Search of human proteins with 169172807

Search of human proteins with 169172807

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|169172807 PREDICTED: hypothetical protein [Homo sapiens]
         (277 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169172807 PREDICTED: hypothetical protein [Homo sapiens]           556   e-159
gi|169172682 PREDICTED: hypothetical protein [Homo sapiens]           392   e-109
gi|169172911 PREDICTED: hypothetical protein [Homo sapiens]           392   e-109
gi|239743499 PREDICTED: hypothetical protein XP_002342866 [Homo ...   144   1e-34
gi|239752480 PREDICTED: hypothetical protein XP_002348290 [Homo ...   129   4e-30
gi|197927231 hypothetical protein LOC389152 [Homo sapiens]             44   2e-04
gi|197927236 hypothetical protein LOC729627 [Homo sapiens]             39   0.005
gi|61966747 hypothetical protein LOC389151 [Homo sapiens]              39   0.007
gi|109138557 protein tyrosine phosphatase, non-receptor type 20A...    35   0.072
gi|109138559 protein tyrosine phosphatase, non-receptor type 20A...    35   0.072
gi|108802604 protein tyrosine phosphatase, non-receptor type 20 ...    35   0.072
gi|45243554 protein tyrosine phosphatase, non-receptor type 20 i...    35   0.072
gi|203097003 Rho GTPase activating protein 21 [Homo sapiens]           34   0.12 
gi|66392146 RNA U, small nuclear RNA export adaptor (phosphoryla...    33   0.27 
gi|239751846 PREDICTED: similar to hCG2036794 [Homo sapiens]           33   0.36 
gi|239746337 PREDICTED: similar to hCG2036794 [Homo sapiens]           33   0.36 
gi|169213985 PREDICTED: similar to hCG2036794 [Homo sapiens]           32   0.80 
gi|237681119 breast cancer 1, early onset isoform 2 [Homo sapiens]     31   1.0  
gi|237681125 breast cancer 1, early onset isoform 5 [Homo sapiens]     31   1.0  
gi|237681123 breast cancer 1, early onset isoform 4 [Homo sapiens]     31   1.0  
gi|237681121 breast cancer 1, early onset isoform 3 [Homo sapiens]     31   1.0  
gi|6552299 breast cancer 1, early onset isoform 1 [Homo sapiens]       31   1.0  
gi|226528146 HRAS-like suppressor family, member 5 isoform 3 [Ho...    31   1.4  
gi|16905367 HRAS-like suppressor family, member 5 isoform 1 [Hom...    31   1.4  
gi|14589951 DNA directed RNA polymerase II polypeptide E [Homo s...    31   1.4  
gi|156119601 spermatogenesis and oogenesis specific basic helix-...    30   2.3  
gi|156119603 spermatogenesis and oogenesis specific basic helix-...    30   2.3  
gi|226491950 HRAS-like suppressor family, member 5 isoform 2 [Ho...    30   3.0  
gi|21735552 mitogen-activated protein kinase kinase kinase 12 [H...    29   3.9  
gi|21493022 A kinase (PRKA) anchor protein 12 isoform 1 [Homo sa...    29   5.2  

>gi|169172807 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 277

 Score =  556 bits (1434), Expect = e-159
 Identities = 277/277 (100%), Positives = 277/277 (100%)

Query: 1   MYGYRRLRSPRDSQTEPQNDNEGETSLATTQMNPPKRRQVEQGPSTGAKKPSISGAPHLN 60
           MYGYRRLRSPRDSQTEPQNDNEGETSLATTQMNPPKRRQVEQGPSTGAKKPSISGAPHLN
Sbjct: 1   MYGYRRLRSPRDSQTEPQNDNEGETSLATTQMNPPKRRQVEQGPSTGAKKPSISGAPHLN 60

Query: 61  SYQSLELPQNQQDSGTEELMIVLEQGTEVRLSLEEVILILAPETVLQLTLENTVLVIVPE 120
           SYQSLELPQNQQDSGTEELMIVLEQGTEVRLSLEEVILILAPETVLQLTLENTVLVIVPE
Sbjct: 61  SYQSLELPQNQQDSGTEELMIVLEQGTEVRLSLEEVILILAPETVLQLTLENTVLVIVPE 120

Query: 121 HVLRSEDGLQSPVQIQYIIPSVDDFSLEFHAQDGDISDMRRENVPFSPAEEGKAAPLYQQ 180
           HVLRSEDGLQSPVQIQYIIPSVDDFSLEFHAQDGDISDMRRENVPFSPAEEGKAAPLYQQ
Sbjct: 121 HVLRSEDGLQSPVQIQYIIPSVDDFSLEFHAQDGDISDMRRENVPFSPAEEGKAAPLYQQ 180

