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Search of human proteins with 169168105
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169168105 PREDICTED: hypothetical protein [Homo sapiens]
(173 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169168105 PREDICTED: hypothetical protein [Homo sapiens] 363 e-101
gi|169167523 PREDICTED: hypothetical protein [Homo sapiens] 359 e-100
gi|169168280 PREDICTED: hypothetical protein [Homo sapiens] 258 2e-69
gi|169211844 PREDICTED: hypothetical protein [Homo sapiens] 42 3e-04
gi|239756845 PREDICTED: hypothetical protein [Homo sapiens] 40 8e-04
gi|169211031 PREDICTED: hypothetical protein [Homo sapiens] 40 8e-04
gi|239755398 PREDICTED: hypothetical protein [Homo sapiens] 37 0.011
gi|239742445 PREDICTED: hypothetical protein XP_002342517 [Homo ... 37 0.011
gi|10835246 Kruppel-like factor 1 (erythroid) [Homo sapiens] 35 0.025
gi|239749124 PREDICTED: zinc finger protein 716 [Homo sapiens] 35 0.025
gi|239757960 PREDICTED: hypothetical protein [Homo sapiens] 34 0.055
gi|239741651 PREDICTED: hypothetical protein XP_002342270 [Homo ... 34 0.055
gi|239748481 PREDICTED: hypothetical protein [Homo sapiens] 34 0.072
gi|239741505 PREDICTED: hypothetical protein XP_002342218 [Homo ... 34 0.072
gi|21735552 mitogen-activated protein kinase kinase kinase 12 [H... 33 0.094
gi|169204930 PREDICTED: hypothetical protein [Homo sapiens] 33 0.094
gi|239750393 PREDICTED: hypothetical protein [Homo sapiens] 33 0.094
gi|239744694 PREDICTED: hypothetical protein [Homo sapiens] 33 0.094
gi|122937241 SH3 and multiple ankyrin repeat domains 3 [Homo sap... 33 0.094
gi|239755589 PREDICTED: hypothetical protein [Homo sapiens] 33 0.12
gi|169160903 PREDICTED: hypothetical protein [Homo sapiens] 33 0.12
gi|169218206 PREDICTED: similar to hCG2042704 [Homo sapiens] 33 0.12
gi|219804203 rabphilin 3A homolog isoform 1 [Homo sapiens] 33 0.12
gi|45267837 rabphilin 3A homolog isoform 2 [Homo sapiens] 33 0.12
gi|14149716 protein phosphatase 1, regulatory subunit 12C [Homo ... 33 0.12
gi|155722994 zinc finger CCCH-type containing 3 [Homo sapiens] 33 0.12
gi|7662234 rab11-family interacting protein 3 isoform 1 [Homo sa... 33 0.16
gi|239744409 PREDICTED: hypothetical protein XP_002343155 [Homo ... 33 0.16
gi|120587019 zinc finger protein 318 [Homo sapiens] 33 0.16
