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Search of human proteins with 169173083
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169173083 PREDICTED: hypothetical protein LOC286177 [Homo
sapiens]
(282 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169172513 PREDICTED: hypothetical protein LOC286177 [Homo sap... 587 e-168
gi|169173083 PREDICTED: hypothetical protein LOC286177 [Homo sap... 587 e-168
gi|169173314 PREDICTED: hypothetical protein LOC286177 [Homo sap... 528 e-150
gi|41281612 zinc finger protein 828 [Homo sapiens] 43 4e-04
gi|4758392 forkhead box D1 [Homo sapiens] 35 0.097
gi|4507831 Unc-51-like kinase 1 [Homo sapiens] 34 0.16
gi|170650694 centaurin, gamma 1 isoform PIKE-L [Homo sapiens] 33 0.37
gi|4505531 oxysterol binding protein [Homo sapiens] 32 0.48
gi|123701326 zinc finger protein 831 [Homo sapiens] 32 0.48
gi|5031887 LIM domain containing preferred translocation partner... 32 0.63
gi|239755589 PREDICTED: hypothetical protein [Homo sapiens] 32 0.82
gi|25777671 protein phosphatase 1, regulatory subunit 10 [Homo s... 31 1.4
gi|239748046 PREDICTED: hypothetical protein XP_002346501 [Homo ... 31 1.4
gi|38788260 bromodomain PHD finger transcription factor isoform ... 31 1.4
gi|38788274 bromodomain PHD finger transcription factor isoform ... 31 1.4
gi|149158690 HLA-B associated transcript-2 [Homo sapiens] 31 1.4
gi|32261309 G protein-coupled receptor 135 [Homo sapiens] 30 1.8
gi|38327539 inositol polyphosphate-5-phosphatase E [Homo sapiens] 30 1.8
gi|110556644 zinc finger protein, multitype 1 [Homo sapiens] 30 2.4
gi|13994287 BTE-binding protein 4 [Homo sapiens] 30 3.1
gi|242247193 SH2B adaptor protein 2 [Homo sapiens] 30 3.1
gi|195546902 suppressor of Ty 5 homolog isoform b [Homo sapiens] 30 3.1
gi|195546900 suppressor of Ty 5 homolog isoform a [Homo sapiens] 30 3.1
gi|161169023 suppressor of Ty 5 homolog isoform a [Homo sapiens] 30 3.1
gi|20149524 suppressor of Ty 5 homolog isoform a [Homo sapiens] 30 3.1
gi|209977067 OTU domain containing 5 isoform c [Homo sapiens] 30 3.1
gi|33457350 OTU domain containing 5 isoform a [Homo sapiens] 30 3.1
gi|209977021 OTU domain containing 5 isoform b [Homo sapiens] 30 3.1
gi|209977019 OTU domain containing 5 isoform b [Homo sapiens] 30 3.1
gi|113930703 early B-cell factor 2 [Homo sapiens] 30 3.1
>gi|169172513 PREDICTED: hypothetical protein LOC286177 [Homo
sapiens]
Length = 282
Score = 587 bits (1512), Expect = e-168
