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Search of human proteins with 169209862
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169209862 PREDICTED: similar to TP53 target 3 isoform 3
[Homo sapiens]
(167 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169209862 PREDICTED: similar to TP53 target 3 isoform 3 [Homo... 355 1e-98
gi|239745531 PREDICTED: similar to TP53 target 3 isoform 1 [Homo... 264 3e-71
gi|153791741 hypothetical protein LOC729355 [Homo sapiens] 259 1e-69
gi|7706743 TP53 target 3 [Homo sapiens] 259 1e-69
gi|169209864 PREDICTED: similar to TP53 target 3 isoform 2 [Homo... 174 3e-44
gi|27502386 nuclear factor of activated T-cells, cytosolic compo... 35 0.039
gi|169202626 PREDICTED: similar to mucin 5, partial [Homo sapiens] 34 0.067
gi|239751430 PREDICTED: hypothetical protein [Homo sapiens] 33 0.11
gi|239745934 PREDICTED: hypothetical protein XP_002343619 [Homo ... 33 0.11
gi|28973785 forkhead box S1 [Homo sapiens] 32 0.19
gi|6912446 potassium voltage-gated channel, subfamily H, member ... 32 0.25
gi|51702222 SPT2, Suppressor of Ty, domain containing 1 [Homo sa... 32 0.25
gi|239751469 PREDICTED: hypothetical protein [Homo sapiens] 31 0.43
gi|169161777 PREDICTED: hypothetical protein [Homo sapiens] 31 0.56
gi|169161622 PREDICTED: hypothetical protein [Homo sapiens] 31 0.56
gi|169162826 PREDICTED: hypothetical protein [Homo sapiens] 31 0.56
gi|224465184 nuclear factor I/A isoform 4 [Homo sapiens] 30 0.74
gi|224465182 nuclear factor I/A isoform 3 [Homo sapiens] 30 0.74
gi|197927284 nuclear factor I/A isoform 1 [Homo sapiens] 30 0.74
gi|19718780 semaphorin 6B precursor [Homo sapiens] 30 0.74
gi|239756560 PREDICTED: hypothetical protein [Homo sapiens] 30 0.96
gi|239745525 PREDICTED: hypothetical protein [Homo sapiens] 30 0.96
gi|237512940 early growth response 4 [Homo sapiens] 30 0.96
gi|122937321 UNC homeobox [Homo sapiens] 30 0.96
gi|56790299 pleckstrin and Sec7 domain containing [Homo sapiens] 30 0.96
gi|169178932 PREDICTED: hypothetical protein [Homo sapiens] 30 1.3
gi|169172282 PREDICTED: similar to hCG1818014 [Homo sapiens] 30 1.3
gi|169176343 PREDICTED: hypothetical protein [Homo sapiens] 30 1.3
gi|157738639 tensin 4 [Homo sapiens] 30 1.3
gi|154800457 centrosomal protein 68kDa [Homo sapiens] 30 1.3
>gi|169209862 PREDICTED: similar to TP53 target 3 isoform 3 [Homo
sapiens]
Length = 167
Score = 355 bits (910), Expect = 1e-98
Identities = 167/167 (100%), Positives = 167/167 (100%)
Query: 1 MRASPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPC 60
MRASPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPC
Sbjct: 1 MRASPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPC 60
Query: 61 CFQISPAEETLELGRLVSPGNCDTLSPRAAGFYACHVRSLIPCRSTKGRWPLTASAAGLS 120
CFQISPAEETLELGRLVSPGNCDTLSPRAAGFYACHVRSLIPCRSTKGRWPLTASAAGLS
Sbjct: 61 CFQISPAEETLELGRLVSPGNCDTLSPRAAGFYACHVRSLIPCRSTKGRWPLTASAAGLS 120
Query: 121 RLSQILCTPGAPLGPPGSLRGPYLGRASHGDFPTSVIKRRKRHSGRA 167
RLSQILCTPGAPLGPPGSLRGPYLGRASHGDFPTSVIKRRKRHSGRA
