Search of human proteins with 169205907

Search of human proteins with 169205907

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|169205907 PREDICTED: similar to hCG1791648 [Homo sapiens]
         (127 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169205907 PREDICTED: similar to hCG1791648 [Homo sapiens]          253   3e-68
gi|169206451 PREDICTED: similar to hCG1791648 [Homo sapiens]          251   1e-67
gi|169206069 PREDICTED: similar to hCG1791648 [Homo sapiens]          249   5e-67
gi|51242945 striatin, calmodulin binding protein [Homo sapiens]       119   5e-28
gi|142976686 nuclear autoantigen isoform 1 [Homo sapiens]             108   1e-24
gi|142976675 nuclear autoantigen isoform 2 [Homo sapiens]             108   1e-24
gi|89886480 zinedin isoform 2 [Homo sapiens]                           96   1e-20
gi|89886477 zinedin isoform 1 [Homo sapiens]                           96   1e-20
gi|61742793 lymphocyte-specific protein 1 isoform 2 [Homo sapiens]     57   5e-09
gi|61742791 lymphocyte-specific protein 1 isoform 2 [Homo sapiens]     57   5e-09
gi|61742789 lymphocyte-specific protein 1 isoform 2 [Homo sapiens]     57   5e-09
gi|10880979 lymphocyte-specific protein 1 isoform 1 [Homo sapiens]     57   5e-09
gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens]     29   0.85 
gi|13376725 coiled-coil domain containing 92 [Homo sapiens]            29   1.1  
gi|110349719 titin isoform N2-A [Homo sapiens]                         28   1.5  
gi|110349717 titin isoform novex-2 [Homo sapiens]                      28   1.5  
gi|110349713 titin isoform novex-1 [Homo sapiens]                      28   1.5  
gi|110349715 titin isoform N2-B [Homo sapiens]                         28   1.5  
gi|15559211 RE1-silencing transcription factor [Homo sapiens]          28   1.5  
gi|149363664 septin 8 isoform d [Homo sapiens]                         28   1.5  
gi|149363638 septin 8 isoform c [Homo sapiens]                         28   1.5  
gi|149363689 septin 8 isoform a [Homo sapiens]                         28   1.5  
gi|149363661 septin 8 isoform b [Homo sapiens]                         28   1.5  
gi|148664197 coiled-coil domain containing 40 [Homo sapiens]           28   1.5  
gi|197209857 adaptor-related protein complex 3, mu 2 subunit [Ho...    28   1.9  
gi|5803000 adaptor-related protein complex 3, mu 2 subunit [Homo...    28   1.9  
gi|239754909 PREDICTED: hypothetical protein [Homo sapiens]            28   1.9  
gi|20336205 transcriptional regulator ATRX isoform 2 [Homo sapiens]    28   1.9  
gi|20336209 transcriptional regulator ATRX isoform 1 [Homo sapiens]    28   1.9  
gi|93102405 hypothetical protein LOC84182 [Homo sapiens]               28   2.5  

>gi|169205907 PREDICTED: similar to hCG1791648 [Homo sapiens]
          Length = 127

 Score =  253 bits (646), Expect = 3e-68
 Identities = 127/127 (100%), Positives = 127/127 (100%)

Query: 1   MAVASTKSRWETGEVQAQSATKTPSCKAQIAFLQGERKDQENLKKDLVRKIKMLEYALKQ 60
           MAVASTKSRWETGEVQAQSATKTPSCKAQIAFLQGERKDQENLKKDLVRKIKMLEYALKQ
Sbjct: 1   MAVASTKSRWETGEVQAQSATKTPSCKAQIAFLQGERKDQENLKKDLVRKIKMLEYALKQ 60

Query: 61  KRAKYHKLKYGRELNQGDMKPPSYDSDSTLTKQPVNVKTRSTTTQTKVVQFLQITTEDSS 120
           KRAKYHKLKYGRELNQGDMKPPSYDSDSTLTKQPVNVKTRSTTTQTKVVQFLQITTEDSS
Sbjct: 61  KRAKYHKLKYGRELNQGDMKPPSYDSDSTLTKQPVNVKTRSTTTQTKVVQFLQITTEDSS 120

