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Search of human proteins with 169209818
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169209818 PREDICTED: hypothetical protein [Homo sapiens]
(135 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169209818 PREDICTED: hypothetical protein [Homo sapiens] 284 2e-77
gi|169210342 PREDICTED: hypothetical protein [Homo sapiens] 276 5e-75
gi|169184221 PREDICTED: family with sequence similarity 27, memb... 44 5e-05
gi|169177259 PREDICTED: similar to Protein FAM27E2 [Homo sapiens] 44 5e-05
gi|239755774 PREDICTED: similar to Protein FAM27E2 [Homo sapiens] 42 2e-04
gi|239750275 PREDICTED: similar to Protein FAM27E2 [Homo sapiens] 42 2e-04
gi|239744585 PREDICTED: similar to Protein FAM27E2 [Homo sapiens] 42 2e-04
gi|239752497 PREDICTED: similar to family with sequence similari... 41 3e-04
gi|239749581 PREDICTED: hypothetical protein XP_002347092 [Homo ... 40 4e-04
gi|169184225 PREDICTED: similar to Protein FAM27D1 [Homo sapiens] 40 4e-04
gi|239743790 PREDICTED: hypothetical protein XP_002342959 [Homo ... 40 4e-04
gi|239743788 PREDICTED: hypothetical protein XP_002342958 [Homo ... 40 4e-04
gi|169177315 PREDICTED: similar to Protein FAM27D1 [Homo sapiens] 40 4e-04
gi|239757459 PREDICTED: similar to Protein FAM27D1 [Homo sapiens] 40 7e-04
gi|239750316 PREDICTED: hypothetical protein XP_002347358 [Homo ... 40 7e-04
gi|239746462 PREDICTED: hypothetical protein XP_002344254 [Homo ... 40 7e-04
gi|239754574 PREDICTED: similar to Protein FAM27D1 [Homo sapiens] 37 0.005
gi|239749126 PREDICTED: hypothetical protein XP_002346920 [Homo ... 37 0.005
gi|239743178 PREDICTED: hypothetical protein XP_002342769 [Homo ... 37 0.005
gi|239508842 PREDICTED: similar to Protein FAM27D1 [Homo sapiens] 37 0.005
gi|239747174 PREDICTED: hypothetical protein XP_002343931, parti... 37 0.006
gi|239757964 PREDICTED: hypothetical protein [Homo sapiens] 36 0.008
gi|10190682 chromobox homolog 8 [Homo sapiens] 35 0.014
gi|34878777 ring finger protein 20 [Homo sapiens] 35 0.024
gi|116008442 zinc finger CCCH-type containing 13 [Homo sapiens] 35 0.024
gi|55741709 RNA binding motif protein 25 [Homo sapiens] 34 0.031
gi|239747891 PREDICTED: hypothetical protein [Homo sapiens] 34 0.031
gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo ... 34 0.031
gi|31377595 zinc finger CCCH-type containing 18 [Homo sapiens] 34 0.031
gi|197333879 genetic suppressor element 1 isoform 2 [Homo sapiens] 33 0.054
>gi|169209818 PREDICTED: hypothetical protein [Homo sapiens]
Length = 135
Score = 284 bits (726), Expect = 2e-77
Identities = 135/135 (100%), Positives = 135/135 (100%)
Query: 1 MLSVSILHQFACLGFWTFTKPLSQSVLVRVLQRNRTNIYIYVLRNLGWGYIPINVSQCQK 60
MLSVSILHQFACLGFWTFTKPLSQSVLVRVLQRNRTNIYIYVLRNLGWGYIPINVSQCQK
Sbjct: 1 MLSVSILHQFACLGFWTFTKPLSQSVLVRVLQRNRTNIYIYVLRNLGWGYIPINVSQCQK 60
Query: 61 NCKLNHYKSRILCTHTHTHTHTENERESERETERERERERDWLKELCSLRIPKIYSLEAE 120
NCKLNHYKSRILCTHTHTHTHTENERESERETERERERERDWLKELCSLRIPKIYSLEAE
Sbjct: 61 NCKLNHYKSRILCTHTHTHTHTENERESERETERERERERDWLKELCSLRIPKIYSLEAE 120
Query: 121 DPGKPMCISSLSLKT 135
DPGKPMCISSLSLKT
Sbjct: 121 DPGKPMCISSLSLKT 135
>gi|169210342 PREDICTED: hypothetical protein [Homo sapiens]
Length = 136
Score = 276 bits (705), Expect = 5e-75
Identities = 133/136 (97%), Positives = 134/136 (98%), Gaps = 1/136 (0%)
Query: 1 MLSVSILHQFACLGFWTFTKPLSQSVLVRVLQRNRTNIYIYVLRNLGWGYIPINVSQCQK 60
MLSVSILHQFACLGFWTFTKPLSQSVLVRVLQRNRTNIYIYVLRNLGWGYIPINVSQCQK
Sbjct: 1 MLSVSILHQFACLGFWTFTKPLSQSVLVRVLQRNRTNIYIYVLRNLGWGYIPINVSQCQK 60
Query: 61 NCKLNHYKSRILCTHTHTHTHTENERES-ERETERERERERDWLKELCSLRIPKIYSLEA 119
NCKLNHYKSRILCTHTHTHTHTENERES ER+ ERERERERDWLKELCSLRIPKIYSLEA
Sbjct: 61 NCKLNHYKSRILCTHTHTHTHTENERESGERQRERERERERDWLKELCSLRIPKIYSLEA 120
Query: 120 EDPGKPMCISSLSLKT 135
EDPGKPMCISSLSLKT
Sbjct: 121 EDPGKPMCISSLSLKT 136
>gi|169184221 PREDICTED: family with sequence similarity 27, member
E3 [Homo sapiens]
Length = 113
Score = 43.5 bits (101), Expect = 5e-05
Identities = 18/27 (66%), Positives = 22/27 (81%)
Query: 74 THTHTHTHTENERESERETERERERER 100
THTHT THT+ +RE ER T+R R+RER
Sbjct: 68 THTHTGTHTQTDRERERNTQRLRDRER 94
>gi|169177259 PREDICTED: similar to Protein FAM27E2 [Homo sapiens]
Length = 113
Score = 43.5 bits (101), Expect = 5e-05
Identities = 18/27 (66%), Positives = 22/27 (81%)
Query: 74 THTHTHTHTENERESERETERERERER 100
THTHT THT+ +RE ER T+R R+RER
Sbjct: 68 THTHTGTHTQTDRERERNTQRLRDRER 94
>gi|239755774 PREDICTED: similar to Protein FAM27E2 [Homo sapiens]
Length = 126
Score = 41.6 bits (96), Expect = 2e-04
Identities = 19/39 (48%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Query: 62 CKLNHYKSRILCTHTHTHTHTENERESERETERERERER 100
C H + + TH HT THT+ +RE ER T+R R+RER
Sbjct: 60 CCTGHIRPK---THLHTGTHTQTDRERERNTQRLRDRER 95
>gi|239750275 PREDICTED: similar to Protein FAM27E2 [Homo sapiens]
Length = 126
Score = 41.6 bits (96), Expect = 2e-04
Identities = 19/39 (48%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Query: 62 CKLNHYKSRILCTHTHTHTHTENERESERETERERERER 100
C H + + TH HT THT+ +RE ER T+R R+RER
Sbjct: 60 CCTGHIRPK---THLHTGTHTQTDRERERNTQRLRDRER 95
>gi|239744585 PREDICTED: similar to Protein FAM27E2 [Homo sapiens]
Length = 126
Score = 41.6 bits (96), Expect = 2e-04
Identities = 19/39 (48%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Query: 62 CKLNHYKSRILCTHTHTHTHTENERESERETERERERER 100
C H + + TH HT THT+ +RE ER T+R R+RER
Sbjct: 60 CCTGHIRPK---THLHTGTHTQTDRERERNTQRLRDRER 95
>gi|239752497 PREDICTED: similar to family with sequence similarity
27, member D1, partial [Homo sapiens]
Length = 122
Score = 40.8 bits (94), Expect = 3e-04
Identities = 18/30 (60%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Query: 74 THTHTHTHTENERESERETERERERE-RDW 102
THTHT HT+ RE ER T+R R+RE R+W
Sbjct: 69 THTHTGIHTQTHRERERNTQRLRDRERREW 98
Score = 28.5 bits (62), Expect = 1.7
Identities = 10/14 (71%), Positives = 11/14 (78%)
Query: 75 HTHTHTHTENERES 88
HTHTHTHTE +S
Sbjct: 101 HTHTHTHTETHTQS 114
>gi|239749581 PREDICTED: hypothetical protein XP_002347092 [Homo
sapiens]
Length = 122
Score = 40.4 bits (93), Expect = 4e-04
