGGEWAAEPLHLPQRGRRRRFTCRSG----RPPRR 180
+ +P P G G G G A AG A + + G C SG + R+
Sbjct: 97 QASPPPCGGPGGPGGGPGDALGAAAAG--VGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQ 154
Query: 181 GRGGGALGGAS 191
G GA+GG S
Sbjct: 155 APGVGAVGGGS 165
Score = 34.7 bits (78), Expect = 0.052
Identities = 28/88 (31%), Positives = 34/88 (38%), Gaps = 7/88 (7%)
Query: 8 ARRLQPRKSSFPGDGDEAPGPGGGEGAAAGGGGGGLGSGGRSAQRRAGAGARR-PIGAAP 66
A + P + P +P P GG G GG G LG+ AG GA +G
Sbjct: 82 ALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAAA------AGVGAAGVVVGVGG 135
Query: 67 SVGPGGELQGWGRKSGCRPPGPEGWAGG 94
+VG GG G G R G GG
Sbjct: 136 AVGVGGCCSGPGHSKRRRQAPGVGAVGG 163
>gi|209977019 OTU domain containing 5 isoform b [Homo sapiens]
Length = 566
Score = 47.8 bits (112), Expect = 6e-06
Identities = 56/191 (29%), Positives = 67/191 (35%), Gaps = 42/191 (21%)
Query: 13 PRKSSFPGDGDEA-----PGP---GGGEGAAAGGGGGGLGSGGRSAQRRAGAGARRPIGA 64
P+K P D D A PGP G G GGGG G GG R +G RP +
Sbjct: 5 PKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRAS 64
Query: 65 APSVGPGGELQGWGRKSGCRPPGPEGWAGGRKLRRWLPPRRFSNFCCRSPCAQTAVRRRR 124
P GP PGP G L RW P A R +
Sbjct: 65 PPPQGP--------------LPGPPG-----ALHRW---------ALAVPPGAVAGPRPQ 96
Query: 125 RRAPSPRGAGWREGAGAGRGTPATMAGGEWAAEPLHLPQRGRRRRFTCRSG----RPPRR 180
+ +P P G G G G A AG A + + G C SG + R+
Sbjct: 97 QASPPPCGGPGGPGGGPGDALGAAAAG--VGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQ 154
Query: 181 GRGGGALGGAS 191
G GA+GG S
Sbjct: 155 APGVGAVGGGS 165
Score = 34.7 bits (78), Expect = 0.052
Identities = 28/88 (31%), Positives = 34/88 (38%), Gaps = 7/88 (7%)
Query: 8 ARRLQPRKSSFPGDGDEAPGPGGGEGAAAGGGGGGLGSGGRSAQRRAGAGARR-PIGAAP 66
A + P + P +P P GG G GG G LG+ AG GA +G
Sbjct: 82 ALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAAA------AGVGAAGVVVGVGG 135
Query: 67 SVGPGGELQGWGRKSGCRPPGPEGWAGG 94
+VG GG G G R G GG
Sbjct: 136 AVGVGGCCSGPGHSKRRRQAPGVGAVGG 163
>gi|239748639 PREDICTED: hypothetical protein XP_002346752 [Homo
sapiens]
Length = 286
Score = 46.6 bits (109), Expect = 1e-05
Identities = 22/40 (55%), Positives = 25/40 (62%)
Query: 20 GDGDEAPGPGGGEGAAAGGGGGGLGSGGRSAQRRAGAGAR 59
G G EA GGG +A GGGGGG G GGR ++R G G R