gi|154813195 DENN/MADD domain containing 2A [Homo sapiens] 32 0.21
>gi|169168105 PREDICTED: hypothetical protein [Homo sapiens]
Length = 173
Score = 363 bits (933), Expect = e-101
Identities = 173/173 (100%), Positives = 173/173 (100%)
Query: 1 MKEVGGEEAQRQRAGEVSKETWGVAPSTLEGLESPPHPETQRPRAGAGGRRRWGATGGEG 60
MKEVGGEEAQRQRAGEVSKETWGVAPSTLEGLESPPHPETQRPRAGAGGRRRWGATGGEG
Sbjct: 1 MKEVGGEEAQRQRAGEVSKETWGVAPSTLEGLESPPHPETQRPRAGAGGRRRWGATGGEG 60
Query: 61 PRRPATRACADPGTRPFTYRWNRDAPFPGRGRFSRTRGDGKRARTEAPSGSAAEKPLPVA 120
PRRPATRACADPGTRPFTYRWNRDAPFPGRGRFSRTRGDGKRARTEAPSGSAAEKPLPVA
Sbjct: 61 PRRPATRACADPGTRPFTYRWNRDAPFPGRGRFSRTRGDGKRARTEAPSGSAAEKPLPVA 120
Query: 121 AADGRLKLQLWRGASPQVAVKCFVQTKLQRLLPNRWKQSVWTKESFFLMVLLC 173
AADGRLKLQLWRGASPQVAVKCFVQTKLQRLLPNRWKQSVWTKESFFLMVLLC
Sbjct: 121 AADGRLKLQLWRGASPQVAVKCFVQTKLQRLLPNRWKQSVWTKESFFLMVLLC 173
>gi|169167523 PREDICTED: hypothetical protein [Homo sapiens]
Length = 173
Score = 359 bits (922), Expect = e-100
Identities = 171/173 (98%), Positives = 172/173 (99%)
Query: 1 MKEVGGEEAQRQRAGEVSKETWGVAPSTLEGLESPPHPETQRPRAGAGGRRRWGATGGEG 60
MKEVGGEEAQRQRAGEVSKETWGVAPSTLEGLESPPHPETQRPRAGAGGRRRWGATGGEG
Sbjct: 1 MKEVGGEEAQRQRAGEVSKETWGVAPSTLEGLESPPHPETQRPRAGAGGRRRWGATGGEG 60
Query: 61 PRRPATRACADPGTRPFTYRWNRDAPFPGRGRFSRTRGDGKRARTEAPSGSAAEKPLPVA 120
PRRPATRACADPGTRPFTYRWNRDAPFPGRGRFSRTRGDGKRARTEAPSGSAAEKPLP A
Sbjct: 61 PRRPATRACADPGTRPFTYRWNRDAPFPGRGRFSRTRGDGKRARTEAPSGSAAEKPLPGA 120
Query: 121 AADGRLKLQLWRGASPQVAVKCFVQTKLQRLLPNRWKQSVWTKESFFLMVLLC 173
AADGRLKL+LWRGASPQVAVKCFVQTKLQRLLPNRWKQSVWTKESFFLMVLLC
Sbjct: 121 AADGRLKLRLWRGASPQVAVKCFVQTKLQRLLPNRWKQSVWTKESFFLMVLLC 173
>gi|169168280 PREDICTED: hypothetical protein [Homo sapiens]
Length = 124
Score = 258 bits (658), Expect = 2e-69
Identities = 121/123 (98%), Positives = 122/123 (99%)
Query: 51 RRWGATGGEGPRRPATRACADPGTRPFTYRWNRDAPFPGRGRFSRTRGDGKRARTEAPSG 110
RRWGATGGEGPRRPATRACADPGTRPFTYRWNRDAPFPGRGRFSRTRGDGKRARTEAPSG
Sbjct: 2 RRWGATGGEGPRRPATRACADPGTRPFTYRWNRDAPFPGRGRFSRTRGDGKRARTEAPSG 61
Query: 111 SAAEKPLPVAAADGRLKLQLWRGASPQVAVKCFVQTKLQRLLPNRWKQSVWTKESFFLMV 170
SAAEKPLP AAADGRLKL+LWRGASPQVAVKCFVQTKLQRLLPNRWKQSVWTKESFFLMV
Sbjct: 62 SAAEKPLPGAAADGRLKLRLWRGASPQVAVKCFVQTKLQRLLPNRWKQSVWTKESFFLMV 121
Query: 171 LLC 173
LLC
Sbjct: 122 LLC 124
>gi|169211844 PREDICTED: hypothetical protein [Homo sapiens]
Length = 193
Score = 42.0 bits (97), Expect = 3e-04
