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Search of human proteins with 169168298
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169168298 PREDICTED: hypothetical protein [Homo sapiens]
(220 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169168298 PREDICTED: hypothetical protein [Homo sapiens] 462 e-131
gi|169168042 PREDICTED: hypothetical protein [Homo sapiens] 461 e-130
gi|169167510 PREDICTED: hypothetical protein [Homo sapiens] 461 e-130
gi|46409278 zinc finger protein 474 [Homo sapiens] 146 2e-35
gi|55741868 zinc finger protein 319 [Homo sapiens] 40 0.001
gi|31563521 zinc finger protein 343 [Homo sapiens] 37 0.013
gi|23308729 zinc finger protein 268 [Homo sapiens] 37 0.017
gi|133922582 zinc finger protein 358 [Homo sapiens] 37 0.017
gi|24307875 zinc finger protein 33B [Homo sapiens] 37 0.017
gi|223555989 hypothetical protein LOC51101 [Homo sapiens] 36 0.023
gi|134142822 zinc finger protein 133 [Homo sapiens] 35 0.050
gi|27545332 zinc finger protein 133 [Homo sapiens] 35 0.050
gi|190570172 zinc finger protein 180 [Homo sapiens] 34 0.086
gi|28274682 zinc finger protein 33A isoform b [Homo sapiens] 34 0.086
gi|110347446 zinc finger protein 33A isoform a [Homo sapiens] 34 0.086
gi|47271376 zinc finger protein 615 [Homo sapiens] 34 0.086
gi|55742736 zinc finger protein 700 [Homo sapiens] 33 0.15
gi|223468695 zinc finger protein 572 [Homo sapiens] 33 0.19
gi|23510457 zinc finger protein 41 [Homo sapiens] 33 0.19
gi|23510455 zinc finger protein 41 [Homo sapiens] 33 0.19
gi|34303941 zinc finger protein 567 [Homo sapiens] 33 0.19
gi|21918844 zinc finger protein 25 [Homo sapiens] 32 0.33
gi|172072608 zinc finger protein 624 [Homo sapiens] 32 0.33
gi|239747141 PREDICTED: hypothetical protein XP_002343923 [Homo ... 32 0.43
gi|14249532 zinc finger protein 587 [Homo sapiens] 32 0.43
gi|215598931 odd-skipped related 2 isoform b [Homo sapiens] 32 0.43
gi|190014599 zinc finger protein 717 [Homo sapiens] 32 0.43
gi|182509178 zinc finger and BTB domain containing 1 isoform 2 [... 32 0.43
gi|182509180 zinc finger and BTB domain containing 1 isoform 1 [... 32 0.56
gi|24307873 zinc finger protein 651 [Homo sapiens] 32 0.56
>gi|169168298 PREDICTED: hypothetical protein [Homo sapiens]
Length = 220
Score = 462 bits (1190), Expect = e-131
Identities = 220/220 (100%), Positives = 220/220 (100%)
Query: 1 MKLLSNKFLLGKTHSGKSIIRKTHEGRIFSSFQILHVYLLVVLVHLLSCADVMKTSLDLT 60
MKLLSNKFLLGKTHSGKSIIRKTHEGRIFSSFQILHVYLLVVLVHLLSCADVMKTSLDLT
Sbjct: 1 MKLLSNKFLLGKTHSGKSIIRKTHEGRIFSSFQILHVYLLVVLVHLLSCADVMKTSLDLT 60
Query: 61 NYPLMMLTAGLLISNCLCHFFIFPWCQPCLHIRAAFYDPMALTSTDHNTKPTMIRRPPAV 120
NYPLMMLTAGLLISNCLCHFFIFPWCQPCLHIRAAFYDPMALTSTDHNTKPTMIRRPPAV
Sbjct: 61 NYPLMMLTAGLLISNCLCHFFIFPWCQPCLHIRAAFYDPMALTSTDHNTKPTMIRRPPAV 120
Query: 121 VCYICGREYGTKSISIHEPQCLKKWHNENNLLPKELRRPVPKKPEVRTITAKGFYDLDAL 180
VCYICGREYGTKSISIHEPQCLKKWHNENNLLPKELRRPVPKKPEVRTITAKGFYDLDAL
Sbjct: 121 VCYICGREYGTKSISIHEPQCLKKWHNENNLLPKELRRPVPKKPEVRTITAKGFYDLDAL 180
Query: 181 NEAAWTSAHSQLVPCNVCGRTFLPDRLIVHQQSCKPKAAK 220