Sbjct: 160 GGGAEAQFLGGGRSSAGGGGGGGGGGGGRGSRRGRGGGER 199
Score = 36.2 bits (82), Expect = 0.018
Identities = 28/84 (33%), Positives = 34/84 (40%), Gaps = 14/84 (16%)
Query: 5 TQPARRLQPRKSSFPGDGDEAPGPGGGEGAAAGGGGGGLGSGGRSAQRRAGAGARRPIGA 64
T PA PG G A G G ++ GGGGG G GG G G+RR G
Sbjct: 143 TLPAAAATTTALDGPGAGGGAEAQFLGGGRSSAGGGGGGGGGG------GGRGSRRGRGG 196
Query: 65 APSVGPGGE--------LQGWGRK 80
GP + L+G GR+
Sbjct: 197 GERGGPRAQAVRRRLSALRGRGRR 220
Score = 28.1 bits (61), Expect = 4.8
Identities = 20/53 (37%), Positives = 23/53 (43%), Gaps = 6/53 (11%)
Query: 137 EGAGAGRGTPATMAGGEWAAEPLHLPQRGRRRRFTCRSGRPPRRGRGGGALGG 189
+G GAG G A GG ++ G GR RRGRGGG GG
Sbjct: 155 DGPGAGGGAEAQFLGGGRSSAG------GGGGGGGGGGGRGSRRGRGGGERGG 201
Score = 28.1 bits (61), Expect = 4.8
Identities = 23/71 (32%), Positives = 27/71 (38%), Gaps = 6/71 (8%)
Query: 129 SPRGAGWREGAGAGRGTPATMAGGEWAAEPLHLPQ------RGRRRRFTCRSGRPPRRGR 182
S G G G G GRG+ GGE + RGR RR + R + R
Sbjct: 174 SAGGGGGGGGGGGGRGSRRGRGGGERGGPRAQAVRRRLSALRGRGRRRRLKRLRRAQETR 233
Query: 183 GGGALGGASGS 193
G AL A S
Sbjct: 234 GAAALERACAS 244
Score = 27.3 bits (59), Expect = 8.3
Identities = 41/119 (34%), Positives = 45/119 (37%), Gaps = 35/119 (29%)
Query: 27 GPGGGEGAAAGGGGGGLGSGGRSAQRRAGAGARRPIGAAPSVGPGGELQGWGRKSGCRPP 86
GPG G GA A GGG RS+ AG G G GG G G + G R
Sbjct: 156 GPGAGGGAEAQFLGGG-----RSS---AGGGG----------GGGGGGGGRGSRRG-RGG 196
Query: 87 GPEGWAGGRKLRRWLPPRRFSNFCCRSPCAQTAVRRRR----RRAPSPRGAGWREGAGA 141
G G + +RR L R RRRR RRA RGA E A A
Sbjct: 197 GERGGPRAQAVRRRLSALRGRG------------RRRRLKRLRRAQETRGAAALERACA 243
>gi|25777671 protein phosphatase 1, regulatory subunit 10 [Homo
sapiens]
Length = 940
Score = 45.8 bits (107), Expect = 2e-05
Identities = 50/156 (32%), Positives = 55/156 (35%), Gaps = 26/156 (16%)
Query: 20 GDGDEAP--GPGGGEGAAAG-----GGGGGLGSGGRSAQ----RRAGAGARRP------- 61
G G P GPGGG G ++G G GGG+GSG R + G G RP
Sbjct: 747 GGGGHRPHEGPGGGMGNSSGHRPHEGPGGGMGSGHRPHEGPGGSMGGGGGHRPHEGPGGG 806
Query: 62 ----IGAAPSVGPGGELQGWGRKSGCRP-PGPEGWAGGRKLRRWLPPRRFSNFCCRSPCA 116
G P GPGG G G G RP GP G GG R P
Sbjct: 807 ISGGSGHRPHEGPGG---GMGAGGGHRPHEGPGGSMGGSGGHRPHEGPGHGGPHGHRPHD 863
Query: 117 QTAVRRRRRRAPSPRGAGWREGAGAGRGTPATMAGG 152
R R P P +G G G G GG