Sbjct: 121 RLSQILCTPGAPLGPPGSLRGPYLGRASHGDFPTSVIKRRKRHSGRA 167
>gi|239745531 PREDICTED: similar to TP53 target 3 isoform 1 [Homo
sapiens]
Length = 132
Score = 264 bits (674), Expect = 3e-71
Identities = 126/134 (94%), Positives = 127/134 (94%), Gaps = 2/134 (1%)
Query: 1 MRASPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPC 60
MRASPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPC
Sbjct: 1 MRASPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPC 60
Query: 61 CFQISPAEETLELGRLVSPGNCDTLSPRAAGFYACHVRSLIPCRSTKGRWPLTASAAGLS 120
CFQISPAEETLELGRLVSPGNCDTLSPRAAGFYACHVRSLIPCRSTKGRWPLTASAAGLS
Sbjct: 61 CFQISPAEETLELGRLVSPGNCDTLSPRAAGFYACHVRSLIPCRSTKGRWPLTASAAGLS 120
Query: 121 RLSQILCTPGAPLG 134
R +Q C P LG
Sbjct: 121 RHAQ--CGPSLGLG 132
>gi|153791741 hypothetical protein LOC729355 [Homo sapiens]
Length = 124
Score = 259 bits (661), Expect = 1e-69
Identities = 121/123 (98%), Positives = 121/123 (98%)
Query: 1 MRASPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPC 60
MRASPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPC
Sbjct: 1 MRASPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPC 60
Query: 61 CFQISPAEETLELGRLVSPGNCDTLSPRAAGFYACHVRSLIPCRSTKGRWPLTASAAGLS 120
CFQISPAEETLELGRLVSPGNCDTLSPRAAGFYACHVRSLIPCRSTKGRWPLTASAAGLS
Sbjct: 61 CFQISPAEETLELGRLVSPGNCDTLSPRAAGFYACHVRSLIPCRSTKGRWPLTASAAGLS 120
Query: 121 RLS 123
S
Sbjct: 121 SFS 123
>gi|7706743 TP53 target 3 [Homo sapiens]
Length = 124
Score = 259 bits (661), Expect = 1e-69
Identities = 121/123 (98%), Positives = 121/123 (98%)
Query: 1 MRASPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPC 60
MRASPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPC
Sbjct: 1 MRASPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPC 60
Query: 61 CFQISPAEETLELGRLVSPGNCDTLSPRAAGFYACHVRSLIPCRSTKGRWPLTASAAGLS 120
CFQISPAEETLELGRLVSPGNCDTLSPRAAGFYACHVRSLIPCRSTKGRWPLTASAAGLS
Sbjct: 61 CFQISPAEETLELGRLVSPGNCDTLSPRAAGFYACHVRSLIPCRSTKGRWPLTASAAGLS 120
Query: 121 RLS 123
S
Sbjct: 121 SFS 123
>gi|169209864 PREDICTED: similar to TP53 target 3 isoform 2 [Homo
sapiens]
Length = 102
Score = 174 bits (441), Expect = 3e-44
Identities = 81/88 (92%), Positives = 84/88 (95%)
Query: 1 MRASPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPC 60
MRASPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPC
Sbjct: 1 MRASPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPC 60
Query: 61 CFQISPAEETLELGRLVSPGNCDTLSPR 88
CFQISPAEETLELGRLVSPG + +P+
Sbjct: 61 CFQISPAEETLELGRLVSPGCHKSSAPQ 88
>gi|27502386 nuclear factor of activated T-cells, cytosolic
component 1 isoform C [Homo sapiens]
Length = 930
Score = 34.7 bits (78), Expect = 0.039
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Query: 5 PCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPCCFQ- 63
P + P + P P+ L + P + P +E CP+ SP + P +EP C Q
Sbjct: 793 PVATHPGSPGQPPPALLPQQVSAPPSSSCPPGLEHSL--CPSSPSPPLPPATQEPTCLQP 850
Query: 64 ISPA 67
SPA
Sbjct: 851 CSPA 854
>gi|169202626 PREDICTED: similar to mucin 5, partial [Homo sapiens]
Length = 2013