Query: 121 VDPPQMR 127
           VDPPQMR
Sbjct: 121 VDPPQMR 127


>gi|169206451 PREDICTED: similar to hCG1791648 [Homo sapiens]
          Length = 127

 Score =  251 bits (641), Expect = 1e-67
 Identities = 126/127 (99%), Positives = 126/127 (99%)

Query: 1   MAVASTKSRWETGEVQAQSATKTPSCKAQIAFLQGERKDQENLKKDLVRKIKMLEYALKQ 60
           MAVASTKSRWETGEVQAQSA KTPSCKAQIAFLQGERKDQENLKKDLVRKIKMLEYALKQ
Sbjct: 1   MAVASTKSRWETGEVQAQSAAKTPSCKAQIAFLQGERKDQENLKKDLVRKIKMLEYALKQ 60

Query: 61  KRAKYHKLKYGRELNQGDMKPPSYDSDSTLTKQPVNVKTRSTTTQTKVVQFLQITTEDSS 120
           KRAKYHKLKYGRELNQGDMKPPSYDSDSTLTKQPVNVKTRSTTTQTKVVQFLQITTEDSS
Sbjct: 61  KRAKYHKLKYGRELNQGDMKPPSYDSDSTLTKQPVNVKTRSTTTQTKVVQFLQITTEDSS 120

Query: 121 VDPPQMR 127
           VDPPQMR
Sbjct: 121 VDPPQMR 127


>gi|169206069 PREDICTED: similar to hCG1791648 [Homo sapiens]
          Length = 127

 Score =  249 bits (635), Expect = 5e-67
 Identities = 125/127 (98%), Positives = 125/127 (98%)

Query: 1   MAVASTKSRWETGEVQAQSATKTPSCKAQIAFLQGERKDQENLKKDLVRKIKMLEYALKQ 60
           MAVASTKSRWETGEVQAQSA KTPSCKAQIAFLQGERKDQENLKKDLVRKIKMLEYALKQ
Sbjct: 1   MAVASTKSRWETGEVQAQSAAKTPSCKAQIAFLQGERKDQENLKKDLVRKIKMLEYALKQ 60

Query: 61  KRAKYHKLKYGRELNQGDMKPPSYDSDSTLTKQPVNVKTRSTTTQTKVVQFLQITTEDSS 120
           KRAKYHKLKYGRELNQGDMKPP YDSDSTLTKQPVNVKTRSTTTQTKVVQFLQITTEDSS
Sbjct: 61  KRAKYHKLKYGRELNQGDMKPPIYDSDSTLTKQPVNVKTRSTTTQTKVVQFLQITTEDSS 120

Query: 121 VDPPQMR 127
           VDPPQMR
Sbjct: 121 VDPPQMR 127


>gi|51242945 striatin, calmodulin binding protein [Homo sapiens]
          Length = 780

 Score =  119 bits (299), Expect = 5e-28
 Identities = 61/79 (77%), Positives = 66/79 (83%), Gaps = 1/79 (1%)

Query: 10  WETGEVQ-AQSATKTPSCKAQIAFLQGERKDQENLKKDLVRKIKMLEYALKQKRAKYHKL 68
           W   EV+ AQ   +    +AQIAFLQGERK QENLKKDLVR+IKMLEYALKQ+RAKYHKL
Sbjct: 60  WARFEVERAQWEVERAELQAQIAFLQGERKGQENLKKDLVRRIKMLEYALKQERAKYHKL 119

Query: 69  KYGRELNQGDMKPPSYDSD 87
           KYG ELNQGDMKPPSYDSD
Sbjct: 120 KYGTELNQGDMKPPSYDSD 138


>gi|142976686 nuclear autoantigen isoform 1 [Homo sapiens]
          Length = 797

 Score =  108 bits (269), Expect = 1e-24
 Identities = 57/107 (53%), Positives = 71/107 (66%), Gaps = 9/107 (8%)

Query: 7   KSRWETGEVQAQSATKTPSCKAQIAFLQGERKDQENLKKDLVRKIKMLEYALKQKRAKYH 66
           ++ WE    + Q         A+IAFLQGERK QENLKKDLVR+IKMLEYALKQ+RAKYH
Sbjct: 83  RAHWEVERAELQ---------ARIAFLQGERKGQENLKKDLVRRIKMLEYALKQERAKYH 133

