Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 169177315
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169177315 PREDICTED: similar to Protein FAM27D1 [Homo
sapiens]
(126 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169177315 PREDICTED: similar to Protein FAM27D1 [Homo sapiens] 268 1e-72
gi|169184225 PREDICTED: similar to Protein FAM27D1 [Homo sapiens] 260 2e-70
gi|239743788 PREDICTED: hypothetical protein XP_002342958 [Homo ... 224 2e-59
gi|239752497 PREDICTED: similar to family with sequence similari... 222 7e-59
gi|239743790 PREDICTED: hypothetical protein XP_002342959 [Homo ... 221 1e-58
gi|239749581 PREDICTED: hypothetical protein XP_002347092 [Homo ... 216 5e-57
gi|239757459 PREDICTED: similar to Protein FAM27D1 [Homo sapiens] 200 2e-52
gi|239750316 PREDICTED: hypothetical protein XP_002347358 [Homo ... 200 2e-52
gi|239746462 PREDICTED: hypothetical protein XP_002344254 [Homo ... 200 2e-52
gi|239755774 PREDICTED: similar to Protein FAM27E2 [Homo sapiens] 200 3e-52
gi|239750275 PREDICTED: similar to Protein FAM27E2 [Homo sapiens] 200 3e-52
gi|239744585 PREDICTED: similar to Protein FAM27E2 [Homo sapiens] 200 3e-52
gi|239754574 PREDICTED: similar to Protein FAM27D1 [Homo sapiens] 199 5e-52
gi|239749126 PREDICTED: hypothetical protein XP_002346920 [Homo ... 199 5e-52
gi|239743178 PREDICTED: hypothetical protein XP_002342769 [Homo ... 199 5e-52
gi|239508842 PREDICTED: similar to Protein FAM27D1 [Homo sapiens] 199 5e-52
gi|169184221 PREDICTED: family with sequence similarity 27, memb... 190 3e-49
gi|169177259 PREDICTED: similar to Protein FAM27E2 [Homo sapiens] 187 2e-48
gi|239758105 PREDICTED: similar to Protein FAM27D1 [Homo sapiens] 181 1e-46
gi|239743781 PREDICTED: hypothetical protein XP_002344297 [Homo ... 55 1e-08
gi|169209818 PREDICTED: hypothetical protein [Homo sapiens] 40 4e-04
gi|239747174 PREDICTED: hypothetical protein XP_002343931, parti... 38 0.002
gi|153945755 zinc finger protein 608 [Homo sapiens] 37 0.004
gi|169171485 PREDICTED: hypothetical protein [Homo sapiens] 35 0.015
gi|49574498 hypothetical protein LOC118461 isoform 2 [Homo sapiens] 34 0.026
gi|169167062 PREDICTED: hypothetical protein LOC285556 [Homo sap... 34 0.034
gi|113416182 PREDICTED: hypothetical protein LOC285556 [Homo sap... 34 0.034
gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo ... 34 0.034
gi|113415686 PREDICTED: hypothetical protein LOC285556 [Homo sap... 34 0.034
gi|239747891 PREDICTED: hypothetical protein [Homo sapiens] 33 0.075
>gi|169177315 PREDICTED: similar to Protein FAM27D1 [Homo sapiens]
Length = 126
Score = 268 bits (684), Expect = 1e-72
Identities = 126/126 (100%), Positives = 126/126 (100%)
Query: 1 MGMRFQLLRERRISSRGPGFQAPKADPPRRKRLTAGLMTQVETQKEAHQRQAAMRQTALW 60
MGMRFQLLRERRISSRGPGFQAPKADPPRRKRLTAGLMTQVETQKEAHQRQAAMRQTALW
Sbjct: 1 MGMRFQLLRERRISSRGPGFQAPKADPPRRKRLTAGLMTQVETQKEAHQRQAAMRQTALW 60
Query: 61 RTGHIRPKTHTHTGIHTQTHRERERNTQRLRDRERRENGRHTHTHTHTHTQRHTAEALKH 120
RTGHIRPKTHTHTGIHTQTHRERERNTQRLRDRERRENGRHTHTHTHTHTQRHTAEALKH
Sbjct: 61 RTGHIRPKTHTHTGIHTQTHRERERNTQRLRDRERRENGRHTHTHTHTHTQRHTAEALKH 120
Query: 121 TPPGNP 126
TPPGNP
Sbjct: 121 TPPGNP 126
>gi|169184225 PREDICTED: similar to Protein FAM27D1 [Homo sapiens]
Length = 126
Score = 260 bits (664), Expect = 2e-70
Identities = 123/126 (97%), Positives = 123/126 (97%)
Query: 1 MGMRFQLLRERRISSRGPGFQAPKADPPRRKRLTAGLMTQVETQKEAHQRQAAMRQTALW 60
MGMRFQLLRERRISSRGPGFQAPKADPPRRKRLTAGLMTQVETQKEAHQRQAAMRQTALW
Sbjct: 1 MGMRFQLLRERRISSRGPGFQAPKADPPRRKRLTAGLMTQVETQKEAHQRQAAMRQTALW 60
Query: 61 RTGHIRPKTHTHTGIHTQTHRERERNTQRLRDRERRENGRHTHTHTHTHTQRHTAEALKH 120
