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Search of human proteins with 169178377
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169178377 PREDICTED: hypothetical protein [Homo sapiens]
(103 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169178377 PREDICTED: hypothetical protein [Homo sapiens] 209 5e-55
gi|169179404 PREDICTED: hypothetical protein [Homo sapiens] 209 5e-55
gi|169181288 PREDICTED: hypothetical protein [Homo sapiens] 207 2e-54
gi|239754297 PREDICTED: hypothetical protein [Homo sapiens] 34 0.022
gi|239748836 PREDICTED: hypothetical protein XP_002346833 [Homo ... 34 0.022
gi|239742863 PREDICTED: hypothetical protein XP_002342665 [Homo ... 34 0.022
gi|30089935 transmembrane protein 132A isoform a [Homo sapiens] 33 0.037
gi|30089937 transmembrane protein 132A isoform b [Homo sapiens] 33 0.037
gi|5174449 H1 histone family, member X [Homo sapiens] 33 0.063
gi|156071470 hyperpolarization activated cyclic nucleotide-gated... 32 0.14
gi|197333879 genetic suppressor element 1 isoform 2 [Homo sapiens] 32 0.14
gi|44955926 genetic suppressor element 1 isoform 1 [Homo sapiens] 32 0.14
gi|239751791 PREDICTED: hypothetical protein [Homo sapiens] 31 0.18
gi|239746282 PREDICTED: hypothetical protein XP_002343723 [Homo ... 31 0.18
gi|41152076 steroid-sensitive protein 1 [Homo sapiens] 31 0.18
gi|41152074 steroid-sensitive protein 1 [Homo sapiens] 31 0.18
gi|169169586 PREDICTED: hypothetical protein [Homo sapiens] 30 0.31
gi|237757326 synaptojanin 1 isoform d [Homo sapiens] 30 0.31
gi|21359935 Down syndrome cell adhesion molecule like 1 [Homo sa... 30 0.31
gi|169213985 PREDICTED: similar to hCG2036794 [Homo sapiens] 30 0.41
gi|187936955 HHIP-like protein 1 isoform a [Homo sapiens] 30 0.53
gi|40556370 PHD finger protein 15 [Homo sapiens] 30 0.53
gi|239751846 PREDICTED: similar to hCG2036794 [Homo sapiens] 29 0.70
gi|239751471 PREDICTED: hypothetical protein XP_002347846 [Homo ... 29 0.70
gi|239746337 PREDICTED: similar to hCG2036794 [Homo sapiens] 29 0.70
gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 29 0.70
gi|4504713 insulinoma-associated 1 [Homo sapiens] 29 0.70
gi|4506141 HtrA serine peptidase 1 precursor [Homo sapiens] 29 0.91
gi|7706117 solute carrier family 15, member 3 [Homo sapiens] 29 0.91
gi|38348336 inter-alpha (globulin) inhibitor H5-like [Homo sapiens] 28 1.2
>gi|169178377 PREDICTED: hypothetical protein [Homo sapiens]
Length = 103
Score = 209 bits (531), Expect = 5e-55
Identities = 103/103 (100%), Positives = 103/103 (100%)
Query: 1 MAFWLQRWLAAAASPAPNARVRPARSARMAGERPSGGRPARLLKEPRRGIQRGHRAAGAA 60
MAFWLQRWLAAAASPAPNARVRPARSARMAGERPSGGRPARLLKEPRRGIQRGHRAAGAA
Sbjct: 1 MAFWLQRWLAAAASPAPNARVRPARSARMAGERPSGGRPARLLKEPRRGIQRGHRAAGAA 60