Identities = 17/27 (62%), Positives = 20/27 (74%)
Query: 74 THTHTHTHTENERESERETERERERER 100
THTHT HT+ RE ER T+R R+RER
Sbjct: 69 THTHTGMHTQTHRERERNTQRLRDRER 95
>gi|169184225 PREDICTED: similar to Protein FAM27D1 [Homo sapiens]
Length = 126
Score = 40.4 bits (93), Expect = 4e-04
Identities = 17/27 (62%), Positives = 20/27 (74%)
Query: 74 THTHTHTHTENERESERETERERERER 100
THTHT HT+ RE ER T+R R+RER
Sbjct: 69 THTHTGIHTQTHRERERNTQRLRDRER 95
>gi|239743790 PREDICTED: hypothetical protein XP_002342959 [Homo
sapiens]
Length = 124
Score = 40.4 bits (93), Expect = 4e-04
Identities = 17/27 (62%), Positives = 20/27 (74%)
Query: 74 THTHTHTHTENERESERETERERERER 100
THTHT HT+ RE ER T+R R+RER
Sbjct: 69 THTHTGMHTQTHRERERNTQRLRDRER 95
>gi|239743788 PREDICTED: hypothetical protein XP_002342958 [Homo
sapiens]
Length = 125
Score = 40.4 bits (93), Expect = 4e-04
Identities = 17/27 (62%), Positives = 20/27 (74%)
Query: 74 THTHTHTHTENERESERETERERERER 100
THTHT HT+ RE ER T+R R+RER
Sbjct: 69 THTHTGMHTQTHRERERNTQRLRDRER 95
>gi|169177315 PREDICTED: similar to Protein FAM27D1 [Homo sapiens]
Length = 126
Score = 40.4 bits (93), Expect = 4e-04
Identities = 17/27 (62%), Positives = 20/27 (74%)
Query: 74 THTHTHTHTENERESERETERERERER 100
THTHT HT+ RE ER T+R R+RER
Sbjct: 69 THTHTGIHTQTHRERERNTQRLRDRER 95
Score = 27.7 bits (60), Expect = 2.9
Identities = 9/14 (64%), Positives = 11/14 (78%)
Query: 75 HTHTHTHTENERES 88
HTHTHTHT +R +
Sbjct: 101 HTHTHTHTHTQRHT 114
Score = 27.3 bits (59), Expect = 3.8
Identities = 9/10 (90%), Positives = 10/10 (100%)
Query: 74 THTHTHTHTE 83
THTHTHTHT+
Sbjct: 102 THTHTHTHTQ 111
>gi|239757459 PREDICTED: similar to Protein FAM27D1 [Homo sapiens]
Length = 122
Score = 39.7 bits (91), Expect = 7e-04
Identities = 17/27 (62%), Positives = 20/27 (74%)
Query: 74 THTHTHTHTENERESERETERERERER 100
TH HT THT+ RE ER T+R R+RER
Sbjct: 69 THKHTGTHTQTHREWERNTQRLRDRER 95
>gi|239750316 PREDICTED: hypothetical protein XP_002347358 [Homo
sapiens]
Length = 122
Score = 39.7 bits (91), Expect = 7e-04
Identities = 17/27 (62%), Positives = 20/27 (74%)
Query: 74 THTHTHTHTENERESERETERERERER 100
TH HT THT+ RE ER T+R R+RER
Sbjct: 69 THKHTGTHTQTHREWERNTQRLRDRER 95
>gi|239746462 PREDICTED: hypothetical protein XP_002344254 [Homo
sapiens]
Length = 122
Score = 39.7 bits (91), Expect = 7e-04
Identities = 17/27 (62%), Positives = 20/27 (74%)
Query: 74 THTHTHTHTENERESERETERERERER 100
TH HT THT+ RE ER T+R R+RER
Sbjct: 69 THKHTGTHTQTHREWERNTQRLRDRER 95
>gi|239754574 PREDICTED: similar to Protein FAM27D1 [Homo sapiens]
Length = 131
Score = 37.0 bits (84), Expect = 0.005
Identities = 15/27 (55%), Positives = 19/27 (70%)
Query: 74 THTHTHTHTENERESERETERERERER 100
THTH TH + R+ ER T+R R+RER
Sbjct: 69 THTHKGTHAQTHRKRERNTQRLRDRER 95
Score = 26.6 bits (57), Expect = 6.6
Identities = 10/15 (66%), Positives = 10/15 (66%)
Query: 74 THTHTHTHTENERES 88
THTHTHTH E S
Sbjct: 108 THTHTHTHKHTESYS 122
Score = 26.2 bits (56), Expect = 8.6
Identities = 9/16 (56%), Positives = 11/16 (68%)
Query: 74 THTHTHTHTENERESE 89
THT THTHT + +E
Sbjct: 104 THTDTHTHTHTHKHTE 119
Score = 26.2 bits (56), Expect = 8.6
Identities = 10/15 (66%), Positives = 10/15 (66%)
Query: 74 THTHTHTHTENERES 88
T THTHTHT ES
Sbjct: 106 TDTHTHTHTHKHTES 120
>gi|239749126 PREDICTED: hypothetical protein XP_002346920 [Homo
sapiens]
Length = 131
Score = 37.0 bits (84), Expect = 0.005
Identities = 15/27 (55%), Positives = 19/27 (70%)
Query: 74 THTHTHTHTENERESERETERERERER 100
THTH TH + R+ ER T+R R+RER
Sbjct: 69 THTHKGTHAQTHRKRERNTQRLRDRER 95
Score = 26.6 bits (57), Expect = 6.6
Identities = 10/15 (66%), Positives = 10/15 (66%)
Query: 74 THTHTHTHTENERES 88
THTHTHTH E S
Sbjct: 108 THTHTHTHKHTESYS 122
Score = 26.2 bits (56), Expect = 8.6
Identities = 9/16 (56%), Positives = 11/16 (68%)
Query: 74 THTHTHTHTENERESE 89
THT THTHT + +E
Sbjct: 104 THTDTHTHTHTHKHTE 119
Score = 26.2 bits (56), Expect = 8.6
Identities = 10/15 (66%), Positives = 10/15 (66%)
Query: 74 THTHTHTHTENERES 88
T THTHTHT ES
Sbjct: 106 TDTHTHTHTHKHTES 120
>gi|239743178 PREDICTED: hypothetical protein XP_002342769 [Homo
sapiens]
Length = 174
Score = 37.0 bits (84), Expect = 0.005
Identities = 15/27 (55%), Positives = 19/27 (70%)
Query: 74 THTHTHTHTENERESERETERERERER 100
THTH TH + R+ ER T+R R+RER
Sbjct: 69 THTHKGTHAQTHRKRERNTQRLRDRER 95
Score = 31.6 bits (70), Expect = 0.20
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 75 HTHTHTHTENERESERETERERERERDWLKELCSLRIPKIYSL 117
HTHTHT T + + TE+E + RD + SLR P +++L
Sbjct: 101 HTHTHTDTHTHTHTHKHTEKEVAQYRDEIS--VSLR-PTLFTL 140
Score = 30.8 bits (68), Expect = 0.35
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 74 THTHTHTHTENERESERETERERE 97
THT THTHT + +E+E + R+
Sbjct: 104 THTDTHTHTHTHKHTEKEVAQYRD 127
>gi|239508842 PREDICTED: similar to Protein FAM27D1 [Homo sapiens]
Length = 174
Score = 37.0 bits (84), Expect = 0.005
Identities = 15/27 (55%), Positives = 19/27 (70%)
Query: 74 THTHTHTHTENERESERETERERERER 100
THTH TH + R+ ER T+R R+RER
Sbjct: 69 THTHKGTHAQTHRKRERNTQRLRDRER 95
Score = 31.6 bits (70), Expect = 0.20
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 75 HTHTHTHTENERESERETERERERERDWLKELCSLRIPKIYSL 117
HTHTHT T + + TE+E + RD + SLR P +++L
Sbjct: 101 HTHTHTDTHTHTHTHKHTEKEVAQYRDEIS--VSLR-PTLFTL 140
Score = 30.8 bits (68), Expect = 0.35
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 74 THTHTHTHTENERESERETERERE 97
THT THTHT + +E+E + R+
Sbjct: 104 THTDTHTHTHTHKHTEKEVAQYRD 127
>gi|239747174 PREDICTED: hypothetical protein XP_002343931, partial
[Homo sapiens]
Length = 213
Score = 36.6 bits (83), Expect = 0.006
Identities = 16/33 (48%), Positives = 22/33 (66%)
Query: 74 THTHTHTHTENERESERETERERERERDWLKEL 106
T HT T E +++ ERE ER R+RER+ KE+
Sbjct: 98 TDRHTETDRERQKQKEREMERVRDREREKQKEM 130
Score = 35.0 bits (79), Expect = 0.018
Identities = 15/28 (53%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
Query: 75 HTHTHTHT-ENERESERETERERERERD 101
HTHT T T + +RE RET+RER+R ++
Sbjct: 9 HTHTETETMDRQRERRRETDRERDRAKE 36
Score = 33.1 bits (74), Expect = 0.070
Identities = 13/25 (52%), Positives = 21/25 (84%)
Query: 81 HTENERESERETERERERERDWLKE 105