RTGHIRPKTHTHTGIHTQTHRERERNTQRLRDRERRE GRHTH HT THTQRHTAEALKH
Sbjct: 61 RTGHIRPKTHTHTGIHTQTHRERERNTQRLRDRERRETGRHTHRHTQTHTQRHTAEALKH 120
Query: 121 TPPGNP 126
TPPGNP
Sbjct: 121 TPPGNP 126
>gi|239743788 PREDICTED: hypothetical protein XP_002342958 [Homo
sapiens]
Length = 125
Score = 224 bits (570), Expect = 2e-59
Identities = 106/126 (84%), Positives = 113/126 (89%), Gaps = 1/126 (0%)
Query: 1 MGMRFQLLRERRISSRGPGFQAPKADPPRRKRLTAGLMTQVETQKEAHQRQAAMRQTALW 60
MGMR QLLR+RRISSRGPG KADP ++KRLT GLMTQ ETQKEA QRQAAMR+TALW
Sbjct: 1 MGMRLQLLRDRRISSRGPGLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALW 60
Query: 61 RTGHIRPKTHTHTGIHTQTHRERERNTQRLRDRERRENGRHTHTHTHTHTQRHTAEALKH 120
TGH++PKTHTHTG+HTQTHRERERNTQRLRDRERRENGRHTH HT THTQRHT EALKH
Sbjct: 61 HTGHLQPKTHTHTGMHTQTHRERERNTQRLRDRERRENGRHTHRHT-THTQRHTEEALKH 119
Query: 121 TPPGNP 126
TPPGNP
Sbjct: 120 TPPGNP 125
>gi|239752497 PREDICTED: similar to family with sequence similarity
27, member D1, partial [Homo sapiens]
Length = 122
Score = 222 bits (565), Expect = 7e-59
Identities = 109/122 (89%), Positives = 111/122 (90%), Gaps = 2/122 (1%)
Query: 1 MGMRFQLLRERRISSRGPGFQAPKADPPRRKRLTAGLMTQVETQKEAHQRQAAMRQTALW 60
MGMRFQLLRE+RISSRGPGF PKAD PRRKRLTAGLMTQ E +KEAHQRQAAMRQTALW
Sbjct: 1 MGMRFQLLREQRISSRGPGFHTPKADLPRRKRLTAGLMTQAEMEKEAHQRQAAMRQTALW 60
Query: 61 RTGHIRPKTHTHTGIHTQTHRERERNTQRLRDRERRENGRHTHTHTH--THTQRHTAEAL 118
RTGHI PKTHTHTGIHTQTHRERERNTQRLRDRERRE RHTHTHTH THTQ HTAEAL
Sbjct: 61 RTGHIWPKTHTHTGIHTQTHRERERNTQRLRDRERREWERHTHTHTHTETHTQSHTAEAL 120
Query: 119 KH 120
KH
Sbjct: 121 KH 122
>gi|239743790 PREDICTED: hypothetical protein XP_002342959 [Homo
sapiens]
Length = 124
Score = 221 bits (562), Expect = 1e-58
Identities = 105/126 (83%), Positives = 112/126 (88%), Gaps = 2/126 (1%)
Query: 1 MGMRFQLLRERRISSRGPGFQAPKADPPRRKRLTAGLMTQVETQKEAHQRQAAMRQTALW 60
MGMR QLLR+RRISSRGPG KADP ++KRLT GLMTQ ETQKEA QRQAAMR+TALW
Sbjct: 1 MGMRLQLLRDRRISSRGPGLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALW 60
Query: 61 RTGHIRPKTHTHTGIHTQTHRERERNTQRLRDRERRENGRHTHTHTHTHTQRHTAEALKH 120
TGH++PKTHTHTG+HTQTHRERERNTQRLRDRERRENGR HTHT THTQRHT EALKH
Sbjct: 61 HTGHLQPKTHTHTGMHTQTHRERERNTQRLRDRERRENGR--HTHTETHTQRHTEEALKH 118
Query: 121 TPPGNP 126
TPPGNP
Sbjct: 119 TPPGNP 124
>gi|239749581 PREDICTED: hypothetical protein XP_002347092 [Homo
sapiens]
Length = 122
Score = 216 bits (549), Expect = 5e-57
Identities = 103/126 (81%), Positives = 110/126 (87%), Gaps = 4/126 (3%)
Query: 1 MGMRFQLLRERRISSRGPGFQAPKADPPRRKRLTAGLMTQVETQKEAHQRQAAMRQTALW 60
MGMR QLLR+RRISSRGPG KADP ++KRLT GLMTQ ETQKEA QRQAAMR+TALW
Sbjct: 1 MGMRLQLLRDRRISSRGPGLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALW 60
Query: 61 RTGHIRPKTHTHTGIHTQTHRERERNTQRLRDRERRENGRHTHTHTHTHTQRHTAEALKH 120
TGH++PKTHTHTG+HTQTHRERERNTQRLRDRERREN HTHT THTQRHT EALKH
Sbjct: 61 HTGHLQPKTHTHTGMHTQTHRERERNTQRLRDRERREN----HTHTETHTQRHTEEALKH 116
Query: 121 TPPGNP 126
TPPGNP
Sbjct: 117 TPPGNP 122
>gi|239757459 PREDICTED: similar to Protein FAM27D1 [Homo sapiens]
Length = 122
Score = 200 bits (509), Expect = 2e-52
Identities = 99/126 (78%), Positives = 105/126 (83%), Gaps = 4/126 (3%)
Query: 1 MGMRFQLLRERRISSRGPGFQAPKADPPRRKRLTAGLMTQVETQKEAHQRQAAMRQTALW 60
MG R QLL++RRI SRGPGF A KADP RKRLT GLMTQ ETQKE QRQAAM++TALW
Sbjct: 1 MGTRQQLLQDRRIFSRGPGFHAAKADPRGRKRLTTGLMTQAETQKEVQQRQAAMQETALW 60
Query: 61 RTGHIRPKTHTHTGIHTQTHRERERNTQRLRDRERRENGRHTHTHTHTHTQRHTAEALKH 120
TGHI+PKTH HTG HTQTHRE ERNTQRLRDRERRENGR HTHT T+ HTAEALKH
Sbjct: 61 FTGHIQPKTHKHTGTHTQTHREWERNTQRLRDRERRENGR----HTHTQTKGHTAEALKH 116
Query: 121 TPPGNP 126