Identities = 282/282 (100%), Positives = 282/282 (100%)
Query: 1 MPSRRLIQAVGLAAAAGLELAFSPIPLQPPPEYGGVSNWGNPGYFRDYYRGPQGQTLPWR 60
MPSRRLIQAVGLAAAAGLELAFSPIPLQPPPEYGGVSNWGNPGYFRDYYRGPQGQTLPWR
Sbjct: 1 MPSRRLIQAVGLAAAAGLELAFSPIPLQPPPEYGGVSNWGNPGYFRDYYRGPQGQTLPWR 60
Query: 61 LSHAVATAAAGGWKPVPSPILVAAECPAPGTPNFGRGSSRSSGLGLRSHLGPGADRTMSS 120
LSHAVATAAAGGWKPVPSPILVAAECPAPGTPNFGRGSSRSSGLGLRSHLGPGADRTMSS
Sbjct: 61 LSHAVATAAAGGWKPVPSPILVAAECPAPGTPNFGRGSSRSSGLGLRSHLGPGADRTMSS 120
Query: 121 FVATRGAITFRGASARWGPMALLRIFLLREFGDVPLREAGGSLSETPDEDLEYPQSCVQG 180
FVATRGAITFRGASARWGPMALLRIFLLREFGDVPLREAGGSLSETPDEDLEYPQSCVQG
Sbjct: 121 FVATRGAITFRGASARWGPMALLRIFLLREFGDVPLREAGGSLSETPDEDLEYPQSCVQG 180
Query: 181 NAWKLQRSLLLKRKGQSETYKKNMCRELRAVGWGLLEEVGRWGEAPPSELGAWGVGARGG 240
NAWKLQRSLLLKRKGQSETYKKNMCRELRAVGWGLLEEVGRWGEAPPSELGAWGVGARGG
Sbjct: 181 NAWKLQRSLLLKRKGQSETYKKNMCRELRAVGWGLLEEVGRWGEAPPSELGAWGVGARGG 240
Query: 241 LERMECVGRAVLVPRALGFLPWQTPQRLRCGRLGGGGPKSSL 282
LERMECVGRAVLVPRALGFLPWQTPQRLRCGRLGGGGPKSSL
Sbjct: 241 LERMECVGRAVLVPRALGFLPWQTPQRLRCGRLGGGGPKSSL 282
>gi|169173083 PREDICTED: hypothetical protein LOC286177 [Homo
sapiens]
Length = 282
Score = 587 bits (1512), Expect = e-168
Identities = 282/282 (100%), Positives = 282/282 (100%)
Query: 1 MPSRRLIQAVGLAAAAGLELAFSPIPLQPPPEYGGVSNWGNPGYFRDYYRGPQGQTLPWR 60
MPSRRLIQAVGLAAAAGLELAFSPIPLQPPPEYGGVSNWGNPGYFRDYYRGPQGQTLPWR
Sbjct: 1 MPSRRLIQAVGLAAAAGLELAFSPIPLQPPPEYGGVSNWGNPGYFRDYYRGPQGQTLPWR 60
Query: 61 LSHAVATAAAGGWKPVPSPILVAAECPAPGTPNFGRGSSRSSGLGLRSHLGPGADRTMSS 120
LSHAVATAAAGGWKPVPSPILVAAECPAPGTPNFGRGSSRSSGLGLRSHLGPGADRTMSS
Sbjct: 61 LSHAVATAAAGGWKPVPSPILVAAECPAPGTPNFGRGSSRSSGLGLRSHLGPGADRTMSS 120
Query: 121 FVATRGAITFRGASARWGPMALLRIFLLREFGDVPLREAGGSLSETPDEDLEYPQSCVQG 180
FVATRGAITFRGASARWGPMALLRIFLLREFGDVPLREAGGSLSETPDEDLEYPQSCVQG
Sbjct: 121 FVATRGAITFRGASARWGPMALLRIFLLREFGDVPLREAGGSLSETPDEDLEYPQSCVQG 180
Query: 181 NAWKLQRSLLLKRKGQSETYKKNMCRELRAVGWGLLEEVGRWGEAPPSELGAWGVGARGG 240
NAWKLQRSLLLKRKGQSETYKKNMCRELRAVGWGLLEEVGRWGEAPPSELGAWGVGARGG
Sbjct: 181 NAWKLQRSLLLKRKGQSETYKKNMCRELRAVGWGLLEEVGRWGEAPPSELGAWGVGARGG 240
Query: 241 LERMECVGRAVLVPRALGFLPWQTPQRLRCGRLGGGGPKSSL 282
LERMECVGRAVLVPRALGFLPWQTPQRLRCGRLGGGGPKSSL
Sbjct: 241 LERMECVGRAVLVPRALGFLPWQTPQRLRCGRLGGGGPKSSL 282
>gi|169173314 PREDICTED: hypothetical protein LOC286177 [Homo
sapiens]
Length = 287
Score = 528 bits (1359), Expect = e-150
Identities = 262/289 (90%), Positives = 266/289 (92%), Gaps = 9/289 (3%)