Identities = 44/145 (30%), Positives = 54/145 (37%), Gaps = 23/145 (15%)
Query: 5 GGEEAQRQRAGEVSKETWGVAPSTLEGLE----------SPPHPETQRPRAGAGGR--RR 52
GG AQR RAG ++ G APS G E PP PE AGGR RR
Sbjct: 46 GGRSAQR-RAGAGARRPIGAAPSVGPGGELQGWGRKSGCRPPGPE-----GWAGGRKLRR 99
Query: 53 WGATGGEGPRRPATRACADPGTRPFTYRWNRDAPFPGRGRFSRTRGDGKRARTEAPSGSA 112
W PRR + C P + R R AP P + G G+ G
Sbjct: 100 WLP-----PRRFSNFCCRSPCAQTAVRRRRRRAPSPRGAGWREGAGAGRGTPATMAGGEW 154
Query: 113 AEKPLPVAAADGRLKLQLWRGASPQ 137
A +PL + R + G P+
Sbjct: 155 AAEPLHLPQRGRRRRFTCRSGRPPR 179
>gi|239756845 PREDICTED: hypothetical protein [Homo sapiens]
Length = 257
Score = 40.4 bits (93), Expect = 8e-04
Identities = 41/125 (32%), Positives = 48/125 (38%), Gaps = 23/125 (18%)
Query: 5 GGEEAQRQRAGEVSKETWGVAPSTLEGLE----------SPPHPETQRPRAGAGGR--RR 52
GG AQR RAG ++ G APS G E PP PE AGGR RR
Sbjct: 46 GGRSAQR-RAGAGARRPIGAAPSVGPGGELQGWGRKSGCRPPGPE-----GWAGGRKLRR 99
Query: 53 WGATGGEGPRRPATRACADPGTRPFTYRWNRDAPFPGRGRFSRTRGDGKRARTEAPSGSA 112
W PRR + C P + R R AP P + G G+ G
Sbjct: 100 WLP-----PRRFSNFCCRSPCAQTAVRRRRRRAPSPRGAGWREGAGAGRGTPATMAGGEW 154
Query: 113 AEKPL 117
A +PL
Sbjct: 155 AAEPL 159
>gi|169211031 PREDICTED: hypothetical protein [Homo sapiens]
Length = 257
Score = 40.4 bits (93), Expect = 8e-04
Identities = 41/125 (32%), Positives = 48/125 (38%), Gaps = 23/125 (18%)
Query: 5 GGEEAQRQRAGEVSKETWGVAPSTLEGLE----------SPPHPETQRPRAGAGGR--RR 52
GG AQR RAG ++ G APS G E PP PE AGGR RR
Sbjct: 46 GGRSAQR-RAGAGARRPIGAAPSVGPGGELQGWGRKSGCRPPGPE-----GWAGGRKLRR 99
Query: 53 WGATGGEGPRRPATRACADPGTRPFTYRWNRDAPFPGRGRFSRTRGDGKRARTEAPSGSA 112
W PRR + C P + R R AP P + G G+ G
Sbjct: 100 WLP-----PRRFSNFCCRSPCAQTAVRRRRRRAPSPRGAGWREGAGAGRGTPATMAGGEW 154
Query: 113 AEKPL 117
A +PL
Sbjct: 155 AAEPL 159
>gi|239755398 PREDICTED: hypothetical protein [Homo sapiens]
Length = 359
Score = 36.6 bits (83), Expect = 0.011
Identities = 31/86 (36%), Positives = 37/86 (43%), Gaps = 11/86 (12%)
Query: 62 RRPATRACA---DPGTRPFTYRWNRDAPFPGRGRFSR----TRGDGKRARTEAPSGSAAE 114
R+ +TR+ A PG RP + R P G G R RG G R A + SAA
Sbjct: 13 RKYSTRSAAFQKPPGRRPMSSRPLSRTPPHGGGEMVRRPSGARGGGDPGRPGARAFSAAS 72
Query: 115 ----KPLPVAAADGRLKLQLWRGASP 136
+P AA GR LWR SP
Sbjct: 73 CQAGRPWRCGAAGGRAAAALWRAGSP 98
Score = 31.2 bits (69), Expect = 0.47
Identities = 29/110 (26%), Positives = 40/110 (36%), Gaps = 19/110 (17%)