Sbjct: 864 VPGHRGHDHRGPPPHEHRGHDGPGHGGGGHRGHDGG 899
Score = 45.1 bits (105), Expect = 4e-05
Identities = 59/197 (29%), Positives = 65/197 (32%), Gaps = 37/197 (18%)
Query: 19 PGDGDEAPGPGGGEGAAAG---------GGGGGLGSGGRSAQRRAGAGARRPIGAAPSVG 69
PG G PGP GG G G GG G R G P+ P G
Sbjct: 645 PGPGGPMPGPHGGPGGPVGPRLLGPPPPPRGGDPFWDGPGDPMRGG-----PMRGGPGPG 699
Query: 70 PGGELQGWGRKSGCRPPGP----EGWAGGRKLRRWLPPRRFSNFCCRSPCAQTAVRRRRR 125
PG +G G + G PP P G GGR PP P R
Sbjct: 700 PGPYHRGRGGRGGNEPPPPPPPFRGARGGRS--GGGPPNGRG-----GPGGGMVGGGGHR 752
Query: 126 RAPSPRG-----AGWR--EGAGAGRGT---PATMAGGEWAAEPLHLPQRGRRRRFTCRSG 175
P G +G R EG G G G+ P GG H P G + SG
Sbjct: 753 PHEGPGGGMGNSSGHRPHEGPGGGMGSGHRPHEGPGGSMGGGGGHRPHEGPGGGISGGSG 812
Query: 176 RPPRRGRGGGALGGASG 192
P G GGG GA G
Sbjct: 813 HRPHEGPGGGM--GAGG 827
>gi|239754110 PREDICTED: hypothetical protein XP_002345881 [Homo
sapiens]
Length = 284
Score = 45.8 bits (107), Expect = 2e-05
Identities = 24/55 (43%), Positives = 27/55 (49%)
Query: 5 TQPARRLQPRKSSFPGDGDEAPGPGGGEGAAAGGGGGGLGSGGRSAQRRAGAGAR 59
T PA PG G A G G +A GGGGGG G GGR ++R G G R
Sbjct: 143 TLPAAAATTTALDGPGAGGGAERGGSGRSSAGGGGGGGGGGGGRGSRRGRGGGER 197
Score = 27.7 bits (60), Expect = 6.3
Identities = 19/60 (31%), Positives = 21/60 (35%), Gaps = 17/60 (28%)
Query: 130 PRGAGWREGAGAGRGTPATMAGGEWAAEPLHLPQRGRRRRFTCRSGRPPRRGRGGGALGG 189
P G E G+GR + GG GR RRGRGGG GG
Sbjct: 157 PGAGGGAERGGSGRSSAGGGGGGGGGG-----------------GGRGSRRGRGGGERGG 199
Score = 27.3 bits (59), Expect = 8.3
Identities = 33/102 (32%), Positives = 33/102 (32%), Gaps = 13/102 (12%)
Query: 48 RSAQRRAGAGARRPIGAAPSVGPGGELQGWGRKSGCRPPGPEGWAGGRKLRRWLPPRRFS 107
R A A A P G G E G GR S G G GGR RR
Sbjct: 139 RGAATLPAAAATTTALDGPGAGGGAERGGSGRSSAGGGGGGGGGGGGRGSRRGRGGGERG 198
Query: 108 NFCCRSPCAQTAVRR--------RRRRAPSPRGAGWREGAGA 141
P AQ RR RRRR R A GA A
Sbjct: 199 -----GPRAQAVRRRLSALRGRGRRRRLKRLRRAQETSGAAA 235
>gi|253970504 Ewing sarcoma breakpoint region 1 isoform 4 [Homo
sapiens]
Length = 600
Score = 45.4 bits (106), Expect = 3e-05
Identities = 54/180 (30%), Positives = 62/180 (34%), Gaps = 25/180 (13%)
Query: 19 PGDGDEAPGPGGGEGAAAGGGGGGLGSGGRSAQRRAGAGARRPIGAAPSVGPGGELQGWG 78
P +G P P G GG GG +G G R G R P G+ + GG +Q