Query: 181 PLMIPQANHMAGISPSFLVRRPADDPLWPFSELSCHIVSFHTLWFLMVLLLLLSEEQRVD 240
           PLMIPQANHMAGISPSFLVRRPADDPLWPFSELSCHIVSFHTLWFLMVLLLLLSEEQRVD
Sbjct: 181 PLMIPQANHMAGISPSFLVRRPADDPLWPFSELSCHIVSFHTLWFLMVLLLLLSEEQRVD 240

Query: 241 LIHSGYGYFLGDLDNQDNDPQQRRKGSSQLVCLRKSH 277
           LIHSGYGYFLGDLDNQDNDPQQRRKGSSQLVCLRKSH
Sbjct: 241 LIHSGYGYFLGDLDNQDNDPQQRRKGSSQLVCLRKSH 277


>gi|169172682 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 237

 Score =  392 bits (1008), Expect = e-109
 Identities = 198/198 (100%), Positives = 198/198 (100%)

Query: 1   MYGYRRLRSPRDSQTEPQNDNEGETSLATTQMNPPKRRQVEQGPSTGAKKPSISGAPHLN 60
           MYGYRRLRSPRDSQTEPQNDNEGETSLATTQMNPPKRRQVEQGPSTGAKKPSISGAPHLN
Sbjct: 1   MYGYRRLRSPRDSQTEPQNDNEGETSLATTQMNPPKRRQVEQGPSTGAKKPSISGAPHLN 60

Query: 61  SYQSLELPQNQQDSGTEELMIVLEQGTEVRLSLEEVILILAPETVLQLTLENTVLVIVPE 120
           SYQSLELPQNQQDSGTEELMIVLEQGTEVRLSLEEVILILAPETVLQLTLENTVLVIVPE
Sbjct: 61  SYQSLELPQNQQDSGTEELMIVLEQGTEVRLSLEEVILILAPETVLQLTLENTVLVIVPE 120

Query: 121 HVLRSEDGLQSPVQIQYIIPSVDDFSLEFHAQDGDISDMRRENVPFSPAEEGKAAPLYQQ 180
           HVLRSEDGLQSPVQIQYIIPSVDDFSLEFHAQDGDISDMRRENVPFSPAEEGKAAPLYQQ
Sbjct: 121 HVLRSEDGLQSPVQIQYIIPSVDDFSLEFHAQDGDISDMRRENVPFSPAEEGKAAPLYQQ 180

Query: 181 PLMIPQANHMAGISPSFL 198
           PLMIPQANHMAGISPSFL
Sbjct: 181 PLMIPQANHMAGISPSFL 198



 Score = 42.4 bits (98), Expect = 5e-04
 Identities = 22/37 (59%), Positives = 29/37 (78%), Gaps = 1/37 (2%)

Query: 71  QQDSGTEELMIVL-EQGTEVRLSLEEVILILAPETVL 106
           QQ+S TE  +IV+ EQGTE+ L LEE +LIL+P+T L
Sbjct: 200 QQNSSTETFIIVVPEQGTELTLRLEEYVLILSPQTAL 236


>gi|169172911 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 237

 Score =  392 bits (1008), Expect = e-109
 Identities = 198/198 (100%), Positives = 198/198 (100%)

Query: 1   MYGYRRLRSPRDSQTEPQNDNEGETSLATTQMNPPKRRQVEQGPSTGAKKPSISGAPHLN 60
           MYGYRRLRSPRDSQTEPQNDNEGETSLATTQMNPPKRRQVEQGPSTGAKKPSISGAPHLN
Sbjct: 1   MYGYRRLRSPRDSQTEPQNDNEGETSLATTQMNPPKRRQVEQGPSTGAKKPSISGAPHLN 60

Query: 61  SYQSLELPQNQQDSGTEELMIVLEQGTEVRLSLEEVILILAPETVLQLTLENTVLVIVPE 120
           SYQSLELPQNQQDSGTEELMIVLEQGTEVRLSLEEVILILAPETVLQLTLENTVLVIVPE
Sbjct: 61  SYQSLELPQNQQDSGTEELMIVLEQGTEVRLSLEEVILILAPETVLQLTLENTVLVIVPE 120