NEAAWTSAHSQLVPCNVCGRTFLPDRLIVHQQSCKPKAAK
Sbjct: 181 NEAAWTSAHSQLVPCNVCGRTFLPDRLIVHQQSCKPKAAK 220
>gi|169168042 PREDICTED: hypothetical protein [Homo sapiens]
Length = 220
Score = 461 bits (1186), Expect = e-130
Identities = 219/220 (99%), Positives = 220/220 (100%)
Query: 1 MKLLSNKFLLGKTHSGKSIIRKTHEGRIFSSFQILHVYLLVVLVHLLSCADVMKTSLDLT 60
MKLLSNKFLLGKTHSGKSIIRKTHEGRIFSSFQILHVYLLVVLVHLLSCADVMKTSLDLT
Sbjct: 1 MKLLSNKFLLGKTHSGKSIIRKTHEGRIFSSFQILHVYLLVVLVHLLSCADVMKTSLDLT 60
Query: 61 NYPLMMLTAGLLISNCLCHFFIFPWCQPCLHIRAAFYDPMALTSTDHNTKPTMIRRPPAV 120
NYPLMMLTAGLLISNCLCHFFIFPWCQPCLHIRAAFYDPMALTSTDHNTKPTMIRRPPAV
Sbjct: 61 NYPLMMLTAGLLISNCLCHFFIFPWCQPCLHIRAAFYDPMALTSTDHNTKPTMIRRPPAV 120
Query: 121 VCYICGREYGTKSISIHEPQCLKKWHNENNLLPKELRRPVPKKPEVRTITAKGFYDLDAL 180
VCYICGREYGTKSISIHEPQCLKKWHNENNLLPKELRRPVPKKPEVRTITAKGFYDLDAL
Sbjct: 121 VCYICGREYGTKSISIHEPQCLKKWHNENNLLPKELRRPVPKKPEVRTITAKGFYDLDAL 180
Query: 181 NEAAWTSAHSQLVPCNVCGRTFLPDRLIVHQQSCKPKAAK 220
NEAAWTSAHSQLVPCNVCGRTFLPDRLIVHQ+SCKPKAAK
Sbjct: 181 NEAAWTSAHSQLVPCNVCGRTFLPDRLIVHQRSCKPKAAK 220
>gi|169167510 PREDICTED: hypothetical protein [Homo sapiens]
Length = 220
Score = 461 bits (1186), Expect = e-130
Identities = 219/220 (99%), Positives = 220/220 (100%)
Query: 1 MKLLSNKFLLGKTHSGKSIIRKTHEGRIFSSFQILHVYLLVVLVHLLSCADVMKTSLDLT 60
MKLLSNKFLLGKTHSGKSIIRKTHEGRIFSSFQILHVYLLVVLVHLLSCADVMKTSLDLT
Sbjct: 1 MKLLSNKFLLGKTHSGKSIIRKTHEGRIFSSFQILHVYLLVVLVHLLSCADVMKTSLDLT 60
Query: 61 NYPLMMLTAGLLISNCLCHFFIFPWCQPCLHIRAAFYDPMALTSTDHNTKPTMIRRPPAV 120
NYPLMMLTAGLLISNCLCHFFIFPWCQPCLHIRAAFYDPMALTSTDHNTKPTMIRRPPAV
Sbjct: 61 NYPLMMLTAGLLISNCLCHFFIFPWCQPCLHIRAAFYDPMALTSTDHNTKPTMIRRPPAV 120
Query: 121 VCYICGREYGTKSISIHEPQCLKKWHNENNLLPKELRRPVPKKPEVRTITAKGFYDLDAL 180
VCYICGREYGTKSISIHEPQCLKKWHNENNLLPKELRRPVPKKPEVRTITAKGFYDLDAL
Sbjct: 121 VCYICGREYGTKSISIHEPQCLKKWHNENNLLPKELRRPVPKKPEVRTITAKGFYDLDAL 180
Query: 181 NEAAWTSAHSQLVPCNVCGRTFLPDRLIVHQQSCKPKAAK 220
NEAAWTSAHSQLVPCNVCGRTFLPDRLIVHQ+SCKPKAAK
Sbjct: 181 NEAAWTSAHSQLVPCNVCGRTFLPDRLIVHQRSCKPKAAK 220
>gi|46409278 zinc finger protein 474 [Homo sapiens]
Length = 364
Score = 146 bits (368), Expect = 2e-35
Identities = 66/103 (64%), Positives = 82/103 (79%), Gaps = 2/103 (1%)
Query: 115 RRPPAVVCYICGREYGTKSISIHEPQCLKKWHNENNLLPKELRRPVPKKPEVRTITAKGF 174
RRP VCYICGRE+G++SI+IHEPQCL+KWH EN+ LPK LRRP P KP+ ++++ G
Sbjct: 90 RRPGFRVCYICGREFGSQSIAIHEPQCLQKWHIENSKLPKHLRRPEPSKPQ--SLSSSGS 147
Query: 175 YDLDALNEAAWTSAHSQLVPCNVCGRTFLPDRLIVHQQSCKPK 217
Y L A NEAA+ SA +QL+PC CGRTFLPD L+VH +SCKPK
Sbjct: 148 YSLQATNEAAFQSAQAQLLPCESCGRTFLPDHLLVHHRSCKPK 190
Score = 97.4 bits (241), Expect = 8e-21
Identities = 47/100 (47%), Positives = 62/100 (62%), Gaps = 10/100 (10%)
Query: 116 RPPAVVCYICGREYGTKSISIHEPQCLKKWHNENNLLPKELRRPVPKKPEVRTITAKGFY 175
RP V+CYICG+E+GT S+ IHEP+CL+KW EN+ LP EL +P+P+KP+
Sbjct: 218 RPRTVICYICGKEFGTLSLPIHEPKCLEKWKMENDRLPVELHQPLPQKPQ---------- 267
Query: 176 DLDALNEAAWTSAHSQLVPCNVCGRTFLPDRLIVHQQSCK 215
L + +QLV C C R F DRL+VHQ+SCK
Sbjct: 268 PLPNAQSSQAGPNQAQLVFCPHCSRIFTSDRLLVHQRSCK 307
