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Search of human proteins with 169211489
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169211489 PREDICTED: hypothetical protein [Homo sapiens]
(176 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169211489 PREDICTED: hypothetical protein [Homo sapiens] 368 e-102
gi|169210715 PREDICTED: hypothetical protein [Homo sapiens] 364 e-101
gi|148806884 AKT1 substrate 1 (proline-rich) [Homo sapiens] 36 0.020
gi|148806906 AKT1 substrate 1 (proline-rich) [Homo sapiens] 36 0.020
gi|148806896 AKT1 substrate 1 (proline-rich) [Homo sapiens] 36 0.020
gi|148613882 homeobox A4 [Homo sapiens] 35 0.026
gi|67188550 CTD (carboxy-terminal domain, RNA polymerase II, pol... 35 0.044
gi|67188445 CTD (carboxy-terminal domain, RNA polymerase II, pol... 35 0.044
gi|169167066 PREDICTED: hypothetical protein [Homo sapiens] 34 0.075
gi|113416187 PREDICTED: hypothetical protein [Homo sapiens] 34 0.075
gi|113415691 PREDICTED: hypothetical protein [Homo sapiens] 34 0.075
gi|63055059 SH3 and PX domains 2B [Homo sapiens] 33 0.098
gi|169214772 PREDICTED: similar to hCG1783157 [Homo sapiens] 33 0.17
gi|239751973 PREDICTED: hypothetical protein XP_002348052 [Homo ... 33 0.17
gi|239746455 PREDICTED: hypothetical protein XP_002344215 [Homo ... 33 0.17
gi|142976757 immediate early response 5 [Homo sapiens] 32 0.37
gi|50843820 sickle tail isoform 1 [Homo sapiens] 32 0.37
gi|119508426 alpha 3 type IX collagen [Homo sapiens] 32 0.37
gi|197245386 hypothetical protein LOC387856 [Homo sapiens] 32 0.37
gi|239751929 PREDICTED: hypothetical protein [Homo sapiens] 31 0.63
gi|239746415 PREDICTED: hypothetical protein XP_002344217 [Homo ... 31 0.63
gi|209862893 zinc finger, MYND-type containing 15 isoform 1 [Hom... 31 0.63
gi|14149999 zinc finger, MYND-type containing 15 isoform 2 [Homo... 31 0.63
gi|151101384 coenzyme Q10 homolog A isoform a [Homo sapiens] 31 0.63
gi|14589893 cadherin 4, type 1 preproprotein [Homo sapiens] 30 0.83
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 30 1.1
gi|216548091 leucine zipper protein 1 [Homo sapiens] 30 1.1
gi|216548085 leucine zipper protein 1 [Homo sapiens] 30 1.1
gi|22027541 programmed cell death 7 [Homo sapiens] 30 1.1
gi|56117844 synovial sarcoma translocation, chromosome 18 isofor... 30 1.4
>gi|169211489 PREDICTED: hypothetical protein [Homo sapiens]
Length = 176
Score = 368 bits (944), Expect = e-102