Query: 1 MPSRRLIQAVGLAAAAGLELAFSPIP------LQPPPEYGGVSNWGNPGYFRDYYRGPQG 54
MPSRRLIQAVGLAAAAGLELAFSPIP LQPPPEYGGVSNWGNPGYFRDYYRGPQG
Sbjct: 1 MPSRRLIQAVGLAAAAGLELAFSPIPPLPWVQLQPPPEYGGVSNWGNPGYFRDYYRGPQG 60
Query: 55 QTLPWRLSHAVATAAAGGWKPVPSPILVAAECPAPGTPNFGRGSS-RSSGLGLRSHLGPG 113
QTLPWRLSHAVATAAAGGWKPVPSPILVAAECPAPGTPNFGRG S + R+ L
Sbjct: 61 QTLPWRLSHAVATAAAGGWKPVPSPILVAAECPAPGTPNFGRGCSCHLHAVPTRARLRAV 120
Query: 114 ADRTMSSFVATRGAITFRGASARWGPMALLRIFLLREFGDVPLREAGGSLSETPDEDLEY 173
+ + FVATRGAITFRGASARWGPMALLRIFLLREFGDVPLREAGGSLSETPDEDLEY
Sbjct: 121 SGH--AQFVATRGAITFRGASARWGPMALLRIFLLREFGDVPLREAGGSLSETPDEDLEY 178
Query: 174 PQSCVQGNAWKLQRSLLLKRKGQSETYKKNMCRELRAVGWGLLEEVGRWGEAPPSELGAW 233
PQSCVQGNAWKLQRSLLLKRKGQSETYKKNMCRELRAVGWGLLEEVGRWGEAPPSELGAW
Sbjct: 179 PQSCVQGNAWKLQRSLLLKRKGQSETYKKNMCRELRAVGWGLLEEVGRWGEAPPSELGAW 238
Query: 234 GVGARGGLERMECVGRAVLVPRALGFLPWQTPQRLRCGRLGGGGPKSSL 282
GVGARGGLERMECVGRAVLVPRALGFLPWQTPQRLRCGRLGGGGPKSSL
Sbjct: 239 GVGARGGLERMECVGRAVLVPRALGFLPWQTPQRLRCGRLGGGGPKSSL 287
>gi|41281612 zinc finger protein 828 [Homo sapiens]
Length = 812
Score = 42.7 bits (99), Expect = 4e-04
Identities = 30/96 (31%), Positives = 42/96 (43%), Gaps = 7/96 (7%)
Query: 21 AFSPIPLQPPPEYGGVSNW--GNPGYFRDYYRGPQGQTLPWRLSHAVATAAAGGWKPVPS 78
A SP P +P P S W G PG R + P + PW+ + + + G WKP+PS
Sbjct: 295 AVSPEPRRPAPAVSPGS-WKPGPPGSPRPWKSNPSASSGPWKPAKPAPSVSPGPWKPIPS 353
Query: 79 PILVAAECPAPGTPNFGRGSSRSSGLGLRSHLGPGA 114
+ P TP+ S +SS + S P A
Sbjct: 354 ----VSPGPWKPTPSVSSASWKSSSVSPSSWKSPPA 385
>gi|4758392 forkhead box D1 [Homo sapiens]
Length = 465
Score = 34.7 bits (78), Expect = 0.097
Identities = 46/173 (26%), Positives = 57/173 (32%), Gaps = 47/173 (27%)
Query: 2 PSRRLIQAVGLAAAAGLELAFSPIPLQPPPEYGGVSNWGNPGYFRDYYRGPQGQTLPWRL 61
P L A AAAA SP P PPP +G + + Y P G LP L
Sbjct: 287 PPSALFAAAAAAAAAAAFHPHSPPP--PPPPHGAAAELARTAF--GYRPHPLGAALPGPL 342
Query: 62 ----------------------------------SHAVATAAAGGWKPVPSPILVAAECP 87
+ A A AA + PSP VAA P
Sbjct: 343 PASAAKAGGPGASALARSPFSIESIIGGSLGPAAAAAAAAQAAAAAQASPSPSPVAAP-P 401
Query: 88 APGTPNFGRGSSRSSGLGLRSHLGPGADRTMSSFVATRGAITFRGASARWGPM 140
APG S G ++ +GP A T S A A + +SA G +
Sbjct: 402 APG--------SSGGGCAAQAAVGPAAALTRSLVAAAAAAASSVSSSAALGTL 446
>gi|4507831 Unc-51-like kinase 1 [Homo sapiens]
Length = 1050
Score = 33.9 bits (76), Expect = 0.16
Identities = 33/99 (33%), Positives = 42/99 (42%), Gaps = 17/99 (17%)
Query: 20 LAFSPIPLQPPP--EYGGV-SNWGNPGYFRDYYRGPQGQTLPWRLSHAVATAAAGGWKPV 76