HT+ ERE +RET+R+R+R+R+ +E
Sbjct: 187 HTDMERERQRETDRKRDRQRESERE 211
Score = 32.7 bits (73), Expect = 0.092
Identities = 16/28 (57%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Query: 79 HTHTENER-ESERETERERERERDWLKE 105
HTHTE E + +RE RE +RERD KE
Sbjct: 9 HTHTETETMDRQRERRRETDRERDRAKE 36
Score = 30.8 bits (68), Expect = 0.35
Identities = 12/19 (63%), Positives = 17/19 (89%)
Query: 83 ENERESERETERERERERD 101
E E++++RE ER+RERERD
Sbjct: 63 EREKQTDREGERQRERERD 81
Score = 30.0 bits (66), Expect = 0.59
Identities = 11/19 (57%), Positives = 17/19 (89%)
Query: 83 ENERESERETERERERERD 101
E +R+ +RETERER++ER+
Sbjct: 79 ERDRDRQRETERERDKERE 97
Score = 29.6 bits (65), Expect = 0.78
Identities = 11/25 (44%), Positives = 19/25 (76%)
Query: 81 HTENERESERETERERERERDWLKE 105
H+E +R+ +RE RER+R+R+ K+
Sbjct: 43 HSERDRQRDRERNRERDRDREREKQ 67
Score = 29.6 bits (65), Expect = 0.78
Identities = 16/47 (34%), Positives = 25/47 (53%)
Query: 59 QKNCKLNHYKSRILCTHTHTHTHTENERESERETERERERERDWLKE 105
Q++ + N + R T E +RE ER+ +R+RE ER+ KE
Sbjct: 49 QRDRERNRERDRDREREKQTDREGERQRERERDRDRQRETERERDKE 95
Score = 29.6 bits (65), Expect = 0.78
Identities = 11/25 (44%), Positives = 18/25 (72%)
Query: 77 HTHTHTENERESERETERERERERD 101
HT E +RE++R+ +R+RE ER+
Sbjct: 187 HTDMERERQRETDRKRDRQRESERE 211
Score = 28.9 bits (63), Expect = 1.3
Identities = 10/23 (43%), Positives = 17/23 (73%)
Query: 79 HTHTENERESERETERERERERD 101
H+ + +R+ ER ER+R+RER+
Sbjct: 43 HSERDRQRDRERNRERDRDRERE 65
Score = 28.9 bits (63), Expect = 1.3
Identities = 12/24 (50%), Positives = 17/24 (70%)
Query: 82 TENERESERETERERERERDWLKE 105
TE ER+ ERET+R E +R+ K+
Sbjct: 88 TERERDKERETDRHTETDRERQKQ 111
Score = 28.5 bits (62), Expect = 1.7
Identities = 12/23 (52%), Positives = 17/23 (73%)
Query: 83 ENERESERETERERERERDWLKE 105
+ ERE +R+ +RE ERERD +E
Sbjct: 75 QRERERDRDRQRETERERDKERE 97
Score = 28.5 bits (62), Expect = 1.7
Identities = 12/33 (36%), Positives = 21/33 (63%)
Query: 78 THTHTENERESERETERERERERDWLKELCSLR 110
T + ERE++R TE +RER++ +E+ +R
Sbjct: 88 TERERDKERETDRHTETDRERQKQKEREMERVR 120
Score = 28.5 bits (62), Expect = 1.7
Identities = 15/49 (30%), Positives = 25/49 (51%)
Query: 57 QCQKNCKLNHYKSRILCTHTHTHTHTENERESERETERERERERDWLKE 105
Q QK ++ + R + +RE++RE ER+ ERER+ +E
Sbjct: 109 QKQKEREMERVRDREREKQKEMGRERQTDRETDRERERQAERERETGRE 157
Score = 27.7 bits (60), Expect = 2.9
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 77 HTHTHTENERESERETERERERERDWLKE 105
H+ + +RE RE +R+RERE+ +E
Sbjct: 43 HSERDRQRDRERNRERDRDREREKQTDRE 71
Score = 27.3 bits (59), Expect = 3.8
Identities = 11/19 (57%), Positives = 15/19 (78%)
Query: 83 ENERESERETERERERERD 101
+ RE ERE +RERER+R+
Sbjct: 162 DRHRERERERKRERERKRE 180
Score = 27.3 bits (59), Expect = 3.8
Identities = 13/22 (59%), Positives = 17/22 (77%), Gaps = 1/22 (4%)
Query: 81 HTENERESERETERERE-RERD 101
H E ERE +RE ER+RE +ER+
Sbjct: 164 HRERERERKRERERKRETKERE 185
Score = 26.9 bits (58), Expect = 5.0
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 75 HTHTHTHTENERESERETERERERERD 101
H+ + ER ER+ +RERE++ D
Sbjct: 43 HSERDRQRDRERNRERDRDREREKQTD 69
Score = 26.6 bits (57), Expect = 6.6
Identities = 13/33 (39%), Positives = 17/33 (51%)
Query: 68 KSRILCTHTHTHTHTENERESERETERERERER 100
K + + T T+ ERE + E ERE RER
Sbjct: 126 KQKEMGRERQTDRETDRERERQAERERETGRER 158
Score = 26.6 bits (57), Expect = 6.6
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 76 THTHTHTENERESERETERERERERD 101
T T E ER++ERE E RER+ +
Sbjct: 136 TDRETDRERERQAERERETGRERKTE 161
Score = 26.2 bits (56), Expect = 8.6
Identities = 13/23 (56%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
Query: 79 HTHTENERESERETERE-RERER 100
H E ER+ ERE +RE +ERER
Sbjct: 164 HRERERERKRERERKRETKERER 186
>gi|239757964 PREDICTED: hypothetical protein [Homo sapiens]
Length = 290
Score = 36.2 bits (82), Expect = 0.008
Identities = 16/32 (50%), Positives = 21/32 (65%)
Query: 74 THTHTHTHTENERESERETERERERERDWLKE 105
T T E E++ ERETER+R+R+RD KE
Sbjct: 167 TETERERDREREKQKERETERDRDRQRDTEKE 198
Score = 35.4 bits (80), Expect = 0.014
Identities = 15/26 (57%), Positives = 18/26 (69%)
Query: 76 THTHTHTENERESERETERERERERD 101
T T E +RE ERET+R RER+RD
Sbjct: 213 TQTERQRETDREGERETDRRRERQRD 238
Score = 31.6 bits (70), Expect = 0.20
Identities = 13/24 (54%), Positives = 19/24 (79%)
Query: 82 TENERESERETERERERERDWLKE 105
TE +R+ +RETE ERER+R+ K+
Sbjct: 157 TEKDRDGQRETETERERDREREKQ 180
Score = 30.0 bits (66), Expect = 0.59
Identities = 11/20 (55%), Positives = 17/20 (85%)
Query: 82 TENERESERETERERERERD 101
TE +R+ +R+TE+ERER+ D
Sbjct: 185 TERDRDRQRDTEKERERQTD 204
Score = 29.6 bits (65), Expect = 0.78
Identities = 13/20 (65%), Positives = 16/20 (80%)
Query: 82 TENERESERETERERERERD 101
TE ER+ ERE ++ RERERD
Sbjct: 119 TEIERDREREKQKGRERERD 138
Score = 29.3 bits (64), Expect = 1.0
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 59 QKNCKLNHYKSRILCTHTHTHTHTENERESERETERERERERD 101
QK + + R T T+ ER+ +R+T+ ER+RE D
Sbjct: 180 QKERETERDRDRQRDTEKERERQTDRERDRQRKTQTERQRETD 222
Score = 29.3 bits (64), Expect = 1.0
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 74 THTHTHTHTENERESERETERERERER 100
T T E ERE++R ER+R+R+R
Sbjct: 215 TERQRETDREGERETDRRRERQRDRDR 241
Score = 28.5 bits (62), Expect = 1.7
Identities = 15/43 (34%), Positives = 21/43 (48%)
Query: 59 QKNCKLNHYKSRILCTHTHTHTHTENERESERETERERERERD 101
+K + N + R T E ++ ERE +R RERERD
Sbjct: 104 RKEKETNRNRDREKQTEIERDREREKQKGRERERDRGRERERD 146
Score = 28.1 bits (61), Expect = 2.3
Identities = 11/19 (57%), Positives = 15/19 (78%)
Query: 83 ENERESERETERERERERD 101
E ER+ +RE ERER+ E+D
Sbjct: 142 ERERDRDREKERERQTEKD 160
Score = 27.7 bits (60), Expect = 2.9
Identities = 13/20 (65%), Positives = 15/20 (75%)
Query: 86 RESERETERERERERDWLKE 105
RE ER+ RERER+RD KE
Sbjct: 133 RERERDRGRERERDRDREKE 152
Score = 27.7 bits (60), Expect = 2.9
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 8/31 (25%)
Query: 83 ENERESER--------ETERERERERDWLKE 105
E ER++E+ ETERER+RER+ KE
Sbjct: 152 ERERQTEKDRDGQRETETERERDREREKQKE 182
Score = 27.7 bits (60), Expect = 2.9
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 78 THTHTENERESERETERERERERDWLKE 105
