Guide to the Human Genome
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Name: ZNF343 Sequence: fasta or formatted (599aa) NCBI GI: 31563521
Description:

zinc finger protein 343

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             2.2         13           1
 C cysteine            5.7         34           1
 D aspartate           2.2         13           1
 E glutamate           8.8         53           2
 F phenylalanine       3.8         23           1
 G glycine             7.2         43           3
 H histidine           5.8         35           2
 I isoleucine          3.3         20           2
 K lysine              7.0         42           2
 L leucine             7.3         44           3
 M methionine          1.0          6           2
 N asparagine          3.7         22           1
 P proline             5.0         30           1
 Q glutamine           5.2         31           2
 R arginine            9.0         54           2
 S serine             10.0         60           2
 T threonine           4.5         27           1
 V valine              4.0         24           2
 W tryptophan          1.0          6           1
 Y tyrosine            3.2         19           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 343 
ZNF133                0.467   zinc finger protein 133 
ZNF133                0.467   zinc finger protein 133 
PRDM9                 0.459   PR domain containing 9 
HKR1                  0.437   GLI-Kruppel family member HKR1 
ZNF337                0.421   zinc finger protein 337 
ZNF169                0.393   zinc finger protein 169 
ZNF432                0.361   zinc finger protein 432 
ZNF615                0.360   zinc finger protein 615 
LOC100287429          0.351   PREDICTED: hypothetical protein XP_002343926 isofor...
LOC100287429          0.351   PREDICTED: hypothetical protein XP_002343925 isofor...
LOC100287429          0.351   PREDICTED: hypothetical protein XP_002343927 isofor...
ZNF84                 0.351   zinc finger protein 84 
ZNF84                 0.351   zinc finger protein 84 
ZNF568                0.344   zinc finger protein 568 
ZNF41                 0.344   zinc finger protein 41 
ZNF41                 0.344   zinc finger protein 41 
ZNF613                0.341   zinc finger protein 613 isoform 1 
ZNF135                0.339   zinc finger protein 135 
ZNF569                0.337   zinc finger protein 569 
ZNF250                0.337   zinc finger protein 250 isoform b 
ZNF250                0.337   zinc finger protein 250 isoform a 
ZNF567                0.332   zinc finger protein 567 
ZNF182                0.331   zinc finger protein 21 isoform 2 
ZNF182                0.331   zinc finger protein 21 isoform 1 
ZSCAN2                0.330   zinc finger protein 29 isoform 1 
ZNF624                0.329   zinc finger protein 624 
ZNF167                0.328   zinc finger protein 167 isoform 1 
ZNF585B               0.326   zinc finger protein 585B 
ZNF300                0.325   zinc finger protein 300 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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