Identities = 176/176 (100%), Positives = 176/176 (100%)
Query: 1 MSERKQQRPSTCPPGPAPSSPTVSRPFPETTRDAGDKDEGKESFPSPNGALILLPTLLVL 60
MSERKQQRPSTCPPGPAPSSPTVSRPFPETTRDAGDKDEGKESFPSPNGALILLPTLLVL
Sbjct: 1 MSERKQQRPSTCPPGPAPSSPTVSRPFPETTRDAGDKDEGKESFPSPNGALILLPTLLVL 60
Query: 61 DFSSFLKGQRVMKMDQDPPGEVKNMEWHHNQNRRGLRSEEPVTKLAYPEGTTRVGEPGGH 120
DFSSFLKGQRVMKMDQDPPGEVKNMEWHHNQNRRGLRSEEPVTKLAYPEGTTRVGEPGGH
Sbjct: 61 DFSSFLKGQRVMKMDQDPPGEVKNMEWHHNQNRRGLRSEEPVTKLAYPEGTTRVGEPGGH 120
Query: 121 PEASRPPAQPQTPGRVLRACSVLGRTPNSSQQEATPTELPGERCAQGGRLRDPEAA 176
PEASRPPAQPQTPGRVLRACSVLGRTPNSSQQEATPTELPGERCAQGGRLRDPEAA
Sbjct: 121 PEASRPPAQPQTPGRVLRACSVLGRTPNSSQQEATPTELPGERCAQGGRLRDPEAA 176
>gi|169210715 PREDICTED: hypothetical protein [Homo sapiens]
Length = 176
Score = 364 bits (934), Expect = e-101
Identities = 175/176 (99%), Positives = 175/176 (99%)
Query: 1 MSERKQQRPSTCPPGPAPSSPTVSRPFPETTRDAGDKDEGKESFPSPNGALILLPTLLVL 60
MSERKQQRPSTCPPGPAPSSPTVSRPFPETTRDAGDKDEGKESFPSPNGALILLPTLLVL
Sbjct: 1 MSERKQQRPSTCPPGPAPSSPTVSRPFPETTRDAGDKDEGKESFPSPNGALILLPTLLVL 60
Query: 61 DFSSFLKGQRVMKMDQDPPGEVKNMEWHHNQNRRGLRSEEPVTKLAYPEGTTRVGEPGGH 120
DFSSFLKGQRVMKMDQDPPGEVKNMEWHHNQNRRGLRSEEPVTKLAYPEGTTRVGEPGGH
Sbjct: 61 DFSSFLKGQRVMKMDQDPPGEVKNMEWHHNQNRRGLRSEEPVTKLAYPEGTTRVGEPGGH 120
Query: 121 PEASRPPAQPQTPGRVLRACSVLGRTPNSSQQEATPTELPGERCAQGGRLRDPEAA 176
PEASRPPAQPQTPGRVLRACSVLGRTPNSSQQEAT TELPGERCAQGGRLRDPEAA
Sbjct: 121 PEASRPPAQPQTPGRVLRACSVLGRTPNSSQQEATLTELPGERCAQGGRLRDPEAA 176
>gi|148806884 AKT1 substrate 1 (proline-rich) [Homo sapiens]
Length = 256
Score = 35.8 bits (81), Expect = 0.020
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 9/56 (16%)
Query: 8 RPSTCPPGPAPSSPTVSRPFPETTRDAGDKDE---------GKESFPSPNGALILL 54
RP PP P P SPT S P P R+ ++DE G++ S NG L ++
Sbjct: 76 RPPAPPPAPQPPSPTPSPPRPTLAREDNEEDEDEPTETETSGEQLGISDNGGLFVM 131
>gi|148806906 AKT1 substrate 1 (proline-rich) [Homo sapiens]
Length = 256
Score = 35.8 bits (81), Expect = 0.020
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 9/56 (16%)
Query: 8 RPSTCPPGPAPSSPTVSRPFPETTRDAGDKDE---------GKESFPSPNGALILL 54
RP PP P P SPT S P P R+ ++DE G++ S NG L ++
Sbjct: 76 RPPAPPPAPQPPSPTPSPPRPTLAREDNEEDEDEPTETETSGEQLGISDNGGLFVM 131
>gi|148806896 AKT1 substrate 1 (proline-rich) [Homo sapiens]
Length = 256
Score = 35.8 bits (81), Expect = 0.020
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 9/56 (16%)
Query: 8 RPSTCPPGPAPSSPTVSRPFPETTRDAGDKDE---------GKESFPSPNGALILL 54
