LOC100128088 8287

Name: LOC100128088	Sequence: fasta or formatted (198aa)		NCBI GI: 169202084
Description: PREDICTED: similar to hCG2042634		Not currently referenced in the text
Other entries for this name: alt prot {358aa} PREDICTED: similar to hCG2042634 alt prot {198aa} PREDICTED: similar to hCG2042634
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.6 11 2 C cysteine 0.5 1 1 D aspartate 11.6 23 2 E glutamate 5.6 11 1 F phenylalanine 7.1 14 2 G glycine 7.1 14 2 H histidine 3.0 6 1 I isoleucine 4.5 9 2 K lysine 6.1 12 2 L leucine 5.6 11 2 M methionine 1.5 3 1 N asparagine 4.0 8 1 P proline 5.6 11 2 Q glutamine 3.5 7 1 R arginine 4.5 9 1 S serine 7.1 14 2 T threonine 4.0 8 1 V valine 6.1 12 2 W tryptophan 2.5 5 1 Y tyrosine 4.5 9 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to hCG2042634 LOC100128088 0.995 PREDICTED: similar to hCG2042634 LOC100128088 0.856 PREDICTED: similar to hCG2042634 MMP1 0.222 matrix metalloproteinase 1 isoform 2 MMP1 0.222 matrix metalloproteinase 1 isoform 1 preproprotein [H... MMP8 0.179 matrix metalloproteinase 8 preproprotein MMP3 0.179 matrix metalloproteinase 3 preproprotein MMP10 0.176 matrix metalloproteinase 10 preproprotein MMP9 0.174 matrix metalloproteinase 9 preproprotein MMP13 0.161 matrix metalloproteinase 13 preproprotein MMP2 0.151 matrix metalloproteinase 2 isoform b MMP2 0.151 matrix metalloproteinase 2 isoform a preproprotein [... MMP27 0.144 matrix metalloproteinase 27 MMP20 0.134 matrix metalloproteinase 20 preproprotein MMP24 0.134 matrix metalloproteinase 24 preproprotein MMP12 0.131 matrix metalloproteinase 12 preproprotein MMP16 0.128 matrix metalloproteinase 16 isoform 2 preproprotein... MMP16 0.128 matrix metalloproteinase 16 isoform 1 preproprotein ... MMP7 0.108 matrix metalloproteinase 7 preproprotein MMP14 0.106 matrix metalloproteinase 14 preproprotein MMP15 0.098 matrix metalloproteinase 15 preproprotein MMP11 0.093 matrix metalloproteinase 11 preproprotein MMP17 0.076 matrix metalloproteinase 17 preproprotein MMP25 0.063 matrix metalloproteinase 25 preproprotein MMP28 0.060 matrix metalloproteinase 28 isoform 1 preproprotein ... MMP26 0.058 matrix metalloproteinase 26 preproprotein MMP19 0.043 matrix metalloproteinase 19 isoform rasi-1 preproprot... MMP21 0.028 matrix metalloproteinase 21 preproprotein VTN 0.025 vitronectin precursor PRG4 0.023 proteoglycan 4 isoform D Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.