T + +RE+E E ER+RERE+ +E
Sbjct: 157 TEKDRDGQRETETERERDREREKQKERE 184
Score = 26.9 bits (58), Expect = 5.0
Identities = 10/23 (43%), Positives = 17/23 (73%)
Query: 83 ENERESERETERERERERDWLKE 105
E +R+ E+E ER+ E++RD +E
Sbjct: 144 ERDRDREKERERQTEKDRDGQRE 166
Score = 26.2 bits (56), Expect = 8.6
Identities = 10/19 (52%), Positives = 15/19 (78%)
Query: 83 ENERESERETERERERERD 101
E ER+ RE ER+R+RE++
Sbjct: 134 ERERDRGRERERDRDREKE 152
Score = 26.2 bits (56), Expect = 8.6
Identities = 10/19 (52%), Positives = 15/19 (78%)
Query: 83 ENERESERETERERERERD 101
E +R ERE +R+RE+ER+
Sbjct: 136 ERDRGRERERDRDREKERE 154
Score = 26.2 bits (56), Expect = 8.6
Identities = 11/20 (55%), Positives = 15/20 (75%)
Query: 86 RESERETERERERERDWLKE 105
RE ER+ +RE+ERER K+
Sbjct: 141 RERERDRDREKERERQTEKD 160
Score = 26.2 bits (56), Expect = 8.6
Identities = 14/38 (36%), Positives = 19/38 (50%)
Query: 68 KSRILCTHTHTHTHTENERESERETERERERERDWLKE 105
K R T + + E +RET+RE ERE D +E
Sbjct: 197 KERERQTDRERDRQRKTQTERQRETDREGERETDRRRE 234
Score = 26.2 bits (56), Expect = 8.6
Identities = 10/23 (43%), Positives = 18/23 (78%)
Query: 83 ENERESERETERERERERDWLKE 105
E +RE +R+ ER++ER+++ KE
Sbjct: 244 ERDRERDRKEERKKERKKERKKE 266
>gi|10190682 chromobox homolog 8 [Homo sapiens]
Length = 389
Score = 35.4 bits (80), Expect = 0.014
Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 43 LRNLGWGYIPINVSQCQKNCKLNHYKSRILCTHTHTHTHTENERESERETERERERER 100
LRN+G P + + C+ + R E ERE ERE ERERERER
Sbjct: 124 LRNMGLSP-PASSTSTSSTCRAEAPRDRDRDRDRDRERDRERERERERERERERERER 180
Score = 32.3 bits (72), Expect = 0.12
Identities = 15/29 (51%), Positives = 21/29 (72%)
Query: 83 ENERESERETERERERERDWLKELCSLRI 111
+ ER+ ERE ERERERER+ +E + R+
Sbjct: 157 DRERDRERERERERERERERERERGTSRV 185
Score = 30.4 bits (67), Expect = 0.45
Identities = 13/23 (56%), Positives = 18/23 (78%)
Query: 83 ENERESERETERERERERDWLKE 105
+ +RE +RE ERERERER+ +E
Sbjct: 155 DRDRERDRERERERERERERERE 177
Score = 29.3 bits (64), Expect = 1.0
Identities = 12/23 (52%), Positives = 18/23 (78%)
Query: 83 ENERESERETERERERERDWLKE 105
+ +R+ ER+ ERERERER+ +E
Sbjct: 153 DRDRDRERDRERERERERERERE 175
Score = 28.1 bits (61), Expect = 2.3
Identities = 11/23 (47%), Positives = 18/23 (78%)
Query: 83 ENERESERETERERERERDWLKE 105
+ +R+ +RE +RERERER+ +E
Sbjct: 151 DRDRDRDRERDRERERERERERE 173
Score = 26.9 bits (58), Expect = 5.0
Identities = 10/23 (43%), Positives = 18/23 (78%)
Query: 83 ENERESERETERERERERDWLKE 105
+ +R+ +R+ ER+RERER+ +E
Sbjct: 149 DRDRDRDRDRERDRERERERERE 171
Score = 26.2 bits (56), Expect = 8.6
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 74 THTHTHTHTENERESERETERERERERDWLKE 105
T T + E R+ +R+ +R+RER+R+ +E
Sbjct: 136 TSTSSTCRAEAPRDRDRDRDRDRERDRERERE 167
>gi|34878777 ring finger protein 20 [Homo sapiens]
Length = 975
Score = 34.7 bits (78), Expect = 0.024
Identities = 16/23 (69%), Positives = 18/23 (78%)
Query: 83 ENERESERETERERERERDWLKE 105
E ERE ERE E+ERERE+ LKE
Sbjct: 577 EREREREREKEKEREREKQKLKE 599
Score = 31.2 bits (69), Expect = 0.27
Identities = 13/19 (68%), Positives = 16/19 (84%)
Query: 83 ENERESERETERERERERD 101
E ERE ERE E+E+ERER+
Sbjct: 575 EKEREREREREKEKERERE 593
Score = 30.4 bits (67), Expect = 0.45
Identities = 17/24 (70%), Positives = 18/24 (75%), Gaps = 1/24 (4%)
Query: 83 ENERESER-ETERERERERDWLKE 105
E ERE ER E ERERERER+ KE
Sbjct: 566 EEERERERREKEREREREREKEKE 589
Score = 28.5 bits (62), Expect = 1.7
Identities = 13/25 (52%), Positives = 18/25 (72%)
Query: 86 RESERETERERERERDWLKELCSLR 110
RE ERE ERERE+E++ +E L+
Sbjct: 574 REKEREREREREKEKEREREKQKLK 598
Score = 28.5 bits (62), Expect = 1.7
Identities = 12/21 (57%), Positives = 17/21 (80%)
Query: 85 ERESERETERERERERDWLKE 105
E+E ERE ERE+E+ER+ K+
Sbjct: 575 EKEREREREREKEKEREREKQ 595
Score = 26.6 bits (57), Expect = 6.6
Identities = 11/23 (47%), Positives = 17/23 (73%)
Query: 83 ENERESERETERERERERDWLKE 105
E ERE E+E ERE+++ ++ KE
Sbjct: 581 EREREKEKEREREKQKLKESEKE 603
>gi|116008442 zinc finger CCCH-type containing 13 [Homo sapiens]
Length = 1564
Score = 34.7 bits (78), Expect = 0.024
Identities = 16/23 (69%), Positives = 18/23 (78%)
Query: 83 ENERESERETERERERERDWLKE 105
E ERE ERE ERERERER+ +E
Sbjct: 757 ERERERERERERERERERERARE 779
Score = 33.5 bits (75), Expect = 0.054
Identities = 15/19 (78%), Positives = 16/19 (84%)
Query: 83 ENERESERETERERERERD 101
E ERE ERE ERERERER+
Sbjct: 755 ERERERERERERERERERE 773
Score = 33.5 bits (75), Expect = 0.054
Identities = 13/20 (65%), Positives = 16/20 (80%)
Query: 83 ENERESERETERERERERDW 102
E ERE RE ++ERER+RDW
Sbjct: 771 ERERERARERDKERERQRDW 790
Score = 33.1 bits (74), Expect = 0.070
Identities = 15/23 (65%), Positives = 18/23 (78%)
Query: 83 ENERESERETERERERERDWLKE 105
+ ERE +RE ERERERERD +E
Sbjct: 680 DRERERDRERERERERERDRERE 702
Score = 33.1 bits (74), Expect = 0.070
Identities = 15/24 (62%), Positives = 19/24 (79%)
Query: 83 ENERESERETERERERERDWLKEL 106
E +RE ERE ERER+RER+ +EL
Sbjct: 684 ERDRERERERERERDREREKEREL 707
Score = 33.1 bits (74), Expect = 0.070
Identities = 16/23 (69%), Positives = 17/23 (73%)
Query: 83 ENERESERETERERERERDWLKE 105
E ERE ERE ERER RERD +E
Sbjct: 763 ERERERERERERERARERDKERE 785
Score = 32.7 bits (73), Expect = 0.092
Identities = 15/23 (65%), Positives = 18/23 (78%)
Query: 83 ENERESERETERERERERDWLKE 105
E ER+ ERE ERERER+R+ KE
Sbjct: 682 ERERDRERERERERERDREREKE 704
Score = 32.3 bits (72), Expect = 0.12
Identities = 16/23 (69%), Positives = 17/23 (73%)
Query: 83 ENERESERETERERERERDWLKE 105
E ERE ERE ERERER R+ KE
Sbjct: 761 ERERERERERERERERARERDKE 783
Score = 32.0 bits (71), Expect = 0.16
Identities = 14/23 (60%), Positives = 18/23 (78%)
Query: 83 ENERESERETERERERERDWLKE 105
E ERE ERE +RERE+ER+ +E
Sbjct: 688 ERERERERERDREREKERELERE 710
Score = 32.0 bits (71), Expect = 0.16
Identities = 15/21 (71%), Positives = 17/21 (80%)
Query: 85 ERESERETERERERERDWLKE 105
ERE ERE ERERERER+ +E
Sbjct: 755 ERERERERERERERERERERE 775
Score = 31.2 bits (69), Expect = 0.27
Identities = 13/19 (68%), Positives = 16/19 (84%)
Query: 83 ENERESERETERERERERD 101
E +RE ER+ ERERERER+
Sbjct: 678 ERDRERERDRERERERERE 696