Query: 67  KLKYGRELNQGDMKPPSYDSDSTLTKQPVNVKTRSTTTQTKVVQFLQ 113
           KLKYG ELNQGD+K P+++S+ T   +       S  T  +  Q L+
Sbjct: 134 KLKYGTELNQGDLKMPTFESEETKDTEAPTAPQNSQLTWKQGRQLLR 180


>gi|142976675 nuclear autoantigen isoform 2 [Homo sapiens]
          Length = 713

 Score =  108 bits (269), Expect = 1e-24
 Identities = 57/107 (53%), Positives = 71/107 (66%), Gaps = 9/107 (8%)

Query: 7   KSRWETGEVQAQSATKTPSCKAQIAFLQGERKDQENLKKDLVRKIKMLEYALKQKRAKYH 66
           ++ WE    + Q         A+IAFLQGERK QENLKKDLVR+IKMLEYALKQ+RAKYH
Sbjct: 83  RAHWEVERAELQ---------ARIAFLQGERKGQENLKKDLVRRIKMLEYALKQERAKYH 133

Query: 67  KLKYGRELNQGDMKPPSYDSDSTLTKQPVNVKTRSTTTQTKVVQFLQ 113
           KLKYG ELNQGD+K P+++S+ T   +       S  T  +  Q L+
Sbjct: 134 KLKYGTELNQGDLKMPTFESEETKDTEAPTAPQNSQLTWKQGRQLLR 180


>gi|89886480 zinedin isoform 2 [Homo sapiens]
          Length = 760

 Score = 95.5 bits (236), Expect = 1e-20
 Identities = 48/74 (64%), Positives = 56/74 (75%), Gaps = 9/74 (12%)

Query: 7   KSRWETGEVQAQSATKTPSCKAQIAFLQGERKDQENLKKDLVRKIKMLEYALKQKRAKYH 66
           K+RWE    + Q         AQ+AFLQGERK QENLK DLVR+IKMLEYALKQ+RAKYH
Sbjct: 83  KARWEAERAELQ---------AQVAFLQGERKGQENLKTDLVRRIKMLEYALKQERAKYH 133

Query: 67  KLKYGRELNQGDMK 80
           KLK+G +LNQG+ K
Sbjct: 134 KLKFGTDLNQGEKK 147


>gi|89886477 zinedin isoform 1 [Homo sapiens]
          Length = 753

 Score = 95.5 bits (236), Expect = 1e-20
 Identities = 48/74 (64%), Positives = 56/74 (75%), Gaps = 9/74 (12%)

Query: 7   KSRWETGEVQAQSATKTPSCKAQIAFLQGERKDQENLKKDLVRKIKMLEYALKQKRAKYH 66
           K+RWE    + Q         AQ+AFLQGERK QENLK DLVR+IKMLEYALKQ+RAKYH
Sbjct: 83  KARWEAERAELQ---------AQVAFLQGERKGQENLKTDLVRRIKMLEYALKQERAKYH 133

Query: 67  KLKYGRELNQGDMK 80
           KLK+G +LNQG+ K
Sbjct: 134 KLKFGTDLNQGEKK 147


>gi|61742793 lymphocyte-specific protein 1 isoform 2 [Homo sapiens]
          Length = 277

 Score = 56.6 bits (135), Expect = 5e-09
 Identities = 27/31 (87%), Positives = 28/31 (90%)

Query: 1   MAVASTKSRWETGEVQAQSATKTPSCKAQIA 31
           MAVASTKSRWETGEVQAQSA KTPSCK  +A
Sbjct: 196 MAVASTKSRWETGEVQAQSAAKTPSCKDIVA 226


>gi|61742791 lymphocyte-specific protein 1 isoform 2 [Homo sapiens]
          Length = 277

 Score = 56.6 bits (135), Expect = 5e-09
 Identities = 27/31 (87%), Positives = 28/31 (90%)