Query: 38 PETQRPRAGAGG--RRRWGATGGEGPRRPATRA-------------CADPGTRPFTYRWN 82
P ++ P G G RR GA GG P RP RA C G R W
Sbjct: 35 PLSRTPPHGGGEMVRRPSGARGGGDPGRPGARAFSAASCQAGRPWRCGAAGGRAAAALWR 94
Query: 83 RDAPFPGRGRFSRTRGDGKRARTEAPSGSAAEKPLPVAAADGRLKLQLWR 132
+P P R+ + + +A G ++ P+ AA +L R
Sbjct: 95 AGSPNPENPRYPPPSHQHQHEKLDALEGCSS----PITAAQPASGFRLHR 140
>gi|239742445 PREDICTED: hypothetical protein XP_002342517 [Homo
sapiens]
Length = 199
Score = 36.6 bits (83), Expect = 0.011
Identities = 38/150 (25%), Positives = 58/150 (38%), Gaps = 16/150 (10%)
Query: 32 LESPPHPETQRPRAGAGGRRRWG--ATGGEGPRRPATRACADPGTRPFTYRWNRDAPFPG 89
LE+P E A G R+WG G PR T A + P T T DAP P
Sbjct: 15 LEAPGTAERGSIAAEKRGTRKWGWACALGSAPRATPTSASSQPDTCRGTRATLGDAPSPP 74
Query: 90 RGRFS-----RTRGDGKRARTEAPSGSAA-------EKPLPVAAADGRLKLQLWRGASPQ 137
S R G+ R + +A+ PL + + R + LW+G + Q
Sbjct: 75 FSGSSQPVTPRKLRCGQSQRLQPAQDTASFGHSHRFSSPLILHLVNERFRRSLWKGINSQ 134
Query: 138 VAV--KCFVQTKLQRLLPNRWKQSVWTKES 165
+ + C ++ L + WK + W + +
Sbjct: 135 LTLFGICLFRSCLLKKEGWEWKGAEWGRSA 164
>gi|10835246 Kruppel-like factor 1 (erythroid) [Homo sapiens]
Length = 362
Score = 35.4 bits (80), Expect = 0.025
Identities = 41/131 (31%), Positives = 49/131 (37%), Gaps = 18/131 (13%)
Query: 20 ETWGVAPSTLEGLESPPHPETQRPRAGAGG--RRRWGATGGEGPRRPATRACAD------ 71
+T +APS G + PP PET AG G G+ G RPA RA A
Sbjct: 92 QTCALAPSEASGAQYPPPPETLGAYAGGPGLVAGLLGSEDHSGWVRPALRARAPDAFVGP 151
Query: 72 -----PGTRPFTYRWNRDAPFPGRGR----FSRTRGDGKRARTEAPSGSAAEKPLPVAAA 122
P P P PG G F RT G A + AP G + P A
Sbjct: 152 ALAPAPAPEPKALALQPVYPGPGAGSSGGYFPRT-GLSVPAASGAPYGLLSGYPAMYPAP 210
Query: 123 DGRLKLQLWRG 133
+ QL+RG
Sbjct: 211 QYQGHFQLFRG 221
>gi|239749124 PREDICTED: zinc finger protein 716 [Homo sapiens]
Length = 1215
Score = 35.4 bits (80), Expect = 0.025
Identities = 41/127 (32%), Positives = 50/127 (39%), Gaps = 21/127 (16%)
Query: 2 KEVGGEEAQRQRAGEVS--KETWGVAPSTLEGLESPPHPETQRPRAGA--------GGRR 51
+E GE+ G+V+ + VA E + PHP R A GR+
Sbjct: 48 QEHNGEQHHDVDKGQVTGGQHRRAVARLPAEPAHAVPHPVRPAARLRAPARDPVPLAGRQ 107
Query: 52 RWGAT--GGEGPRR-PATRACADPGTRPFTYRWNRDAPFPGRGRF---SRTRGDGKRART 105
R GA G GP R PA RA P +AP PGR RF S+ RG RA
Sbjct: 108 RAGAAPRGPGGPARTPAVRAGRRAADGP-----GEEAPAPGRARFSGLSQPRGPQPRAAV 162
Query: 106 EAPSGSA 112
G A
Sbjct: 163 RPRRGGA 169
>gi|239757960 PREDICTED: hypothetical protein [Homo sapiens]