Score = 31.2 bits (69), Expect = 0.27
Identities = 13/19 (68%), Positives = 16/19 (84%)
Query: 83 ENERESERETERERERERD 101
E ERE ER+ E+ERERER+
Sbjct: 736 ERERERERDREKERERERE 754
Score = 30.8 bits (68), Expect = 0.35
Identities = 14/23 (60%), Positives = 17/23 (73%)
Query: 83 ENERESERETERERERERDWLKE 105
+ ERE ERE ERER RER+ +E
Sbjct: 698 DREREKERELERERARERERERE 720
Score = 30.8 bits (68), Expect = 0.35
Identities = 13/23 (56%), Positives = 18/23 (78%)
Query: 83 ENERESERETERERERERDWLKE 105
E ERE E+E +RER+R+RD +E
Sbjct: 714 EREREREKERDRERDRDRDHDRE 736
Score = 30.4 bits (67), Expect = 0.45
Identities = 14/19 (73%), Positives = 15/19 (78%)
Query: 83 ENERESERETERERERERD 101
E ERE RE ERERE+ERD
Sbjct: 706 ELERERAREREREREKERD 724
Score = 30.4 bits (67), Expect = 0.45
Identities = 13/19 (68%), Positives = 15/19 (78%)
Query: 83 ENERESERETERERERERD 101
E RE ERE E+ER+RERD
Sbjct: 710 ERAREREREREKERDRERD 728
Score = 30.0 bits (66), Expect = 0.59
Identities = 13/23 (56%), Positives = 17/23 (73%)
Query: 83 ENERESERETERERERERDWLKE 105
E +R+ + + ERERERERD KE
Sbjct: 726 ERDRDRDHDRERERERERDREKE 748
Score = 30.0 bits (66), Expect = 0.59
Identities = 12/19 (63%), Positives = 16/19 (84%)
Query: 83 ENERESERETERERERERD 101
+ ERE ERE +RE+ERER+
Sbjct: 734 DRERERERERDREKERERE 752
Score = 29.6 bits (65), Expect = 0.78
Identities = 13/23 (56%), Positives = 17/23 (73%)
Query: 83 ENERESERETERERERERDWLKE 105
E ERE +RE E+ERE ER+ +E
Sbjct: 692 ERERERDREREKERELERERARE 714
Score = 29.6 bits (65), Expect = 0.78
Identities = 12/23 (52%), Positives = 19/23 (82%)
Query: 83 ENERESERETERERERERDWLKE 105
+++RE ERE ER+RE+ER+ +E
Sbjct: 732 DHDRERERERERDREKERERERE 754
Score = 29.3 bits (64), Expect = 1.0
Identities = 13/23 (56%), Positives = 17/23 (73%)
Query: 83 ENERESERETERERERERDWLKE 105
E RE +RE ER+RERER+ +E
Sbjct: 674 ERARERDRERERDRERERERERE 696
Score = 29.3 bits (64), Expect = 1.0
Identities = 12/23 (52%), Positives = 17/23 (73%)
Query: 83 ENERESERETERERERERDWLKE 105
E ERE ER+ ER+R+R+ D +E
Sbjct: 716 EREREKERDRERDRDRDHDRERE 738
Score = 29.3 bits (64), Expect = 1.0
Identities = 16/24 (66%), Positives = 18/24 (75%), Gaps = 1/24 (4%)
Query: 83 ENERESERET-ERERERERDWLKE 105
E ERE ERE ERERERER+ +E
Sbjct: 746 EKEREREREERERERERERERERE 769
Score = 28.9 bits (63), Expect = 1.3
Identities = 12/19 (63%), Positives = 15/19 (78%)
Query: 83 ENERESERETERERERERD 101
E ER ERE ERE+ER+R+
Sbjct: 708 ERERAREREREREKERDRE 726
Score = 28.1 bits (61), Expect = 2.3
Identities = 11/23 (47%), Positives = 18/23 (78%)
Query: 83 ENERESERETERERERERDWLKE 105
+ +R+ +RE ERERER+R+ +E
Sbjct: 728 DRDRDHDRERERERERDREKERE 750
Score = 27.7 bits (60), Expect = 2.9
Identities = 12/22 (54%), Positives = 16/22 (72%)
Query: 84 NERESERETERERERERDWLKE 105
++R ER ER+RERERD +E
Sbjct: 669 DDRRDERARERDRERERDRERE 690
Score = 27.7 bits (60), Expect = 2.9
Identities = 12/22 (54%), Positives = 17/22 (77%)
Query: 84 NERESERETERERERERDWLKE 105
+ER ER+ ERER+RER+ +E
Sbjct: 673 DERARERDRERERDRERERERE 694
Score = 27.3 bits (59), Expect = 3.8
Identities = 10/19 (52%), Positives = 16/19 (84%)
Query: 83 ENERESERETERERERERD 101
+ ER+ +R+ +RERERER+
Sbjct: 724 DRERDRDRDHDRERERERE 742
Score = 26.9 bits (58), Expect = 5.0
Identities = 12/21 (57%), Positives = 16/21 (76%)
Query: 86 RESERETERERERERDWLKEL 106
R+ +R ERERERERD ++L
Sbjct: 1335 RDRDRLRERERERERDKRRDL 1355
Score = 26.6 bits (57), Expect = 6.6
Identities = 12/23 (52%), Positives = 16/23 (69%)
Query: 83 ENERESERETERERERERDWLKE 105
E +RE E+E E ERER R+ +E
Sbjct: 696 ERDREREKERELERERARERERE 718
Score = 26.2 bits (56), Expect = 8.6
Identities = 10/23 (43%), Positives = 17/23 (73%)
Query: 83 ENERESERETERERERERDWLKE 105
+ + + ERE ERER+RE++ +E
Sbjct: 730 DRDHDRERERERERDREKERERE 752
>gi|55741709 RNA binding motif protein 25 [Homo sapiens]
Length = 843
Score = 34.3 bits (77), Expect = 0.031
Identities = 15/23 (65%), Positives = 18/23 (78%)
Query: 83 ENERESERETERERERERDWLKE 105
E E+E ERE ERER+R+RD KE
Sbjct: 334 EREKEKERERERERDRDRDRTKE 356
Score = 34.3 bits (77), Expect = 0.031
Identities = 21/50 (42%), Positives = 25/50 (50%)
Query: 56 SQCQKNCKLNHYKSRILCTHTHTHTHTENERESERETERERERERDWLKE 105
S K+ + KSR E ERE ERE ERERERER+ +E
Sbjct: 375 SDRNKDRSRSREKSRDRERERERERERERERERERERERERERERERERE 424
Score = 33.9 bits (76), Expect = 0.041
Identities = 15/19 (78%), Positives = 16/19 (84%)
Query: 83 ENERESERETERERERERD 101
E ERE E+E ERERERERD
Sbjct: 330 EREREREKEKERERERERD 348
Score = 33.9 bits (76), Expect = 0.041
Identities = 16/23 (69%), Positives = 18/23 (78%)
Query: 83 ENERESERETERERERERDWLKE 105
E ERE ERE ERERERER+ +E
Sbjct: 404 ERERERERERERERERERERERE 426
Score = 33.9 bits (76), Expect = 0.041
Identities = 16/23 (69%), Positives = 18/23 (78%)
Query: 83 ENERESERETERERERERDWLKE 105
E ERE ERE ERERERER+ K+
Sbjct: 406 EREREREREREREREREREREKD 428
Score = 33.1 bits (74), Expect = 0.070
Identities = 14/19 (73%), Positives = 16/19 (84%)
Query: 83 ENERESERETERERERERD 101
E ERE E+E ERERER+RD
Sbjct: 332 EREREKEKERERERERDRD 350
Score = 32.3 bits (72), Expect = 0.12
Identities = 14/19 (73%), Positives = 16/19 (84%)
Query: 83 ENERESERETERERERERD 101
E ERE ERE E+ERERER+
Sbjct: 328 EREREREREKEKERERERE 346
Score = 31.6 bits (70), Expect = 0.20
Identities = 14/23 (60%), Positives = 18/23 (78%)
Query: 83 ENERESERETERERERERDWLKE 105
E ERE ERE ERE+E+ER+ +E
Sbjct: 324 EREREREREREREKEKERERERE 346
Score = 30.0 bits (66), Expect = 0.59
Identities = 12/19 (63%), Positives = 16/19 (84%)
Query: 83 ENERESERETERERERERD 101
E ERE ERE ERE++++RD
Sbjct: 414 EREREREREREREKDKKRD 432
Score = 29.3 bits (64), Expect = 1.0
Identities = 12/18 (66%), Positives = 15/18 (83%)
Query: 83 ENERESERETERERERER 100
E ERE ERE ERERE+++
Sbjct: 412 EREREREREREREREKDK 429
Score = 28.9 bits (63), Expect = 1.3
Identities = 13/20 (65%), Positives = 16/20 (80%)
Query: 86 RESERETERERERERDWLKE 105
RE ERE ERERERE++ +E
Sbjct: 323 REREREREREREREKEKERE 342
Score = 28.9 bits (63), Expect = 1.3
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 86 RESERETERERERERDWLKELCSLR-IPKIYSLEAEDP 122
RE E+E ERE ER R+ KE L+ + Y + +DP
Sbjct: 473 REYEKEAEREEERRREMAKEAKRLKEFLEDYDDDRDDP 510
