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Name: PTPN20A Sequence: fasta or formatted (226aa) NCBI GI: 109138559
Description:

protein tyrosine phosphatase, non-receptor type 20A isoform 2

Referenced in:

Protein Tyrosine Phosphatases

Other entries for this name:
alt prot [420aa] protein tyrosine phosphatase, non-receptor type 20A isoform 1
alt prot [411aa] protein tyrosine phosphatase, non-receptor type 20A isoform 3
alt prot [269aa] protein tyrosine phosphatase, non-receptor type 20A isoform 4
alt prot [228aa] protein tyrosine phosphatase, non-receptor type 20A isoform 5
alt prot [217aa] protein tyrosine phosphatase, non-receptor type 20A isoform 6
alt prot [136aa] protein tyrosine phosphatase, non-receptor type 20A isoform 7
alt prot [145aa] protein tyrosine phosphatase, non-receptor type 20A isoform 9
alt prot [339aa] protein tyrosine phosphatase, non-receptor type 20A isoform 8
alt prot [64aa] protein tyrosine phosphatase, non-receptor type 20A isoform 10
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.8         13           2
 C cysteine            0.9          2           1
 D aspartate           6.2         14           1
 E glutamate          11.5         26           2
 F phenylalanine       5.3         12           1
 G glycine             4.9         11           1
 H histidine           2.2          5           2
 I isoleucine          3.1          7           1
 K lysine              4.4         10           1
 L leucine             8.4         19           3
 M methionine          1.8          4           1
 N asparagine          7.1         16           1
 P proline             6.6         15           1
 Q glutamine           3.5          8           1
 R arginine            7.1         16           2
 S serine             10.6         24           3
 T threonine           3.5          8           2
 V valine              3.1          7           1
 W tryptophan          1.3          3           1
 Y tyrosine            2.7          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protein tyrosine phosphatase, non-receptor type 20A... 
PTPN20B               1.000   protein tyrosine phosphatase, non-receptor type 20 i...
PTPN20A               0.948   protein tyrosine phosphatase, non-receptor type 20A...
PTPN20B               0.948   protein tyrosine phosphatase, non-receptor type 20 ...
PTPN20A               0.841   protein tyrosine phosphatase, non-receptor type 20A...
PTPN20B               0.841   protein tyrosine phosphatase, non-receptor type 20 ...
PTPN20A               0.791   protein tyrosine phosphatase, non-receptor type 20A...
PTPN20B               0.791   protein tyrosine phosphatase, non-receptor type 20 ...
PTPN20B               0.648   protein tyrosine phosphatase, non-receptor type 20 ...
PTPN20A               0.648   protein tyrosine phosphatase, non-receptor type 20A...
PTPN20A               0.627   protein tyrosine phosphatase, non-receptor type 20A...
PTPN20B               0.627   protein tyrosine phosphatase, non-receptor type 20 ...
PTPN20A               0.470   protein tyrosine phosphatase, non-receptor type 20A...
PTPN20B               0.470   protein tyrosine phosphatase, non-receptor type 20 ...
PTPN20B               0.423   protein tyrosine phosphatase, non-receptor type 20 ...
PTPN20A               0.423   protein tyrosine phosphatase, non-receptor type 20A...
PTPN20B               0.114   protein tyrosine phosphatase, non-receptor type 20 ...
PTPN20A               0.114   protein tyrosine phosphatase, non-receptor type 20A...
PTPN6                 0.032   protein tyrosine phosphatase, non-receptor type 6 is...
PTPN6                 0.032   protein tyrosine phosphatase, non-receptor type 6 is...
PTPN6                 0.032   protein tyrosine phosphatase, non-receptor type 6 is...
PTPRE                 0.030   protein tyrosine phosphatase, receptor type, E isofor...
PTPRE                 0.030   protein tyrosine phosphatase, receptor type, E isofo...
PTPN21                0.023   protein tyrosine phosphatase, non-receptor type 21 ...
LOC100131608          0.023   PREDICTED: hypothetical protein 
LOC100133251          0.023   PREDICTED: hypothetical protein 
LOC100131608          0.023   PREDICTED: hypothetical protein 
MYO5B                 0.020   myosin VB 
PTPRA                 0.016   protein tyrosine phosphatase, receptor type, A isofo...
PTPRA                 0.016   protein tyrosine phosphatase, receptor type, A isofor...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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