TPPGNP
Sbjct: 117 TPPGNP 122
>gi|239750316 PREDICTED: hypothetical protein XP_002347358 [Homo
sapiens]
Length = 122
Score = 200 bits (509), Expect = 2e-52
Identities = 99/126 (78%), Positives = 105/126 (83%), Gaps = 4/126 (3%)
Query: 1 MGMRFQLLRERRISSRGPGFQAPKADPPRRKRLTAGLMTQVETQKEAHQRQAAMRQTALW 60
MG R QLL++RRI SRGPGF A KADP RKRLT GLMTQ ETQKE QRQAAM++TALW
Sbjct: 1 MGTRQQLLQDRRIFSRGPGFHAAKADPRGRKRLTTGLMTQAETQKEVQQRQAAMQETALW 60
Query: 61 RTGHIRPKTHTHTGIHTQTHRERERNTQRLRDRERRENGRHTHTHTHTHTQRHTAEALKH 120
TGHI+PKTH HTG HTQTHRE ERNTQRLRDRERRENGR HTHT T+ HTAEALKH
Sbjct: 61 FTGHIQPKTHKHTGTHTQTHREWERNTQRLRDRERRENGR----HTHTQTKGHTAEALKH 116
Query: 121 TPPGNP 126
TPPGNP
Sbjct: 117 TPPGNP 122
>gi|239746462 PREDICTED: hypothetical protein XP_002344254 [Homo
sapiens]
Length = 122
Score = 200 bits (509), Expect = 2e-52
Identities = 99/126 (78%), Positives = 105/126 (83%), Gaps = 4/126 (3%)
Query: 1 MGMRFQLLRERRISSRGPGFQAPKADPPRRKRLTAGLMTQVETQKEAHQRQAAMRQTALW 60
MG R QLL++RRI SRGPGF A KADP RKRLT GLMTQ ETQKE QRQAAM++TALW
Sbjct: 1 MGTRQQLLQDRRIFSRGPGFHAAKADPRGRKRLTTGLMTQAETQKEVQQRQAAMQETALW 60
Query: 61 RTGHIRPKTHTHTGIHTQTHRERERNTQRLRDRERRENGRHTHTHTHTHTQRHTAEALKH 120
TGHI+PKTH HTG HTQTHRE ERNTQRLRDRERRENGR HTHT T+ HTAEALKH
Sbjct: 61 FTGHIQPKTHKHTGTHTQTHREWERNTQRLRDRERRENGR----HTHTQTKGHTAEALKH 116
Query: 121 TPPGNP 126
TPPGNP
Sbjct: 117 TPPGNP 122
>gi|239755774 PREDICTED: similar to Protein FAM27E2 [Homo sapiens]
Length = 126
Score = 200 bits (508), Expect = 3e-52
Identities = 97/126 (76%), Positives = 104/126 (82%)
Query: 1 MGMRFQLLRERRISSRGPGFQAPKADPPRRKRLTAGLMTQVETQKEAHQRQAAMRQTALW 60
MGM QLLR+RR+SSRGPG PK +P +RK LTAG TQ ETQK AHQRQAAMR+ AL
Sbjct: 1 MGMIVQLLRDRRVSSRGPGLHKPKVEPRQRKPLTAGHRTQAETQKGAHQRQAAMREIALC 60
Query: 61 RTGHIRPKTHTHTGIHTQTHRERERNTQRLRDRERRENGRHTHTHTHTHTQRHTAEALKH 120
TGHIRPKTH HTG HTQT RERERNTQRLRDRERRENGRHT T+T+THTQ HTA A KH
Sbjct: 61 CTGHIRPKTHLHTGTHTQTDRERERNTQRLRDRERRENGRHTQTYTYTHTQSHTAVAQKH 120
Query: 121 TPPGNP 126
TPPGNP
Sbjct: 121 TPPGNP 126
>gi|239750275 PREDICTED: similar to Protein FAM27E2 [Homo sapiens]
Length = 126
Score = 200 bits (508), Expect = 3e-52
Identities = 97/126 (76%), Positives = 104/126 (82%)
Query: 1 MGMRFQLLRERRISSRGPGFQAPKADPPRRKRLTAGLMTQVETQKEAHQRQAAMRQTALW 60
MGM QLLR+RR+SSRGPG PK +P +RK LTAG TQ ETQK AHQRQAAMR+ AL
Sbjct: 1 MGMIVQLLRDRRVSSRGPGLHKPKVEPRQRKPLTAGHRTQAETQKGAHQRQAAMREIALC 60
Query: 61 RTGHIRPKTHTHTGIHTQTHRERERNTQRLRDRERRENGRHTHTHTHTHTQRHTAEALKH 120
TGHIRPKTH HTG HTQT RERERNTQRLRDRERRENGRHT T+T+THTQ HTA A KH
Sbjct: 61 CTGHIRPKTHLHTGTHTQTDRERERNTQRLRDRERRENGRHTQTYTYTHTQSHTAVAQKH 120
Query: 121 TPPGNP 126
TPPGNP
Sbjct: 121 TPPGNP 126
>gi|239744585 PREDICTED: similar to Protein FAM27E2 [Homo sapiens]
Length = 126
Score = 200 bits (508), Expect = 3e-52
Identities = 97/126 (76%), Positives = 104/126 (82%)
Query: 1 MGMRFQLLRERRISSRGPGFQAPKADPPRRKRLTAGLMTQVETQKEAHQRQAAMRQTALW 60
MGM QLLR+RR+SSRGPG PK +P +RK LTAG TQ ETQK AHQRQAAMR+ AL
Sbjct: 1 MGMIVQLLRDRRVSSRGPGLHKPKVEPRQRKPLTAGHRTQAETQKGAHQRQAAMREIALC 60
Query: 61 RTGHIRPKTHTHTGIHTQTHRERERNTQRLRDRERRENGRHTHTHTHTHTQRHTAEALKH 120
TGHIRPKTH HTG HTQT RERERNTQRLRDRERRENGRHT T+T+THTQ HTA A KH
Sbjct: 61 CTGHIRPKTHLHTGTHTQTDRERERNTQRLRDRERRENGRHTQTYTYTHTQSHTAVAQKH 120
Query: 121 TPPGNP 126
TPPGNP
Sbjct: 121 TPPGNP 126
>gi|239754574 PREDICTED: similar to Protein FAM27D1 [Homo sapiens]
Length = 131
Score = 199 bits (506), Expect = 5e-52
Identities = 98/121 (80%), Positives = 102/121 (84%), Gaps = 3/121 (2%)
Query: 1 MGMRFQLLRERRISSRGPGFQAPKADPPRRKRLTAGLMTQVETQKEAHQRQAAMRQTALW 60
MGMRFQLLR+RRISSRGPG A KADP RRK+LT GLMTQ ETQKEAHQRQAAM +T LW
