PHAX 34579

Name: PHAX	Sequence: fasta or formatted (394aa)		NCBI GI: 66392146
Description: RNA U, small nuclear RNA export adaptor (phosphorylation regulated)		Referenced in: Nucleus and Nucleolus
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.1 28 2 C cysteine 0.8 3 1 D aspartate 7.6 30 3 E glutamate 10.7 42 3 F phenylalanine 3.0 12 1 G glycine 6.6 26 2 H histidine 1.8 7 1 I isoleucine 4.6 18 2 K lysine 9.1 36 2 L leucine 7.6 30 2 M methionine 2.8 11 1 N asparagine 4.6 18 2 P proline 4.1 16 3 Q glutamine 5.6 22 1 R arginine 5.8 23 3 S serine 7.6 30 2 T threonine 3.8 15 1 V valine 4.3 17 2 W tryptophan 0.5 2 1 Y tyrosine 2.0 8 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 RNA U, small nuclear RNA export adaptor (phosphoryla... TPM2 0.017 tropomyosin 2 (beta) isoform 3 MYH10 0.017 myosin, heavy polypeptide 10, non-muscle TPM2 0.016 tropomyosin 2 (beta) isoform 2 SAMD4A 0.016 sterile alpha motif domain containing 4 isoform 3 [... SAMD4A 0.016 sterile alpha motif domain containing 4 isoform 2 [... SAMD4A 0.016 sterile alpha motif domain containing 4 isoform 1 [... MSN 0.013 moesin CYLC2 0.012 cylicin 2 WDR87 0.012 NYD-SP11 protein ATRX 0.012 transcriptional regulator ATRX isoform 2 ATRX 0.012 transcriptional regulator ATRX isoform 1 AKAP9 0.011 A-kinase anchor protein 9 isoform 2 AKAP9 0.011 A-kinase anchor protein 9 isoform 3 ERC1 0.011 RAB6-interacting protein 2 isoform epsilon ERC1 0.011 RAB6-interacting protein 2 isoform delta LOC100131608 0.011 PREDICTED: hypothetical protein LOC100133251 0.011 PREDICTED: hypothetical protein LOC100131608 0.011 PREDICTED: hypothetical protein LOC645202 0.009 PREDICTED: hypothetical protein LOC645202 DHX16 0.009 DEAH (Asp-Glu-Ala-His) box polypeptide 16 GOLGA5 0.009 Golgi autoantigen, golgin subfamily a, 5 CCDC147 0.009 coiled-coil domain containing 147 HDGFRP3 0.009 hepatoma-derived growth factor, related protein 3 [Ho... TAOK1 0.009 TAO kinase 1 BICD2 0.009 bicaudal D homolog 2 isoform 1 BICD2 0.009 bicaudal D homolog 2 isoform 2 AP3D1 0.009 adaptor-related protein complex 3, delta 1 subunit ... RAI14 0.009 retinoic acid induced 14 isoform d RAI14 0.009 retinoic acid induced 14 isoform c Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.