LOC100128088 8334

Name: LOC100128088	Sequence: fasta or formatted (358aa)		NCBI GI: 169203154
Description: PREDICTED: similar to hCG2042634		Not currently referenced in the text
Other entries for this name: alt prot {198aa} PREDICTED: similar to hCG2042634 alt prot {198aa} PREDICTED: similar to hCG2042634
Composition: Amino acid Percentage Count Longest homopolymer A alanine 3.9 14 2 C cysteine 0.8 3 1 D aspartate 9.2 33 2 E glutamate 5.3 19 1 F phenylalanine 5.9 21 2 G glycine 5.9 21 2 H histidine 2.0 7 1 I isoleucine 4.7 17 2 K lysine 5.6 20 2 L leucine 8.1 29 3 M methionine 2.5 9 2 N asparagine 4.2 15 2 P proline 4.7 17 2 Q glutamine 7.3 26 3 R arginine 5.0 18 1 S serine 7.8 28 2 T threonine 4.5 16 2 V valine 6.1 22 2 W tryptophan 2.0 7 1 Y tyrosine 4.5 16 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to hCG2042634 LOC100128088 0.480 PREDICTED: similar to hCG2042634 LOC100128088 0.476 PREDICTED: similar to hCG2042634 MMP1 0.161 matrix metalloproteinase 1 isoform 1 preproprotein [H... MMP3 0.123 matrix metalloproteinase 3 preproprotein MMP1 0.123 matrix metalloproteinase 1 isoform 2 MMP8 0.110 matrix metalloproteinase 8 preproprotein MMP10 0.108 matrix metalloproteinase 10 preproprotein MMP9 0.097 matrix metalloproteinase 9 preproprotein MMP13 0.092 matrix metalloproteinase 13 preproprotein MMP27 0.087 matrix metalloproteinase 27 MMP2 0.081 matrix metalloproteinase 2 isoform b MMP2 0.081 matrix metalloproteinase 2 isoform a preproprotein [... MMP20 0.078 matrix metalloproteinase 20 preproprotein MMP12 0.077 matrix metalloproteinase 12 preproprotein MMP24 0.071 matrix metalloproteinase 24 preproprotein MMP16 0.070 matrix metalloproteinase 16 isoform 2 preproprotein... MMP16 0.070 matrix metalloproteinase 16 isoform 1 preproprotein ... MMP14 0.059 matrix metalloproteinase 14 preproprotein MMP7 0.057 matrix metalloproteinase 7 preproprotein MMP15 0.055 matrix metalloproteinase 15 preproprotein MMP11 0.053 matrix metalloproteinase 11 preproprotein MMP17 0.042 matrix metalloproteinase 17 preproprotein MMP28 0.038 matrix metalloproteinase 28 isoform 1 preproprotein ... MMP26 0.035 matrix metalloproteinase 26 preproprotein MMP25 0.035 matrix metalloproteinase 25 preproprotein MMP19 0.027 matrix metalloproteinase 19 isoform rasi-1 preproprot... MMP21 0.014 matrix metalloproteinase 21 preproprotein VTN 0.014 vitronectin precursor PRG4 0.013 proteoglycan 4 isoform D Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.