Query: 61 DDSVTSLPLTNTAKGLGLGTQKGAAEPNRVSPASFLCAFKTPV 103
DDSVTSLPLTNTAKGLGLGTQKGAAEPNRVSPASFLCAFKTPV
Sbjct: 61 DDSVTSLPLTNTAKGLGLGTQKGAAEPNRVSPASFLCAFKTPV 103
>gi|169179404 PREDICTED: hypothetical protein [Homo sapiens]
Length = 103
Score = 209 bits (531), Expect = 5e-55
Identities = 103/103 (100%), Positives = 103/103 (100%)
Query: 1 MAFWLQRWLAAAASPAPNARVRPARSARMAGERPSGGRPARLLKEPRRGIQRGHRAAGAA 60
MAFWLQRWLAAAASPAPNARVRPARSARMAGERPSGGRPARLLKEPRRGIQRGHRAAGAA
Sbjct: 1 MAFWLQRWLAAAASPAPNARVRPARSARMAGERPSGGRPARLLKEPRRGIQRGHRAAGAA 60
Query: 61 DDSVTSLPLTNTAKGLGLGTQKGAAEPNRVSPASFLCAFKTPV 103
DDSVTSLPLTNTAKGLGLGTQKGAAEPNRVSPASFLCAFKTPV
Sbjct: 61 DDSVTSLPLTNTAKGLGLGTQKGAAEPNRVSPASFLCAFKTPV 103
>gi|169181288 PREDICTED: hypothetical protein [Homo sapiens]
Length = 103
Score = 207 bits (526), Expect = 2e-54
Identities = 102/103 (99%), Positives = 103/103 (100%)
Query: 1 MAFWLQRWLAAAASPAPNARVRPARSARMAGERPSGGRPARLLKEPRRGIQRGHRAAGAA 60
MAFWLQRWLAAAASPAP+ARVRPARSARMAGERPSGGRPARLLKEPRRGIQRGHRAAGAA
Sbjct: 1 MAFWLQRWLAAAASPAPDARVRPARSARMAGERPSGGRPARLLKEPRRGIQRGHRAAGAA 60
Query: 61 DDSVTSLPLTNTAKGLGLGTQKGAAEPNRVSPASFLCAFKTPV 103
DDSVTSLPLTNTAKGLGLGTQKGAAEPNRVSPASFLCAFKTPV
Sbjct: 61 DDSVTSLPLTNTAKGLGLGTQKGAAEPNRVSPASFLCAFKTPV 103
>gi|239754297 PREDICTED: hypothetical protein [Homo sapiens]
Length = 175
Score = 34.3 bits (77), Expect = 0.022
Identities = 27/82 (32%), Positives = 35/82 (42%), Gaps = 8/82 (9%)
Query: 6 QRWLAAAASPAPNARVRPARSARMAGERPSGGRPARL-LKEPRRGIQRGHRAAGAADDSV 64
+RW A PA + PA +AR AG P GRP R ++P RA G
Sbjct: 71 RRWPCGA--PACTRTLSPALAARPAGRGPCAGRPRRCGCRDP-----ADSRARGCCQPQR 123
Query: 65 TSLPLTNTAKGLGLGTQKGAAE 86
+PL L GT+ GA +
Sbjct: 124 LDVPLRLGQAPLRAGTRSGAQD 145
>gi|239748836 PREDICTED: hypothetical protein XP_002346833 [Homo
sapiens]
Length = 175
Score = 34.3 bits (77), Expect = 0.022
Identities = 27/82 (32%), Positives = 35/82 (42%), Gaps = 8/82 (9%)
Query: 6 QRWLAAAASPAPNARVRPARSARMAGERPSGGRPARL-LKEPRRGIQRGHRAAGAADDSV 64
+RW A PA + PA +AR AG P GRP R ++P RA G
Sbjct: 71 RRWPCGA--PACTRTLSPALAARPAGRGPCAGRPRRCGCRDP-----ADSRARGCCQPQR 123
Query: 65 TSLPLTNTAKGLGLGTQKGAAE 86
+PL L GT+ GA +
Sbjct: 124 LDVPLRLGQAPLRAGTRSGAQD 145
>gi|239742863 PREDICTED: hypothetical protein XP_002342665 [Homo
sapiens]
Length = 175
Score = 34.3 bits (77), Expect = 0.022
Identities = 27/82 (32%), Positives = 35/82 (42%), Gaps = 8/82 (9%)
Query: 6 QRWLAAAASPAPNARVRPARSARMAGERPSGGRPARL-LKEPRRGIQRGHRAAGAADDSV 64
+RW A PA + PA +AR AG P GRP R ++P RA G
Sbjct: 71 RRWPCGA--PACTRTLSPALAARPAGRGPCAGRPRRCGCRDP-----ADSRARGCCQPQR 123
Query: 65 TSLPLTNTAKGLGLGTQKGAAE 86
+PL L GT+ GA +
Sbjct: 124 LDVPLRLGQAPLRAGTRSGAQD 145
>gi|30089935 transmembrane protein 132A isoform a [Homo sapiens]