RP PP P P SPT S P P R+ ++DE G++ S NG L ++
Sbjct: 76 RPPAPPPAPQPPSPTPSPPRPTLAREDNEEDEDEPTETETSGEQLGISDNGGLFVM 131
>gi|148613882 homeobox A4 [Homo sapiens]
Length = 320
Score = 35.4 bits (80), Expect = 0.026
Identities = 23/60 (38%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Query: 106 AYPEGTTRVGEPGGHPEASRPPAQPQTPGRVLRACSVL-GRTPNSSQQEATPTELPGERC 164
AYP G PG P+ +PPAQ + P L A VL + P Q A P P RC
Sbjct: 99 AYPYGYRGGASPGRPPQPEQPPAQAKGPAHGLHASHVLQPQLPPPLQPRAVPPAAP-RRC 157
>gi|67188550 CTD (carboxy-terminal domain, RNA polymerase II,
polypeptide A) phosphatase, subunit 1 isoform FCP1b
[Homo sapiens]
Length = 867
Score = 34.7 bits (78), Expect = 0.044
Identities = 32/107 (29%), Positives = 42/107 (39%), Gaps = 17/107 (15%)
Query: 78 PPGEVKNMEWHHNQNRRGLRSEEPVTKLAYPEGTTRVGEPGGHP--------------EA 123
PPG ++ + RG EP + PEG T+ PG P EA
Sbjct: 332 PPGSRESQTRKKVNHSRGTEVSEPSPPVRDPEGVTQA--PGVEPSNGLEKPARELNGSEA 389
Query: 124 SRPPAQPQTPGRVLRACSVLGRTPNSSQQEATPTELPGERCAQGGRL 170
+ P P+ R + P SSQ+ A E P CAQGGR+
Sbjct: 390 ATPRDSPRPGKPDERDIWPPAQAPTSSQELAGAPE-PQGSCAQGGRV 435
>gi|67188445 CTD (carboxy-terminal domain, RNA polymerase II,
polypeptide A) phosphatase, subunit 1 isoform FCP1a
[Homo sapiens]
Length = 961
Score = 34.7 bits (78), Expect = 0.044
Identities = 32/107 (29%), Positives = 42/107 (39%), Gaps = 17/107 (15%)
Query: 78 PPGEVKNMEWHHNQNRRGLRSEEPVTKLAYPEGTTRVGEPGGHP--------------EA 123
PPG ++ + RG EP + PEG T+ PG P EA
Sbjct: 332 PPGSRESQTRKKVNHSRGTEVSEPSPPVRDPEGVTQA--PGVEPSNGLEKPARELNGSEA 389
Query: 124 SRPPAQPQTPGRVLRACSVLGRTPNSSQQEATPTELPGERCAQGGRL 170
+ P P+ R + P SSQ+ A E P CAQGGR+
Sbjct: 390 ATPRDSPRPGKPDERDIWPPAQAPTSSQELAGAPE-PQGSCAQGGRV 435
>gi|169167066 PREDICTED: hypothetical protein [Homo sapiens]
Length = 262
Score = 33.9 bits (76), Expect = 0.075
Identities = 25/82 (30%), Positives = 32/82 (39%), Gaps = 5/82 (6%)
Query: 98 SEEPVTKLAYPEGTTRVGEPGGHPEASRPPAQPQTPG---RVLRACSVLGRTPNSSQQEA 154
S +P + GTT P P RPP P P R+LRACS+L P +
Sbjct: 16 SAQPPSSADTVPGTTYPPPPPPPPPTPRPPPPPPLPPPGPRLLRACSLL--LPTEPAPDL 73
Query: 155 TPTELPGERCAQGGRLRDPEAA 176
P R GR+ + A
Sbjct: 74 PPRRRSSSRSLARGRITQCQVA 95
>gi|113416187 PREDICTED: hypothetical protein [Homo sapiens]
Length = 262
Score = 33.9 bits (76), Expect = 0.075
Identities = 25/82 (30%), Positives = 32/82 (39%), Gaps = 5/82 (6%)
Query: 98 SEEPVTKLAYPEGTTRVGEPGGHPEASRPPAQPQTPG---RVLRACSVLGRTPNSSQQEA 154
S +P + GTT P P RPP P P R+LRACS+L P +