>gi|55741868 zinc finger protein 319 [Homo sapiens]
Length = 582
Score = 40.4 bits (93), Expect = 0.001
Identities = 33/107 (30%), Positives = 47/107 (43%), Gaps = 17/107 (15%)
Query: 111 PTMIRRPPAVVCYICGREYGTKSISIHE-------------PQCLKKWHNENNLLPKELR 157
P P C +CG + S S HE QCLK +H +LL +
Sbjct: 67 PLQAAGEPGPKCGVCGHDLAHLS-SPHEHQCLAGHDRSFQCTQCLKIFHQATDLLEHQCV 125
Query: 158 RPVPKKPEVRTITAKGFYDLDALNEAAWTSAHSQLVPCNVCGRTFLP 204
+ +KP V + GF L +L A S+HS LV C++C +T+ P
Sbjct: 126 Q-AEQKPFVCGVCKMGFSLLTSL--AQHHSSHSGLVKCSICEKTYKP 169
>gi|31563521 zinc finger protein 343 [Homo sapiens]
Length = 599
Score = 37.0 bits (84), Expect = 0.013
Identities = 29/125 (23%), Positives = 49/125 (39%), Gaps = 19/125 (15%)
Query: 106 DHNTKPTMIRRPPAV------VCYICGREYGTKSI--------SIHEP----QCLKKWHN 147
DHN + I P + +C CGR + +S S+ +P +C + +
Sbjct: 249 DHNLESNFITNPRTLLGKKPYICSDCGRSFKDRSTLIRHHRIHSMEKPYVCSECGRGFSQ 308
Query: 148 ENNLLPKELRRPVPKKPEVRTITAKGFYDLDALNEAAWTSAHSQLVPCNVCGRTFLPDRL 207
++N L + R +KP + + F LN WT + + C+ CGR F
Sbjct: 309 KSN-LSRHQRTHSEEKPYLCRECGQSFRSKSILNRHQWTHSEEKPYVCSECGRGFSEKSS 367
Query: 208 IVHQQ 212
+ Q
Sbjct: 368 FIRHQ 372
Score = 33.5 bits (75), Expect = 0.15
Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 14/106 (13%)
Query: 121 VCYICGREYGTKSIS-IHEP-----------QCLKKWHNENNLLPKELRRPVPKKPEVRT 168
VC CGR + KS+ +H+ +C + + ++NL+ + R +KP +
Sbjct: 466 VCGECGRGFSRKSLLLVHQRTHSGEKHYVCRECRRGFSQKSNLI-RHQRTHSNEKPYICR 524
Query: 169 ITAKGFYDLDALNEAAWTSAHSQLVPCNVCGRTF-LPDRLIVHQQS 213
+GF D L T + + C+ CGR F L+VHQ++
Sbjct: 525 ECGRGFCDKSTLIVHERTHSGEKPYVCSECGRGFSRKSLLLVHQRT 570
Score = 33.1 bits (74), Expect = 0.19
Identities = 31/105 (29%), Positives = 46/105 (43%), Gaps = 12/105 (11%)
Query: 121 VCYICGREYGTKSI-----SIHEPQ----CLK--KWHNENNLLPKELRRPVPKKPEVRTI 169
VC CGR + KS IH + C + + ++N+ L K R + +KP V
Sbjct: 382 VCLECGRSFCDKSTLRKHQRIHSGEKPYVCRECGRGFSQNSDLIKHQRTHLDEKPYVCRE 441
Query: 170 TAKGFYDLDALNEAAWTSAHSQLVPCNVCGRTF-LPDRLIVHQQS 213
+GF D L T + + C CGR F L+VHQ++
Sbjct: 442 CGRGFCDKSTLIIHERTHSGEKPYVCGECGRGFSRKSLLLVHQRT 486
>gi|23308729 zinc finger protein 268 [Homo sapiens]
Length = 947
Score = 36.6 bits (83), Expect = 0.017
Identities = 34/108 (31%), Positives = 51/108 (47%), Gaps = 18/108 (16%)
Query: 121 VCYICGREYGTKS-ISIHE-----------PQCLKKWHNENNLLPKELRRPVPKKPEVRT 168
VC CG+ +G KS + IHE +C K ++ ++NL+ + R +KP V +
Sbjct: 389 VCNECGKAFGLKSQLIIHERIHTGEKPYECNECQKAFNTKSNLMVHQ-RTHTGEKPYVCS 447
Query: 169 ITAKGFYDLDALNEAAWTSAHSQLVP--CNVCGRTF-LPDRLIVHQQS 213
K F L H+ + P C CG+ F L +LIVHQ+S
Sbjct: 448 DCGKAFTFKSQL--IVHQGIHTGVKPYGCIQCGKGFSLKSQLIVHQRS 493
Score = 31.2 bits (69), Expect = 0.73
Identities = 29/105 (27%), Positives = 44/105 (41%), Gaps = 14/105 (13%)
Query: 121 VCYICGREYGTKS-ISIHEP-----------QCLKKWHNENNLLPKELRRPVPKKPEVRT 168
VC CG+ + KS + +H+ QC K + ++ L+ + R KP V
Sbjct: 445 VCSDCGKAFTFKSQLIVHQGIHTGVKPYGCIQCGKGFSLKSQLIVHQ-RSHTGMKPYVCN 503
Query: 169 ITAKGFYDLDALNEAAWTSAHSQLVPCNVCGRTF-LPDRLIVHQQ 212
K F L T +L CN CG+ F +LI+HQ+
Sbjct: 504 ECGKAFRSKSYLIIHTRTHTGEKLHECNNCGKAFSFKSQLIIHQR 548