Query: 121 HVLRSEDGLQSPVQIQYIIPSVDDFSLEFHAQDGDISDMRRENVPFSPAEEGKAAPLYQQ 180
           HVLRSEDGLQSPVQIQYIIPSVDDFSLEFHAQDGDISDMRRENVPFSPAEEGKAAPLYQQ
Sbjct: 121 HVLRSEDGLQSPVQIQYIIPSVDDFSLEFHAQDGDISDMRRENVPFSPAEEGKAAPLYQQ 180

Query: 181 PLMIPQANHMAGISPSFL 198
           PLMIPQANHMAGISPSFL
Sbjct: 181 PLMIPQANHMAGISPSFL 198



 Score = 42.4 bits (98), Expect = 5e-04
 Identities = 22/37 (59%), Positives = 29/37 (78%), Gaps = 1/37 (2%)

Query: 71  QQDSGTEELMIVL-EQGTEVRLSLEEVILILAPETVL 106
           QQ+S TE  +IV+ EQGTE+ L LEE +LIL+P+T L
Sbjct: 200 QQNSSTETFIIVVPEQGTELTLRLEEYVLILSPQTAL 236


>gi|239743499 PREDICTED: hypothetical protein XP_002342866 [Homo
           sapiens]
          Length = 82

 Score =  144 bits (362), Expect = 1e-34
 Identities = 69/78 (88%), Positives = 72/78 (92%)

Query: 199 VRRPADDPLWPFSELSCHIVSFHTLWFLMVLLLLLSEEQRVDLIHSGYGYFLGDLDNQDN 258
           V RPADDPLWPFSELS HIVSFH LWFL+VLLLLLSEEQRVDLI SGYGYF+GDLDNQDN
Sbjct: 4   VGRPADDPLWPFSELSGHIVSFHPLWFLVVLLLLLSEEQRVDLIDSGYGYFVGDLDNQDN 63

Query: 259 DPQQRRKGSSQLVCLRKS 276
           DPQ+RRKGSS LVCL KS
Sbjct: 64  DPQKRRKGSSHLVCLSKS 81


>gi|239752480 PREDICTED: hypothetical protein XP_002348290 [Homo
           sapiens]
          Length = 251

 Score =  129 bits (323), Expect = 4e-30
 Identities = 63/76 (82%), Positives = 66/76 (86%)

Query: 198 LVRRPADDPLWPFSELSCHIVSFHTLWFLMVLLLLLSEEQRVDLIHSGYGYFLGDLDNQD 257
           L  RPA D LWPFSELS HIVSFH LWF++VLLLLLSEEQRVDLI SGYGYFLGDLDNQD
Sbjct: 77  LFGRPAYDSLWPFSELSGHIVSFHALWFIVVLLLLLSEEQRVDLIDSGYGYFLGDLDNQD 136

Query: 258 NDPQQRRKGSSQLVCL 273
           NDPQQRRKGSS  + L
Sbjct: 137 NDPQQRRKGSSHSLLL 152


>gi|197927231 hypothetical protein LOC389152 [Homo sapiens]
          Length = 262

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 43/145 (29%), Positives = 68/145 (46%), Gaps = 12/145 (8%)

Query: 63  QSLELPQNQQDSGTEEL-----MIVLEQGTEVRLSLEEVILIL--APETVLQLTLENTVL 115
           +S   P  +  +GT  +     M+VL+ G  +R+ LE+V L+L  AP +VL+++L    L
Sbjct: 38  ESRAAPSPEDPAGTPAVDALTSMVVLDAGCALRVPLEDVDLVLELAPMSVLRVSLGGHTL 97

Query: 116 VIVPEHVLRSEDGLQSPVQIQYIIPSVDDFSLEFHAQDGDISDMRRENVPFSPAE----E 171
           +++PE +L S D   S  Q  +      D  L  H +D  +      +VP   AE    E
Sbjct: 98  IVIPEVLLSSVDEC-SGAQGDWSAGLEVDVFLGAHGEDVVVEQEVCASVPEIAAEEEAYE 156

Query: 172 GKAAPLYQQPLMIPQANHMAGISPS 196
             A   + +  M   A   AG+ PS
Sbjct: 157 EDADSEFPELWMDSAAGSAAGLYPS 181


>gi|197927236 hypothetical protein LOC729627 [Homo sapiens]
          Length = 266

 Score = 38.9 bits (89), Expect = 0.005
 Identities = 22/66 (33%), Positives = 39/66 (59%), Gaps = 2/66 (3%)