Sbjct: 404 PREGRGMPPPLRGGPGGPGGPGGPMGRMGGRGGDRGGFPPRGPRGSRGNPSGGGNVQHRA 463
Query: 79 RKSGCRPPGPEGWAGGRKLRRWLPPRRFSNFCCRSPCAQTAVRRRRRRAPSPRGAGWREG 138
C PG G + NF R+ C Q + P P G
Sbjct: 464 GDWQCPNPG----CGNQ------------NFAWRTECNQCKAPKPEGFLPPPFPP---PG 504
Query: 139 AGAGRGTPATMAGGEWAAEPLHLPQ---RGRR--RRFTCRSGR-PPRRGRGGGALGGASG 192
GRG P M GG P RG R R R GR R G GGG GG G
Sbjct: 505 GDRGRGGPGGMRGGRGGLMDRGGPGGMFRGGRGGDRGGFRGGRGMDRGGFGGGRRGGPGG 564
Score = 32.7 bits (73), Expect = 0.20
Identities = 29/76 (38%), Positives = 31/76 (40%), Gaps = 3/76 (3%)
Query: 27 GPGGGEGAAAGGGGGGLGSGGRSAQRRAGAGARRPIGAAPSVGPGGELQGWGRKSGCRPP 86
GPGG GG GG GGR R G RR G GP E G GR+ G P
Sbjct: 527 GPGGMFRGGRGGDRGGF-RGGRGMDRGGFGGGRRG-GPGGPPGPLMEQMG-GRRGGRGGP 583
Query: 87 GPEGWAGGRKLRRWLP 102
G R+ RR P
Sbjct: 584 GKMDKGEHRQERRDRP 599
Score = 29.6 bits (65), Expect = 1.7
Identities = 23/73 (31%), Positives = 28/73 (38%), Gaps = 13/73 (17%)
Query: 17 SFPGDGDEAPGPGGGEGAAAGGGGGGLGSGGRSAQRRAGAGARRPIGAAPSVGPGGELQG 76
S PG+ GP G G GG GG S R G G G +G GE G
Sbjct: 230 SGPGENRSMSGPDN-----RGRGRGGFDRGGMS---RGGRG-----GGRGGMGSAGERGG 276
Query: 77 WGRKSGCRPPGPE 89
+ + G GP+
Sbjct: 277 FNKPGGPMDEGPD 289
>gi|253970502 Ewing sarcoma breakpoint region 1 isoform 3 [Homo
sapiens]
Length = 655
Score = 45.4 bits (106), Expect = 3e-05
Identities = 54/180 (30%), Positives = 62/180 (34%), Gaps = 25/180 (13%)
Query: 19 PGDGDEAPGPGGGEGAAAGGGGGGLGSGGRSAQRRAGAGARRPIGAAPSVGPGGELQGWG 78
P +G P P G GG GG +G G R G R P G+ + GG +Q
Sbjct: 459 PREGRGMPPPLRGGPGGPGGPGGPMGRMGGRGGDRGGFPPRGPRGSRGNPSGGGNVQHRA 518
Query: 79 RKSGCRPPGPEGWAGGRKLRRWLPPRRFSNFCCRSPCAQTAVRRRRRRAPSPRGAGWREG 138
C PG G + NF R+ C Q + P P G
Sbjct: 519 GDWQCPNPG----CGNQ------------NFAWRTECNQCKAPKPEGFLPPPFPP---PG 559
Query: 139 AGAGRGTPATMAGGEWAAEPLHLPQ---RGRR--RRFTCRSGR-PPRRGRGGGALGGASG 192
GRG P M GG P RG R R R GR R G GGG GG G
Sbjct: 560 GDRGRGGPGGMRGGRGGLMDRGGPGGMFRGGRGGDRGGFRGGRGMDRGGFGGGRRGGPGG 619
Score = 32.7 bits (73), Expect = 0.20
Identities = 29/76 (38%), Positives = 31/76 (40%), Gaps = 3/76 (3%)
Query: 27 GPGGGEGAAAGGGGGGLGSGGRSAQRRAGAGARRPIGAAPSVGPGGELQGWGRKSGCRPP 86
GPGG GG GG GGR R G RR G GP E G GR+ G P
Sbjct: 582 GPGGMFRGGRGGDRGGF-RGGRGMDRGGFGGGRRG-GPGGPPGPLMEQMG-GRRGGRGGP 638