>gi|133922582 zinc finger protein 358 [Homo sapiens]
Length = 568
Score = 36.6 bits (83), Expect = 0.017
Identities = 29/105 (27%), Positives = 44/105 (41%), Gaps = 14/105 (13%)
Query: 122 CYICGREYGTKSISI------------HEPQCLKKWHNENNLLPKELRRPVPKKPEVRTI 169
C CG+ +G +S + H P C K + +LL + LR +P +
Sbjct: 209 CAACGKAFGWRSTLLKHRSSHSGEKPHHCPVCGKAF-GHGSLLAQHLRTHGGPRPHKCPV 267
Query: 170 TAKGFYDLDALNEAAWTSAHSQLVPCNVCGRTF-LPDRLIVHQQS 213
AKGF AL + T + PC CG+ F L+ HQ++
Sbjct: 268 CAKGFGQGSALLKHLRTHTGERPYPCPQCGKAFGQSSALLQHQRT 312
>gi|24307875 zinc finger protein 33B [Homo sapiens]
Length = 778
Score = 36.6 bits (83), Expect = 0.017
Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 14/104 (13%)
Query: 122 CYICGREYGTKS-ISIHE-----------PQCLKKWHNENNLLPKELRRPVPKKPEVRTI 169
CY CG+ + KS ++IH+ P+C K+ + + L + R +KP
Sbjct: 527 CYECGKTFCLKSDLTIHQRTHTGEKPFACPEC-GKFFSHKSTLSQHYRTHTGEKPYECHE 585
Query: 170 TAKGFYDLDALNEAAWTSAHSQLVPCNVCGRTFL-PDRLIVHQQ 212
K FY+ L + T + CN CG+TF +L HQ+
Sbjct: 586 CGKIFYNKSYLTKHNRTHTGEKPYECNECGKTFCQKSQLTQHQR 629
Score = 29.6 bits (65), Expect = 2.1
Identities = 26/93 (27%), Positives = 37/93 (39%), Gaps = 13/93 (13%)
Query: 122 CYICGREYGTKS-ISIHEP-----------QCLKKWHNENNLLPKELRRPVPKKPEVRTI 169
C CG+ + KS ++ H+ QC K + ++NL K R +KP
Sbjct: 331 CNECGKAFWEKSHLTRHQRVHTGEKHFQCNQCGKTFWEKSNLT-KHQRSHTGEKPFECNE 389
Query: 170 TAKGFYDLDALNEAAWTSAHSQLVPCNVCGRTF 202
K F AL T + CN CG+TF
Sbjct: 390 CGKAFSHKSALTLHQRTHTGEKPYQCNACGKTF 422
>gi|223555989 hypothetical protein LOC51101 [Homo sapiens]
Length = 325
Score = 36.2 bits (82), Expect = 0.023
Identities = 16/44 (36%), Positives = 22/44 (50%)
Query: 177 LDALNEAAWTSAHSQLVPCNVCGRTFLPDRLIVHQQSCKPKAAK 220
++ L E +L+PC +CGRTF P L H C+ A K
Sbjct: 1 MEGLEENGGVVQVGELLPCKICGRTFFPVALKKHGPICQKTATK 44
>gi|134142822 zinc finger protein 133 [Homo sapiens]
Length = 653
Score = 35.0 bits (79), Expect = 0.050
Identities = 34/117 (29%), Positives = 51/117 (43%), Gaps = 17/117 (14%)
Query: 120 VVCYICGREYGTKS-ISIHE-----------PQCLKKWHNENNLLPKELRRPVPKKPEVR 167
+VC CGR + KS + IHE +C + + ++NL+ + R +KP V
Sbjct: 269 IVCRECGRGFNRKSTLIIHERTHSGEKPYMCSECGRGFSQKSNLIIHQ-RTHSGEKPYVC 327
Query: 168 TITAKGFYDLDALNEAAWTSAHSQLVPCNVCGRTFLP-DRLIVHQQSC---KPKAAK 220
KGF A+ T + + C+ CG F LI HQ++ KP A K
Sbjct: 328 RECGKGFSQKSAVVRHQRTHLEEKTIVCSDCGLGFSDRSNLISHQRTHSGEKPYACK 384
Score = 28.1 bits (61), Expect = 6.1
Identities = 23/94 (24%), Positives = 36/94 (38%), Gaps = 18/94 (19%)
Query: 121 VCYICGREYGTKSISIHEPQCLKKWHNENNLLPKELRRPVPKKPEVRTITAKGFYDLDAL 180
VC +CG + ++N+ L R +KP V + +GF L
Sbjct: 410 VCGVCGHSF-----------------SQNSTLISHRRTHTGEKPYVCGVCGRGFSLKSHL 452
Query: 181 NEAAWTSAHSQLVPCNVCGRTF-LPDRLIVHQQS 213
N + + + C CGR F LI HQ++
Sbjct: 453 NRHQNIHSGEKPIVCKDCGRGFSQQSNLIRHQRT 486
>gi|27545332 zinc finger protein 133 [Homo sapiens]
Length = 653
Score = 35.0 bits (79), Expect = 0.050
Identities = 34/117 (29%), Positives = 51/117 (43%), Gaps = 17/117 (14%)
Query: 120 VVCYICGREYGTKS-ISIHE-----------PQCLKKWHNENNLLPKELRRPVPKKPEVR 167
+VC CGR + KS + IHE +C + + ++NL+ + R +KP V