Length = 1024
Score = 33.5 bits (75), Expect = 0.037
Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 5/81 (6%)
Query: 16 APNARVRPARSARMAGERPSGGRPARL----LKEPRRGIQRGHRAAGAADDSVTSLPL-T 70
AP+ARV +R A + G R GR + ++ P G +A DD V+ L L
Sbjct: 583 APHARVLDSRVASLEGGRVVVGREPGVTSIEVRSPLSDSILGEQALAVTDDKVSVLELRV 642
Query: 71 NTAKGLGLGTQKGAAEPNRVS 91
G+ L +G A P V+
Sbjct: 643 QPVMGISLTLSRGTAHPGEVT 663
>gi|30089937 transmembrane protein 132A isoform b [Homo sapiens]
Length = 1023
Score = 33.5 bits (75), Expect = 0.037
Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 5/81 (6%)
Query: 16 APNARVRPARSARMAGERPSGGRPARL----LKEPRRGIQRGHRAAGAADDSVTSLPL-T 70
AP+ARV +R A + G R GR + ++ P G +A DD V+ L L
Sbjct: 582 APHARVLDSRVASLEGGRVVVGREPGVTSIEVRSPLSDSILGEQALAVTDDKVSVLELRV 641
Query: 71 NTAKGLGLGTQKGAAEPNRVS 91
G+ L +G A P V+
Sbjct: 642 QPVMGISLTLSRGTAHPGEVT 662
>gi|5174449 H1 histone family, member X [Homo sapiens]
Length = 213
Score = 32.7 bits (73), Expect = 0.063
Identities = 27/79 (34%), Positives = 37/79 (46%), Gaps = 6/79 (7%)
Query: 10 AAAASPAPNARVRPARSARMAGERPSGGRPARLLKEPRRGIQRGHRAAGAADDSVTSLPL 69
AAA +PAP A + AG R + +PAR K +R ++G AGA D
Sbjct: 132 AAATAPAPTAHKAKKAAPGAAGSRRADKKPARGQKPEQRSHKKG---AGAKKDKGGKAKK 188
Query: 70 TNTAKGLGLGTQKGAAEPN 88
T A G + K AA+P+
Sbjct: 189 TAAAGGKKV---KKAAKPS 204
>gi|156071470 hyperpolarization activated cyclic nucleotide-gated
potassium channel 2 [Homo sapiens]
Length = 889
Score = 31.6 bits (70), Expect = 0.14
Identities = 28/85 (32%), Positives = 35/85 (41%), Gaps = 5/85 (5%)
Query: 11 AAASPAPNARVRPA---RSARMAGERPSGGRPARLLKEPRRGIQRGHRAAGAADDSVTSL 67
AAASP P P S R P GG PA L P +R RA+ S SL
Sbjct: 768 AAASPGPPPPASPPGAPASPRAPRTSPYGGLPAAPLAGPALPARRLSRASRPLSASQPSL 827
Query: 68 PLTNTAKGLGLGTQKGAAEPNRVSP 92
P + A G T+ ++ R+ P
Sbjct: 828 P--HGAPGPAASTRPASSSTPRLGP 850
>gi|197333879 genetic suppressor element 1 isoform 2 [Homo sapiens]
Length = 1113
Score = 31.6 bits (70), Expect = 0.14
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 12 AASPAPNARVRPARSARMAGERPSGGRPARLLKEP--RRGIQRGHRAAGAADDSVTSLPL 69
AA P +VRP +R+ P+ G ARL + P ++ + H GAA + +PL
Sbjct: 842 AAEPGKLEQVRPQELSRVQELAPASGEKARLSEAPGGKKSLSMLHYIRGAAPKDI-PVPL 900
Query: 70 TNTAKG 75
+++ G
Sbjct: 901 SHSTNG 906
>gi|44955926 genetic suppressor element 1 isoform 1 [Homo sapiens]
Length = 1217
Score = 31.6 bits (70), Expect = 0.14
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 12 AASPAPNARVRPARSARMAGERPSGGRPARLLKEP--RRGIQRGHRAAGAADDSVTSLPL 69
AA P +VRP +R+ P+ G ARL + P ++ + H GAA + +PL
Sbjct: 946 AAEPGKLEQVRPQELSRVQELAPASGEKARLSEAPGGKKSLSMLHYIRGAAPKDI-PVPL 1004
Query: 70 TNTAKG 75
+++ G
Sbjct: 1005 SHSTNG 1010
>gi|239751791 PREDICTED: hypothetical protein [Homo sapiens]
Length = 650