Length = 292
Score = 34.3 bits (77), Expect = 0.055
Identities = 33/87 (37%), Positives = 36/87 (41%), Gaps = 11/87 (12%)
Query: 46 GAGGRRRWGATGGEGPRRPATRACADPG-----TRPFTYRWNRDAPFPGRGRFSRTRGDG 100
G G R GA G G RRPA R A PG R + R AP PGR SR G
Sbjct: 2 GLGPRPSAGAGAGAG-RRPAARQVAPPGGPXSLARTHSRRHPDHAPPPGRPSCSRPLCAG 60
Query: 101 KRA-----RTEAPSGSAAEKPLPVAAA 122
APS + +PVAAA
Sbjct: 61 SSCLATPEPARAPSIAEPGPGIPVAAA 87
>gi|239741651 PREDICTED: hypothetical protein XP_002342270 [Homo
sapiens]
Length = 337
Score = 34.3 bits (77), Expect = 0.055
Identities = 36/134 (26%), Positives = 55/134 (41%), Gaps = 23/134 (17%)
Query: 12 QRAGEVSKETWGVAPSTLEGLESPPHPETQRPRA---GAGGRRR---WGATGGEGPRRPA 65
Q AG + G +P T G + QR +A GA R++ WG ++ A
Sbjct: 121 QDAGRAGSQVCGSSPQTRGG----GGKKLQRQKATVMGAKSRKKPQHWG-------QKAA 169
Query: 66 TRACADPGTRPFTYRWNRDAPFPGRGRFSRTRGDG-KRARTEAPSGSAAEKPLPVAAADG 124
T PG + A + R +++RG G K+ R E P+ + A+ P AAA
Sbjct: 170 TAGAKSPGGGGKKPGQEKPAATGEKTRAAKSRGGGGKKPRREKPAAAGAKNPQKAAAAGA 229
Query: 125 RL-----KLQLWRG 133
+ + WRG
Sbjct: 230 KFREAGGRKPRWRG 243
>gi|239748481 PREDICTED: hypothetical protein [Homo sapiens]
Length = 199
Score = 33.9 bits (76), Expect = 0.072
Identities = 37/150 (24%), Positives = 57/150 (38%), Gaps = 16/150 (10%)
Query: 32 LESPPHPETQRPRAGAGGRRRWG--ATGGEGPRRPATRACADPGTRPFTYRWNRDAPFPG 89
LE+P A G R+WG G PR T A + P T T DAP P
Sbjct: 15 LEAPGTAVRGSIAAEKRGTRKWGWACALGSAPRATPTSASSQPDTCRGTRATLGDAPSPP 74
Query: 90 RGRFS-----RTRGDGKRARTEAPSGSAA-------EKPLPVAAADGRLKLQLWRGASPQ 137
S R G+ R + +A+ PL + + R + LW+G + Q
Sbjct: 75 FSGSSQPVTPRKLRCGQSQRLQPAQDTASFGHSHRFSSPLILHLVNERFRRSLWKGINSQ 134
Query: 138 VAV--KCFVQTKLQRLLPNRWKQSVWTKES 165
+ + C ++ L + WK + W + +
Sbjct: 135 LTLFGICLFRSCLLKKEGWEWKGAEWGRSA 164
>gi|239741505 PREDICTED: hypothetical protein XP_002342218 [Homo
sapiens]
Length = 343
Score = 33.9 bits (76), Expect = 0.072
Identities = 35/118 (29%), Positives = 45/118 (38%), Gaps = 15/118 (12%)
Query: 26 PSTLEGLESPPHP--ETQRPRAGAGGRRRWGATGGEGPR-------RPATRACADPGTRP 76
P+ L+G P + Q P +GA G+ A PR RP R+ DP R
Sbjct: 21 PTQLQGRRDEVIPVLQLQVPLSGAEGKELLAAQAAHRPRQQQRQQQRPRPRS-PDPAARG 79
Query: 77 FTYRWNRDAPFPGRGRFSRTRGDG----KRARTEAPSGSAAEKPLPVAAADGRLKLQL 130
R PG + GDG R R AP A PLP+ G ++L L
Sbjct: 80 QHVPELRSRK-PGPAARTEEGGDGWVVESRRRGNAPDSGTAPTPLPLGRVRGPIRLTL 136