Sbjct: 269 IVCRECGRGFNRKSTLIIHERTHSGEKPYMCSECGRGFSQKSNLIIHQ-RTHSGEKPYVC 327
Query: 168 TITAKGFYDLDALNEAAWTSAHSQLVPCNVCGRTFLP-DRLIVHQQSC---KPKAAK 220
KGF A+ T + + C+ CG F LI HQ++ KP A K
Sbjct: 328 RECGKGFSQKSAVVRHQRTHLEEKTIVCSDCGLGFSDRSNLISHQRTHSGEKPYACK 384
Score = 28.1 bits (61), Expect = 6.1
Identities = 23/94 (24%), Positives = 36/94 (38%), Gaps = 18/94 (19%)
Query: 121 VCYICGREYGTKSISIHEPQCLKKWHNENNLLPKELRRPVPKKPEVRTITAKGFYDLDAL 180
VC +CG + ++N+ L R +KP V + +GF L
Sbjct: 410 VCGVCGHSF-----------------SQNSTLISHRRTHTGEKPYVCGVCGRGFSLKSHL 452
Query: 181 NEAAWTSAHSQLVPCNVCGRTF-LPDRLIVHQQS 213
N + + + C CGR F LI HQ++
Sbjct: 453 NRHQNIHSGEKPIVCKDCGRGFSQQSNLIRHQRT 486
>gi|190570172 zinc finger protein 180 [Homo sapiens]
Length = 692
Score = 34.3 bits (77), Expect = 0.086
Identities = 29/105 (27%), Positives = 46/105 (43%), Gaps = 14/105 (13%)
Query: 122 CYICGREYGTKS-ISIHEP-----------QCLKKWHNENNLLPKELRRPVPKKPEVRTI 169
C CG+ + S + +H+ QC K + +++ +L R +KP +
Sbjct: 551 CSECGKSFNRSSHLVMHQRIHTGEKPYECNQCGKSF-SQSYVLVVHQRTHTGEKPYECSQ 609
Query: 170 TAKGFYDLDALNEAAWTSAHSQLVPCNVCGRTF-LPDRLIVHQQS 213
K F L + T + CN CG+TF L RLIVHQ++
Sbjct: 610 CGKSFRQSSCLTQHQRTHTGEKPFECNQCGKTFSLSARLIVHQRT 654
>gi|28274682 zinc finger protein 33A isoform b [Homo sapiens]
Length = 810
Score = 34.3 bits (77), Expect = 0.086
Identities = 27/104 (25%), Positives = 45/104 (43%), Gaps = 14/104 (13%)
Query: 122 CYICGREYGTKS-ISIHE-----------PQCLKKWHNENNLLPKELRRPVPKKPEVRTI 169
CY CG+ + KS +++H+ P+C K+ + + L + R +KP
Sbjct: 526 CYECGKTFCLKSDLTVHQRTHTGQKPFACPEC-GKFFSHKSTLSQHYRTHTGEKPYECHE 584
Query: 170 TAKGFYDLDALNEAAWTSAHSQLVPCNVCGRTFL-PDRLIVHQQ 212
K FY+ L + T + CN CG+ F +L HQ+
Sbjct: 585 CGKIFYNKSYLTKHNRTHTGEKPYECNECGKAFYQKSQLTQHQR 628
Score = 29.3 bits (64), Expect = 2.8
Identities = 25/93 (26%), Positives = 38/93 (40%), Gaps = 13/93 (13%)
Query: 122 CYICGREYGTKS-ISIHEP-----------QCLKKWHNENNLLPKELRRPVPKKPEVRTI 169
C CG+ + KS ++ H+ +C K + +++NL K R +KP
Sbjct: 330 CNECGKAFWEKSHLTRHQRVHTGQKPFQCNECEKAFWDKSNLT-KHQRSHTGEKPFECNE 388
Query: 170 TAKGFYDLDALNEAAWTSAHSQLVPCNVCGRTF 202
K F AL T + CN CG+TF
Sbjct: 389 CGKAFSHKSALTLHQRTHTGEKPYQCNACGKTF 421
>gi|110347446 zinc finger protein 33A isoform a [Homo sapiens]
Length = 811
Score = 34.3 bits (77), Expect = 0.086
Identities = 27/104 (25%), Positives = 45/104 (43%), Gaps = 14/104 (13%)
Query: 122 CYICGREYGTKS-ISIHE-----------PQCLKKWHNENNLLPKELRRPVPKKPEVRTI 169
CY CG+ + KS +++H+ P+C K+ + + L + R +KP
Sbjct: 527 CYECGKTFCLKSDLTVHQRTHTGQKPFACPEC-GKFFSHKSTLSQHYRTHTGEKPYECHE 585
Query: 170 TAKGFYDLDALNEAAWTSAHSQLVPCNVCGRTFL-PDRLIVHQQ 212
K FY+ L + T + CN CG+ F +L HQ+
Sbjct: 586 CGKIFYNKSYLTKHNRTHTGEKPYECNECGKAFYQKSQLTQHQR 629
Score = 29.3 bits (64), Expect = 2.8
Identities = 25/93 (26%), Positives = 38/93 (40%), Gaps = 13/93 (13%)
Query: 122 CYICGREYGTKS-ISIHEP-----------QCLKKWHNENNLLPKELRRPVPKKPEVRTI 169
C CG+ + KS ++ H+ +C K + +++NL K R +KP
Sbjct: 331 CNECGKAFWEKSHLTRHQRVHTGQKPFQCNECEKAFWDKSNLT-KHQRSHTGEKPFECNE 389
Query: 170 TAKGFYDLDALNEAAWTSAHSQLVPCNVCGRTF 202