Query: 64  SLELPQNQQDSGTEELMIVLEQGTEVRLSLEEV--ILILAPETVLQLTLENTVLVIVPEH 121
           SLE P      G    ++VL  G  +R+ L++V  +L L P ++L+++L+   L+++PE 
Sbjct: 44  SLEDPAGTPAVGALTSIVVLAAGCALRVPLDDVDLVLELPPTSILRVSLDGHTLILIPEV 103

Query: 122 VLRSED 127
           +L S D
Sbjct: 104 LLSSVD 109


>gi|61966747 hypothetical protein LOC389151 [Homo sapiens]
          Length = 265

 Score = 38.5 bits (88), Expect = 0.007
 Identities = 43/166 (25%), Positives = 75/166 (45%), Gaps = 20/166 (12%)

Query: 43  GPSTGAKKPSISGAPHLNSYQSLELPQNQQDSGTEELMIVLEQGTEVRLSLEEVILIL-- 100
           GP+   +    +G P   +  SLE P           ++VL  G  +R+ L++V L+L  
Sbjct: 24  GPAKRLRLEEPAG-PEPRAAPSLEDPAGDPAVDALTSIVVLAAGCALRVPLDDVDLVLEP 82

Query: 101 APETVLQLTLENTVLVIVPEHVLRSED---GLQ----SPVQIQYIIPSVDD---FSLEFH 150
           AP ++L+++L    L+++PE +L S D   G Q    + +++   + +V +     LEF 
Sbjct: 83  APTSILRVSLGGHTLILIPEVLLSSVDERSGAQHDSSAGLEVDVFLGAVREDVVVELEFC 142

Query: 151 AQDGDISDMRRENVPFSPAEEGKAAPLYQQPLMIPQANHMAGISPS 196
           A   +I+           A E  A P + +  M       AG+ PS
Sbjct: 143 ASVPEIAAQEE-------AYEEDADPEFPELRMDSPTGSAAGLYPS 181


>gi|109138557 protein tyrosine phosphatase, non-receptor type 20A
          isoform 1 [Homo sapiens]
          Length = 420

 Score = 35.0 bits (79), Expect = 0.072
 Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 14/85 (16%)

Query: 7  LRSPRDSQTEPQNDNEG-----------ETSLATTQMNPPKRRQVEQGPSTGAKKPSISG 55
          + SPRD + EP ND EG           ET  +++Q N P+ +  E   ++   K S+  
Sbjct: 1  MSSPRDFRAEPVNDYEGNDSEAEDLNFRETLPSSSQENTPRSKVFENKVNSEKVKLSLRN 60

Query: 56 APHLNSYQSLELPQNQQDSGTEELM 80
           PH N Y+  ++ +   +SG++  M
Sbjct: 61 FPH-NDYE--DVFEEPSESGSDPSM 82


>gi|109138559 protein tyrosine phosphatase, non-receptor type 20A
          isoform 2 [Homo sapiens]
          Length = 226

 Score = 35.0 bits (79), Expect = 0.072
 Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 14/85 (16%)

Query: 7  LRSPRDSQTEPQNDNEG-----------ETSLATTQMNPPKRRQVEQGPSTGAKKPSISG 55
          + SPRD + EP ND EG           ET  +++Q N P+ +  E   ++   K S+  
Sbjct: 1  MSSPRDFRAEPVNDYEGNDSEAEDLNFRETLPSSSQENTPRSKVFENKVNSEKVKLSLRN 60

Query: 56 APHLNSYQSLELPQNQQDSGTEELM 80
           PH N Y+  ++ +   +SG++  M
Sbjct: 61 FPH-NDYE--DVFEEPSESGSDPSM 82


>gi|108802604 protein tyrosine phosphatase, non-receptor type 20
          isoform 1 [Homo sapiens]
          Length = 420

 Score = 35.0 bits (79), Expect = 0.072
 Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 14/85 (16%)

Query: 7  LRSPRDSQTEPQNDNEG-----------ETSLATTQMNPPKRRQVEQGPSTGAKKPSISG 55
          + SPRD + EP ND EG           ET  +++Q N P+ +  E   ++   K S+  
Sbjct: 1  MSSPRDFRAEPVNDYEGNDSEAEDLNFRETLPSSSQENTPRSKVFENKVNSEKVKLSLRN 60

Query: 56 APHLNSYQSLELPQNQQDSGTEELM 80
           PH N Y+  ++ +   +SG++  M
Sbjct: 61 FPH-NDYE--DVFEEPSESGSDPSM 82


>gi|45243554 protein tyrosine phosphatase, non-receptor type 20
          isoform 2 [Homo sapiens]
          Length = 226