>gi|21735552 mitogen-activated protein kinase kinase kinase 12 [Homo
sapiens]
Length = 859
Score = 33.5 bits (75), Expect = 0.094
Identities = 31/112 (27%), Positives = 41/112 (36%), Gaps = 33/112 (29%)
Query: 22 WGVAPSTLEGLE--------SPPHPETQRPRAGAGGRRRWGATGGEGPRRPATRACADPG 73
W P L GL S P+ G+ GR GATGG G DPG
Sbjct: 587 WEACPPALRGLHHDLLLRKMSSSSPDLLSAALGSRGR---GATGGAG----------DPG 633
Query: 74 TRPFTYRWNRDAPFPGRGRFSRTRGDGKRART-EAPSGSAAEKPLPVAAADG 124
+ P P RG + G + + ++P G+ E P PV +G
Sbjct: 634 SPP-----------PARGDTPPSEGSAPGSTSPDSPGGAKGEPPPPVGPGEG 674
>gi|169204930 PREDICTED: hypothetical protein [Homo sapiens]
Length = 373
Score = 33.5 bits (75), Expect = 0.094
Identities = 38/132 (28%), Positives = 45/132 (34%), Gaps = 21/132 (15%)
Query: 13 RAGEVSKETWGVAPSTLEGLESPPHPETQRPRAGAGGRRRWGATGGEGPRRPATRACADP 72
R G + WG + G+ P P R G GG GG G R RA P
Sbjct: 168 RGGAAAPRGWGGQGAERLGVHQPGLPTHAALRGGGGG----SEGGGGGARPSPPRARQPP 223
Query: 73 GTRP---------FTYRWNRDAPFPGRGRFSRTRG---DGKRARTEAPSGSAAEKPLPVA 120
RP R A G+ SR + R R A S SAA +P
Sbjct: 224 SGRPRPRRTRLLGSAERHTGRAALARHGQLSRPHAAVRNSSRGRGAATSVSAAARPTRGG 283
Query: 121 A-----ADGRLK 127
A ADGR +
Sbjct: 284 ARGHRRADGRAR 295
Score = 27.3 bits (59), Expect = 6.7
Identities = 42/145 (28%), Positives = 52/145 (35%), Gaps = 33/145 (22%)
Query: 15 GEVSKETWGVAP----STLEGLESPPHPETQRPRAGAGGRRRWGATGGE--GPRRPA--T 66
G + WG+ P S L GL +P R GA R WG G E G +P T
Sbjct: 143 GSGKRRGWGLRPQRVRSRLAGLGAP--------RGGAAAPRGWGGQGAERLGVHQPGLPT 194
Query: 67 RAC----------ADPGTRPFTYRWNRDAPFPGRGRFSRTR--GDGKRARTEAPSGSAAE 114
A G RP R + P GR R RTR G +R A +
Sbjct: 195 HAALRGGGGGSEGGGGGARPSPPRARQ--PPSGRPRPRRTRLLGSAERHTGRAALARHGQ 252
Query: 115 KPLPVAAADGRLKLQLWRGASPQVA 139
P AA + RGA+ V+
Sbjct: 253 LSRPHAAVRNSSR---GRGAATSVS 274
>gi|239750393 PREDICTED: hypothetical protein [Homo sapiens]
Length = 373
Score = 33.5 bits (75), Expect = 0.094
Identities = 38/132 (28%), Positives = 45/132 (34%), Gaps = 21/132 (15%)
Query: 13 RAGEVSKETWGVAPSTLEGLESPPHPETQRPRAGAGGRRRWGATGGEGPRRPATRACADP 72
R G + WG + G+ P P R G GG GG G R RA P
Sbjct: 168 RGGAAAPRGWGGQGAERLGVHQPGLPTHAALRGGGGG----SEGGGGGARPSPPRARQPP 223
Query: 73 GTRP---------FTYRWNRDAPFPGRGRFSRTRG---DGKRARTEAPSGSAAEKPLPVA 120
RP R A G+ SR + R R A S SAA +P
Sbjct: 224 SGRPRPRRTRLLGSAERHTGRAALARHGQLSRPHAAVRNSSRGRGAATSVSAAARPTRGG 283
Query: 121 A-----ADGRLK 127
A ADGR +