K F AL T + CN CG+TF
Sbjct: 390 CGKAFSHKSALTLHQRTHTGEKPYQCNACGKTF 422
>gi|47271376 zinc finger protein 615 [Homo sapiens]
Length = 731
Score = 34.3 bits (77), Expect = 0.086
Identities = 27/94 (28%), Positives = 41/94 (43%), Gaps = 20/94 (21%)
Query: 122 CYICGREYGTK-SISIHEPQCLKKWHNENNLLPKELRRPVPKKPEVRTITAKGFYDLDAL 180
C +CG+ + TK S++ H+ K H +KP + + KGF + L
Sbjct: 318 CSVCGKAFSTKFSLTTHQ-----KTHTG-------------EKPYICSECGKGFIEKRRL 359
Query: 181 NEAAWTSAHSQLVPCNVCGRTF-LPDRLIVHQQS 213
T + CN CG+ F L + LI HQQ+
Sbjct: 360 TAHHRTHTGEKPFICNKCGKGFTLKNSLITHQQT 393
Score = 28.1 bits (61), Expect = 6.1
Identities = 23/104 (22%), Positives = 41/104 (39%), Gaps = 13/104 (12%)
Query: 121 VCYICGREYGTKS-ISIHE-----------PQCLKKWHNENNLLPKELRRPVPKKPEVRT 168
+C CG+ + KS +++H +C K ++ L+ + R +KP +
Sbjct: 541 ICNECGKGFTEKSHLNVHRRTHTGEKPYVCSECGKDLTGKSMLIAHQ-RTHTGEKPYICN 599
Query: 169 ITAKGFYDLDALNEAAWTSAHSQLVPCNVCGRTFLPDRLIVHQQ 212
KGF L+ T + CN C +TF ++ Q
Sbjct: 600 ECGKGFTMKSTLSIHQQTHTGEKPYKCNECDKTFRKKTCLIQHQ 643
>gi|55742736 zinc finger protein 700 [Homo sapiens]
Length = 742
Score = 33.5 bits (75), Expect = 0.15
Identities = 22/82 (26%), Positives = 32/82 (39%), Gaps = 13/82 (15%)
Query: 122 CYICGREYG-TKSISIHEPQCLKKWHNENNLLPKELRRPVPKKPEVRTITAKGFYDLDAL 180
C CG+ + K + IHE K +R P ++P +I KGFY +
Sbjct: 476 CKECGKAFRYVKHLQIHERT------------EKHIRMPSGERPYKCSICEKGFYSAKSF 523
Query: 181 NEAAWTSAHSQLVPCNVCGRTF 202
T + CN CG+ F
Sbjct: 524 QTHEKTHTGEKPYECNQCGKAF 545
>gi|223468695 zinc finger protein 572 [Homo sapiens]
Length = 529
Score = 33.1 bits (74), Expect = 0.19
Identities = 25/103 (24%), Positives = 43/103 (41%), Gaps = 13/103 (12%)
Query: 122 CYICGREYG-TKSISIHE-----------PQCLKKWHNENNLLPKELRRPVPKKPEVRTI 169
C CG+ + T + IHE P+C K++ + ++L+ R +KP ++
Sbjct: 190 CGECGKSFSNTSHLIIHERTHTGEKPYKCPECGKRFSSSSHLIQHH-RSHTGEKPYECSV 248
Query: 170 TAKGFYDLDALNEAAWTSAHSQLVPCNVCGRTFLPDRLIVHQQ 212
KGF L E T + C CG++F ++ Q
Sbjct: 249 CGKGFSHSYVLIEHQRTHTGEKPYKCPDCGKSFSQSSSLIRHQ 291
>gi|23510457 zinc finger protein 41 [Homo sapiens]
Length = 779
Score = 33.1 bits (74), Expect = 0.19
Identities = 27/105 (25%), Positives = 45/105 (42%), Gaps = 14/105 (13%)
Query: 122 CYICGREYGTKS-ISIHE-----------PQCLKKWHNENNLLPKELRRPVPKKPEVRTI 169
C CG+ + KS + +H+ +C K + + NL + + +KP +
Sbjct: 469 CSDCGKSFTKKSQLHVHQRIHTGEKPYICTECGKVFTHRTNLTTHQ-KTHTGEKPYMCAE 527
Query: 170 TAKGFYDLDALNEAAWTSAHSQLVPCNVCGRTFL-PDRLIVHQQS 213
K F D L + T + CN CG+ F+ RL +HQ+S
Sbjct: 528 CGKAFTDQSNLIKHQKTHTGEKPYKCNGCGKAFIWKSRLKIHQKS 572
>gi|23510455 zinc finger protein 41 [Homo sapiens]
Length = 779
Score = 33.1 bits (74), Expect = 0.19
Identities = 27/105 (25%), Positives = 45/105 (42%), Gaps = 14/105 (13%)
Query: 122 CYICGREYGTKS-ISIHE-----------PQCLKKWHNENNLLPKELRRPVPKKPEVRTI 169
C CG+ + KS + +H+ +C K + + NL + + +KP +
Sbjct: 469 CSDCGKSFTKKSQLHVHQRIHTGEKPYICTECGKVFTHRTNLTTHQ-KTHTGEKPYMCAE 527
Query: 170 TAKGFYDLDALNEAAWTSAHSQLVPCNVCGRTFL-PDRLIVHQQS 213
K F D L + T + CN CG+ F+ RL +HQ+S
Sbjct: 528 CGKAFTDQSNLIKHQKTHTGEKPYKCNGCGKAFIWKSRLKIHQKS 572