Score = 31.2 bits (69), Expect = 0.18
Identities = 24/58 (41%), Positives = 26/58 (44%), Gaps = 4/58 (6%)
Query: 11 AAASPAPNARVRPARSARMAGERPSGGRPARLLKEPRRGIQRGHRAAGAADDSVTSLP 68
A P P + RP R G RP G RPAR K P QR + AA S TS P
Sbjct: 196 ARPRPGPTSSRRPW--GRAGGLRPRGKRPARGKKRP--SSQRRCSSPSAARASATSAP 249
>gi|239746282 PREDICTED: hypothetical protein XP_002343723 [Homo
sapiens]
Length = 725
Score = 31.2 bits (69), Expect = 0.18
Identities = 24/58 (41%), Positives = 26/58 (44%), Gaps = 4/58 (6%)
Query: 11 AAASPAPNARVRPARSARMAGERPSGGRPARLLKEPRRGIQRGHRAAGAADDSVTSLP 68
A P P + RP R G RP G RPAR K P QR + AA S TS P
Sbjct: 196 ARPRPGPTSSRRPW--GRAGGLRPRGKRPARGKKRP--SSQRRCSSPSAARASATSAP 249
>gi|41152076 steroid-sensitive protein 1 [Homo sapiens]
Length = 950
Score = 31.2 bits (69), Expect = 0.18
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Query: 5 LQRWLAAAASPAPNARVRPARSARMAG-ERPSGGRPARLLKEP--RRGIQR 52
L WL + P P+A +R + R P RPAR L+ RGI+R
Sbjct: 13 LAMWLVCGSEPHPHATIRGSHGGRKVPLVSPDSSRPARFLRHTGRSRGIER 63
>gi|41152074 steroid-sensitive protein 1 [Homo sapiens]
Length = 950
Score = 31.2 bits (69), Expect = 0.18
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Query: 5 LQRWLAAAASPAPNARVRPARSARMAG-ERPSGGRPARLLKEP--RRGIQR 52
L WL + P P+A +R + R P RPAR L+ RGI+R
Sbjct: 13 LAMWLVCGSEPHPHATIRGSHGGRKVPLVSPDSSRPARFLRHTGRSRGIER 63
>gi|169169586 PREDICTED: hypothetical protein [Homo sapiens]
Length = 251
Score = 30.4 bits (67), Expect = 0.31
Identities = 34/111 (30%), Positives = 39/111 (35%), Gaps = 23/111 (20%)
Query: 10 AAAASPAPNARVRPARSARMAGERPSGGRPAR--------------LLKEPRR--GIQRG 53
AA A P+P A PAR A + GE P+ GR R L P R G+ RG
Sbjct: 59 AAGAVPSPPAAAHPARPA-LRGETPAPGRRGRATTRGEVQPSVRPPLSHRPLRGGGMGRG 117
Query: 54 HRAAGAADDSVTSLP------LTNTAKGLGLGTQKGAAEPNRVSPASFLCA 98
G + LP L G G A R SP F A
Sbjct: 118 RPGKGPPPNPSRRLPPAPPGGRRTWLSALATGPAAGGAGRRRRSPPVFRAA 168
>gi|237757326 synaptojanin 1 isoform d [Homo sapiens]
Length = 1526
Score = 30.4 bits (67), Expect = 0.31
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Query: 15 PAPNARVRPARSARMAGERPSGGRPARLLKEPRRGI---QRGHRAAGAADDSVTSLPLTN 71
P P+ R +P+ A +AG P+G AR PR G+ + H A A + S T+
Sbjct: 1122 PPPSGRSQPSPQAGLAGPGPAGYSTARPTIPPRAGVISAPQSHARASAGRLTPESQSKTS 1181
Query: 72 -TAKG 75
T+KG
Sbjct: 1182 ETSKG 1186
>gi|21359935 Down syndrome cell adhesion molecule like 1 [Homo
sapiens]
Length = 2113
Score = 30.4 bits (67), Expect = 0.31
Identities = 25/79 (31%), Positives = 33/79 (41%), Gaps = 6/79 (7%)
Query: 6 QRWLAAAASPAPNARVRPARSARMAGERPSGGRPARLLKEPRRGIQRGHRAAGAADDSVT 65
QR LA A PA A P + PS PA + PR G H G + DS+
Sbjct: 2031 QRTLAMPAPPAGTAPPAPGPTPAEPPTAPSAAPPAPSTEPPRAG--GPHTKMGGSRDSL- 2087
Query: 66 SLPLTNTAKGLGLGTQKGA 84
L + G+G ++GA