Score = 28.1 bits (61), Expect = 2.3
Identities = 11/19 (57%), Positives = 15/19 (78%)
Query: 83 ENERESERETERERERERD 101
E ERE ER+ +R+R +ERD
Sbjct: 340 ERERERERDRDRDRTKERD 358
Score = 28.1 bits (61), Expect = 2.3
Identities = 11/19 (57%), Positives = 15/19 (78%)
Query: 83 ENERESERETERERERERD 101
E ERE ERE +++R+RE D
Sbjct: 418 EREREREREKDKKRDREED 436
Score = 27.3 bits (59), Expect = 3.8
Identities = 10/19 (52%), Positives = 16/19 (84%)
Query: 83 ENERESERETERERERERD 101
E ERE ERE E++++R+R+
Sbjct: 416 EREREREREREKDKKRDRE 434
Score = 26.9 bits (58), Expect = 5.0
Identities = 10/19 (52%), Positives = 15/19 (78%)
Query: 83 ENERESERETERERERERD 101
E ERE +R+ +R +ER+RD
Sbjct: 342 ERERERDRDRDRTKERDRD 360
Score = 26.9 bits (58), Expect = 5.0
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 83 ENERESERETERERERERDWLKELCSLR 110
+ +R ER+ +R+RER+RD +E S R
Sbjct: 350 DRDRTKERDRDRDRERDRDRDRERSSDR 377
Score = 26.6 bits (57), Expect = 6.6
Identities = 14/18 (77%), Positives = 14/18 (77%), Gaps = 1/18 (5%)
Query: 83 ENERESERETERERERER 100
E ER ERE ERERERER
Sbjct: 306 EKERR-ERERERERERER 322
>gi|239747891 PREDICTED: hypothetical protein [Homo sapiens]
Length = 202
Score = 34.3 bits (77), Expect = 0.031
Identities = 13/27 (48%), Positives = 19/27 (70%)
Query: 75 HTHTHTHTENERESERETERERERERD 101
H H E +R+++RE ERER++ERD
Sbjct: 37 HRQRDRHRERDRQTDREKERERQKERD 63
Score = 32.3 bits (72), Expect = 0.12
Identities = 13/18 (72%), Positives = 17/18 (94%)
Query: 83 ENERESERETERERERER 100
+ ERE+ERETER+RER+R
Sbjct: 67 QRERETERETERQRERQR 84
Score = 32.0 bits (71), Expect = 0.16
Identities = 14/24 (58%), Positives = 18/24 (75%)
Query: 82 TENERESERETERERERERDWLKE 105
TE ER+ ERE +R+RERER +E
Sbjct: 126 TERERDRERERQRQRERERQRQRE 149
Score = 30.8 bits (68), Expect = 0.35
Identities = 14/41 (34%), Positives = 23/41 (56%)
Query: 65 NHYKSRILCTHTHTHTHTENERESERETERERERERDWLKE 105
N ++ R T E ERE ++E +R+R+RER+ +E
Sbjct: 35 NRHRQRDRHRERDRQTDREKERERQKERDRQRQRERETERE 75
Score = 30.0 bits (66), Expect = 0.59
Identities = 12/18 (66%), Positives = 16/18 (88%)
Query: 83 ENERESERETERERERER 100
E ERE+ER+ ER+R+RER
Sbjct: 71 ETERETERQRERQRQRER 88
Score = 29.6 bits (65), Expect = 0.78
Identities = 15/44 (34%), Positives = 22/44 (50%)
Query: 57 QCQKNCKLNHYKSRILCTHTHTHTHTENERESERETERERERER 100
+ +N + N R T E ER+ +RE ER+R+RER
Sbjct: 107 ETDRNRERNRKGGRERDKQTERERDRERERQRQRERERQRQRER 150
Score = 29.6 bits (65), Expect = 0.78
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 78 THTHTENERESERETERERERERDWLKE 105
T + ERE +R+ ERER+R+R+ +E
Sbjct: 126 TERERDRERERQRQRERERQRQRERKRE 153
Score = 28.9 bits (63), Expect = 1.3
Identities = 13/43 (30%), Positives = 22/43 (51%)
Query: 59 QKNCKLNHYKSRILCTHTHTHTHTENERESERETERERERERD 101
QK + R T + +RE +R+T+RER+++RD
Sbjct: 59 QKERDRQRQRERETERETERQRERQRQRERKRQTDRERDKDRD 101
Score = 28.9 bits (63), Expect = 1.3
Identities = 11/19 (57%), Positives = 16/19 (84%)
Query: 83 ENERESERETERERERERD 101
+ ERE +RE ER+R+RER+
Sbjct: 125 QTERERDRERERQRQRERE 143
Score = 28.1 bits (61), Expect = 2.3
Identities = 11/23 (47%), Positives = 18/23 (78%)
Query: 83 ENERESERETERERERERDWLKE 105
E ++++ERE +RERER+R +E
Sbjct: 121 ERDKQTERERDRERERQRQRERE 143
Score = 27.7 bits (60), Expect = 2.9
Identities = 12/24 (50%), Positives = 17/24 (70%)
Query: 82 TENERESERETERERERERDWLKE 105
TE E E +RE +R+RER+R +E
Sbjct: 72 TERETERQRERQRQRERKRQTDRE 95
Score = 27.7 bits (60), Expect = 2.9
Identities = 11/28 (39%), Positives = 19/28 (67%)
Query: 74 THTHTHTHTENERESERETERERERERD 101
T + + + RE +++TERER+RER+
Sbjct: 108 TDRNRERNRKGGRERDKQTERERDRERE 135
Score = 27.7 bits (60), Expect = 2.9
Identities = 11/23 (47%), Positives = 18/23 (78%)
Query: 83 ENERESERETERERERERDWLKE 105
E +R+ ERE +R+RER+R+ +E
Sbjct: 135 ERQRQRERERQRQRERKRETDRE 157
Score = 26.9 bits (58), Expect = 5.0
Identities = 14/25 (56%), Positives = 18/25 (72%), Gaps = 2/25 (8%)
Query: 83 ENERESERETER--ERERERDWLKE 105
E +RE +RET+R E ERERD +E
Sbjct: 2 ERQRERKRETDRGKETERERDRQRE 26
Score = 26.9 bits (58), Expect = 5.0
Identities = 11/24 (45%), Positives = 17/24 (70%)
Query: 82 TENERESERETERERERERDWLKE 105
T+ +E+ERE +R+RERE +E
Sbjct: 11 TDRGKETERERDRQRERENQTERE 34
Score = 26.2 bits (56), Expect = 8.6
Identities = 13/25 (52%), Positives = 18/25 (72%), Gaps = 2/25 (8%)
Query: 83 ENERESERETERE--RERERDWLKE 105
+ +R+ ERETERE R+RER +E
Sbjct: 63 DRQRQRERETERETERQRERQRQRE 87
Score = 26.2 bits (56), Expect = 8.6
Identities = 10/18 (55%), Positives = 14/18 (77%)
Query: 83 ENERESERETERERERER 100
+ +RE +RET+R RER R
Sbjct: 99 DRDRERKRETDRNRERNR 116
>gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo
sapiens]
Length = 600
Score = 34.3 bits (77), Expect = 0.031
Identities = 16/46 (34%), Positives = 26/46 (56%)
Query: 56 SQCQKNCKLNHYKSRILCTHTHTHTHTENERESERETERERERERD 101
++ ++ + + + R T E ER SERETER++ERER+
Sbjct: 220 TETERKRQTDRERDRQRKTEREREKQAERERASERETERDKERERE 265
Score = 33.1 bits (74), Expect = 0.070
Identities = 16/34 (47%), Positives = 21/34 (61%)
Query: 68 KSRILCTHTHTHTHTENERESERETERERERERD 101
K R T TE +RE+ER+ ER+RERER+
Sbjct: 277 KERERQTDRKRQRRTERDRETERKRERQRERERE 310
Score = 33.1 bits (74), Expect = 0.070
Identities = 16/23 (69%), Positives = 17/23 (73%)
Query: 83 ENERESERETERERERERDWLKE 105
E ERE ERE ER+RE ERD KE
Sbjct: 318 ERERERERERERQRETERDREKE 340
Score = 32.7 bits (73), Expect = 0.092
Identities = 12/20 (60%), Positives = 18/20 (90%)
Query: 82 TENERESERETERERERERD 101
TE +R+ +RETE++RERE+D
Sbjct: 404 TEKDRDGQRETEKQREREKD 423
Score = 32.3 bits (72), Expect = 0.12
Identities = 13/19 (68%), Positives = 17/19 (89%)
Query: 83 ENERESERETERERERERD 101
E ERE +RETER+RE+ER+
Sbjct: 324 ERERERQRETERDREKERE 342
Score = 32.0 bits (71), Expect = 0.16
Identities = 13/18 (72%), Positives = 17/18 (94%)
Query: 84 NERESERETERERERERD 101
+ERE+ER+ ERERER+RD
Sbjct: 252 SERETERDKERERERDRD 269
Score = 32.0 bits (71), Expect = 0.16
Identities = 15/28 (53%), Positives = 19/28 (67%)
Query: 78 THTHTENERESERETERERERERDWLKE 105
T E ER+ ER+ ERERERER+ +E
Sbjct: 291 TERDRETERKRERQRERERERERNRKRE 318
Score = 31.6 bits (70), Expect = 0.20