Sbjct: 1 MGMRFQLLRDRRISSRGPGPHAHKADPWRRKQLTTGLMTQAETQKEAHQRQAAMPETVLW 60
Query: 61 RTGHIRPKTHTHTGIHTQTHRERERNTQRLRDRERRENGRHTHTHTHTHTQRHTAEALKH 120
TGHIRPKTHTH G H QTHR+RERNTQRLRDRERRENGRHTHTHT THT HT KH
Sbjct: 61 CTGHIRPKTHTHKGTHAQTHRKRERNTQRLRDRERRENGRHTHTHTDTHTHTHTH---KH 117
Query: 121 T 121
T
Sbjct: 118 T 118
>gi|239749126 PREDICTED: hypothetical protein XP_002346920 [Homo
sapiens]
Length = 131
Score = 199 bits (506), Expect = 5e-52
Identities = 98/121 (80%), Positives = 102/121 (84%), Gaps = 3/121 (2%)
Query: 1 MGMRFQLLRERRISSRGPGFQAPKADPPRRKRLTAGLMTQVETQKEAHQRQAAMRQTALW 60
MGMRFQLLR+RRISSRGPG A KADP RRK+LT GLMTQ ETQKEAHQRQAAM +T LW
Sbjct: 1 MGMRFQLLRDRRISSRGPGPHAHKADPWRRKQLTTGLMTQAETQKEAHQRQAAMPETVLW 60
Query: 61 RTGHIRPKTHTHTGIHTQTHRERERNTQRLRDRERRENGRHTHTHTHTHTQRHTAEALKH 120
TGHIRPKTHTH G H QTHR+RERNTQRLRDRERRENGRHTHTHT THT HT KH
Sbjct: 61 CTGHIRPKTHTHKGTHAQTHRKRERNTQRLRDRERRENGRHTHTHTDTHTHTHTH---KH 117
Query: 121 T 121
T
Sbjct: 118 T 118
>gi|239743178 PREDICTED: hypothetical protein XP_002342769 [Homo
sapiens]
Length = 174
Score = 199 bits (506), Expect = 5e-52
Identities = 98/121 (80%), Positives = 102/121 (84%), Gaps = 3/121 (2%)
Query: 1 MGMRFQLLRERRISSRGPGFQAPKADPPRRKRLTAGLMTQVETQKEAHQRQAAMRQTALW 60
MGMRFQLLR+RRISSRGPG A KADP RRK+LT GLMTQ ETQKEAHQRQAAM +T LW
Sbjct: 1 MGMRFQLLRDRRISSRGPGPHAHKADPWRRKQLTTGLMTQAETQKEAHQRQAAMPETVLW 60
Query: 61 RTGHIRPKTHTHTGIHTQTHRERERNTQRLRDRERRENGRHTHTHTHTHTQRHTAEALKH 120
TGHIRPKTHTH G H QTHR+RERNTQRLRDRERRENGRHTHTHT THT HT KH
Sbjct: 61 CTGHIRPKTHTHKGTHAQTHRKRERNTQRLRDRERRENGRHTHTHTDTHTHTHTH---KH 117
Query: 121 T 121
T
Sbjct: 118 T 118
>gi|239508842 PREDICTED: similar to Protein FAM27D1 [Homo sapiens]
Length = 174
Score = 199 bits (506), Expect = 5e-52
Identities = 98/121 (80%), Positives = 102/121 (84%), Gaps = 3/121 (2%)
Query: 1 MGMRFQLLRERRISSRGPGFQAPKADPPRRKRLTAGLMTQVETQKEAHQRQAAMRQTALW 60
MGMRFQLLR+RRISSRGPG A KADP RRK+LT GLMTQ ETQKEAHQRQAAM +T LW
Sbjct: 1 MGMRFQLLRDRRISSRGPGPHAHKADPWRRKQLTTGLMTQAETQKEAHQRQAAMPETVLW 60
Query: 61 RTGHIRPKTHTHTGIHTQTHRERERNTQRLRDRERRENGRHTHTHTHTHTQRHTAEALKH 120
TGHIRPKTHTH G H QTHR+RERNTQRLRDRERRENGRHTHTHT THT HT KH
Sbjct: 61 CTGHIRPKTHTHKGTHAQTHRKRERNTQRLRDRERRENGRHTHTHTDTHTHTHTH---KH 117
Query: 121 T 121
T
Sbjct: 118 T 118
>gi|169184221 PREDICTED: family with sequence similarity 27, member
E3 [Homo sapiens]
Length = 113
Score = 190 bits (482), Expect = 3e-49
Identities = 89/108 (82%), Positives = 95/108 (87%)
Query: 5 FQLLRERRISSRGPGFQAPKADPPRRKRLTAGLMTQVETQKEAHQRQAAMRQTALWRTGH 64
FQLLR+RRISSRGPG PKA+P RRK LT GLMTQ E QK+AHQRQAAMR+TALW TGH
Sbjct: 4 FQLLRDRRISSRGPGLHTPKAEPRRRKGLTTGLMTQAERQKQAHQRQAAMRETALWCTGH 63
Query: 65 IRPKTHTHTGIHTQTHRERERNTQRLRDRERRENGRHTHTHTHTHTQR 112
IRP+THTHTG HTQT RERERNTQRLRDRERRENGRHTHT+TH HT R
Sbjct: 64 IRPRTHTHTGTHTQTDRERERNTQRLRDRERRENGRHTHTYTHRHTHR 111
>gi|169177259 PREDICTED: similar to Protein FAM27E2 [Homo sapiens]
Length = 113
Score = 187 bits (474), Expect = 2e-48
Identities = 88/108 (81%), Positives = 94/108 (87%)
Query: 5 FQLLRERRISSRGPGFQAPKADPPRRKRLTAGLMTQVETQKEAHQRQAAMRQTALWRTGH 64
FQLLR+RRISSRGPG PKA+ RRK LT GLMTQ E QK+AHQRQAAMR+TALW TGH
Sbjct: 4 FQLLRDRRISSRGPGLHTPKAETRRRKGLTTGLMTQAERQKQAHQRQAAMRETALWCTGH 63
Query: 65 IRPKTHTHTGIHTQTHRERERNTQRLRDRERRENGRHTHTHTHTHTQR 112
IRP+THTHTG HTQT RERERNTQRLRDRERRENGRHTHT+TH HT R
Sbjct: 64 IRPRTHTHTGTHTQTDRERERNTQRLRDRERRENGRHTHTYTHRHTHR 111
>gi|239758105 PREDICTED: similar to Protein FAM27D1 [Homo sapiens]
Length = 134
Score = 181 bits (459), Expect = 1e-46
Identities = 95/140 (67%), Positives = 102/140 (72%), Gaps = 20/140 (14%)