Sbjct: 2088 ---LEMSTSGVGRSQKQGA 2103
>gi|169213985 PREDICTED: similar to hCG2036794 [Homo sapiens]
Length = 518
Score = 30.0 bits (66), Expect = 0.41
Identities = 25/80 (31%), Positives = 34/80 (42%), Gaps = 8/80 (10%)
Query: 9 LAAAASPAPNARVRPARSARMAGERPSGGRPARLLKEPRRGIQRGHRAAGAADDSVTSLP 68
L A + P P SAR+AG GRP++L R QR R G V ++
Sbjct: 332 LKAPQNSGPKESNAPPPSARIAGPPALPGRPSQLATATLRAPQRHSRGEG-----VNTII 386
Query: 69 LTNTAKGLG---LGTQKGAA 85
+ K G +G +GAA
Sbjct: 387 VVERVKETGVTLVGRPRGAA 406
>gi|187936955 HHIP-like protein 1 isoform a [Homo sapiens]
Length = 782
Score = 29.6 bits (65), Expect = 0.53
Identities = 22/62 (35%), Positives = 26/62 (41%), Gaps = 6/62 (9%)
Query: 6 QRWLAAAASPAPNARVRPARSARMAGERPSGGRPARLLKEPRRGIQRGH----RAAGAAD 61
+R AA PAP R PAR + G R GGR L R + G R AG +
Sbjct: 626 RRGRPTAAPPAPTPR--PARPTQQPGSRRGGGRRRGRLNSASRAFRDGEVRLVRPAGLSS 683
Query: 62 DS 63
S
Sbjct: 684 GS 685
>gi|40556370 PHD finger protein 15 [Homo sapiens]
Length = 790
Score = 29.6 bits (65), Expect = 0.53
Identities = 24/81 (29%), Positives = 33/81 (40%), Gaps = 9/81 (11%)
Query: 12 AASPAPNARVRPARSA----RMAGERPSGGR--PARLLKEPRRGIQRGHRAAGAADDSVT 65
AASP P R+RP R + R+ G RP G P+ + + P+ + G D
Sbjct: 699 AASPKPLGRLRPPRESKVTRRLPGARPDAGMGPPSAVAERPKVSLHFDTETDGYFSDGEM 758
Query: 66 SLPLTNTAKGLGLGTQKGAAE 86
S G G Q+G E
Sbjct: 759 SDSDVEAEDG---GVQRGPRE 776
>gi|239751846 PREDICTED: similar to hCG2036794 [Homo sapiens]
Length = 518
Score = 29.3 bits (64), Expect = 0.70
Identities = 25/80 (31%), Positives = 34/80 (42%), Gaps = 8/80 (10%)
Query: 9 LAAAASPAPNARVRPARSARMAGERPSGGRPARLLKEPRRGIQRGHRAAGAADDSVTSLP 68
L A + P P SAR+AG GRP++L R QR R G V ++
Sbjct: 332 LKAPQNSGPKESNVPPPSARIAGPPALPGRPSQLAPATLRAPQRHSRGEG-----VNTII 386
Query: 69 LTNTAKGLG---LGTQKGAA 85
+ K G +G +GAA
Sbjct: 387 VVERVKETGVTLVGRPRGAA 406
>gi|239751471 PREDICTED: hypothetical protein XP_002347846 [Homo
sapiens]
Length = 870
Score = 29.3 bits (64), Expect = 0.70
Identities = 23/80 (28%), Positives = 32/80 (40%), Gaps = 15/80 (18%)
Query: 8 WLAAAASPAPNARVRPARSARMAGERPSGGRPARLLKEPRRGIQRGHRAAGAADDSVTSL 67
W A A P+ R RP R A +G R + + P R ++RG G
Sbjct: 458 WKARGAVPSGRLRGRPGRVAGASGRRGASQARGGTGRAPAR-LRRGRGMPGRV------- 509
Query: 68 PLTNTAKGLGLGTQKGAAEP 87
G G+G +GA+EP
Sbjct: 510 -------GNGVGEGRGASEP 522
>gi|239746337 PREDICTED: similar to hCG2036794 [Homo sapiens]
Length = 518
Score = 29.3 bits (64), Expect = 0.70
Identities = 25/80 (31%), Positives = 34/80 (42%), Gaps = 8/80 (10%)
Query: 9 LAAAASPAPNARVRPARSARMAGERPSGGRPARLLKEPRRGIQRGHRAAGAADDSVTSLP 68
L A + P P SAR+AG GRP++L R QR R G V ++
Sbjct: 332 LKAPQNSGPKESNVPPPSARIAGPPALPGRPSQLAPATLRAPQRHSRGEG-----VNTII 386
Query: 69 LTNTAKGLG---LGTQKGAA 85
+ K G +G +GAA
Sbjct: 387 VVERVKETGVTLVGRPRGAA 406