>gi|34303941 zinc finger protein 567 [Homo sapiens]
Length = 616
Score = 33.1 bits (74), Expect = 0.19
Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 14/108 (12%)
Query: 121 VCYICGREYGTKS-ISIHE-----------PQCLKKWHNENNLLPKELRRPVPKKPEVRT 168
VC CG+ + K+ +++H+ PQC K + ++ L+ + R +KP +
Sbjct: 503 VCNECGKSFRQKATLTVHQKIHTGQKSYECPQCGKAFSRKSYLIHHQ-RTHTGEKPYKCS 561
Query: 169 ITAKGFYDLDALNEAAWTSAHSQLVPCNVCGRTFLPDR-LIVHQQSCK 215
K F L T + CN CG++F R LIVHQ++ K
Sbjct: 562 ECGKCFRQKTNLIVHQRTHTGEKPYVCNECGKSFSYKRNLIVHQRTHK 609
>gi|21918844 zinc finger protein 25 [Homo sapiens]
Length = 456
Score = 32.3 bits (72), Expect = 0.33
Identities = 25/92 (27%), Positives = 39/92 (42%), Gaps = 11/92 (11%)
Query: 122 CYICGREYGTKS-ISIHEP--------QCLK--KWHNENNLLPKELRRPVPKKPEVRTIT 170
C CG+ + KS +++H+ +C + K+ + N+ L R +KP
Sbjct: 260 CKECGKAFSQKSHLTVHQRMHTGEKPYKCKECGKFFSRNSHLKTHQRSHTGEKPYECKEC 319
Query: 171 AKGFYDLDALNEAAWTSAHSQLVPCNVCGRTF 202
K FY AL T + CN CG+TF
Sbjct: 320 RKCFYQKSALTVHQRTHTGEKPFECNKCGKTF 351
Score = 28.5 bits (62), Expect = 4.7
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Query: 140 QCLKKWHNENNLLPKELRRPVPKKPEVRTITAKGFYDLDALNEAAWTSAHSQLVPCNVCG 199
+C K +++ ++L + LR +KP K FY L E T + C CG
Sbjct: 178 ECKKIFYHLSSL-SRHLRTHAGEKPYECNQCEKSFYQKPHLTEHQKTHTGEKPFECTECG 236
Query: 200 RTF-LPDRLIVHQQS 213
+ F + L+VHQ++
Sbjct: 237 KFFYVKAYLMVHQKT 251
>gi|172072608 zinc finger protein 624 [Homo sapiens]
Length = 865
Score = 32.3 bits (72), Expect = 0.33
Identities = 25/93 (26%), Positives = 37/93 (39%), Gaps = 13/93 (13%)
Query: 122 CYICGREYGTKS-ISIHE-----------PQCLKKWHNENNLLPKELRRPVPKKPEVRTI 169
CY CG+ + TKS + +H+ +C K + N + L + RR +KP
Sbjct: 642 CYDCGKSFRTKSYLIVHQRTHTGEKPYKCNECEKAFTNTSQLTVHQ-RRHTGEKPYKCNE 700
Query: 170 TAKGFYDLDALNEAAWTSAHSQLVPCNVCGRTF 202
K F N T + CN CG+ F
Sbjct: 701 CGKVFTSNSGFNTHQRTHTGEKPFKCNDCGKAF 733
>gi|239747141 PREDICTED: hypothetical protein XP_002343923 [Homo
sapiens]
Length = 904
Score = 32.0 bits (71), Expect = 0.43
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Query: 140 QCLKKWHNENNLLPKELRRPVPKKPEVRTITAKGFYDLDALNEAAWTSAHSQLVPCNVCG 199
+C K + N++NL + R +KP K F+ L WT + CN CG
Sbjct: 448 ECGKPFINKSNLRLHQ-RTHTGEKPYECNECGKTFHRKSFLTIHQWTHTGEKPYECNECG 506
Query: 200 RTF-LPDRLIVHQQS 213
+TF L VHQ++
Sbjct: 507 KTFRCKSFLTVHQRT 521
>gi|14249532 zinc finger protein 587 [Homo sapiens]
Length = 575
Score = 32.0 bits (71), Expect = 0.43
Identities = 26/110 (23%), Positives = 47/110 (42%), Gaps = 13/110 (11%)
Query: 122 CYICGREYGTK-SISIHE-----------PQCLKKWHNENNLLPKELRRPVPKKPEVRTI 169
C +CG+ +G K S++IH+ +C K + + ++ L R +KP +
Sbjct: 466 CEVCGKLFGNKHSVTIHQRIHTGERPYECSECGKSFLS-SSALHVHKRVHSGQKPYKCSE 524
Query: 170 TAKGFYDLDALNEAAWTSAHSQLVPCNVCGRTFLPDRLIVHQQSCKPKAA 219
K F + +L + + C CG+TF ++H QS + A
Sbjct: 525 CGKSFSECSSLIKHRRIHTGERPYECTKCGKTFQRSSTLLHHQSSHRRKA 574
>gi|215598931 odd-skipped related 2 isoform b [Homo sapiens]
Length = 276
Score = 32.0 bits (71), Expect = 0.43
Identities = 33/127 (25%), Positives = 48/127 (37%), Gaps = 26/127 (20%)