Query: 1 MGMRFQLLRERRISSRGPGFQAPKADPPRRKRLTAGLMTQVETQKEAHQRQAAMRQTALW 60
MGMRFQLLR+R ISS GPG PKA P RR+RLT G TQ ETQKEAHQRQA MR+ ALW
Sbjct: 1 MGMRFQLLRDRCISSHGPGLHTPKAGPRRRRRLTTGCTTQAETQKEAHQRQADMREIALW 60
Query: 61 RTGHIRPKTHTHTGIHTQTHRERERNTQRLRDRERRENGRHT----------HTHTHTHT 110
RTG IRP+T + QT RERERNTQR RD+ER+ENGRHT HTHTHTHT
Sbjct: 61 RTGRIRPET------YMQTDRERERNTQRPRDKERKENGRHTHTHTLTHTHSHTHTHTHT 114
Query: 111 QRHT----AEALKHTPPGNP 126
Q HT AEALKHTPPGNP
Sbjct: 115 QTHTQDHRAEALKHTPPGNP 134
>gi|239743781 PREDICTED: hypothetical protein XP_002344297 [Homo
sapiens]
Length = 228
Score = 55.5 bits (132), Expect = 1e-08
Identities = 45/113 (39%), Positives = 55/113 (48%), Gaps = 17/113 (15%)
Query: 21 QAPKADPPRRKRLTAGLMTQVETQKEAHQRQAAM-RQTALWRTGHIRPK-THTHTGIHTQ 78
Q PK +PP KRL G TQ ET+ EA Q++ R A G P+ THT T +
Sbjct: 9 QTPKPEPPG-KRLPTGHNTQAETRGEADQKKGRRARNPASGAQGTCVPRRTHTQTDRDRK 67
Query: 79 THRERERN-----TQRLRDRERRENGRHTHT----HTHTHTQRHTAEALKHTP 122
R +ER +R R+R +RE T T HTHT T RHT HTP
Sbjct: 68 RGRRKEREGREGERERERERLKRETVVGTQTRARAHTHTQTHRHT-----HTP 115
>gi|169209818 PREDICTED: hypothetical protein [Homo sapiens]
Length = 135
Score = 40.4 bits (93), Expect = 4e-04
Identities = 17/27 (62%), Positives = 20/27 (74%)
Query: 69 THTHTGIHTQTHRERERNTQRLRDRER 95
THTHT HT+ RE ER T+R R+RER
Sbjct: 74 THTHTHTHTENERESERETERERERER 100
Score = 27.7 bits (60), Expect = 2.4
Identities = 9/14 (64%), Positives = 11/14 (78%)
Query: 101 HTHTHTHTHTQRHT 114
HTHTHTHT +R +
Sbjct: 75 HTHTHTHTENERES 88
Score = 27.3 bits (59), Expect = 3.2
Identities = 9/10 (90%), Positives = 10/10 (100%)
Query: 102 THTHTHTHTQ 111
THTHTHTHT+
Sbjct: 74 THTHTHTHTE 83
>gi|239747174 PREDICTED: hypothetical protein XP_002343931, partial
[Homo sapiens]
Length = 213
Score = 37.7 bits (86), Expect = 0.002
Identities = 25/74 (33%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Query: 42 ETQKEAHQRQAAMRQTALWRTGHIRPKTHTHTGIHTQT-HRERERNTQRLRDRERRENGR 100
E QKE + + R+T R + T T+ HRERER +R R+R+R R
Sbjct: 125 EKQKEMGRERQTDRETDRERERQAERERETGRERKTEDRHRERERERKRERERKRETKER 184
Query: 101 HTHTHTHTHTQRHT 114
HT QR T
Sbjct: 185 ERHTDMERERQRET 198
Score = 36.2 bits (82), Expect = 0.007
Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 7/78 (8%)
Query: 42 ETQKEAHQRQAAMRQTALWRTGHIRPKTHTHTGIHTQTHRER----ERNTQRLRDRER-- 95
+T +E +++ R R T HT+T RER ER +R+RDRER
Sbjct: 67 QTDREGERQRERERDRDRQRETERERDKERETDRHTETDRERQKQKEREMERVRDREREK 126
Query: 96 -RENGRHTHTHTHTHTQR 112
+E GR T T +R
Sbjct: 127 QKEMGRERQTDRETDRER 144
Score = 32.0 bits (71), Expect = 0.13
Identities = 29/86 (33%), Positives = 34/86 (39%), Gaps = 7/86 (8%)
Query: 34 TAGLMTQVETQKEAHQRQAAMRQTALWRTGHIRPKTHTHTGIHTQTHRERERNTQRLRDR 93
T G T ET+ QR+ R+T R KT R+RERN +R RDR
Sbjct: 5 TEGRHTHTETETMDRQRERR-RETDRERDRAKESKTEDRHS-ERDRQRDRERNRERDRDR 62
Query: 94 ER-----RENGRHTHTHTHTHTQRHT 114
ER RE R QR T
Sbjct: 63 EREKQTDREGERQRERERDRDRQRET 88
Score = 30.4 bits (67), Expect = 0.37
Identities = 21/80 (26%), Positives = 29/80 (36%)
Query: 42 ETQKEAHQRQAAMRQTALWRTGHIRPKTHTHTGIHTQTHRERERNTQRLRDRERRENGRH 101
+ QKE + R+ + +T T + ERER T R R E R R
Sbjct: 109 QKQKEREMERVRDREREKQKEMGRERQTDRETDRERERQAERERETGRERKTEDRHRERE 168
Query: 102 THTHTHTHTQRHTAEALKHT 121
+R T E +HT
Sbjct: 169 RERKRERERKRETKERERHT 188
Score = 29.6 bits (65), Expect = 0.64
Identities = 12/20 (60%), Positives = 14/20 (70%)
Query: 76 HTQTHRERERNTQRLRDRER 95
HT RER+R T R RDR+R
Sbjct: 187 HTDMERERQRETDRKRDRQR 206
Score = 25.8 bits (55), Expect = 9.2
Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 13/45 (28%)
Query: 81 RERERNT----QRLRDRER---------RENGRHTHTHTHTHTQR 112