Query: 1   MAVASTKSRWETGEVQAQSATKTPSCKAQIA 31
           MAVASTKSRWETGEVQAQSA KTPSCK  +A
Sbjct: 196 MAVASTKSRWETGEVQAQSAAKTPSCKDIVA 226


>gi|61742789 lymphocyte-specific protein 1 isoform 2 [Homo sapiens]
          Length = 277

 Score = 56.6 bits (135), Expect = 5e-09
 Identities = 27/31 (87%), Positives = 28/31 (90%)

Query: 1   MAVASTKSRWETGEVQAQSATKTPSCKAQIA 31
           MAVASTKSRWETGEVQAQSA KTPSCK  +A
Sbjct: 196 MAVASTKSRWETGEVQAQSAAKTPSCKDIVA 226


>gi|10880979 lymphocyte-specific protein 1 isoform 1 [Homo sapiens]
          Length = 339

 Score = 56.6 bits (135), Expect = 5e-09
 Identities = 27/31 (87%), Positives = 28/31 (90%)

Query: 1   MAVASTKSRWETGEVQAQSATKTPSCKAQIA 31
           MAVASTKSRWETGEVQAQSA KTPSCK  +A
Sbjct: 258 MAVASTKSRWETGEVQAQSAAKTPSCKDIVA 288


>gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens]
          Length = 1960

 Score = 29.3 bits (64), Expect = 0.85
 Identities = 17/56 (30%), Positives = 28/56 (50%)

Query: 33   LQGERKDQENLKKDLVRKIKMLEYALKQKRAKYHKLKYGRELNQGDMKPPSYDSDS 88
            LQG  +  E  KK LVR+++ +E  L+ +R +       R+  + D+K      DS
Sbjct: 1573 LQGRDEQSEEKKKQLVRQVREMEAELEDERKQRSMAVAARKKLEMDLKDLEAHIDS 1628


>gi|13376725 coiled-coil domain containing 92 [Homo sapiens]
          Length = 331

 Score = 28.9 bits (63), Expect = 1.1
 Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 3/64 (4%)

Query: 5   STKSRWETGEVQAQSATKTPSCKAQIAFLQGERKDQENLKKDLVRK---IKMLEYALKQK 61
           + KS  +TG+  ++S+     C+   A L+ +  +   L K+L +K   I +LE  +K++
Sbjct: 67  TVKSSEQTGDGTSKSSELKKRCEELEAQLKVKENENAELLKELEQKNAMITVLENTIKER 126

Query: 62  RAKY 65
             KY
Sbjct: 127 EKKY 130


>gi|110349719 titin isoform N2-A [Homo sapiens]
          Length = 33423

 Score = 28.5 bits (62), Expect = 1.5
 Identities = 31/118 (26%), Positives = 50/118 (42%), Gaps = 13/118 (11%)

Query: 11    ETGEVQAQSATKTPSCKAQIAFLQGERKDQENLKKDLVRKIKMLEYALK----QKRAKYH 66
             ETG+   +   KT S  A++     ER D+      L  ++K +   +      + +   
Sbjct: 13436 ETGD---RVKMKTLSAYAELVISPSERSDKGIYTLKLENRVKTISGEIDVNVIARPSAPK 13492

Query: 67    KLKYG---RELNQGDMKPPSYDSDSTLTKQPVNVKTRSTTTQTKVVQF---LQITTED 118
             +LK+G   ++      +PP  D  S LT   V  +  S  T TKV+ F   L+ T  D
Sbjct: 13493 ELKFGDITKDSVHLTWEPPDDDGGSPLTGYVVEKREVSRKTWTKVMDFVTDLEFTVPD 13550


>gi|110349717 titin isoform novex-2 [Homo sapiens]
          Length = 27118

 Score = 28.5 bits (62), Expect = 1.5
 Identities = 31/118 (26%), Positives = 50/118 (42%), Gaps = 13/118 (11%)

Query: 11   ETGEVQAQSATKTPSCKAQIAFLQGERKDQENLKKDLVRKIKMLEYALK----QKRAKYH 66
            ETG+   +   KT S  A++     ER D+      L  ++K +   +      + +   
Sbjct: 7131 ETGD---RVKMKTLSAYAELVISPSERSDKGIYTLKLENRVKTISGEIDVNVIARPSAPK 7187