L F+ PP E+GGV + + G R Y PQ T+P R GW
Sbjct: 471 LGFARASPSPPAHAEHGGVLARKMSLGGGRPYTPSPQVGTIPER----------PGWSGT 520
Query: 77 PSPI---LVAAECPAPGTPNFGRGSSRSSGLGLRSHLGP 112
PSP + P PG+ + S R+SGLG R H P
Sbjct: 521 PSPQGAEMRGGRSPRPGS-SAPEHSPRTSGLGCRLHSAP 558
>gi|170650694 centaurin, gamma 1 isoform PIKE-L [Homo sapiens]
Length = 1192
Score = 32.7 bits (73), Expect = 0.37
Identities = 53/198 (26%), Positives = 74/198 (37%), Gaps = 32/198 (16%)
Query: 52 PQGQTLPWRLSHAVATAAAGGWKPVPSPILVAAECPAPGTP---NFGRGSSRS------- 101
P TLP S A A AA P P+P + E PAPG GR S+R
Sbjct: 290 PPPLTLPPTPSPATAVTAASAQPPGPAP-PITLEPPAPGLKRGREGGRASTRDRKMLKFI 348
Query: 102 SGLGLRSHLGPGADRTM---SSFVATRGAITFRGASARWGPMALLRI---FLLREFGDVP 155
SG+ +S GP + S + G+ GA R P A++ L R ++
Sbjct: 349 SGIFTKSTGGPPGSGPLPGPPSLSSGSGSRELLGAELRASPKAVINSQEWTLSRSIPELR 408
Query: 156 LREAGGSLSETPDEDLEYPQSCVQGNAWKLQRSLLLKRKGQSETYKKNMCRELRAVGWGL 215
L G + S + L S + K +SE YKK M + + +
Sbjct: 409 LGVLGDARSGKSSLIHRF-----------LTGSYQVLEKTESEQYKKEMLVDGQTHLVLI 457
Query: 216 LEEVGRWGEAPPSELGAW 233
EE G AP ++ W
Sbjct: 458 REEAG----APDAKFSGW 471
>gi|4505531 oxysterol binding protein [Homo sapiens]
Length = 807
Score = 32.3 bits (72), Expect = 0.48
Identities = 21/44 (47%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Query: 62 SHAVATAAAGGWKPVPSPILVAAECPAPGTPNFGRGSSRSSGLG 105
S V AAAGG P P VAA PAP P G G S + G G
Sbjct: 47 SGTVVAAAAGG--PGPGAGGVAAAGPAPAPPTGGSGGSGAGGSG 88
>gi|123701326 zinc finger protein 831 [Homo sapiens]
Length = 1677
Score = 32.3 bits (72), Expect = 0.48
Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Query: 172 EYPQSCVQ-GNAWKLQRSLLLKRKGQSETYKKNMCRELRAVGWGLLEEVGRWGEAPPSE 229
E P C G A+K Q +L R+ Q+ + E G GLLEE + GE P E
Sbjct: 169 ERPFPCATCGIAFKTQSNLYKHRRTQTHLNNSRLSSESEGAGGGLLEEGDKAGEPPRPE 227
>gi|5031887 LIM domain containing preferred translocation partner in
lipoma [Homo sapiens]
Length = 612
Score = 32.0 bits (71), Expect = 0.63
Identities = 31/106 (29%), Positives = 37/106 (34%), Gaps = 29/106 (27%)
Query: 17 GLELAFSPIP-LQPPPEYGGVSNWGNPGYFRDYYR---------------GPQGQTLPWR 60
G++ A+ P P LQP P YG N G Y+ YY G QG W+
Sbjct: 270 GMDYAYIPPPGLQPEPGYGYAPNQGR--YYEGYYAAGPGYGGRNDSDPTYGQQGHPNTWK 327
Query: 61 LSHAVATAAAG-----GWKPVPSPIL------VAAECPAPGTPNFG 95
AG G PV P V+A C P P G
Sbjct: 328 REPGYTPPGAGNQNPPGMYPVTGPKKTYITDPVSAPCAPPLQPKGG 373
>gi|239755589 PREDICTED: hypothetical protein [Homo sapiens]
Length = 356
Score = 31.6 bits (70), Expect = 0.82