 Score = 35.0 bits (79), Expect = 0.072
 Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 14/85 (16%)

Query: 7  LRSPRDSQTEPQNDNEG-----------ETSLATTQMNPPKRRQVEQGPSTGAKKPSISG 55
          + SPRD + EP ND EG           ET  +++Q N P+ +  E   ++   K S+  
Sbjct: 1  MSSPRDFRAEPVNDYEGNDSEAEDLNFRETLPSSSQENTPRSKVFENKVNSEKVKLSLRN 60

Query: 56 APHLNSYQSLELPQNQQDSGTEELM 80
           PH N Y+  ++ +   +SG++  M
Sbjct: 61 FPH-NDYE--DVFEEPSESGSDPSM 82


>gi|203097003 Rho GTPase activating protein 21 [Homo sapiens]
          Length = 1958

 Score = 34.3 bits (77), Expect = 0.12
 Identities = 44/140 (31%), Positives = 66/140 (47%), Gaps = 24/140 (17%)

Query: 38  RQVEQGPSTGAKKPSISGAPHLNSYQSLELPQNQQDSGTEELMIVLEQGTEVRLSLEEVI 97
           +QVE G     K PS+SGA       +   PQ+ +++GT +L + + Q  +  LSL+E  
Sbjct: 675 QQVETG-----KSPSLSGA------SAKPAPQSSENAGTSDLELPVSQRNQ-DLSLQEA- 721

Query: 98  LILAPETVLQLTLENTVLVIVPEHVLRSEDGLQS--PVQIQYIIPSVDDFSLEFHAQDGD 155
                ET    TL+N   VI+ E   +   G Q+  P++ Q  I +V+D           
Sbjct: 722 -----ETEQSDTLDNKEAVILRE---KPPSGRQTPQPLRHQSYILAVNDQETGSDTTCWL 773

Query: 156 ISDMRRENVPFSPAEEGKAA 175
            +D RRE V     EE KA+
Sbjct: 774 PNDARRE-VHIKRMEERKAS 792


>gi|66392146 RNA U, small nuclear RNA export adaptor
           (phosphorylation regulated) [Homo sapiens]
          Length = 394

 Score = 33.1 bits (74), Expect = 0.27
 Identities = 30/115 (26%), Positives = 53/115 (46%), Gaps = 8/115 (6%)

Query: 4   YRRLRSPRDSQTEPQNDNEGETSLATTQMN-----PPKRRQVEQGPSTGAKKPSISGAPH 58
           YR + S  DS  E  +D++ ++ L   +       PPK    + G S+  +KP ++G   
Sbjct: 57  YRAVESV-DSSEESFSDSDDDSCLWKRKRQKCFNPPPKPEPFQFGQSS--QKPPVAGGKK 113

Query: 59  LNSYQSLELPQNQQDSGTEELMIVLEQGTEVRLSLEEVILILAPETVLQLTLENT 113
           +N+     L +  QD+   EL I+  +GT  R    E    L  + + + + E+T
Sbjct: 114 INNIWGAVLQEQNQDAVATELGILGMEGTIDRSRQSETYNYLLAKKLRKESQEHT 168


>gi|239751846 PREDICTED: similar to hCG2036794 [Homo sapiens]
          Length = 518

 Score = 32.7 bits (73), Expect = 0.36
 Identities = 22/82 (26%), Positives = 35/82 (42%)

Query: 12  DSQTEPQNDNEGETSLATTQMNPPKRRQVEQGPSTGAKKPSISGAPHLNSYQSLELPQNQ 71
           DS   P +D+ G   L   Q + PK   V    +  A  P++ G P   +  +L  PQ  
Sbjct: 317 DSPKLPTSDSPGMVELKAPQNSGPKESNVPPPSARIAGPPALPGRPSQLAPATLRAPQRH 376

Query: 72  QDSGTEELMIVLEQGTEVRLSL 93
                   +IV+E+  E  ++L
Sbjct: 377 SRGEGVNTIIVVERVKETGVTL 398


>gi|239746337 PREDICTED: similar to hCG2036794 [Homo sapiens]
          Length = 518

 Score = 32.7 bits (73), Expect = 0.36
 Identities = 22/82 (26%), Positives = 35/82 (42%)