Query: 67   KLKYG---RELNQGDMKPPSYDSDSTLTKQPVNVKTRSTTTQTKVVQF---LQITTED 118
            +LK+G   ++      +PP  D  S LT   V  +  S  T TKV+ F   L+ T  D
Sbjct: 7188 ELKFGDITKDSVHLTWEPPDDDGGSPLTGYVVEKREVSRKTWTKVMDFVTDLEFTVPD 7245


>gi|110349713 titin isoform novex-1 [Homo sapiens]
          Length = 27051

 Score = 28.5 bits (62), Expect = 1.5
 Identities = 31/118 (26%), Positives = 50/118 (42%), Gaps = 13/118 (11%)

Query: 11   ETGEVQAQSATKTPSCKAQIAFLQGERKDQENLKKDLVRKIKMLEYALK----QKRAKYH 66
            ETG+   +   KT S  A++     ER D+      L  ++K +   +      + +   
Sbjct: 7064 ETGD---RVKMKTLSAYAELVISPSERSDKGIYTLKLENRVKTISGEIDVNVIARPSAPK 7120

Query: 67   KLKYG---RELNQGDMKPPSYDSDSTLTKQPVNVKTRSTTTQTKVVQF---LQITTED 118
            +LK+G   ++      +PP  D  S LT   V  +  S  T TKV+ F   L+ T  D
Sbjct: 7121 ELKFGDITKDSVHLTWEPPDDDGGSPLTGYVVEKREVSRKTWTKVMDFVTDLEFTVPD 7178


>gi|110349715 titin isoform N2-B [Homo sapiens]
          Length = 26926

 Score = 28.5 bits (62), Expect = 1.5
 Identities = 31/118 (26%), Positives = 50/118 (42%), Gaps = 13/118 (11%)

Query: 11   ETGEVQAQSATKTPSCKAQIAFLQGERKDQENLKKDLVRKIKMLEYALK----QKRAKYH 66
            ETG+   +   KT S  A++     ER D+      L  ++K +   +      + +   
Sbjct: 6939 ETGD---RVKMKTLSAYAELVISPSERSDKGIYTLKLENRVKTISGEIDVNVIARPSAPK 6995

Query: 67   KLKYG---RELNQGDMKPPSYDSDSTLTKQPVNVKTRSTTTQTKVVQF---LQITTED 118
            +LK+G   ++      +PP  D  S LT   V  +  S  T TKV+ F   L+ T  D
Sbjct: 6996 ELKFGDITKDSVHLTWEPPDDDGGSPLTGYVVEKREVSRKTWTKVMDFVTDLEFTVPD 7053


>gi|15559211 RE1-silencing transcription factor [Homo sapiens]
          Length = 1097

 Score = 28.5 bits (62), Expect = 1.5
 Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 3/71 (4%)

Query: 59  KQKRAKYHKLKYGRELNQGDMKPPSYDSDSTLTKQPVNVKT---RSTTTQTKVVQFLQIT 115
           K+K+ +       +E+ +GD K       +T  K+    KT   +S+   +K  Q   + 
Sbjct: 543 KKKKVESKSKNNSQEVPKGDSKVEENKKQNTCMKKSTKKKTLKNKSSKKSSKPPQKEPVE 602

Query: 116 TEDSSVDPPQM 126
              + +DPPQM
Sbjct: 603 KGSAQMDPPQM 613


>gi|149363664 septin 8 isoform d [Homo sapiens]
          Length = 369

 Score = 28.5 bits (62), Expect = 1.5
 Identities = 18/69 (26%), Positives = 37/69 (53%), Gaps = 2/69 (2%)

Query: 13  GEVQAQSATKTPSCKAQIAFLQGERKDQENLKKDLVRKIKMLEYALKQKRAKYH-KLKYG 71
           G+ Q  S  +T   K +  FL   ++ +E +++  V K+K  E  LK+K  + H K ++ 
Sbjct: 255 GDSQPFSLQETYEAKRK-EFLSELQRKEEEMRQMFVNKVKETELELKEKERELHEKFEHL 313