Query: 87 GPEGWAGGRKLRRWLP 102
G R+ RR P
Sbjct: 639 GKMDKGEHRQERRDRP 654
Score = 27.3 bits (59), Expect = 8.3
Identities = 19/67 (28%), Positives = 25/67 (37%), Gaps = 16/67 (23%)
Query: 17 SFPGDGDEAPGP------------GGGEGAAAGGGGGGLGSGGRSAQRRAGAGARRPIGA 64
S PG+ GP GG GGG GG+G+G R + G P+
Sbjct: 286 SGPGENRSMSGPDNRGRGRGGFDRGGMSRGGRGGGRGGMGAGERGGFNKPGG----PMDE 341
Query: 65 APSVGPG 71
P + G
Sbjct: 342 GPDLDLG 348
>gi|253970500 Ewing sarcoma breakpoint region 1 isoform 1 [Homo
sapiens]
Length = 661
Score = 45.4 bits (106), Expect = 3e-05
Identities = 54/180 (30%), Positives = 62/180 (34%), Gaps = 25/180 (13%)
Query: 19 PGDGDEAPGPGGGEGAAAGGGGGGLGSGGRSAQRRAGAGARRPIGAAPSVGPGGELQGWG 78
P +G P P G GG GG +G G R G R P G+ + GG +Q
Sbjct: 465 PREGRGMPPPLRGGPGGPGGPGGPMGRMGGRGGDRGGFPPRGPRGSRGNPSGGGNVQHRA 524
Query: 79 RKSGCRPPGPEGWAGGRKLRRWLPPRRFSNFCCRSPCAQTAVRRRRRRAPSPRGAGWREG 138
C PG G + NF R+ C Q + P P G
Sbjct: 525 GDWQCPNPG----CGNQ------------NFAWRTECNQCKAPKPEGFLPPPFPP---PG 565
Query: 139 AGAGRGTPATMAGGEWAAEPLHLPQ---RGRR--RRFTCRSGR-PPRRGRGGGALGGASG 192
GRG P M GG P RG R R R GR R G GGG GG G
Sbjct: 566 GDRGRGGPGGMRGGRGGLMDRGGPGGMFRGGRGGDRGGFRGGRGMDRGGFGGGRRGGPGG 625
Score = 32.7 bits (73), Expect = 0.20
Identities = 29/76 (38%), Positives = 31/76 (40%), Gaps = 3/76 (3%)
Query: 27 GPGGGEGAAAGGGGGGLGSGGRSAQRRAGAGARRPIGAAPSVGPGGELQGWGRKSGCRPP 86
GPGG GG GG GGR R G RR G GP E G GR+ G P
Sbjct: 588 GPGGMFRGGRGGDRGGF-RGGRGMDRGGFGGGRRG-GPGGPPGPLMEQMG-GRRGGRGGP 644
Query: 87 GPEGWAGGRKLRRWLP 102
G R+ RR P
Sbjct: 645 GKMDKGEHRQERRDRP 660
Score = 27.3 bits (59), Expect = 8.3
Identities = 19/67 (28%), Positives = 25/67 (37%), Gaps = 16/67 (23%)
Query: 17 SFPGDGDEAPGP------------GGGEGAAAGGGGGGLGSGGRSAQRRAGAGARRPIGA 64
S PG+ GP GG GGG GG+G+G R + G P+
Sbjct: 292 SGPGENRSMSGPDNRGRGRGGFDRGGMSRGGRGGGRGGMGAGERGGFNKPGG----PMDE 347
Query: 65 APSVGPG 71
P + G
Sbjct: 348 GPDLDLG 354
>gi|4885225 Ewing sarcoma breakpoint region 1 isoform 2 [Homo
sapiens]
Length = 656
Score = 45.4 bits (106), Expect = 3e-05
Identities = 54/180 (30%), Positives = 62/180 (34%), Gaps = 25/180 (13%)
Query: 19 PGDGDEAPGPGGGEGAAAGGGGGGLGSGGRSAQRRAGAGARRPIGAAPSVGPGGELQGWG 78
P +G P P G GG GG +G G R G R P G+ + GG +Q