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 75 HTHTHTHTENERESERETERERERERDWLKE 105
H H E +R+ E+E ER+ +RERD +E
Sbjct: 88 HRKRDRHRERQRDREKERERQTDRERDRQRE 118
Score = 31.2 bits (69), Expect = 0.27
Identities = 14/26 (53%), Positives = 18/26 (69%)
Query: 80 THTENERESERETERERERERDWLKE 105
T E R++ERE ERERER+R +E
Sbjct: 359 TGREGRRQAERERERERERDRQSARE 384
Score = 30.8 bits (68), Expect = 0.35
Identities = 12/19 (63%), Positives = 16/19 (84%)
Query: 83 ENERESERETERERERERD 101
E ER+ ERE ER+R+R+RD
Sbjct: 255 ETERDKERERERDRDRDRD 273
Score = 30.8 bits (68), Expect = 0.35
Identities = 14/25 (56%), Positives = 16/25 (64%)
Query: 76 THTHTHTENERESERETERERERER 100
T TE +RE +RE ERERER R
Sbjct: 291 TERDRETERKRERQRERERERERNR 315
Score = 30.8 bits (68), Expect = 0.35
Identities = 14/23 (60%), Positives = 17/23 (73%)
Query: 83 ENERESERETERERERERDWLKE 105
E ER +RE ERERERER+ +E
Sbjct: 310 ERERNRKRERERERERERERQRE 332
Score = 30.4 bits (67), Expect = 0.45
Identities = 12/28 (42%), Positives = 21/28 (75%)
Query: 78 THTHTENERESERETERERERERDWLKE 105
T T TE +R+++RE +R+R+ ER+ K+
Sbjct: 218 TETETERKRQTDRERDRQRKTEREREKQ 245
Score = 30.4 bits (67), Expect = 0.45
Identities = 14/23 (60%), Positives = 17/23 (73%)
Query: 83 ENERESERETERERERERDWLKE 105
E ERE ER +RERERER+ +E
Sbjct: 306 ERERERERNRKRERERERERERE 328
Score = 30.0 bits (66), Expect = 0.59
Identities = 12/23 (52%), Positives = 19/23 (82%)
Query: 83 ENERESERETERERERERDWLKE 105
E ER+++RE +R+RE+ER+ KE
Sbjct: 104 ERERQTDRERDRQREKERNRQKE 126
Score = 30.0 bits (66), Expect = 0.59
Identities = 14/32 (43%), Positives = 19/32 (59%)
Query: 74 THTHTHTHTENERESERETERERERERDWLKE 105
T T + ER+ ERE ERER R+R+ +E
Sbjct: 291 TERDRETERKRERQRERERERERNRKRERERE 322
Score = 30.0 bits (66), Expect = 0.59
Identities = 14/28 (50%), Positives = 18/28 (64%)
Query: 78 THTHTENERESERETERERERERDWLKE 105
T E +RE ERE ER R+RER+ +E
Sbjct: 297 TERKRERQRERERERERNRKRERERERE 324
Score = 29.6 bits (65), Expect = 0.78
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 75 HTHTHTHTENERESERETERERERERD 101
H+ E ERE+E ETER+R+ +R+
Sbjct: 205 HSERGRERERERETETETERKRQTDRE 231
Score = 29.6 bits (65), Expect = 0.78
Identities = 14/27 (51%), Positives = 17/27 (62%)
Query: 79 HTHTENERESERETERERERERDWLKE 105
H+ ERE ERETE E ER+R +E
Sbjct: 205 HSERGRERERERETETETERKRQTDRE 231
Score = 29.6 bits (65), Expect = 0.78
Identities = 14/37 (37%), Positives = 21/37 (56%)
Query: 74 THTHTHTHTENERESERETERERERERDWLKELCSLR 110
T T T + +RE +R+ + ERERE+ +E S R
Sbjct: 218 TETETERKRQTDRERDRQRKTEREREKQAERERASER 254
Score = 29.6 bits (65), Expect = 0.78
Identities = 14/30 (46%), Positives = 18/30 (60%)
Query: 76 THTHTHTENERESERETERERERERDWLKE 105
T + ERE ERE R+RERER+ +E
Sbjct: 297 TERKRERQRERERERERNRKRERERERERE 326
Score = 29.3 bits (64), Expect = 1.0
Identities = 13/23 (56%), Positives = 17/23 (73%)
Query: 83 ENERESERETERERERERDWLKE 105
E ERE+ERE ER R+R+ D +E
Sbjct: 126 ERERETEREGERGRDRQTDGQRE 148
Score = 29.3 bits (64), Expect = 1.0
Identities = 13/23 (56%), Positives = 17/23 (73%)
Query: 83 ENERESERETERERERERDWLKE 105
E ERE ERE +RE ER+R+ +E
Sbjct: 320 ERERERERERQRETERDREKERE 342
Score = 28.9 bits (63), Expect = 1.3
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 79 HTHTENERESERETERERERERDWLKE 105
H + +RE ERE + +RER+R KE
Sbjct: 94 HRERQRDREKERERQTDRERDRQREKE 120
Score = 28.9 bits (63), Expect = 1.3
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 76 THTHTHTENERESERETERERERERD 101
T + E ERE R+ RERER+R+
Sbjct: 171 TERNRQKEREREKNRQERRERERQRE 196
Score = 28.9 bits (63), Expect = 1.3
Identities = 13/26 (50%), Positives = 18/26 (69%)
Query: 80 THTENERESERETERERERERDWLKE 105
T + ERE +RE+ER RER R+ K+
Sbjct: 414 TEKQREREKDRESERGRERGREREKQ 439
Score = 28.5 bits (62), Expect = 1.7
Identities = 13/26 (50%), Positives = 17/26 (65%)
Query: 80 THTENERESERETERERERERDWLKE 105
T E E+++ERE ERE ERD +E
Sbjct: 238 TEREREKQAERERASERETERDKERE 263
Score = 28.5 bits (62), Expect = 1.7
Identities = 11/18 (61%), Positives = 16/18 (88%)
Query: 83 ENERESERETERERERER 100
E +RE+ER+ E+ERER+R
Sbjct: 328 ERQRETERDREKERERKR 345
Score = 28.1 bits (61), Expect = 2.3
Identities = 12/39 (30%), Positives = 21/39 (53%)
Query: 63 KLNHYKSRILCTHTHTHTHTENERESERETERERERERD 101
K + ++ R T+ ER+ +RE ER R++ER+
Sbjct: 90 KRDRHRERQRDREKERERQTDRERDRQREKERNRQKERE 128
Score = 28.1 bits (61), Expect = 2.3
Identities = 15/28 (53%), Positives = 19/28 (67%), Gaps = 2/28 (7%)
Query: 80 THTENERESERETE--RERERERDWLKE 105
T E ER +R+T+ RERER+RD KE
Sbjct: 131 TEREGERGRDRQTDGQRERERQRDAEKE 158
Score = 28.1 bits (61), Expect = 2.3
Identities = 11/22 (50%), Positives = 16/22 (72%)
Query: 80 THTENERESERETERERERERD 101
T + ERE +R+ E+ERER+ D
Sbjct: 143 TDGQRERERQRDAEKERERQTD 164
Score = 28.1 bits (61), Expect = 2.3
Identities = 17/42 (40%), Positives = 20/42 (47%)
Query: 59 QKNCKLNHYKSRILCTHTHTHTHTENERESERETERERERER 100
QK + K R T E +RESER ER RERE+
Sbjct: 397 QKERERQTEKDRDGQRETEKQREREKDRESERGRERGREREK 438
Score = 27.7 bits (60), Expect = 2.9
Identities = 11/26 (42%), Positives = 18/26 (69%)
Query: 80 THTENERESERETERERERERDWLKE 105
T E +R+ E+E R++ERER+ +E
Sbjct: 109 TDRERDRQREKERNRQKERERETERE 134
Score = 27.7 bits (60), Expect = 2.9
Identities = 12/17 (70%), Positives = 14/17 (82%)
Query: 85 ERESERETERERERERD 101
++E ERETERE ER RD
Sbjct: 124 QKERERETEREGERGRD 140
Score = 27.7 bits (60), Expect = 2.9
Identities = 10/19 (52%), Positives = 16/19 (84%)
Query: 82 TENERESERETERERERER 100
TE ++E ERE +R+R+R+R
Sbjct: 256 TERDKERERERDRDRDRDR 274
Score = 27.7 bits (60), Expect = 2.9
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 74 THTHTHTHTENERESERETERERERERD 101
T + + RE R+ ERERERER+
Sbjct: 349 TEMDRERNRQTGREGRRQAERERERERE 376
Score = 27.3 bits (59), Expect = 3.8
Identities = 10/17 (58%), Positives = 16/17 (94%)
Query: 85 ERESERETERERERERD 101
+R++ERET+R+RER R+
Sbjct: 68 KRQTERETDRKRERRRE 84
Score = 27.3 bits (59), Expect = 3.8
Identities = 10/22 (45%), Positives = 17/22 (77%)
Query: 80 THTENERESERETERERERERD 101
T E +R++ER ++ERERE++
Sbjct: 163 TDRERQRQTERNRQKEREREKN 184
Score = 27.3 bits (59), Expect = 3.8
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 78 THTHTENERESERETERERERERDWLKE 105