Query: 12  DSQTEPQNDNEGETSLATTQMNPPKRRQVEQGPSTGAKKPSISGAPHLNSYQSLELPQNQ 71
           DS   P +D+ G   L   Q + PK   V    +  A  P++ G P   +  +L  PQ  
Sbjct: 317 DSPKLPTSDSPGMVELKAPQNSGPKESNVPPPSARIAGPPALPGRPSQLAPATLRAPQRH 376

Query: 72  QDSGTEELMIVLEQGTEVRLSL 93
                   +IV+E+  E  ++L
Sbjct: 377 SRGEGVNTIIVVERVKETGVTL 398


>gi|169213985 PREDICTED: similar to hCG2036794 [Homo sapiens]
          Length = 518

 Score = 31.6 bits (70), Expect = 0.80
 Identities = 21/82 (25%), Positives = 34/82 (41%)

Query: 12  DSQTEPQNDNEGETSLATTQMNPPKRRQVEQGPSTGAKKPSISGAPHLNSYQSLELPQNQ 71
           DS   P +D+ G   L   Q + PK        +  A  P++ G P   +  +L  PQ  
Sbjct: 317 DSPKLPTSDSPGMVELKAPQNSGPKESNAPPPSARIAGPPALPGRPSQLATATLRAPQRH 376

Query: 72  QDSGTEELMIVLEQGTEVRLSL 93
                   +IV+E+  E  ++L
Sbjct: 377 SRGEGVNTIIVVERVKETGVTL 398


>gi|237681119 breast cancer 1, early onset isoform 2 [Homo sapiens]
          Length = 1884

 Score = 31.2 bits (69), Expect = 1.0
 Identities = 26/92 (28%), Positives = 41/92 (44%), Gaps = 1/92 (1%)

Query: 3   GYRRLRSPRDSQTEPQNDNEGETSLATTQMNPPKRRQVEQGPSTGAKKPSISGAPHLNSY 62
           GYR  R+ R  Q+EP+N +  ETSL+    N    R +        +K S+      +S 
Sbjct: 129 GYRN-RAKRLLQSEPENPSLQETSLSVQLSNLGTVRTLRTKQRIQPQKTSVYIELGSDSS 187

Query: 63  QSLELPQNQQDSGTEELMIVLEQGTEVRLSLE 94
           +           G +EL+ +  QGT   +SL+
Sbjct: 188 EDTVNKATYCSVGDQELLQITPQGTRDEISLD 219


>gi|237681125 breast cancer 1, early onset isoform 5 [Homo sapiens]
          Length = 699

 Score = 31.2 bits (69), Expect = 1.0
 Identities = 26/92 (28%), Positives = 41/92 (44%), Gaps = 1/92 (1%)

Query: 3   GYRRLRSPRDSQTEPQNDNEGETSLATTQMNPPKRRQVEQGPSTGAKKPSISGAPHLNSY 62
           GYR  R+ R  Q+EP+N +  ETSL+    N    R +        +K S+      +S 
Sbjct: 129 GYRN-RAKRLLQSEPENPSLQETSLSVQLSNLGTVRTLRTKQRIQPQKTSVYIELGSDSS 187

Query: 63  QSLELPQNQQDSGTEELMIVLEQGTEVRLSLE 94
           +           G +EL+ +  QGT   +SL+
Sbjct: 188 EDTVNKATYCSVGDQELLQITPQGTRDEISLD 219


>gi|237681123 breast cancer 1, early onset isoform 4 [Homo sapiens]
          Length = 759

 Score = 31.2 bits (69), Expect = 1.0
 Identities = 26/92 (28%), Positives = 41/92 (44%), Gaps = 1/92 (1%)

Query: 3   GYRRLRSPRDSQTEPQNDNEGETSLATTQMNPPKRRQVEQGPSTGAKKPSISGAPHLNSY 62
           GYR  R+ R  Q+EP+N +  ETSL+    N    R +        +K S+      +S 
Sbjct: 129 GYRN-RAKRLLQSEPENPSLQETSLSVQLSNLGTVRTLRTKQRIQPQKTSVYIELGSDSS 187

Query: 63  QSLELPQNQQDSGTEELMIVLEQGTEVRLSLE 94
           +           G +EL+ +  QGT   +SL+
Sbjct: 188 EDTVNKATYCSVGDQELLQITPQGTRDEISLD 219


>gi|237681121 breast cancer 1, early onset isoform 3 [Homo sapiens]
          Length = 1816

 Score = 31.2 bits (69), Expect = 1.0
 Identities = 26/92 (28%), Positives = 41/92 (44%), Gaps = 1/92 (1%)