Query: 72  RELNQGDMK 80
           + ++Q + +
Sbjct: 314 KRVHQEEKR 322


>gi|149363638 septin 8 isoform c [Homo sapiens]
          Length = 442

 Score = 28.5 bits (62), Expect = 1.5
 Identities = 18/69 (26%), Positives = 37/69 (53%), Gaps = 2/69 (2%)

Query: 13  GEVQAQSATKTPSCKAQIAFLQGERKDQENLKKDLVRKIKMLEYALKQKRAKYH-KLKYG 71
           G+ Q  S  +T   K +  FL   ++ +E +++  V K+K  E  LK+K  + H K ++ 
Sbjct: 315 GDSQPFSLQETYEAKRK-EFLSELQRKEEEMRQMFVNKVKETELELKEKERELHEKFEHL 373

Query: 72  RELNQGDMK 80
           + ++Q + +
Sbjct: 374 KRVHQEEKR 382


>gi|149363689 septin 8 isoform a [Homo sapiens]
          Length = 483

 Score = 28.5 bits (62), Expect = 1.5
 Identities = 18/69 (26%), Positives = 37/69 (53%), Gaps = 2/69 (2%)

Query: 13  GEVQAQSATKTPSCKAQIAFLQGERKDQENLKKDLVRKIKMLEYALKQKRAKYH-KLKYG 71
           G+ Q  S  +T   K +  FL   ++ +E +++  V K+K  E  LK+K  + H K ++ 
Sbjct: 315 GDSQPFSLQETYEAKRK-EFLSELQRKEEEMRQMFVNKVKETELELKEKERELHEKFEHL 373

Query: 72  RELNQGDMK 80
           + ++Q + +
Sbjct: 374 KRVHQEEKR 382


>gi|149363661 septin 8 isoform b [Homo sapiens]
          Length = 429

 Score = 28.5 bits (62), Expect = 1.5
 Identities = 18/69 (26%), Positives = 37/69 (53%), Gaps = 2/69 (2%)

Query: 13  GEVQAQSATKTPSCKAQIAFLQGERKDQENLKKDLVRKIKMLEYALKQKRAKYH-KLKYG 71
           G+ Q  S  +T   K +  FL   ++ +E +++  V K+K  E  LK+K  + H K ++ 
Sbjct: 315 GDSQPFSLQETYEAKRK-EFLSELQRKEEEMRQMFVNKVKETELELKEKERELHEKFEHL 373

Query: 72  RELNQGDMK 80
           + ++Q + +
Sbjct: 374 KRVHQEEKR 382


>gi|148664197 coiled-coil domain containing 40 [Homo sapiens]
          Length = 1142

 Score = 28.5 bits (62), Expect = 1.5
 Identities = 29/126 (23%), Positives = 55/126 (43%), Gaps = 18/126 (14%)

Query: 2   AVASTKSRWETGEVQAQSATKTPSCKA------QIAFLQGERKD-------QENLKKDLV 48
           A+AS++ R +  E+QA  A  T +C A      ++A LQ E ++        +N+ +D+ 
Sbjct: 353 AMASSERRQKEEELQAARALYTKTCAAANEERKKLAALQTEMENLALHLFYMQNIDQDMR 412

Query: 49  RKIKMLEYALKQK-----RAKYHKLKYGRELNQGDMKPPSYDSDSTLTKQPVNVKTRSTT 103
             I+++   +K+      RA+  K K    ++Q   +    + D  L +     +   T 
Sbjct: 413 DDIRVMTQVVKKAETERIRAEIEKKKQDLYVDQLTTRAQQLEEDIALFEAQYLAQAEDTR 472

Query: 104 TQTKVV 109
              K V
Sbjct: 473 ILRKAV 478


>gi|197209857 adaptor-related protein complex 3, mu 2 subunit [Homo
           sapiens]
          Length = 418

 Score = 28.1 bits (61), Expect = 1.9
 Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 4/62 (6%)

Query: 10  WETGEVQAQSATKTPSCKAQIAFLQGERKDQENLKKDLVRKIKMLEYA-LKQKRAKYHKL 68
           W+ G++  Q   K PS K  ++   G  K  EN   +L  KI+ L  + LK  R   +  
Sbjct: 341 WDVGKINPQ---KLPSLKGTMSLQAGASKPDENPTINLQFKIQQLAISGLKVNRLDMYGE 397