Score = 33.9 bits (76), Expect = 0.067
Identities = 33/103 (32%), Positives = 44/103 (42%), Gaps = 15/103 (14%)
Query: 4 SPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPCCFQ 63
+P +A P SA TAG+ P TR P SA P CGE+ C +
Sbjct: 1343 TPSNGPSSAHTGPPSSAWPTTAGTSPRTRLP----TASASLPPV-------CGEK-CLW- 1389
Query: 64 ISPAEETLELGRLVSPGNCDTL-SPRAAGFYACHVRSLIPCRS 105
SP + GR G+ DTL + RA G+ C + CR+
Sbjct: 1390 -SPWMDVSRPGRGTDSGDFDTLENLRAHGYRVCESPRSVECRA 1431
Score = 28.1 bits (61), Expect = 3.7
Identities = 27/95 (28%), Positives = 40/95 (42%), Gaps = 13/95 (13%)
Query: 16 PRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPCCFQISPAEETLELGR 75
P P + T+ S T TPGT S P P+ S C +E C + E ++ G
Sbjct: 1540 PSPPPVPATSTSSMSTTTPGTSVVSSK--PTLTEPSTSSCLQELCTW-----TEWID-GS 1591
Query: 76 LVSP----GNCDTL-SPRAAGFYACHVRSLIPCRS 105
+P G+ DT + R G+ C + CR+
Sbjct: 1592 YPAPGINGGDFDTFQNLRDEGYTFCESPRSVQCRA 1626
>gi|239751430 PREDICTED: hypothetical protein [Homo sapiens]
Length = 303
Score = 33.1 bits (74), Expect = 0.11
Identities = 45/176 (25%), Positives = 55/176 (31%), Gaps = 28/176 (15%)
Query: 10 PAASWHPRPSALRPT-----------------------AGSGPDTRTPGTVEDGS-APCP 45
P ASW P RPT +GP P + A CP
Sbjct: 110 PPASWAPPQPGRRPTCPGCCRGAASGAPRWVRTWAAAAVAAGPGRSAPQREPRAAWAACP 169
Query: 46 AFRSPAVSPCGEEPCCFQISPAEETLELGRLVSPGNCDTLSPRAAGFYACH-VRSLIPCR 104
A S A P C P E + A G +A H L R
Sbjct: 170 AGPSSAAGPERGHVSCAADEPGTERSGAAAARGSAGASSRGRGALGAWARHSAVRLDSGR 229
Query: 105 STKGRWPLTASAAGLSRLSQILCTPGAPLGPPGSLRGPYLGRASHGD-FPTSVIKR 159
+G+ P AA R +Q+ P + SLRGP G S D P S + R
Sbjct: 230 GWRGKTPGAGGAA--ERGAQLAKCPASKAFGDQSLRGPLAGAQSRPDLLPASPLSR 283
>gi|239745934 PREDICTED: hypothetical protein XP_002343619 [Homo
sapiens]
Length = 303
Score = 33.1 bits (74), Expect = 0.11
Identities = 45/176 (25%), Positives = 55/176 (31%), Gaps = 28/176 (15%)
Query: 10 PAASWHPRPSALRPT-----------------------AGSGPDTRTPGTVEDGS-APCP 45
P ASW P RPT +GP P + A CP
Sbjct: 110 PPASWAPPQPGRRPTCPGCCRGAASGAPRWVRTWAAAAVAAGPGRSAPQREPRAAWAACP 169
Query: 46 AFRSPAVSPCGEEPCCFQISPAEETLELGRLVSPGNCDTLSPRAAGFYACH-VRSLIPCR 104
A S A P C P E + A G +A H L R
Sbjct: 170 AGPSSAAGPERGHVSCAADEPGTERSGAAAARGSAGASSRGRGALGAWARHSAVRLDSGR 229
Query: 105 STKGRWPLTASAAGLSRLSQILCTPGAPLGPPGSLRGPYLGRASHGD-FPTSVIKR 159
+G+ P AA R +Q+ P + SLRGP G S D P S + R
Sbjct: 230 GWRGKTPGAGGAA--ERGAQLAKCPASKAFGDQSLRGPLAGAQSRPDLLPASPLSR 283
>gi|28973785 forkhead box S1 [Homo sapiens]
Length = 330
Score = 32.3 bits (72), Expect = 0.19
Identities = 43/145 (29%), Positives = 52/145 (35%), Gaps = 33/145 (22%)
Query: 3 ASPCISQPAAS-WHPRPSALRPTAGSGPDTRTPGT--VEDGSAPCPAFRSPAVSPCGEEP 59
A P PA + PRP + P S P PG V S+ CPAF PA
Sbjct: 172 AMPASMCPATTDGRPRPP-MEPKEISTPKPACPGELPVATSSSSCPAFGFPA-------- 222
Query: 60 CCFQISPAEETLELGRLVSPGNCDTLSPRAA--GFYACHVRSLIPCRSTKGRWPLTASAA 117
S AE + +P LSP + Y C +++L C
Sbjct: 223 ---GFSEAES---FNKAPTP----VLSPESGIGSSYQCRLQALNFCMGAD---------P 263
Query: 118 GLSRLSQILCTPGAPLGPPGSLRGP 142
GL L AP PPGSLR P
Sbjct: 264 GLEHLLASAAPSPAPPTPPGSLRAP 288