Query: 3   GYRRLRSPRDSQTEPQNDNEGETSLATTQMNPPKRRQVEQGPSTGAKKPSISGAPHLNSY 62
           GYR  R+ R  Q+EP+N +  ETSL+    N    R +        +K S+      +S 
Sbjct: 82  GYRN-RAKRLLQSEPENPSLQETSLSVQLSNLGTVRTLRTKQRIQPQKTSVYIELGSDSS 140

Query: 63  QSLELPQNQQDSGTEELMIVLEQGTEVRLSLE 94
           +           G +EL+ +  QGT   +SL+
Sbjct: 141 EDTVNKATYCSVGDQELLQITPQGTRDEISLD 172


>gi|6552299 breast cancer 1, early onset isoform 1 [Homo sapiens]
          Length = 1863

 Score = 31.2 bits (69), Expect = 1.0
 Identities = 26/92 (28%), Positives = 41/92 (44%), Gaps = 1/92 (1%)

Query: 3   GYRRLRSPRDSQTEPQNDNEGETSLATTQMNPPKRRQVEQGPSTGAKKPSISGAPHLNSY 62
           GYR  R+ R  Q+EP+N +  ETSL+    N    R +        +K S+      +S 
Sbjct: 129 GYRN-RAKRLLQSEPENPSLQETSLSVQLSNLGTVRTLRTKQRIQPQKTSVYIELGSDSS 187

Query: 63  QSLELPQNQQDSGTEELMIVLEQGTEVRLSLE 94
           +           G +EL+ +  QGT   +SL+
Sbjct: 188 EDTVNKATYCSVGDQELLQITPQGTRDEISLD 219


>gi|226528146 HRAS-like suppressor family, member 5 isoform 3
          [Homo sapiens]
          Length = 253

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 29/91 (31%), Positives = 40/91 (43%), Gaps = 18/91 (19%)

Query: 22 EGETSLATTQMNPPKRRQVEQGPSTGAKK--PSI--SGAPH--LNSYQSLEL-------- 67
          EGE +L   ++ PP  +   +   TG K   P++  S  PH  LNS   LEL        
Sbjct: 8  EGEYALRLPRIPPPLPKPASRTAGTGPKDQPPALRRSAVPHSGLNSISPLELEESVGFAA 67

Query: 68 ----PQNQQDSGTEELMIVLEQGTEVRLSLE 94
              P  Q   GT E    ++QG +  +SLE
Sbjct: 68 LVQLPAKQPPPGTLEQGRSIQQGEKAVVSLE 98


>gi|16905367 HRAS-like suppressor family, member 5 isoform 1 [Homo
          sapiens]
          Length = 279

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 29/91 (31%), Positives = 40/91 (43%), Gaps = 18/91 (19%)

Query: 22 EGETSLATTQMNPPKRRQVEQGPSTGAKK--PSI--SGAPH--LNSYQSLEL-------- 67
          EGE +L   ++ PP  +   +   TG K   P++  S  PH  LNS   LEL        
Sbjct: 8  EGEYALRLPRIPPPLPKPASRTAGTGPKDQPPALRRSAVPHSGLNSISPLELEESVGFAA 67

Query: 68 ----PQNQQDSGTEELMIVLEQGTEVRLSLE 94
              P  Q   GT E    ++QG +  +SLE
Sbjct: 68 LVQLPAKQPPPGTLEQGRSIQQGEKAVVSLE 98


>gi|14589951 DNA directed RNA polymerase II polypeptide E [Homo
           sapiens]
          Length = 210

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 17/65 (26%), Positives = 38/65 (58%), Gaps = 8/65 (12%)

Query: 69  QNQQDSGTEELMIVLEQGTEVRLSLEEVILILAPETVLQLTLENTVLV------IVPEHV 122
           Q  Q+      +IV++QG  +  S ++ ++ +AP+ +L+  L+  +L+      +VPEHV
Sbjct: 92  QRMQEENITRALIVVQQG--MTPSAKQSLVDMAPKYILEQFLQQELLINITEHELVPEHV 149

Query: 123 LRSED 127
           + +++
Sbjct: 150 VMTKE 154


>gi|156119601 spermatogenesis and oogenesis specific basic
           helix-loop-helix 1 isoform b [Homo sapiens]
          Length = 328

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 34/118 (28%), Positives = 51/118 (43%), Gaps = 19/118 (16%)

Query: 34  PPKRRQVEQGPSTGAKKPSISGAPHLN----SYQSLELPQNQQDSGTEELMIVLEQGTE- 88
           PPK   V +GPS+  ++  IS          S + L     Q D   E++  VLE   + 
Sbjct: 41  PPKAPTVAEGPSSCLRRNVISERERRKRMSLSCERLRALLPQFDGRREDMASVLEMSVQF 100