Sbjct: 16 SAQPPSSADTVPGTTYPPPPPPPPPTPRPPPPPPLPPPGPRLLRACSLL--LPTEPAPDL 73
Query: 155 TPTELPGERCAQGGRLRDPEAA 176
P R GR+ + A
Sbjct: 74 PPRRRSSSRSLARGRITQCQVA 95
>gi|113415691 PREDICTED: hypothetical protein [Homo sapiens]
Length = 262
Score = 33.9 bits (76), Expect = 0.075
Identities = 25/82 (30%), Positives = 32/82 (39%), Gaps = 5/82 (6%)
Query: 98 SEEPVTKLAYPEGTTRVGEPGGHPEASRPPAQPQTPG---RVLRACSVLGRTPNSSQQEA 154
S +P + GTT P P RPP P P R+LRACS+L P +
Sbjct: 16 SAQPPSSADTVPGTTYPPPPPPPPPTPRPPPPPPLPPPGPRLLRACSLL--LPTEPAPDL 73
Query: 155 TPTELPGERCAQGGRLRDPEAA 176
P R GR+ + A
Sbjct: 74 PPRRRSSSRSLARGRITQCQVA 95
>gi|63055059 SH3 and PX domains 2B [Homo sapiens]
Length = 911
Score = 33.5 bits (75), Expect = 0.098
Identities = 27/72 (37%), Positives = 33/72 (45%), Gaps = 6/72 (8%)
Query: 1 MSERKQQRPSTCPPGPAPSSPT--VSRPFPETTRDAGDKDEGKESFPSPN-GALILLPTL 57
+ E QQRP P P P T SRP PE G + EG ES +P G +L+P
Sbjct: 747 LQEAPQQRPVVPPRRPPPPKKTSSSSRPLPEV---RGPQCEGHESRAAPTPGRALLVPPK 803
Query: 58 LVLDFSSFLKGQ 69
S+ L GQ
Sbjct: 804 AKPFLSNSLGGQ 815
>gi|169214772 PREDICTED: similar to hCG1783157 [Homo sapiens]
Length = 538
Score = 32.7 bits (73), Expect = 0.17
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 5/89 (5%)
Query: 11 TCPPGPAPSSPTVSRPFPETTRDAGDKDEGKESFPSPNGALILLPTLLVLDFSSFLKGQR 70
TCPPGPA + T PF + E +E +P G L ++++L S +K
Sbjct: 216 TCPPGPAWGADT-RIPFEKLMEAVAHSPENREC--APYGEQASLASVIML--SCLMKTVL 270
Query: 71 VMKMDQDPPGEVKNMEWHHNQNRRGLRSE 99
+ K+++ + + +EW NQ L E
Sbjct: 271 LAKLNECSSLDSERIEWAINQEGASLPGE 299
>gi|239751973 PREDICTED: hypothetical protein XP_002348052 [Homo
sapiens]
Length = 537
Score = 32.7 bits (73), Expect = 0.17
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 5/89 (5%)
Query: 11 TCPPGPAPSSPTVSRPFPETTRDAGDKDEGKESFPSPNGALILLPTLLVLDFSSFLKGQR 70
TCPPGPA + T PF + E +E +P G L ++++L S +K
Sbjct: 216 TCPPGPAWGADT-RIPFEKLMEAVAHSPENREC--APYGEQASLASVIML--SCLMKTVL 270
Query: 71 VMKMDQDPPGEVKNMEWHHNQNRRGLRSE 99
+ K+++ + + +EW NQ L E
Sbjct: 271 LAKLNECSSLDSERIEWAINQEGASLPGE 299
>gi|239746455 PREDICTED: hypothetical protein XP_002344215 [Homo
sapiens]
Length = 537
Score = 32.7 bits (73), Expect = 0.17
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 5/89 (5%)
Query: 11 TCPPGPAPSSPTVSRPFPETTRDAGDKDEGKESFPSPNGALILLPTLLVLDFSSFLKGQR 70
TCPPGPA + T PF + E +E +P G L ++++L S +K
Sbjct: 216 TCPPGPAWGADT-RIPFEKLMEAVAHSPENREC--APYGEQASLASVIML--SCLMKTVL 270
Query: 71 VMKMDQDPPGEVKNMEWHHNQNRRGLRSE 99