Sbjct: 460 PREGRGMPPPLRGGPGGPGGPGGPMGRMGGRGGDRGGFPPRGPRGSRGNPSGGGNVQHRA 519
Query: 79 RKSGCRPPGPEGWAGGRKLRRWLPPRRFSNFCCRSPCAQTAVRRRRRRAPSPRGAGWREG 138
C PG G + NF R+ C Q + P P G
Sbjct: 520 GDWQCPNPG----CGNQ------------NFAWRTECNQCKAPKPEGFLPPPFPP---PG 560
Query: 139 AGAGRGTPATMAGGEWAAEPLHLPQ---RGRR--RRFTCRSGR-PPRRGRGGGALGGASG 192
GRG P M GG P RG R R R GR R G GGG GG G
Sbjct: 561 GDRGRGGPGGMRGGRGGLMDRGGPGGMFRGGRGGDRGGFRGGRGMDRGGFGGGRRGGPGG 620
Score = 32.7 bits (73), Expect = 0.20
Identities = 29/76 (38%), Positives = 31/76 (40%), Gaps = 3/76 (3%)
Query: 27 GPGGGEGAAAGGGGGGLGSGGRSAQRRAGAGARRPIGAAPSVGPGGELQGWGRKSGCRPP 86
GPGG GG GG GGR R G RR G GP E G GR+ G P
Sbjct: 583 GPGGMFRGGRGGDRGGF-RGGRGMDRGGFGGGRRG-GPGGPPGPLMEQMG-GRRGGRGGP 639
Query: 87 GPEGWAGGRKLRRWLP 102
G R+ RR P
Sbjct: 640 GKMDKGEHRQERRDRP 655
Score = 29.6 bits (65), Expect = 1.7
Identities = 23/73 (31%), Positives = 28/73 (38%), Gaps = 13/73 (17%)
Query: 17 SFPGDGDEAPGPGGGEGAAAGGGGGGLGSGGRSAQRRAGAGARRPIGAAPSVGPGGELQG 76
S PG+ GP G G GG GG S R G G G +G GE G
Sbjct: 286 SGPGENRSMSGPDN-----RGRGRGGFDRGGMS---RGGRG-----GGRGGMGSAGERGG 332
Query: 77 WGRKSGCRPPGPE 89
+ + G GP+
Sbjct: 333 FNKPGGPMDEGPD 345
>gi|113412136 PREDICTED: hypothetical protein [Homo sapiens]
Length = 151
Score = 45.4 bits (106), Expect = 3e-05
Identities = 44/146 (30%), Positives = 55/146 (37%), Gaps = 8/146 (5%)
Query: 26 PGPGGGEGAAAGGGGGGLGSGGRSAQRRAGAGA---RRPIGAAPSVGPGGELQGWGRKSG 82
P PGG +G A GG G G ++RA GA RP G A S P L R G
Sbjct: 3 PSPGGKDGGAFIWGGARAGGGEALTRKRARGGAVPGDRPGGGAASPLPAPLLASRPRPRG 62
Query: 83 -CRPPGPEGWAGGRKLRRWLPPRRFSNFCCRSPCAQTAVRRRRRRAPSPRGAGWREGAGA 141
C P G + G +LRR RR + P AQ + AP+ A
Sbjct: 63 RCAPDGAQAGVGASRLRR----RRAPSGTLNGPYAQDKHGLNQVHAPAGDALTEVRTAVP 118
Query: 142 GRGTPATMAGGEWAAEPLHLPQRGRR 167
G+ P T+ P + R R
Sbjct: 119 GQVKPRTLGPKNLTGTPCLMKLRTAR 144
>gi|113408483 PREDICTED: hypothetical protein [Homo sapiens]
Length = 151
Score = 45.4 bits (106), Expect = 3e-05
Identities = 44/146 (30%), Positives = 55/146 (37%), Gaps = 8/146 (5%)
Query: 26 PGPGGGEGAAAGGGGGGLGSGGRSAQRRAGAGA---RRPIGAAPSVGPGGELQGWGRKSG 82
P PGG +G A GG G G ++RA GA RP G A S P L R G
Sbjct: 3 PSPGGKDGGAFIWGGARAGGGEALTRKRARGGAVPGDRPGGGAASPLPAPLLASRPRPRG 62