Identities = 25/97 (25%), Positives = 40/97 (41%), Gaps = 17/97 (17%)
Query: 25 IPLQPPPEYGGVSNWGNPGYFRDYYRGPQGQTLPWRLSHAVATAAAGGWKP--------V 76
+P PPP+ +++WG P QG +P ++ A+ A G W+
Sbjct: 262 LPTPPPPDPAALTSWGLP--------QQQGACVPEGIALALRCRAMGPWEEQNWSATSGS 313
Query: 77 PSPILVAAECPAPGTPNFGRGSSRSSGLGLRSHLGPG 113
P P P P + R ++ + G+G R GPG
Sbjct: 314 PGPGPHPRSRPTPPRLPYPRRAAGTVGIG-RPSRGPG 349
>gi|25777671 protein phosphatase 1, regulatory subunit 10 [Homo
sapiens]
Length = 940
Score = 30.8 bits (68), Expect = 1.4
Identities = 33/99 (33%), Positives = 37/99 (37%), Gaps = 10/99 (10%)
Query: 29 PPPEYGGVSNWGNPGYFRDYYRG--PQGQTLPWRLSHAVATAAAGGWK--PVPSPILVAA 84
PPP GG W PG D RG +G P + GG + P P P A
Sbjct: 670 PPPPRGGDPFWDGPG---DPMRGGPMRGGPGPGPGPYHRGRGGRGGNEPPPPPPPFRGAR 726
Query: 85 ECPAPGTPNFGR---GSSRSSGLGLRSHLGPGADRTMSS 120
+ G P GR G G G R H GPG SS
Sbjct: 727 GGRSGGGPPNGRGGPGGGMVGGGGHRPHEGPGGGMGNSS 765
>gi|239748046 PREDICTED: hypothetical protein XP_002346501 [Homo
sapiens]
Length = 411
Score = 30.8 bits (68), Expect = 1.4
Identities = 27/66 (40%), Positives = 32/66 (48%), Gaps = 9/66 (13%)
Query: 70 AGGWKPVPSPILVAAECPAPGTPNFGRGSSRSSGL-GLR----SHLGPGADRTM----SS 120
AG P L A E P+P TP+ G GS+ GL GLR S LG G R + +S
Sbjct: 161 AGRVAGCPKAQLQAQESPSPLTPSGGPGSAEERGLGGLRGLECSRLGWGGGRCVRVLRAS 220
Query: 121 FVATRG 126
V RG
Sbjct: 221 CVGPRG 226
>gi|38788260 bromodomain PHD finger transcription factor isoform 2
[Homo sapiens]
Length = 2903
Score = 30.8 bits (68), Expect = 1.4
Identities = 28/100 (28%), Positives = 37/100 (37%), Gaps = 3/100 (3%)
Query: 13 AAAAGLELAFSPIPLQPPPEYGGVSNWGNP--GYFRDYYRGPQGQTLPWRLSHAVATAAA 70
AA A A +P P PPP G + + G R + Q + P + ++
Sbjct: 13 AAPAAERCAPAPPPPPPPPTSGPIGGLRSRHRGSSRGRWAAAQAEVAPKTRLSSPRGGSS 72
Query: 71 GGWKPVPSPILVAAECPAPGTPNFGRGSSRSSGLGLRSHL 110
KP P P APG G G R+ G G HL
Sbjct: 73 SRRKPPPPPP-APPSTSAPGRGGRGGGGGRTGGGGGGGHL 111
>gi|38788274 bromodomain PHD finger transcription factor isoform 1
[Homo sapiens]
Length = 2920
Score = 30.8 bits (68), Expect = 1.4
Identities = 28/100 (28%), Positives = 37/100 (37%), Gaps = 3/100 (3%)
Query: 13 AAAAGLELAFSPIPLQPPPEYGGVSNWGNP--GYFRDYYRGPQGQTLPWRLSHAVATAAA 70
AA A A +P P PPP G + + G R + Q + P + ++
Sbjct: 13 AAPAAERCAPAPPPPPPPPTSGPIGGLRSRHRGSSRGRWAAAQAEVAPKTRLSSPRGGSS 72
Query: 71 GGWKPVPSPILVAAECPAPGTPNFGRGSSRSSGLGLRSHL 110
KP P P APG G G R+ G G HL
Sbjct: 73 SRRKPPPPPP-APPSTSAPGRGGRGGGGGRTGGGGGGGHL 111
>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