Query: 69  KY 70
           KY
Sbjct: 398 KY 399


>gi|5803000 adaptor-related protein complex 3, mu 2 subunit [Homo
           sapiens]
          Length = 418

 Score = 28.1 bits (61), Expect = 1.9
 Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 4/62 (6%)

Query: 10  WETGEVQAQSATKTPSCKAQIAFLQGERKDQENLKKDLVRKIKMLEYA-LKQKRAKYHKL 68
           W+ G++  Q   K PS K  ++   G  K  EN   +L  KI+ L  + LK  R   +  
Sbjct: 341 WDVGKINPQ---KLPSLKGTMSLQAGASKPDENPTINLQFKIQQLAISGLKVNRLDMYGE 397

Query: 69  KY 70
           KY
Sbjct: 398 KY 399


>gi|239754909 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 245

 Score = 28.1 bits (61), Expect = 1.9
 Identities = 16/44 (36%), Positives = 24/44 (54%)

Query: 34  QGERKDQENLKKDLVRKIKMLEYALKQKRAKYHKLKYGRELNQG 77
           +GERK +E  +K   R+ +  E   K+KR K  K + GR   +G
Sbjct: 87  KGERKKEERERKKRRREKENKEGEEKEKRKKKEKKERGRTSKEG 130


>gi|20336205 transcriptional regulator ATRX isoform 2 [Homo sapiens]
          Length = 2454

 Score = 28.1 bits (61), Expect = 1.9
 Identities = 17/57 (29%), Positives = 28/57 (49%)

Query: 12  TGEVQAQSATKTPSCKAQIAFLQGERKDQENLKKDLVRKIKMLEYALKQKRAKYHKL 68
           T   +  SATK    KA  + L   +K    L++DL  + + ++   K+K  K HK+
Sbjct: 340 TDNSEISSATKLRQLKAFKSVLADIKKAHLALEEDLNSEFRAMDAVNKEKNTKEHKV 396


>gi|20336209 transcriptional regulator ATRX isoform 1 [Homo sapiens]
          Length = 2492

 Score = 28.1 bits (61), Expect = 1.9
 Identities = 17/57 (29%), Positives = 28/57 (49%)

Query: 12  TGEVQAQSATKTPSCKAQIAFLQGERKDQENLKKDLVRKIKMLEYALKQKRAKYHKL 68
           T   +  SATK    KA  + L   +K    L++DL  + + ++   K+K  K HK+
Sbjct: 378 TDNSEISSATKLRQLKAFKSVLADIKKAHLALEEDLNSEFRAMDAVNKEKNTKEHKV 434


>gi|93102405 hypothetical protein LOC84182 [Homo sapiens]
          Length = 757

 Score = 27.7 bits (60), Expect = 2.5
 Identities = 25/97 (25%), Positives = 43/97 (44%), Gaps = 16/97 (16%)

Query: 39  DQENLKKDL-------VRKIKMLEYALKQKRAKYHKLKYGRE------LNQGDMKPPSYD 85
           DQE  + DL       +RK+  LE+  K+ +AK + LK   E      L+       ++ 
Sbjct: 31  DQERPRSDLSINNRNDLRKVLHLEFLYKENKAKENPLKTSLELITRYFLDHFGNTANNFT 90

Query: 86  SDSTLTKQPV---NVKTRSTTTQTKVVQFLQITTEDS 119
            D+ +    V   N K  S  ++T +V    ++ ED+
Sbjct: 91  QDTPIPALSVPKKNNKVPSRCSETTLVNIYDLSDEDA 127


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.309    0.122    0.333 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,393,800
Number of Sequences: 37866
Number of extensions: 150016
Number of successful extensions: 643
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 41
Number of HSP's that attempted gapping in prelim test: 590
Number of HSP's gapped (non-prelim): 91
length of query: 127
length of database: 18,247,518
effective HSP length: 90
effective length of query: 37
effective length of database: 14,839,578
effective search space: 549064386
effective search space used: 549064386
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.