+ K+++ + + +EW NQ L E
Sbjct: 271 LAKLNECSSLDSERIEWAINQEGASLPGE 299
>gi|142976757 immediate early response 5 [Homo sapiens]
Length = 327
Score = 31.6 bits (70), Expect = 0.37
Identities = 19/61 (31%), Positives = 23/61 (37%), Gaps = 2/61 (3%)
Query: 107 YPEGTTRVGEPGGHPEASRPPAQPQTPGRVLRACSVLGRTPNSSQQEATPTELPGERCAQ 166
+PE + P G P P P TP RA P + A P P +RCA
Sbjct: 165 FPEVSRAARRPCGCPLGGEDP--PGTPAATPRAACCCAPQPAEDEPPAPPAVCPRKRCAA 222
Query: 167 G 167
G
Sbjct: 223 G 223
>gi|50843820 sickle tail isoform 1 [Homo sapiens]
Length = 1943
Score = 31.6 bits (70), Expect = 0.37
Identities = 31/128 (24%), Positives = 49/128 (38%), Gaps = 9/128 (7%)
Query: 7 QRPSTCPPGPAPSSPTVSRPFPETTRDAGDKDEGKESFPSPNGALILLPTLLVLDFSS-- 64
Q +T P P+S P P TT + D++E +E L +D +S
Sbjct: 1093 QTRATKYPAEEPASAWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQAFQKCSFMDVNSNS 1152
Query: 65 FLKGQRVMKMDQD-------PPGEVKNMEWHHNQNRRGLRSEEPVTKLAYPEGTTRVGEP 117
+ R +D PP E KN+E+ H R+ E ++ + + TT P
Sbjct: 1153 HAEPSRADSHVKDTRSGATVPPKEKKNLEFFHEDVRKSDVEYENGPQMEFQKVTTGAVRP 1212
Query: 118 GGHPEASR 125
P+ R
Sbjct: 1213 SDPPKWER 1220
>gi|119508426 alpha 3 type IX collagen [Homo sapiens]
Length = 684
Score = 31.6 bits (70), Expect = 0.37
Identities = 35/137 (25%), Positives = 49/137 (35%), Gaps = 12/137 (8%)
Query: 7 QRPSTCPPGP--APSSPTVSRPFPETTRDAGDKDEGKESFPSPNGALILLPTLLVLDFSS 64
Q PS CPPGP P P P +G++ P P G LP + L
Sbjct: 173 QCPSICPPGPPGPPGMPGFKGPTGYKGEQGEVGKDGEKGDPGPPGP-AGLPGSVGLQGP- 230
Query: 65 FLKGQRVMKMDQDPPGEVKNMEWH------HNQNRRGLRSEEPVTKLAYPEGTTRVGEPG 118
+G R + PPG+ + + + G R E P+G P
Sbjct: 231 --RGLRGLPGPLGPPGDRGPIGFRGPPGIPGAPGKAGDRGERGPEGFRGPKGDLGRPGPK 288
Query: 119 GHPEASRPPAQPQTPGR 135
G P + P +P PG+
Sbjct: 289 GTPGVAGPSGEPGMPGK 305
>gi|197245386 hypothetical protein LOC387856 [Homo sapiens]
Length = 194
Score = 31.6 bits (70), Expect = 0.37
Identities = 14/47 (29%), Positives = 22/47 (46%)
Query: 114 VGEPGGHPEASRPPAQPQTPGRVLRACSVLGRTPNSSQQEATPTELP 160
+G GG P +P+TP + +LGR P ++E E+P
Sbjct: 102 LGVVGGKGSFQSDPQEPETPSPGIGDSGLLGRDPEDEEEEEEEKEMP 148
>gi|239751929 PREDICTED: hypothetical protein [Homo sapiens]
Length = 382
Score = 30.8 bits (68), Expect = 0.63
Identities = 28/106 (26%), Positives = 33/106 (31%), Gaps = 27/106 (25%)
Query: 79 PGEVKNMEWHHNQNRRGLRSEEPVTKLAYPEGTTRVGEPGGHPEASRPPAQPQTPGRVLR 138
P + + H + RRG R P P G PGG A P TP
Sbjct: 69 PAQRSSCTQPHRRRRRGTRRLPPALT---PAGPYHSARPGGGARARAARVSPPTP----- 120