>gi|6912446 potassium voltage-gated channel, subfamily H, member 4
[Homo sapiens]
Length = 1017
Score = 32.0 bits (71), Expect = 0.25
Identities = 17/63 (26%), Positives = 24/63 (38%), Gaps = 5/63 (7%)
Query: 28 GPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPCCFQISPAEETLELGRLVSPGNCDTLSP 87
GP G+ PCP R P +SPC P P+ + L + P + T+
Sbjct: 913 GPPGHPAGSAWTPDPPCPQLRPPCLSPCASRP-----PPSLQDTTLAEVHCPASVGTMET 967
Query: 88 RAA 90
A
Sbjct: 968 GTA 970
>gi|51702222 SPT2, Suppressor of Ty, domain containing 1 [Homo
sapiens]
Length = 685
Score = 32.0 bits (71), Expect = 0.25
Identities = 44/156 (28%), Positives = 61/156 (39%), Gaps = 25/156 (16%)
Query: 4 SPCISQPAAS-----WHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEE 58
SP + QP +S P RPT SGP R ++GS+ P S G +
Sbjct: 365 SPGVRQPGSSSSSAPGQPSTGVARPTVSSGPVPRR----QNGSSS----SGPERSISGSK 416
Query: 59 PCCFQISPAEETLELGRLVSPGNCDTLSPRAAGFYACHVRSLIPCRSTKGRWPLTASAAG 118
+P+ T + PG + S + V S P S++G +S
Sbjct: 417 KPTNDSNPSRRT--VSGTCGPGQPASSSGGPGRPISGSVSSARPLGSSRGPGRPVSSPHE 474
Query: 119 LSRLSQILCTPGAPLGPPG-SLRGPYLGRASHGDFP 153
L R P + LGPPG S+ GP GR+ G P
Sbjct: 475 LRR-------PVSGLGPPGRSVSGP--GRSISGSIP 501
>gi|239751469 PREDICTED: hypothetical protein [Homo sapiens]
Length = 278
Score = 31.2 bits (69), Expect = 0.43
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Query: 98 RSLIPCRSTKGRWPLTASAAGLSRLSQILCTPGAPLGPPGSLRG 141
+SL+ C+ TKG W + S + S C+P P+ P S+ G
Sbjct: 3 QSLLGCQRTKGSWEMLPSGWAMGHPS---CSPRTPVPPMSSIPG 43
>gi|169161777 PREDICTED: hypothetical protein [Homo sapiens]
Length = 190
Score = 30.8 bits (68), Expect = 0.56
Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 4/91 (4%)
Query: 4 SPCISQPAASWHPRPSALRPTAGSGPDTRTPGT----VEDGSAPCPAFRSPAVSPCGEEP 59
SP +S S + A PT D+ PG + G+A P ++ V
Sbjct: 83 SPSLSLTPGSGSEKREAGGPTGPKREDSALPGASTSHLPAGTADPPPPQAGLVRDSRAGQ 142
Query: 60 CCFQISPAEETLELGRLVSPGNCDTLSPRAA 90
Q +P + +ELG V G+C +L P+ A
Sbjct: 143 TAVQTAPWQVGVELGVWVGLGSCGSLRPQLA 173
>gi|169161622 PREDICTED: hypothetical protein [Homo sapiens]
Length = 190
Score = 30.8 bits (68), Expect = 0.56
Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 4/91 (4%)
Query: 4 SPCISQPAASWHPRPSALRPTAGSGPDTRTPGT----VEDGSAPCPAFRSPAVSPCGEEP 59
SP +S S + A PT D+ PG + G+A P ++ V
Sbjct: 83 SPSLSLTPGSGSEKREAGGPTGPKREDSALPGASTSHLPAGTADPPPPQAGLVRDSRAGQ 142
Query: 60 CCFQISPAEETLELGRLVSPGNCDTLSPRAA 90
Q +P + +ELG V G+C +L P+ A
Sbjct: 143 TAVQTAPWQVGVELGVWVGLGSCGSLRPQLA 173
>gi|169162826 PREDICTED: hypothetical protein [Homo sapiens]
Length = 190
Score = 30.8 bits (68), Expect = 0.56
Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 4/91 (4%)
Query: 4 SPCISQPAASWHPRPSALRPTAGSGPDTRTPGT----VEDGSAPCPAFRSPAVSPCGEEP 59
SP +S S + A PT D+ PG + G+A P ++ V
Sbjct: 83 SPSLSLTPGSGSEKREAGGPTGPKREDSALPGASTSHLPAGTADPPPPQAGLVRDSRAGQ 142
Query: 60 CCFQISPAEETLELGRLVSPGNCDTLSPRAA 90
Q +P + +ELG V G+C +L P+ A
Sbjct: 143 TAVQTAPWQVGVELGVWVGLGSCGSLRPQLA 173
>gi|224465184 nuclear factor I/A isoform 4 [Homo sapiens]
Length = 554
Score = 30.4 bits (67), Expect = 0.74
Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
Query: 4 SPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSA---PCPAFRSPAVSP 54
+P + P P P RP PDT+ P T +G A P + +P+ SP
Sbjct: 474 NPFLPTPMLPPPPPPPMARPVPLPVPDTKPPTTSTEGGAASPTSPTYSTPSTSP 527
>gi|224465182 nuclear factor I/A isoform 3 [Homo sapiens]
Length = 501
Score = 30.4 bits (67), Expect = 0.74
Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
Query: 4 SPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSA---PCPAFRSPAVSP 54
+P + P P P RP PDT+ P T +G A P + +P+ SP
Sbjct: 421 NPFLPTPMLPPPPPPPMARPVPLPVPDTKPPTTSTEGGAASPTSPTYSTPSTSP 474
>gi|197927284 nuclear factor I/A isoform 1 [Homo sapiens]
Length = 509
Score = 30.4 bits (67), Expect = 0.74
Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
Query: 4 SPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSA---PCPAFRSPAVSP 54
+P + P P P RP PDT+ P T +G A P + +P+ SP
Sbjct: 429 NPFLPTPMLPPPPPPPMARPVPLPVPDTKPPTTSTEGGAASPTSPTYSTPSTSP 482
>gi|19718780 semaphorin 6B precursor [Homo sapiens]
Length = 888
Score = 30.4 bits (67), Expect = 0.74
Identities = 40/141 (28%), Positives = 51/141 (36%), Gaps = 10/141 (7%)
Query: 19 SALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPCCFQISPAEETLELGRLVS 78
S L GP R G P A +P + + Q P + L+ G L +
Sbjct: 652 SRLGERRAQGPGGRGGGGGGGAGVPPEALLAPLMQNGWAKATLLQGGPHD--LDSGLLPT 709
Query: 79 PGNCDTLSPRAAGFYACHVRSLIPCRSTKGRWPLTASAAGL------SRLSQILCTPGAP 132
P R + H +L P G L ASA+ +R + PG P
Sbjct: 710 PEQTPLPQKRLPTPHP-HPHALGPRAWDHGHPLLPASASSSLLLLAPARAPEQPPAPGEP 768
Query: 133 LGPPGSLRGPYLGRASHGDFP 153
P G L GRASHGDFP
Sbjct: 769 T-PDGRLYAARPGRASHGDFP 788
>gi|239756560 PREDICTED: hypothetical protein [Homo sapiens]
Length = 178
Score = 30.0 bits (66), Expect = 0.96
Identities = 16/36 (44%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 10 PAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCP 45
P + P +LRP A SG PG V GS PCP
Sbjct: 135 PLPQYAVSPRSLRPEARSGVPRGPPG-VSPGSTPCP 169
>gi|239745525 PREDICTED: hypothetical protein [Homo sapiens]
Length = 178
Score = 30.0 bits (66), Expect = 0.96
Identities = 16/36 (44%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 10 PAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCP 45
P + P +LRP A SG PG V GS PCP
Sbjct: 135 PLPQYAVSPRSLRPEARSGVPRGPPG-VSPGSTPCP 169
>gi|237512940 early growth response 4 [Homo sapiens]
Length = 589
Score = 30.0 bits (66), Expect = 0.96
Identities = 15/51 (29%), Positives = 22/51 (43%)
Query: 7 ISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGE 57
+ +P ++ R +A R G R P + G P P R+P CGE
Sbjct: 25 LGEPGSALERRGAAARGRCGRARAPRLPDSFPRGECPKPGARAPRSVRCGE 75
>gi|122937321 UNC homeobox [Homo sapiens]
Length = 531
Score = 30.0 bits (66), Expect = 0.96
Identities = 36/136 (26%), Positives = 44/136 (32%), Gaps = 22/136 (16%)
Query: 16 PRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPCCFQISPAEETLELGR 75
P P P A GP G G+AP P PA C Q S A GR
Sbjct: 244 PEPPEPPPPAAKGPGAHASGAA--GTAPAPPGEPPAPGTCDPAFYPSQRSGAGPQPRPGR 301
