Guide to the Human Genome
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Name: COQ10A Sequence: fasta or formatted (247aa) NCBI GI: 151101384
Description:

coenzyme Q10 homolog A isoform a

Referenced in:

Oxidative Phosphorylation

Other entries for this name:
alt prot [215aa] coenzyme Q10 homolog A isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.5         26           3
 C cysteine            2.4          6           2
 D aspartate           1.2          3           1
 E glutamate           6.5         16           1
 F phenylalanine       6.5         16           2
 G glycine             4.9         12           1
 H histidine           2.4          6           1
 I isoleucine          2.4          6           1
 K lysine              4.5         11           2
 L leucine             7.3         18           3
 M methionine          4.5         11           1
 N asparagine          1.6          4           1
 P proline             9.3         23           3
 Q glutamine           3.2          8           1
 R arginine            8.5         21           2
 S serine              8.5         21           2
 T threonine           4.9         12           1
 V valine              7.3         18           2
 W tryptophan          1.2          3           1
 Y tyrosine            2.4          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   coenzyme Q10 homolog A isoform a 
COQ10A                0.800   coenzyme Q10 homolog A isoform b 
COQ10B                0.574   coenzyme Q10 homolog B 
FOXK1                 0.035   forkhead box K1 
MAPK7                 0.033   mitogen-activated protein kinase 7 isoform 1 
MAPK7                 0.033   mitogen-activated protein kinase 7 isoform 1 
MAPK7                 0.033   mitogen-activated protein kinase 7 isoform 1 
MAPK7                 0.033   mitogen-activated protein kinase 7 isoform 2 
FLJ20021              0.027   PREDICTED: hypothetical protein 
FLJ20021              0.027   PREDICTED: hypothetical protein 
FLJ20021              0.027   PREDICTED: hypothetical protein 
WHAMM                 0.025   WAS protein homolog associated with actin, golgi me...
CRKRS                 0.023   Cdc2-related kinase, arginine/serine-rich isoform 1...
BPTF                  0.021   bromodomain PHD finger transcription factor isoform ...
BPTF                  0.021   bromodomain PHD finger transcription factor isoform ...
MLL4                  0.019   myeloid/lymphoid or mixed-lineage leukemia 4 
SAMD1                 0.019   sterile alpha motif domain containing 1 
PRR12                 0.019   proline rich 12 
MN1                   0.017   meningioma  1 
GABBR2                0.017   G protein-coupled receptor 51 
SYNPO                 0.017   synaptopodin isoform A 
HMX1                  0.017   homeo box (H6 family) 1 
ZC3H13                0.017   zinc finger CCCH-type containing 13 
LOC645529             0.017   PREDICTED: similar to Putative acrosin-like proteas...
ACR                   0.017   acrosin precursor 
FOXD2                 0.017   forkhead box D2 
HCN2                  0.015   hyperpolarization activated cyclic nucleotide-gated...
WIPF1                 0.015   WAS/WASL interacting protein family, member 1 [Homo...
WIPF1                 0.015   WAS/WASL interacting protein family, member 1 
TAF3                  0.015   RNA polymerase II transcription factor TAFII140 [Ho...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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