Length = 2157
Score = 30.8 bits (68), Expect = 1.4
Identities = 12/25 (48%), Positives = 14/25 (56%)
Query: 23 SPIPLQPPPEYGGVSNWGNPGYFRD 47
+P P PPP G NWG PG + D
Sbjct: 407 APKPPLPPPHRGPAGNWGPPGDYPD 431
>gi|32261309 G protein-coupled receptor 135 [Homo sapiens]
Length = 494
Score = 30.4 bits (67), Expect = 1.8
Identities = 28/90 (31%), Positives = 36/90 (40%), Gaps = 16/90 (17%)
Query: 65 VATAAAGGWKPVPSPILVAAECPAPGTPNFG-RGSSRSSGLGLRSHLGPGADRTMSSFVA 123
VATAA G APG G G++R +G +R LGP A +S
Sbjct: 47 VATAALGNLSDASG----GGTAAAPGGGGLGGSGAAREAGAAVRRPLGPEAAPLLS---- 98
Query: 124 TRGAITFRGASARWGPMALLRIFLLREFGD 153
GA+ + LL IFLL G+
Sbjct: 99 -------HGAAVAAQALVLLLIFLLSSLGN 121
>gi|38327539 inositol polyphosphate-5-phosphatase E [Homo sapiens]
Length = 644
Score = 30.4 bits (67), Expect = 1.8
Identities = 19/68 (27%), Positives = 29/68 (42%)
Query: 52 PQGQTLPWRLSHAVATAAAGGWKPVPSPILVAAECPAPGTPNFGRGSSRSSGLGLRSHLG 111
P+G+TL +L A AG P A C P TP+ +R++ + R
Sbjct: 18 PEGRTLQGQLPGAPPAQRAGSPPDAPGSESPALACSTPATPSGEDPPARAAPIAPRPPAR 77
Query: 112 PGADRTMS 119
P +R +S
Sbjct: 78 PRLERALS 85
>gi|110556644 zinc finger protein, multitype 1 [Homo sapiens]
Length = 1006
Score = 30.0 bits (66), Expect = 2.4
Identities = 18/46 (39%), Positives = 19/46 (41%), Gaps = 4/46 (8%)
Query: 70 AGGWKPVPSPILVAAECPAPGTPNFGRGSSRSSGLGLRSHLGPGAD 115
A G P P P PAP +P G GS GL GP AD
Sbjct: 751 AAGAPPPPPP----GHAPAPESPRPGSGSGSGPGLAPARSPGPAAD 792
>gi|13994287 BTE-binding protein 4 [Homo sapiens]
Length = 252
Score = 29.6 bits (65), Expect = 3.1
Identities = 27/107 (25%), Positives = 35/107 (32%), Gaps = 11/107 (10%)
Query: 9 AVGLAAAAGLELAFSPIPLQPPPEYGGVSNWGNPGYFRDYYRGPQGQTLPWRLSHAVATA 68
A GL A A SP PPP S GP P L+ ++
Sbjct: 38 AAGLDVRAARREAASPGTPGPPPPPPAASG-----------PGPGAAAAPHLLAASILAD 86
Query: 69 AAGGWKPVPSPILVAAECPAPGTPNFGRGSSRSSGLGLRSHLGPGAD 115
GG P A+ A +P+ GR + +SH P D
Sbjct: 87 LRGGPGAAPGGASPASSSSAASSPSSGRAPGAAPSAAAKSHRCPFPD 133
>gi|242247193 SH2B adaptor protein 2 [Homo sapiens]
Length = 675
Score = 29.6 bits (65), Expect = 3.1
Identities = 32/107 (29%), Positives = 43/107 (40%), Gaps = 16/107 (14%)
Query: 24 PIPLQPPPEYGGVSNWGNPGYFRDYYRGPQ-GQTLPWRLSHAVATAAAGGWKPVPSP--- 79
PIPL E GG ++ Y R P+ G T P A A+ W P
Sbjct: 541 PIPL----ESGGSADITLRSYVRAQDPPPEPGPTPP------AAPASPACWSDSPGQHYF 590
Query: 80 -ILVAAECPAPGTPNFGRGSSRSSGLGLRSHLGPGADRTMSSFVATR 125
L AA CP P +P+ G+S SS + GP R + ++ R
Sbjct: 591 SSLAAAACP-PASPSDAAGASSSSASSSSAASGPAPPRPVEGQLSAR 636