Query: 102 LTSTDHNTKPTMIRRPPAV----VCYICGREYGTKSISIHEPQCLKKWHNENNLLPKELR 157
L+ + KP+ R P +C CGR + TKS NLL E R
Sbjct: 150 LSKLTPDRKPSRGRLPSKTKKEFICKFCGRHF-TKSY---------------NLLIHE-R 192
Query: 158 RPVPKKPEVRTITAKGFYDLDALNEAAWTSAHSQLVPCNVCGRTFLPDRLI-----VHQQ 212
++P I K F D L + + + + C CG+ F R + +H Q
Sbjct: 193 THTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQ 252
Query: 213 SCKPKAA 219
+ P AA
Sbjct: 253 TSSPTAA 259
>gi|190014599 zinc finger protein 717 [Homo sapiens]
Length = 914
Score = 32.0 bits (71), Expect = 0.43
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Query: 140 QCLKKWHNENNLLPKELRRPVPKKPEVRTITAKGFYDLDALNEAAWTSAHSQLVPCNVCG 199
+C K + N++NL + R +KP K F+ L WT + CN CG
Sbjct: 455 ECGKPFINKSNLRLHQ-RTHTGEKPYECNECGKTFHRKSFLTIHQWTHTGEKPYECNECG 513
Query: 200 RTF-LPDRLIVHQQS 213
+TF L VHQ++
Sbjct: 514 KTFRCKSFLTVHQRT 528
>gi|182509178 zinc finger and BTB domain containing 1 isoform 2
[Homo sapiens]
Length = 644
Score = 32.0 bits (71), Expect = 0.43
Identities = 24/100 (24%), Positives = 44/100 (44%), Gaps = 4/100 (4%)
Query: 122 CYICGREYGTKSISI-HEPQCLKKWHNENNLLPKELRRPVPKKPEVRTITAKGFYDLDAL 180
C CG+ + T+++ + H CL + ++ ++ + R ++ + KGFY L
Sbjct: 536 CPNCGQRFETENLVVEHMSSCLDQDMFKSAIMEENERDH--RRKHFCNLCGKGFYQRCHL 593
Query: 181 NEAAWTSAHSQLVPCNVCGRTFLPDR-LIVHQQSCKPKAA 219
E + C CG+ FL +R L +H K A+
Sbjct: 594 REHYTVHTKEKQFVCQTCGKQFLRERQLRLHNDMHKGMAS 633
>gi|182509180 zinc finger and BTB domain containing 1 isoform 1
[Homo sapiens]
Length = 713
Score = 31.6 bits (70), Expect = 0.56
Identities = 20/86 (23%), Positives = 38/86 (44%), Gaps = 3/86 (3%)
Query: 122 CYICGREYGTKSISI-HEPQCLKKWHNENNLLPKELRRPVPKKPEVRTITAKGFYDLDAL 180
C CG+ + T+++ + H CL + ++ ++ + R ++ + KGFY L
Sbjct: 536 CPNCGQRFETENLVVEHMSSCLDQDMFKSAIMEENERDH--RRKHFCNLCGKGFYQRCHL 593
Query: 181 NEAAWTSAHSQLVPCNVCGRTFLPDR 206
E + C CG+ FL +R
Sbjct: 594 REHYTVHTKEKQFVCQTCGKQFLRER 619
>gi|24307873 zinc finger protein 651 [Homo sapiens]
Length = 371
Score = 31.6 bits (70), Expect = 0.56
Identities = 21/87 (24%), Positives = 35/87 (40%), Gaps = 5/87 (5%)
Query: 133 SISIHEPQCLKKW----HNENNLLPKELRRPVPKKPEVRTITAKGFYDLDALNEAAWTSA 188
SI I Q + +W N + ++ +KP + I K F + T
Sbjct: 220 SIHIGHKQFMCQWCGKDFNMKQYFDEHMKTHTGEKPYICEICGKSFTSRPNMKRHRRTHT 279
Query: 189 HSQLVPCNVCGRTF-LPDRLIVHQQSC 214
+ PC+VCG+ F + L H++ C
Sbjct: 280 GEKPYPCDVCGQRFRFSNMLKAHKEKC 306
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.326 0.138 0.447
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,835,234
Number of Sequences: 37866
Number of extensions: 386640
Number of successful extensions: 2475
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 94
Number of HSP's that attempted gapping in prelim test: 2198
Number of HSP's gapped (non-prelim): 353
length of query: 220
length of database: 18,247,518
effective HSP length: 98
effective length of query: 122
effective length of database: 14,536,650
effective search space: 1773471300
effective search space used: 1773471300
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.