T + E +RETER+RER+R+ +E
Sbjct: 283 TDRKRQRRTERDRETERKRERQRERERE 310
Score = 27.3 bits (59), Expect = 3.8
Identities = 11/20 (55%), Positives = 15/20 (75%)
Query: 82 TENERESERETERERERERD 101
TE +RE ERE +R+R+ E D
Sbjct: 333 TERDREKERERKRKRQTEMD 352
Score = 26.9 bits (58), Expect = 5.0
Identities = 11/24 (45%), Positives = 17/24 (70%)
Query: 82 TENERESERETERERERERDWLKE 105
T+ +RE ER+ + E+ERER +E
Sbjct: 143 TDGQRERERQRDAEKERERQTDRE 166
Score = 26.9 bits (58), Expect = 5.0
Identities = 9/19 (47%), Positives = 16/19 (84%)
Query: 83 ENERESERETERERERERD 101
+ +RE +R+TER R++ER+
Sbjct: 162 QTDRERQRQTERNRQKERE 180
Score = 26.9 bits (58), Expect = 5.0
Identities = 16/32 (50%), Positives = 18/32 (56%), Gaps = 9/32 (28%)
Query: 83 ENERESERE---------TERERERERDWLKE 105
E ERE ERE ERER+R+RD KE
Sbjct: 368 ERERERERERDRQSAREREERERDRDRDRQKE 399
Score = 26.6 bits (57), Expect = 6.6
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 78 THTHTENERESERETERERERERDWLKE 105
T + + ERE E+ + RERER KE
Sbjct: 171 TERNRQKEREREKNRQERRERERQREKE 198
Score = 26.2 bits (56), Expect = 8.6
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 76 THTHTHTENERESERETERERERERDWLKE 105
T E ER+ +R+TE +RER R +E
Sbjct: 333 TERDREKERERKRKRQTEMDRERNRQTGRE 362
Score = 26.2 bits (56), Expect = 8.6
Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 10/30 (33%)
Query: 82 TENERESERET----------ERERERERD 101
TE +RE R+T ERERERERD
Sbjct: 349 TEMDRERNRQTGREGRRQAERERERERERD 378
>gi|31377595 zinc finger CCCH-type containing 18 [Homo sapiens]
Length = 953
Score = 34.3 bits (77), Expect = 0.031
Identities = 21/40 (52%), Positives = 24/40 (60%), Gaps = 4/40 (10%)
Query: 70 RILCTHTHT-HTHTENERESERET---ERERERERDWLKE 105
R+ T T H + E ERE ERE ERERERERD +E
Sbjct: 389 RVQYTETEPYHNYRERERERERENRQRERERERERDRERE 428
Score = 28.9 bits (63), Expect = 1.3
Identities = 13/26 (50%), Positives = 19/26 (73%), Gaps = 3/26 (11%)
Query: 83 ENERESERETERERERER---DWLKE 105
+ ERE ERE ER++ER+R +W +E
Sbjct: 431 QREREREREHERDKERQRRKEEWERE 456
Score = 26.9 bits (58), Expect = 5.0
Identities = 11/18 (61%), Positives = 14/18 (77%)
Query: 83 ENERESERETERERERER 100
+ ERE ERE +RERER +
Sbjct: 414 QRERERERERDRERERRQ 431
Score = 26.2 bits (56), Expect = 8.6
Identities = 15/26 (57%), Positives = 17/26 (65%), Gaps = 3/26 (11%)
Query: 83 ENERESERET---ERERERERDWLKE 105
E ER+ ERE ERERERE + KE
Sbjct: 420 ERERDRERERRQREREREREHERDKE 445
>gi|197333879 genetic suppressor element 1 isoform 2 [Homo sapiens]
Length = 1113
Score = 33.5 bits (75), Expect = 0.054
Identities = 15/24 (62%), Positives = 19/24 (79%)
Query: 83 ENERESERETERERERERDWLKEL 106
E ERE ERE E+ERERE++ +EL
Sbjct: 258 EREREKEREQEKEREREKEREREL 281
Score = 32.3 bits (72), Expect = 0.12
Identities = 14/23 (60%), Positives = 19/23 (82%)
Query: 83 ENERESERETERERERERDWLKE 105
E ERE++RE E+ERERER+ +E
Sbjct: 244 EREREADREREKEREREREKERE 266
Score = 32.3 bits (72), Expect = 0.12
Identities = 15/23 (65%), Positives = 18/23 (78%)
Query: 83 ENERESERETERERERERDWLKE 105
E ERE ERE ERE+E+ER+ KE
Sbjct: 254 EKEREREREKEREQEKEREREKE 276
Score = 32.0 bits (71), Expect = 0.16
Identities = 14/23 (60%), Positives = 18/23 (78%)
Query: 83 ENERESERETERERERERDWLKE 105
E ERE ERE +RERE+ER+ +E
Sbjct: 240 EREREREREADREREKERERERE 262
Score = 31.2 bits (69), Expect = 0.27
Identities = 14/23 (60%), Positives = 18/23 (78%)
Query: 83 ENERESERETERERERERDWLKE 105
E +RE E+E ERERE+ER+ KE
Sbjct: 248 EADREREKEREREREKEREQEKE 270
Score = 30.4 bits (67), Expect = 0.45
Identities = 14/23 (60%), Positives = 17/23 (73%)
Query: 83 ENERESERETERERERERDWLKE 105
E ERE ERE ERE +RER+ +E
Sbjct: 236 EREREREREREREADREREKERE 258
Score = 30.4 bits (67), Expect = 0.45
Identities = 14/23 (60%), Positives = 17/23 (73%)
Query: 83 ENERESERETERERERERDWLKE 105
E ERE E + ERE+ERER+ KE
Sbjct: 242 EREREREADREREKEREREREKE 264
Score = 30.4 bits (67), Expect = 0.45
Identities = 13/23 (56%), Positives = 18/23 (78%)
Query: 83 ENERESERETERERERERDWLKE 105
+ ERE ERE ERE+ERE++ +E
Sbjct: 250 DREREKEREREREKEREQEKERE 272
Score = 30.0 bits (66), Expect = 0.59
Identities = 15/23 (65%), Positives = 16/23 (69%)
Query: 83 ENERESERETERERERERDWLKE 105
E RE ERE ERERERE D +E
Sbjct: 232 ELRREREREREREREREADRERE 254
Score = 30.0 bits (66), Expect = 0.59
Identities = 13/23 (56%), Positives = 18/23 (78%)
Query: 83 ENERESERETERERERERDWLKE 105
E ERE E+E E+E+ERER+ +E
Sbjct: 256 EREREREKEREQEKEREREKERE 278
Score = 29.3 bits (64), Expect = 1.0
Identities = 13/23 (56%), Positives = 17/23 (73%)
Query: 83 ENERESERETERERERERDWLKE 105
E ERE ERE E +RERE++ +E
Sbjct: 238 EREREREREREADREREKERERE 260
Score = 29.3 bits (64), Expect = 1.0
Identities = 13/23 (56%), Positives = 17/23 (73%)
Query: 83 ENERESERETERERERERDWLKE 105
E E+E ERE E+ERERE + +E
Sbjct: 264 EREQEKEREREKERERELERQRE 286
Score = 28.9 bits (63), Expect = 1.3
Identities = 12/23 (52%), Positives = 18/23 (78%)
Query: 83 ENERESERETERERERERDWLKE 105
E E+E ERE E+ERE+E++ +E
Sbjct: 252 EREKEREREREKEREQEKERERE 274
Score = 28.1 bits (61), Expect = 2.3
Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 12/55 (21%)
Query: 83 ENERESERETERERERE-RDWLKELCS--------LRIPKIYSLE---AEDPGKP 125
E ERE ERE E ER+RE R KEL + L + +++ L E+ GKP
Sbjct: 270 EREREKERERELERQREQRAREKELLAAKALEPSFLPVAELHGLRGHATEERGKP 324
Score = 27.7 bits (60), Expect = 2.9
Identities = 12/19 (63%), Positives = 14/19 (73%)
Query: 83 ENERESERETERERERERD 101
+ E ERE ERERERER+
Sbjct: 230 DEELRRERERERERERERE 248
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.134 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,298,109
Number of Sequences: 37866
Number of extensions: 217500
Number of successful extensions: 3092
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 114
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 1493
Number of HSP's gapped (non-prelim): 1101
length of query: 135
length of database: 18,247,518
effective HSP length: 91
effective length of query: 44
effective length of database: 14,801,712
effective search space: 651275328
effective search space used: 651275328
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.