RERE+ T +R R+RER RE + T HT T R
Sbjct: 62 REREKQTDREGERQRERERDRDRQRETERERDKERETDRHTETDR 106
>gi|153945755 zinc finger protein 608 [Homo sapiens]
Length = 1512
Score = 37.0 bits (84), Expect = 0.004
Identities = 16/28 (57%), Positives = 17/28 (60%)
Query: 82 ERERNTQRLRDRERRENGRHTHTHTHTH 109
ERER +R RDR RH HTH HTH
Sbjct: 1440 EREREAERERDRHSPFGQRHLHTHHHTH 1467
>gi|169171485 PREDICTED: hypothetical protein [Homo sapiens]
Length = 349
Score = 35.0 bits (79), Expect = 0.015
Identities = 30/93 (32%), Positives = 37/93 (39%), Gaps = 11/93 (11%)
Query: 19 GFQAPKA----DPPRRKRLTAGLMTQVETQKEAHQRQAAMRQTALWRTGHIRPKTHTHTG 74
GF+ P P R K L A + T K AA + TAL R + H+
Sbjct: 162 GFRVPSGVGWGGPERPKALKAAWPAPLSTAKAPAGLSAAQQVTALQRLLEL------HSA 215
Query: 75 IHTQTHRERERNTQRLRDRERRENGRHTHTHTH 107
Q R R+R QRLR ER R+ H H
Sbjct: 216 ARRQ-RRRRDREQQRLRVLERLHIARNRHCRVH 247
>gi|49574498 hypothetical protein LOC118461 isoform 2 [Homo sapiens]
Length = 719
Score = 34.3 bits (77), Expect = 0.026
Identities = 19/47 (40%), Positives = 22/47 (46%), Gaps = 7/47 (14%)
Query: 68 KTHT-HTGIHTQTHRERERNTQRLRDRERRENGRHTHTHTHTHTQRH 113
KTH G+ +E E +RE HTHTHTHTHT H
Sbjct: 664 KTHQLENGLSRSVSQETEP------EREAGLQNTHTHTHTHTHTHDH 704
Score = 33.5 bits (75), Expect = 0.044
Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Query: 63 GHIRPKTHTHTGIHTQTHRERERNTQRLRDRERRENGRHTHTHTHTHTQRH 113
G K TH + R + T+ R+ + HTHTHTHTH +H
Sbjct: 657 GGATEKMKTHQ-LENGLSRSVSQETEPEREAGLQNTHTHTHTHTHTHDHQH 706
Score = 26.6 bits (57), Expect = 5.4
Identities = 9/12 (75%), Positives = 10/12 (83%)
Query: 103 HTHTHTHTQRHT 114
+THTHTHT HT
Sbjct: 690 NTHTHTHTHTHT 701
>gi|169167062 PREDICTED: hypothetical protein LOC285556 [Homo
sapiens]
Length = 1826
Score = 33.9 bits (76), Expect = 0.034
Identities = 19/79 (24%), Positives = 34/79 (43%)
Query: 24 KADPPRRKRLTAGLMTQVETQKEAHQRQAAMRQTALWRTGHIRPKTHTHTGIHTQTHRER 83
+AD P++ + + L+ V ++K + + M + + T H T T + R+R
Sbjct: 832 RADGPQKSKFASSLLKNVISKKMQREHEFKMERGEVMDTSHHLSGTSKETEGARGSERQR 891
Query: 84 ERNTQRLRDRERRENGRHT 102
ER QR R +T
Sbjct: 892 ERGLQRQSSRHSEAGSEYT 910
>gi|113416182 PREDICTED: hypothetical protein LOC285556 [Homo
sapiens]
Length = 1826
Score = 33.9 bits (76), Expect = 0.034
Identities = 19/79 (24%), Positives = 34/79 (43%)
Query: 24 KADPPRRKRLTAGLMTQVETQKEAHQRQAAMRQTALWRTGHIRPKTHTHTGIHTQTHRER 83
+AD P++ + + L+ V ++K + + M + + T H T T + R+R
Sbjct: 832 RADGPQKSKFASSLLKNVISKKMQREHEFKMERGEVMDTSHHLSGTSKETEGARGSERQR 891
Query: 84 ERNTQRLRDRERRENGRHT 102
ER QR R +T
Sbjct: 892 ERGLQRQSSRHSEAGSEYT 910
>gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo
sapiens]
Length = 600
Score = 33.9 bits (76), Expect = 0.034
Identities = 19/74 (25%), Positives = 32/74 (43%)
Query: 39 TQVETQKEAHQRQAAMRQTALWRTGHIRPKTHTHTGIHTQTHRERERNTQRLRDRERREN 98
T+ E +++ + + R+T R + + RERER+ R RDR ++E
Sbjct: 220 TETERKRQTDRERDRQRKTEREREKQAERERASERETERDKERERERDRDRDRDRRQKER 279
Query: 99 GRHTHTHTHTHTQR 112
R T T+R
Sbjct: 280 ERQTDRKRQRRTER 293
Score = 33.5 bits (75), Expect = 0.044
Identities = 23/92 (25%), Positives = 37/92 (40%)
Query: 9 RERRISSRGPGFQAPKADPPRRKRLTAGLMTQVETQKEAHQRQAAMRQTALWRTGHIRPK 68
RER+ + K + R + + E +E + + RQT + R + +
Sbjct: 301 RERQRERERERERNRKRERERERERERERQRETERDREKERERKRKRQTEMDRERNRQTG 360
Query: 69 THTHTGIHTQTHRERERNTQRLRDRERRENGR 100
+ RERER+ Q R+RE RE R
Sbjct: 361 REGRRQAERERERERERDRQSAREREERERDR 392
Score = 33.1 bits (74), Expect = 0.058
Identities = 19/66 (28%), Positives = 31/66 (46%)
Query: 39 TQVETQKEAHQRQAAMRQTALWRTGHIRPKTHTHTGIHTQTHRERERNTQRLRDRERREN 98
T+ ET+++ + RQ R + + + T+ +ERER R RDR+RR+
Sbjct: 218 TETETERKRQTDRERDRQRKTEREREKQAERERASERETERDKERERERDRDRDRDRRQK 277