>gi|195546902 suppressor of Ty 5 homolog isoform b [Homo sapiens]
Length = 1083
Score = 29.6 bits (65), Expect = 3.1
Identities = 22/82 (26%), Positives = 28/82 (34%), Gaps = 11/82 (13%)
Query: 19 ELAFSPIPLQPPPEYGGVSNWGNPGY-----------FRDYYRGPQGQTLPWRLSHAVAT 67
E AF P P YGG N PGY + G + S A
Sbjct: 833 EYAFDDEPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAP 892
Query: 68 AAAGGWKPVPSPILVAAECPAP 89
+ G ++P PSP P+P
Sbjct: 893 SPQGSYQPSPSPQSYHQVAPSP 914
>gi|195546900 suppressor of Ty 5 homolog isoform a [Homo sapiens]
Length = 1087
Score = 29.6 bits (65), Expect = 3.1
Identities = 22/82 (26%), Positives = 28/82 (34%), Gaps = 11/82 (13%)
Query: 19 ELAFSPIPLQPPPEYGGVSNWGNPGY-----------FRDYYRGPQGQTLPWRLSHAVAT 67
E AF P P YGG N PGY + G + S A
Sbjct: 837 EYAFDDEPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAP 896
Query: 68 AAAGGWKPVPSPILVAAECPAP 89
+ G ++P PSP P+P
Sbjct: 897 SPQGSYQPSPSPQSYHQVAPSP 918
>gi|161169023 suppressor of Ty 5 homolog isoform a [Homo sapiens]
Length = 1087
Score = 29.6 bits (65), Expect = 3.1
Identities = 22/82 (26%), Positives = 28/82 (34%), Gaps = 11/82 (13%)
Query: 19 ELAFSPIPLQPPPEYGGVSNWGNPGY-----------FRDYYRGPQGQTLPWRLSHAVAT 67
E AF P P YGG N PGY + G + S A
Sbjct: 837 EYAFDDEPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAP 896
Query: 68 AAAGGWKPVPSPILVAAECPAP 89
+ G ++P PSP P+P
Sbjct: 897 SPQGSYQPSPSPQSYHQVAPSP 918
>gi|20149524 suppressor of Ty 5 homolog isoform a [Homo sapiens]
Length = 1087
Score = 29.6 bits (65), Expect = 3.1
Identities = 22/82 (26%), Positives = 28/82 (34%), Gaps = 11/82 (13%)
Query: 19 ELAFSPIPLQPPPEYGGVSNWGNPGY-----------FRDYYRGPQGQTLPWRLSHAVAT 67
E AF P P YGG N PGY + G + S A
Sbjct: 837 EYAFDDEPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAP 896
Query: 68 AAAGGWKPVPSPILVAAECPAP 89
+ G ++P PSP P+P
Sbjct: 897 SPQGSYQPSPSPQSYHQVAPSP 918
>gi|209977067 OTU domain containing 5 isoform c [Homo sapiens]
Length = 349
Score = 29.6 bits (65), Expect = 3.1
Identities = 24/92 (26%), Positives = 33/92 (35%), Gaps = 12/92 (13%)
Query: 50 RGPQGQTLPWRLSHAVATAAAGGWKPVPSPILVAAECPAPGTPNFGRGSSRSSGLGLRSH 109
R P+ ++ H A G P P +L A+ P+P P G S
Sbjct: 229 RSPRQRSSASSPEHPELHAELGMKPPSPGTVLALAKPPSPCAP------------GTSSQ 276
Query: 110 LGPGADRTMSSFVATRGAITFRGASARWGPMA 141
GADR S V+ A+ R + P A
Sbjct: 277 FSAGADRATSPLVSLYPALECRALIQQMSPSA 308
>gi|33457350 OTU domain containing 5 isoform a [Homo sapiens]
Length = 571
Score = 29.6 bits (65), Expect = 3.1