Query: 139 ACSVLGRTPNSSQQEATPTELP-----------GERCAQGGRLRDP 173
P S A P+ P G R + GGRL P
Sbjct: 121 --------PRSGLDPAVPSPTPAPLARCRQTRAGLRLSTGGRLSPP 158
>gi|239746415 PREDICTED: hypothetical protein XP_002344217 [Homo
sapiens]
Length = 382
Score = 30.8 bits (68), Expect = 0.63
Identities = 28/106 (26%), Positives = 33/106 (31%), Gaps = 27/106 (25%)
Query: 79 PGEVKNMEWHHNQNRRGLRSEEPVTKLAYPEGTTRVGEPGGHPEASRPPAQPQTPGRVLR 138
P + + H + RRG R P P G PGG A P TP
Sbjct: 69 PAQRSSCTQPHRRRRRGTRRLPPALT---PAGPYHSARPGGGARARAARVSPPTP----- 120
Query: 139 ACSVLGRTPNSSQQEATPTELP-----------GERCAQGGRLRDP 173
P S A P+ P G R + GGRL P
Sbjct: 121 --------PRSGLDPAVPSPTPAPLARCRQTRAGLRLSTGGRLSPP 158
>gi|209862893 zinc finger, MYND-type containing 15 isoform 1 [Homo
sapiens]
Length = 742
Score = 30.8 bits (68), Expect = 0.63
Identities = 14/28 (50%), Positives = 16/28 (57%)
Query: 14 PGPAPSSPTVSRPFPETTRDAGDKDEGK 41
PGP P SPT S P T R G+K G+
Sbjct: 709 PGPPPPSPTPSAPPAPTRRRRGEKKPGR 736
>gi|14149999 zinc finger, MYND-type containing 15 isoform 2 [Homo
sapiens]
Length = 703
Score = 30.8 bits (68), Expect = 0.63
Identities = 14/28 (50%), Positives = 16/28 (57%)
Query: 14 PGPAPSSPTVSRPFPETTRDAGDKDEGK 41
PGP P SPT S P T R G+K G+
Sbjct: 670 PGPPPPSPTPSAPPAPTRRRRGEKKPGR 697
>gi|151101384 coenzyme Q10 homolog A isoform a [Homo sapiens]
Length = 247
Score = 30.8 bits (68), Expect = 0.63
Identities = 22/68 (32%), Positives = 26/68 (38%), Gaps = 10/68 (14%)
Query: 108 PEGTTRVGE--------PGGHPEASRPPAQPQTPGRVLRACSVLGRTPNSSQQEATPTEL 159
P GT E PG P P P P R L +CS+L P ++Q A L
Sbjct: 10 PAGTRAAAERCCRLSLSPGAQPAPPPGPLPPPRPMRFLTSCSLL--LPRAAQILAAEAGL 67
Query: 160 PGERCAQG 167
P R G
Sbjct: 68 PSSRSFMG 75
>gi|14589893 cadherin 4, type 1 preproprotein [Homo sapiens]
Length = 916
Score = 30.4 bits (67), Expect = 0.83
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 67 KGQRVMKMDQDPPGEVKNMEWHHNQNRRGLR 97
KG++V+ +D PP + + W +QN GLR
Sbjct: 135 KGKKVVALDPSPPPKDTLLPWPQHQNANGLR 165
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 30.0 bits (66), Expect = 1.1
Identities = 24/79 (30%), Positives = 31/79 (39%), Gaps = 4/79 (5%)
Query: 95 GLRSEEPVTKLAYPEGTTRVGEPGGHPEASRPPAQPQTPGRVLRACSVLGRTPNSSQQEA 154
G R + P +L P G G G + PP+ PQ P R + S + P +Q
Sbjct: 4280 GPRPQGP-PRLPAPPGALSTGPVLGPVHPTPPPSSPQEPKRPSQLPSPSSQLPTEAQ--- 4335
Query: 155 TPTELPGERCAQGGRLRDP 173
P PG QG L P
Sbjct: 4336 LPPTHPGTPKPQGPTLEPP 4354
>gi|216548091 leucine zipper protein 1 [Homo sapiens]