Query: 89  VRLSL-----EEVILILAP---------ETVLQLTLENTVLVIVPEHVLRSEDGLQSP 132
           +RL+      +E   ILA          E VLQLTL + +   VP+    +  G ++P
Sbjct: 101 LRLASALGPSQEQHAILASSKEMWHSLQEDVLQLTLSSQIQAGVPDPGTGASSGTRTP 158


>gi|156119603 spermatogenesis and oogenesis specific basic
           helix-loop-helix 1 isoform a [Homo sapiens]
          Length = 387

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 34/118 (28%), Positives = 51/118 (43%), Gaps = 19/118 (16%)

Query: 34  PPKRRQVEQGPSTGAKKPSISGAPHLN----SYQSLELPQNQQDSGTEELMIVLEQGTE- 88
           PPK   V +GPS+  ++  IS          S + L     Q D   E++  VLE   + 
Sbjct: 41  PPKAPTVAEGPSSCLRRNVISERERRKRMSLSCERLRALLPQFDGRREDMASVLEMSVQF 100

Query: 89  VRLSL-----EEVILILAP---------ETVLQLTLENTVLVIVPEHVLRSEDGLQSP 132
           +RL+      +E   ILA          E VLQLTL + +   VP+    +  G ++P
Sbjct: 101 LRLASALGPSQEQHAILASSKEMWHSLQEDVLQLTLSSQIQAGVPDPGTGASSGTRTP 158


>gi|226491950 HRAS-like suppressor family, member 5 isoform 2
          [Homo sapiens]
          Length = 269

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 8/81 (9%)

Query: 22 EGETSLATTQMNPPKRRQVEQGPSTGAKK--PSI--SGAPHLNSYQS----LELPQNQQD 73
          EGE +L   ++ PP  +   +   TG K   P++  S  PH          ++LP  Q  
Sbjct: 8  EGEYALRLPRIPPPLPKPASRTAGTGPKDQPPALRRSAVPHSEESVGFAALVQLPAKQPP 67

Query: 74 SGTEELMIVLEQGTEVRLSLE 94
           GT E    ++QG +  +SLE
Sbjct: 68 PGTLEQGRSIQQGEKAVVSLE 88


>gi|21735552 mitogen-activated protein kinase kinase kinase 12 [Homo
           sapiens]
          Length = 859

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 25/91 (27%), Positives = 37/91 (40%), Gaps = 13/91 (14%)

Query: 13  SQTEPQNDNEGETSLATTQMNPPKRRQVEQGPSTGAKKPSISGAPHLNSYQSLELPQNQQ 72
           SQ  PQ+ N  ++    +  NP        G    A +PS SG P + S  + E P  + 
Sbjct: 735 SQRWPQSLNMRQSLSTFSSENP------SDGEEGTASEPSPSGTPEVGSTNTDERPDERS 788

Query: 73  DSGTEELMIVLEQGTEVRLSLEEVILILAPE 103
           D        +  QG+E+ L      +I  PE
Sbjct: 789 DD-------MCSQGSEIPLDPPPSEVIPGPE 812


>gi|21493022 A kinase (PRKA) anchor protein 12 isoform 1 [Homo
           sapiens]
          Length = 1782

 Score = 28.9 bits (63), Expect = 5.2
 Identities = 16/72 (22%), Positives = 38/72 (52%), Gaps = 9/72 (12%)

Query: 9   SPRDSQTEPQN---DNEGETSLATTQMNPPKRRQVEQGPSTGAKKPSISGAPHLNSYQSL 65
           S +  + EP+    + +G+  +A+ ++   ++   ++ P+  A +P +S       Y+ +
Sbjct: 324 SEKKKEQEPEKVDTEEDGKAEVASEKLTASEQAHPQE-PAESAHEPRLSA-----EYEKV 377

Query: 66  ELPQNQQDSGTE 77
           ELP  +Q SG++
Sbjct: 378 ELPSEEQVSGSQ 389


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.134    0.388 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,462,015
Number of Sequences: 37866
Number of extensions: 546721
Number of successful extensions: 1766
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 1730
Number of HSP's gapped (non-prelim): 42
length of query: 277
length of database: 18,247,518
effective HSP length: 101
effective length of query: 176
effective length of database: 14,423,052
effective search space: 2538457152
effective search space used: 2538457152
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.