Query: 83 -CRPPGPEGWAGGRKLRRWLPPRRFSNFCCRSPCAQTAVRRRRRRAPSPRGAGWREGAGA 141
C P G + G +LRR RR + P AQ + AP+ A
Sbjct: 63 RCAPDGAQAGVGASRLRR----RRAPSGTLNGPYAQDKHGLNQVHAPAGDALTEVRTAVP 118
Query: 142 GRGTPATMAGGEWAAEPLHLPQRGRR 167
G+ P T+ P + R R
Sbjct: 119 GQVKPRTLGPKNLTGTPCLMKLRTAR 144
>gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo
sapiens]
Length = 2715
Score = 44.7 bits (104), Expect = 5e-05
Identities = 46/130 (35%), Positives = 49/130 (37%), Gaps = 41/130 (31%)
Query: 22 GDEAPGPGGGEGAAAG-----GGGGGLGSGGRSAQR-----RAGAGARRPIGAAPSVGPG 71
G PGPG G G GGGGG G G A+R R G GA P GA P
Sbjct: 7 GGSCPGPGSARGRFPGRPRGAGGGGGRGGRGNGAERVRVALRRGGGATGPGGAEP----- 61
Query: 72 GELQGWGRKSGCRPPGPEGWAGGRKLRR-WLPPRRFSNFCCRSPCAQTAVRRRRRRAPSP 130
GE R G R G R+LRR W PR V+R R R
Sbjct: 62 GEDTALLRLLGLR-------RGLRRLRRLWAGPR---------------VQRGRGRG--- 96
Query: 131 RGAGWREGAG 140
RG GW G
Sbjct: 97 RGRGWGPSRG 106
Score = 28.9 bits (63), Expect = 2.8
Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 6/30 (20%)
Query: 24 EAPGPG------GGEGAAAGGGGGGLGSGG 47
E PGPG GG+ + G GG G G GG
Sbjct: 270 EGPGPGPGTPRRGGQSSRGGRGGRGRGRGG 299
>gi|4758392 forkhead box D1 [Homo sapiens]
Length = 465
Score = 44.7 bits (104), Expect = 5e-05
Identities = 24/49 (48%), Positives = 29/49 (59%), Gaps = 4/49 (8%)
Query: 19 PGDGDEAP-GPGGGEGAAAGGGGGGLGSGGRSAQRRAGAGARRPIGAAP 66
P G AP GP GA AGGGGGG G+GG + AG+GA+ P+ P
Sbjct: 82 PAGGSPAPPGPAPAAGAGAGGGGGGGGAGGGGS---AGSGAKNPLVKPP 127
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.140 0.471
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,126,834
Number of Sequences: 37866
Number of extensions: 893371
Number of successful extensions: 20090
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 661
Number of HSP's successfully gapped in prelim test: 876
Number of HSP's that attempted gapping in prelim test: 7533
Number of HSP's gapped (non-prelim): 7380
length of query: 193
length of database: 18,247,518
effective HSP length: 97
effective length of query: 96
effective length of database: 14,574,516
effective search space: 1399153536
effective search space used: 1399153536
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.