Query: 99 GRHTHT 104
R T
Sbjct: 278 ERERQT 283
Score = 32.3 bits (72), Expect = 0.098
Identities = 29/100 (29%), Positives = 40/100 (40%), Gaps = 9/100 (9%)
Query: 16 RGPGFQAPKADPPRRKRLTAGLMTQVETQKEAHQRQAAMRQTALWRTGHIRPKTHTHTGI 75
RG G AD R+R Q E ++ +RQ R+T R H
Sbjct: 40 RGLGQAHKDADGDDRER-----NRQKERERRREKRQTE-RETDRKRERRREKDRHRKRDR 93
Query: 76 HTQTHRERERNTQRLRDRER---RENGRHTHTHTHTHTQR 112
H + R+RE+ +R DRER RE R+ T+R
Sbjct: 94 HRERQRDREKERERQTDRERDRQREKERNRQKERERETER 133
Score = 31.6 bits (70), Expect = 0.17
Identities = 25/91 (27%), Positives = 37/91 (40%), Gaps = 20/91 (21%)
Query: 40 QVETQKEAHQRQAAMRQTALWRTGHIRPKTHTHTGIHTQTHRERERNTQRLRDRER---- 95
Q + Q+E +++ A ++ R + T + Q RERE+N Q R+RER
Sbjct: 142 QTDGQRERERQRDAEKE----RERQTDRERQRQTERNRQKEREREKNRQERRERERQREK 197
Query: 96 ------------RENGRHTHTHTHTHTQRHT 114
RE R T T T +R T
Sbjct: 198 ENKTEDRHSERGRERERERETETETERKRQT 228
Score = 28.9 bits (63), Expect = 1.1
Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 6/80 (7%)
Query: 39 TQVETQKEAHQRQAAMRQTALWRT-----GHIRPKTHTHTGIHTQTHRERERNTQRLRDR 93
T+ E +K+A + +A+ R+T + R + QT R+R+R T+R R+
Sbjct: 238 TEREREKQAERERASERETERDKERERERDRDRDRDRRQKERERQTDRKRQRRTERDRET 297
Query: 94 ER-RENGRHTHTHTHTHTQR 112
ER RE R + +R
Sbjct: 298 ERKRERQRERERERERNRKR 317
Score = 28.5 bits (62), Expect = 1.4
Identities = 21/61 (34%), Positives = 23/61 (37%), Gaps = 3/61 (4%)
Query: 55 RQTALWRTGHIRPKTHTHTGIHTQTHRERERNTQRLRDRER---RENGRHTHTHTHTHTQ 111
RQT R T Q RERER R R+RER RE R T +
Sbjct: 281 RQTDRKRQRRTERDRETERKRERQRERERERERNRKRERERERERERERQRETERDREKE 340
Query: 112 R 112
R
Sbjct: 341 R 341
Score = 28.1 bits (61), Expect = 1.8
Identities = 27/116 (23%), Positives = 45/116 (38%), Gaps = 12/116 (10%)
Query: 9 RERRISSRGPGFQAPKADPPRRKRLTAGLMTQVETQKEAHQRQAAMRQ-----------T 57
RER + + D R+++ + E +K +R+ RQ +
Sbjct: 147 RERERQRDAEKERERQTDRERQRQTERNRQKEREREKNRQERRERERQREKENKTEDRHS 206
Query: 58 ALWRTGHIRPKTHTHTGIHTQTHRERERNTQRLRDRERR-ENGRHTHTHTHTHTQR 112
R +T T T QT RER+R + R+RE++ E R + T +R
Sbjct: 207 ERGRERERERETETETERKRQTDRERDRQRKTEREREKQAERERASERETERDKER 262
Score = 27.3 bits (59), Expect = 3.2
Identities = 22/94 (23%), Positives = 37/94 (39%), Gaps = 1/94 (1%)
Query: 30 RKRLTAGLMTQVETQKEAHQRQAAMRQTALWRTGHIRPKTHTHTGIHTQTHRERERNTQR 89
R R +A + E ++ +++ RQT R G + ++ R RER +R
Sbjct: 377 RDRQSAREREERERDRDRDRQKERERQTEKDRDGQRETEKQREREKDRESERGRERGRER 436
Query: 90 LRDRERRENGRHTHTHTHTHTQRHTAEALKHTPP 123
++ RE R T QR + + PP
Sbjct: 437 -EKQKGRERDRERQTDRQAGRQRKRSTLYVNPPP 469
Score = 26.6 bits (57), Expect = 5.4
Identities = 25/101 (24%), Positives = 38/101 (37%), Gaps = 12/101 (11%)
Query: 24 KADPPRRKRLTAGLMTQVETQKEAHQ-----------RQAAMRQTALWRTGHIRPKTHTH 72
K + R K+ ++ ET+++ + R+ R+ R R +
Sbjct: 237 KTEREREKQAERERASERETERDKERERERDRDRDRDRRQKERERQTDRKRQRRTERDRE 296
Query: 73 TGIHTQTHRERERNTQRLRDRER-RENGRHTHTHTHTHTQR 112
T + RERER +R R RER RE R T R
Sbjct: 297 TERKRERQRERERERERNRKRERERERERERERQRETERDR 337
Score = 26.2 bits (56), Expect = 7.0
Identities = 19/72 (26%), Positives = 30/72 (41%), Gaps = 7/72 (9%)
Query: 44 QKEAHQRQAAMRQTALWRTGHIRPKTHTHTGIHTQTHRERERNTQRLRDRERR---ENGR 100
+K+ H+++ R+ R + T RE+ERN Q+ R+RE E GR
Sbjct: 84 EKDRHRKRDRHRE----RQRDREKERERQTDRERDRQREKERNRQKERERETEREGERGR 139
Query: 101 HTHTHTHTHTQR 112
T +R
Sbjct: 140 DRQTDGQRERER 151
Score = 25.8 bits (55), Expect = 9.2
Identities = 19/69 (27%), Positives = 26/69 (37%), Gaps = 1/69 (1%)
Query: 44 QKEAHQRQAAMRQTALWRTGHIRPKTHTHTGIHTQTHRERERNTQRLRDRERRENGRHTH 103
QKE ++ RQ R K + R R+R +R R+RE RE R T
Sbjct: 276 QKERERQTDRKRQRRTERDRETERKRERQRERERERERNRKRERERERERE-RERQRETE 334