Identities = 24/92 (26%), Positives = 33/92 (35%), Gaps = 12/92 (13%)
Query: 50 RGPQGQTLPWRLSHAVATAAAGGWKPVPSPILVAAECPAPGTPNFGRGSSRSSGLGLRSH 109
R P+ ++ H A G P P +L A+ P+P P G S
Sbjct: 451 RSPRQRSSASSPEHPELHAELGMKPPSPGTVLALAKPPSPCAP------------GTSSQ 498
Query: 110 LGPGADRTMSSFVATRGAITFRGASARWGPMA 141
GADR S V+ A+ R + P A
Sbjct: 499 FSAGADRATSPLVSLYPALECRALIQQMSPSA 530
>gi|209977021 OTU domain containing 5 isoform b [Homo sapiens]
Length = 566
Score = 29.6 bits (65), Expect = 3.1
Identities = 24/92 (26%), Positives = 33/92 (35%), Gaps = 12/92 (13%)
Query: 50 RGPQGQTLPWRLSHAVATAAAGGWKPVPSPILVAAECPAPGTPNFGRGSSRSSGLGLRSH 109
R P+ ++ H A G P P +L A+ P+P P G S
Sbjct: 446 RSPRQRSSASSPEHPELHAELGMKPPSPGTVLALAKPPSPCAP------------GTSSQ 493
Query: 110 LGPGADRTMSSFVATRGAITFRGASARWGPMA 141
GADR S V+ A+ R + P A
Sbjct: 494 FSAGADRATSPLVSLYPALECRALIQQMSPSA 525
>gi|209977019 OTU domain containing 5 isoform b [Homo sapiens]
Length = 566
Score = 29.6 bits (65), Expect = 3.1
Identities = 24/92 (26%), Positives = 33/92 (35%), Gaps = 12/92 (13%)
Query: 50 RGPQGQTLPWRLSHAVATAAAGGWKPVPSPILVAAECPAPGTPNFGRGSSRSSGLGLRSH 109
R P+ ++ H A G P P +L A+ P+P P G S
Sbjct: 446 RSPRQRSSASSPEHPELHAELGMKPPSPGTVLALAKPPSPCAP------------GTSSQ 493
Query: 110 LGPGADRTMSSFVATRGAITFRGASARWGPMA 141
GADR S V+ A+ R + P A
Sbjct: 494 FSAGADRATSPLVSLYPALECRALIQQMSPSA 525
>gi|113930703 early B-cell factor 2 [Homo sapiens]
Length = 575
Score = 29.6 bits (65), Expect = 3.1
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 9/72 (12%)
Query: 41 NPGYFRDYY----RGPQGQTLPWRLSHAVATAAAGGWKPVPSPILVAAECPAPGTPNFGR 96
N GY R+ RG + P + +++ ++ + G+ VP A PG+P F
Sbjct: 446 NQGYIRNTSSISPRGYSSSSTPQQSNYSTSSNSMNGYSNVPM-----ANLGVPGSPGFLN 500
Query: 97 GSSRSSGLGLRS 108
GS S G+ S
Sbjct: 501 GSPTGSPYGIMS 512
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.138 0.447
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,477,584
Number of Sequences: 37866
Number of extensions: 727716
Number of successful extensions: 2519
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 43
Number of HSP's that attempted gapping in prelim test: 2478
Number of HSP's gapped (non-prelim): 78
length of query: 282
length of database: 18,247,518
effective HSP length: 101
effective length of query: 181
effective length of database: 14,423,052
effective search space: 2610572412
effective search space used: 2610572412
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.