Sbjct: 284 ARGHRRADGRAR 295
Score = 27.3 bits (59), Expect = 6.7
Identities = 42/145 (28%), Positives = 52/145 (35%), Gaps = 33/145 (22%)
Query: 15 GEVSKETWGVAP----STLEGLESPPHPETQRPRAGAGGRRRWGATGGE--GPRRPA--T 66
G + WG+ P S L GL +P R GA R WG G E G +P T
Sbjct: 143 GSGKRRGWGLRPQRVRSRLAGLGAP--------RGGAAAPRGWGGQGAERLGVHQPGLPT 194
Query: 67 RAC----------ADPGTRPFTYRWNRDAPFPGRGRFSRTR--GDGKRARTEAPSGSAAE 114
A G RP R + P GR R RTR G +R A +
Sbjct: 195 HAALRGGGGGSEGGGGGARPSPPRARQ--PPSGRPRPRRTRLLGSAERHTGRAALARHGQ 252
Query: 115 KPLPVAAADGRLKLQLWRGASPQVA 139
P AA + RGA+ V+
Sbjct: 253 LSRPHAAVRNSSR---GRGAATSVS 274
>gi|239744694 PREDICTED: hypothetical protein [Homo sapiens]
Length = 373
Score = 33.5 bits (75), Expect = 0.094
Identities = 38/132 (28%), Positives = 45/132 (34%), Gaps = 21/132 (15%)
Query: 13 RAGEVSKETWGVAPSTLEGLESPPHPETQRPRAGAGGRRRWGATGGEGPRRPATRACADP 72
R G + WG + G+ P P R G GG GG G R RA P
Sbjct: 168 RGGAAAPRGWGGQGAERLGVHQPGLPTHAALRGGGGG----SEGGGGGARPSPPRARQPP 223
Query: 73 GTRP---------FTYRWNRDAPFPGRGRFSRTRG---DGKRARTEAPSGSAAEKPLPVA 120
RP R A G+ SR + R R A S SAA +P
Sbjct: 224 SGRPRPRRTRLLGSAERHTGRAALARHGQLSRPHAAVRNSSRGRGAATSVSAAARPTRGG 283
Query: 121 A-----ADGRLK 127
A ADGR +
Sbjct: 284 ARGHRRADGRAR 295
Score = 27.3 bits (59), Expect = 6.7
Identities = 42/145 (28%), Positives = 52/145 (35%), Gaps = 33/145 (22%)
Query: 15 GEVSKETWGVAP----STLEGLESPPHPETQRPRAGAGGRRRWGATGGE--GPRRPA--T 66
G + WG+ P S L GL +P R GA R WG G E G +P T
Sbjct: 143 GSGKRRGWGLRPQRVRSRLAGLGAP--------RGGAAAPRGWGGQGAERLGVHQPGLPT 194
Query: 67 RAC----------ADPGTRPFTYRWNRDAPFPGRGRFSRTR--GDGKRARTEAPSGSAAE 114
A G RP R + P GR R RTR G +R A +
Sbjct: 195 HAALRGGGGGSEGGGGGARPSPPRARQ--PPSGRPRPRRTRLLGSAERHTGRAALARHGQ 252
Query: 115 KPLPVAAADGRLKLQLWRGASPQVA 139
P AA + RGA+ V+
Sbjct: 253 LSRPHAAVRNSSR---GRGAATSVS 274
>gi|122937241 SH3 and multiple ankyrin repeat domains 3 [Homo
sapiens]
Length = 1747
Score = 33.5 bits (75), Expect = 0.094
Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 93 FSRTRGDGKRARTEAPSGSAAEKPLPVAAADGRLKLQLWRGASPQVAVKCFV-QTKLQRL 151
F T KR R PSG A+ +PL +A+D LK + ASP +++ Q LQRL
Sbjct: 346 FRETPSYAKRRRLAGPSGLASPRPLQRSASDINLKGEAQPAASPGPSLRSLPHQLLLQRL 405
>gi|239755589 PREDICTED: hypothetical protein [Homo sapiens]
Length = 356
Score = 33.1 bits (74), Expect = 0.12
Identities = 34/97 (35%), Positives = 41/97 (42%), Gaps = 18/97 (18%)