>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
Length = 653
Score = 29.3 bits (64), Expect = 0.70
Identities = 28/93 (30%), Positives = 38/93 (40%), Gaps = 15/93 (16%)
Query: 10 AAAASPAPNARVRPARSARMA------GERPSGGRPARLLKEPRR---------GIQRGH 54
AAAA+P P AR + + S R A G R +GG R + RR +RG
Sbjct: 349 AAAAAPTPPARGKESPSPRSAPSSQGRGGRAAGGAGRRRRRRRRRRRSRSSASAPRRRGR 408
Query: 55 RAAGAADDSVTSLPLTNTAKGLGLGTQKGAAEP 87
R A +S L+ G+ +GA P
Sbjct: 409 RRPRPAPPRGSSRSLSRARSSSDSGSGRGAPGP 441
>gi|4504713 insulinoma-associated 1 [Homo sapiens]
Length = 510
Score = 29.3 bits (64), Expect = 0.70
Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 19/87 (21%)
Query: 11 AAASPAPNARVRPARSARMAGERP----SGGRPARLLKEP----RRGIQRGHRAAGAADD 62
AA P P + PA + R G+RP + PA+ +K P + I++ H +D
Sbjct: 179 AARGPGPGPPLPPAAALRPPGKRPPPPTAAEPPAKAVKAPGAKKPKAIRKLH-----FED 233
Query: 63 SVTSLPLTNTAKGLGLGTQKGAAEPNR 89
VT+ P+ LGL ++G E R
Sbjct: 234 EVTTSPV------LGLKIKEGPVEAPR 254
>gi|4506141 HtrA serine peptidase 1 precursor [Homo sapiens]
Length = 480
Score = 28.9 bits (63), Expect = 0.91
Identities = 22/75 (29%), Positives = 29/75 (38%), Gaps = 6/75 (8%)
Query: 9 LAAAASPAPNARVRPARSARMAGERPSGGRPARLLKEPRRGIQRGHRAAGAADDSVTSLP 68
L A+PA R RSA +A P PAR +P H G A D+
Sbjct: 13 LLLLAAPASAQLSRAGRSAPLAAGCPDRCEPARCPPQPE------HCEGGRARDACGCCE 66
Query: 69 LTNTAKGLGLGTQKG 83
+ +G G Q+G
Sbjct: 67 VCGAPEGAACGLQEG 81
>gi|7706117 solute carrier family 15, member 3 [Homo sapiens]
Length = 581
Score = 28.9 bits (63), Expect = 0.91
Identities = 21/46 (45%), Positives = 24/46 (52%), Gaps = 10/46 (21%)
Query: 15 PAPNARVRPARSARMAGERPSGGRPARLLKEPRRGIQRGHRAAGAA 60
PAP AR +P R+ GER LL RG +R RAAGAA
Sbjct: 2 PAPRAREQP----RVPGERQP------LLPRGARGPRRWRRAAGAA 37
>gi|38348336 inter-alpha (globulin) inhibitor H5-like [Homo sapiens]
Length = 1313
Score = 28.5 bits (62), Expect = 1.2
Identities = 13/53 (24%), Positives = 27/53 (50%)
Query: 42 LLKEPRRGIQRGHRAAGAADDSVTSLPLTNTAKGLGLGTQKGAAEPNRVSPAS 94
++ +P++ + R + T +P +++ GLG+ T + A P +SP S
Sbjct: 609 VMVQPKQASEETRRQTSTSAGPDTIMPSSSSRHGLGVSTAQPALVPKVISPKS 661
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.130 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,406,239
Number of Sequences: 37866
Number of extensions: 200317
Number of successful extensions: 1208
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 71
Number of HSP's that attempted gapping in prelim test: 1148
Number of HSP's gapped (non-prelim): 131
length of query: 103
length of database: 18,247,518
effective HSP length: 74
effective length of query: 29
effective length of database: 15,445,434
effective search space: 447917586
effective search space used: 447917586
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.