Query: 76 LVSPGNCDTLS-----------------PRAAGFYACHVRSLIPCRSTKGRWPLTASAAG 118
P + D S P+A+ F + S P R A+AAG
Sbjct: 302 ---PADKDAASCGPGAAVAAVERGAAGLPKASPFSVESLLSDSPPRRKAASNAAAAAAAG 358
Query: 119 LSRLSQILCTPGAPLG 134
L + C P +G
Sbjct: 359 LDFAPGLPCAPRTLIG 374
>gi|56790299 pleckstrin and Sec7 domain containing [Homo sapiens]
Length = 1024
Score = 30.0 bits (66), Expect = 0.96
Identities = 21/50 (42%), Positives = 25/50 (50%), Gaps = 6/50 (12%)
Query: 8 SQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFR---SPAVSP 54
S PA+ + S LR AG GP R G V +APC R SP V+P
Sbjct: 34 SPPASMYGSTGSLLRRVAGPGPRGRELGRV---TAPCTPLRGPPSPRVAP 80
>gi|169178932 PREDICTED: hypothetical protein [Homo sapiens]
Length = 62
Score = 29.6 bits (65), Expect = 1.3
Identities = 21/58 (36%), Positives = 23/58 (39%), Gaps = 10/58 (17%)
Query: 1 MRASPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEE 58
MR SP S P PR G GP+ R PG G P PA S + C E
Sbjct: 1 MRRSPASSPPGGE--PR--------GLGPERRQPGCSPPGELPSPAGDSGEPADCEAE 48
>gi|169172282 PREDICTED: similar to hCG1818014 [Homo sapiens]
Length = 127
Score = 29.6 bits (65), Expect = 1.3
Identities = 13/30 (43%), Positives = 16/30 (53%)
Query: 16 PRPSALRPTAGSGPDTRTPGTVEDGSAPCP 45
PRPS L + GS PD + P +AP P
Sbjct: 92 PRPSDLNSSTGSSPDLQLPDPQTPTAAPAP 121
>gi|169176343 PREDICTED: hypothetical protein [Homo sapiens]
Length = 62
Score = 29.6 bits (65), Expect = 1.3
Identities = 21/58 (36%), Positives = 23/58 (39%), Gaps = 10/58 (17%)
Query: 1 MRASPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEE 58
MR SP S P PR G GP+ R PG G P PA S + C E
Sbjct: 1 MRRSPASSPPGGE--PR--------GLGPERRQPGCSPPGELPSPAGDSGEPADCEAE 48
>gi|157738639 tensin 4 [Homo sapiens]
Length = 715
Score = 29.6 bits (65), Expect = 1.3
Identities = 17/34 (50%), Positives = 20/34 (58%), Gaps = 7/34 (20%)
Query: 23 PTAGSGPDTRTPG---TVEDGSA----PCPAFRS 49
P GS P RTPG +V+ G+A PCPA RS
Sbjct: 381 PEPGSSPPQRTPGHQNSVQPGAASPSNPCPATRS 414
>gi|154800457 centrosomal protein 68kDa [Homo sapiens]
Length = 757
Score = 29.6 bits (65), Expect = 1.3
Identities = 27/83 (32%), Positives = 34/83 (40%), Gaps = 5/83 (6%)
Query: 50 PAVSPCGEEPCCFQISPAEETLELGRLVSPGNCDTLSPRAAGFYACHVRSLIPCRSTKGR 109
P + G + F +SPA TL+ VSP NC A F SL + R
Sbjct: 327 PVLQDSGVDLDSFSVSPAS-TLKSPTNVSP-NCPPAEATALPFSGPREPSL---KQWPSR 381
Query: 110 WPLTASAAGLSRLSQILCTPGAP 132
P GL+ SQ+ TP AP
Sbjct: 382 VPQKQGGMGLASWSQLASTPRAP 404
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.135 0.442
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,989,913
Number of Sequences: 37866
Number of extensions: 515325
Number of successful extensions: 2455
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 103
Number of HSP's that attempted gapping in prelim test: 2344
Number of HSP's gapped (non-prelim): 216
length of query: 167
length of database: 18,247,518
effective HSP length: 95
effective length of query: 72
effective length of database: 14,650,248
effective search space: 1054817856
effective search space used: 1054817856
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.