Length = 1076
Score = 30.0 bits (66), Expect = 1.1
Identities = 34/108 (31%), Positives = 48/108 (44%), Gaps = 11/108 (10%)
Query: 67 KGQRVMKMDQDPPGEV-KNMEWHHNQNRRGLRSEEPVTKLAYP------EGTTRVGEPGG 119
K +R +K +DPP + KN+E N N RS ++L P +GT RVG G
Sbjct: 925 KSRRDLKSLEDPPTRIGKNVE-STNSNAYTQRSSTDFSELEQPRSCLFEQGTRRVGPSSG 983
Query: 120 H-PE-ASRPPAQPQTPGRVLRACSVLGRTPN-SSQQEATPTELPGERC 164
PE +SR T VL + +G T ++ + E GE C
Sbjct: 984 DAPEPSSRRTQSSLTVSEVLTRRNRVGDTITVAAWNHSASMEEEGEDC 1031
>gi|216548085 leucine zipper protein 1 [Homo sapiens]
Length = 1076
Score = 30.0 bits (66), Expect = 1.1
Identities = 34/108 (31%), Positives = 48/108 (44%), Gaps = 11/108 (10%)
Query: 67 KGQRVMKMDQDPPGEV-KNMEWHHNQNRRGLRSEEPVTKLAYP------EGTTRVGEPGG 119
K +R +K +DPP + KN+E N N RS ++L P +GT RVG G
Sbjct: 925 KSRRDLKSLEDPPTRIGKNVE-STNSNAYTQRSSTDFSELEQPRSCLFEQGTRRVGPSSG 983
Query: 120 H-PE-ASRPPAQPQTPGRVLRACSVLGRTPN-SSQQEATPTELPGERC 164
PE +SR T VL + +G T ++ + E GE C
Sbjct: 984 DAPEPSSRRTQSSLTVSEVLTRRNRVGDTITVAAWNHSASMEEEGEDC 1031
>gi|22027541 programmed cell death 7 [Homo sapiens]
Length = 485
Score = 30.0 bits (66), Expect = 1.1
Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Query: 13 PPGPAPSSPTVSRPFPETTRDAGDKDEGKESFPSP 47
PP P P P RPFP T DAG++ P P
Sbjct: 84 PPPPLPPPPPQCRPFPGT--DAGERPRPPPPGPGP 116
>gi|56117844 synovial sarcoma translocation, chromosome 18 isoform 2
[Homo sapiens]
Length = 387
Score = 29.6 bits (65), Expect = 1.4
Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 7/67 (10%)
Query: 76 QDPPGEVKNMEWHHNQ--NRRGLRSEEPVTKLAYPEGTTRVGEP-----GGHPEASRPPA 128
Q PP + E ++ + G E + + YP+G ++ G+ G P+ PP
Sbjct: 258 QGPPQQYSGQEDYYGDQYSHGGQGPPEGMNQQYYPDGNSQYGQQQDAYQGPPPQQGYPPQ 317
Query: 129 QPQTPGR 135
Q Q PG+
Sbjct: 318 QQQYPGQ 324
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.310 0.131 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,142,615
Number of Sequences: 37866
Number of extensions: 608826
Number of successful extensions: 3565
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 128
Number of HSP's that attempted gapping in prelim test: 3375
Number of HSP's gapped (non-prelim): 333
length of query: 176
length of database: 18,247,518
effective HSP length: 95
effective length of query: 81
effective length of database: 14,650,248
effective search space: 1186670088
effective search space used: 1186670088
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.