Query: 104 THTHTHTQR 112
+R
Sbjct: 335 RDREKERER 343
>gi|113415686 PREDICTED: hypothetical protein LOC285556 [Homo
sapiens]
Length = 1826
Score = 33.9 bits (76), Expect = 0.034
Identities = 19/79 (24%), Positives = 34/79 (43%)
Query: 24 KADPPRRKRLTAGLMTQVETQKEAHQRQAAMRQTALWRTGHIRPKTHTHTGIHTQTHRER 83
+AD P++ + + L+ V ++K + + M + + T H T T + R+R
Sbjct: 832 RADGPQKSKFASSLLKNVISKKMQREHEFKMERGEVMDTSHHLSGTSKETEGARGSERQR 891
Query: 84 ERNTQRLRDRERRENGRHT 102
ER QR R +T
Sbjct: 892 ERGLQRQSSRHSEAGSEYT 910
>gi|239747891 PREDICTED: hypothetical protein [Homo sapiens]
Length = 202
Score = 32.7 bits (73), Expect = 0.075
Identities = 24/74 (32%), Positives = 33/74 (44%), Gaps = 6/74 (8%)
Query: 42 ETQKEAHQRQAAMRQTALWRTGHIRPKTHTHTGIHTQTHRERERNTQRLRDRER---REN 98
ET++E +++ QT R + H QT RE+ER Q+ RDR+R RE
Sbjct: 16 ETERERDRQRERENQTERENRHRQRDR---HRERDRQTDREKERERQKERDRQRQRERET 72
Query: 99 GRHTHTHTHTHTQR 112
R T QR
Sbjct: 73 ERETERQRERQRQR 86
Score = 29.6 bits (65), Expect = 0.64
Identities = 14/45 (31%), Positives = 19/45 (42%)
Query: 68 KTHTHTGIHTQTHRERERNTQRLRDRERRENGRHTHTHTHTHTQR 112
K T G T+ R+R+R + +RE R R H T R
Sbjct: 8 KRETDRGKETERERDRQRERENQTERENRHRQRDRHRERDRQTDR 52
Score = 29.6 bits (65), Expect = 0.64
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Query: 40 QVETQKEAHQRQAAMRQTALWRTGHIRPKTHTHTGIHTQTHRERERNTQRLRDRER-REN 98
Q E Q++ +++ R+ R + +T + + + RER++ T+R RDRER R+
Sbjct: 79 QRERQRQRERKRQTDRERDKDRDRERKRETDRNRERNRKGGRERDKQTERERDRERERQR 138
Query: 99 GRHTHTHTHTHTQRHT 114
R +R T
Sbjct: 139 QRERERQRQRERKRET 154
Score = 29.3 bits (64), Expect = 0.83
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 5/64 (7%)
Query: 40 QVETQKEAHQRQAAMRQTALWRTGHIRPKTHTHTGIHTQTHRERERNTQRLRDRER-REN 98
Q + +KE +++ RQ R + T Q RER+R T R RD++R RE
Sbjct: 49 QTDREKERERQKERDRQ----RQRERETERETERQRERQRQRERKRQTDRERDKDRDRER 104
Query: 99 GRHT 102
R T
Sbjct: 105 KRET 108
Score = 28.9 bits (63), Expect = 1.1
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 78 QTHRERERNTQRLRDRER-RENGRHTHTHTHTHTQR 112
QT RER+R +R R RER R+ R T QR
Sbjct: 125 QTERERDRERERQRQRERERQRQRERKRETDRERQR 160
Score = 27.7 bits (60), Expect = 2.4
Identities = 12/33 (36%), Positives = 15/33 (45%)
Query: 82 ERERNTQRLRDRERRENGRHTHTHTHTHTQRHT 114
ERER+ QR R+ + RH H R T
Sbjct: 18 ERERDRQRERENQTERENRHRQRDRHRERDRQT 50
Score = 27.3 bits (59), Expect = 3.2
Identities = 19/74 (25%), Positives = 30/74 (40%), Gaps = 1/74 (1%)
Query: 40 QVETQKEAHQRQAAMRQTALWRTGHIRPKTHTHTGIHTQTHRERERNTQRLRDRER-REN 98
Q E ++ + + R+T R + + T R+RER + R+RER R+
Sbjct: 59 QKERDRQRQRERETERETERQRERQRQRERKRQTDRERDKDRDRERKRETDRNRERNRKG 118
Query: 99 GRHTHTHTHTHTQR 112
GR T R
Sbjct: 119 GRERDKQTERERDR 132
Score = 25.8 bits (55), Expect = 9.2
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 82 ERERNTQRLRDRERRENGRHTHTHTHTHTQRH 113
+R + T+R RDR+R + + H RH
Sbjct: 12 DRGKETERERDRQRERENQTERENRHRQRDRH 43
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.128 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,921,480
Number of Sequences: 37866
Number of extensions: 237317
Number of successful extensions: 2641
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 126
Number of HSP's successfully gapped in prelim test: 75
Number of HSP's that attempted gapping in prelim test: 1512
Number of HSP's gapped (non-prelim): 646
length of query: 126
length of database: 18,247,518
effective HSP length: 90
effective length of query: 36
effective length of database: 14,839,578
effective search space: 534224808
effective search space used: 534224808
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.