Query: 30 EGLESPPHPETQRPRAGAGGRRRWGATGGE--GPRRPATRACADPGT--------RPFTY 79
EG + PP ET +P A GG G G RR RA PG+ RP +
Sbjct: 48 EGRQRPP--ETLQPPANRGG----GPVGAPRVSRRREGLRALKVPGSEPQVGAEVRPSSR 101
Query: 80 RWNRDAPFPGRGRFSRTRGDGKRARTEAPSGSAAEKP 116
+ D GRGR R R +R T+AP G KP
Sbjct: 102 KSLSDHRGLGRGR--RRRRQRRRWGTQAPCGRLRAKP 136
>gi|169160903 PREDICTED: hypothetical protein [Homo sapiens]
Length = 426
Score = 33.1 bits (74), Expect = 0.12
Identities = 36/96 (37%), Positives = 40/96 (41%), Gaps = 13/96 (13%)
Query: 35 PPHPETQRPRAGAGGRRRW-GATGGEGPRRPATRACADPGTR-----PFTYRWNRDAPFP 88
P P QRP A R W GA G A PG+R P T+R P P
Sbjct: 45 PILPAPQRPPTRA---REWEGAAWAAGATGVGAALLALPGSRRLGRVPLTFREASPGPAP 101
Query: 89 G--RGRFSRTRGDGKRARTEAPSGSAAEKPLPVAAA 122
G R R S R G R R APS SA ++P A A
Sbjct: 102 GAPRARGSCGREPGPR-RRRAPS-SAGKRPAAAARA 135
>gi|169218206 PREDICTED: similar to hCG2042704 [Homo sapiens]
Length = 317
Score = 33.1 bits (74), Expect = 0.12
Identities = 35/123 (28%), Positives = 43/123 (34%), Gaps = 22/123 (17%)
Query: 25 APSTLEGLESPPHPETQRPRAGAGGRRRWGATGGEGPRRPATRACADPGTRPFTYRWNRD 84
AP + L S P P RP G G R G PA PG R D
Sbjct: 58 APRPVPALPSSPSPPPPRPFRGRGPHRSLGCDAA-----PAALGNGRPGAR-------SD 105
Query: 85 APFPGRGRFSRTRGDGKRARTEAPSGSAAEKPLPVAAADGRLKLQLW--RGASPQVAVKC 142
P G G G+ + + PLP+ GR + W GASP V +C
Sbjct: 106 RPCGAGG-----DGGGRLPGDDDDNDEEQPPPLPLT---GRCWARAWAREGASPVVEKRC 157
Query: 143 FVQ 145
+Q
Sbjct: 158 PLQ 160
>gi|219804203 rabphilin 3A homolog isoform 1 [Homo sapiens]
Length = 694
Score = 33.1 bits (74), Expect = 0.12
Identities = 32/120 (26%), Positives = 47/120 (39%), Gaps = 7/120 (5%)
Query: 5 GGEEAQRQRAGEVSKETWGVAPSTLEGLESPPHPETQRPRAGAGGRRRWGATGGEGPRRP 64
G ++ R AG + + ++SP P+ +P G R G G ++P
Sbjct: 256 GAGDSSRSPAGLRRANSVQASRPAPGSVQSPAPPQPGQPGTPGGSRPGPGPAGRFPDQKP 315
Query: 65 ATRACADPGTR--PFTYRWNRDAPFPGRG----RFSRTRGDGKRARTEAPSGSAAEKPLP 118
A +DPGT P R +P G R S G +A AP +AA +P P
Sbjct: 316 EV-APSDPGTTAPPREERTGGVGGYPAVGAREDRMSHPSGPYSQASAAAPQPAAARQPPP 374
>gi|45267837 rabphilin 3A homolog isoform 2 [Homo sapiens]
Length = 690
Score = 33.1 bits (74), Expect = 0.12
Identities = 32/120 (26%), Positives = 47/120 (39%), Gaps = 7/120 (5%)
Query: 5 GGEEAQRQRAGEVSKETWGVAPSTLEGLESPPHPETQRPRAGAGGRRRWGATGGEGPRRP 64
G ++ R AG + + ++SP P+ +P G R G G ++P
Sbjct: 252 GAGDSSRSPAGLRRANSVQASRPAPGSVQSPAPPQPGQPGTPGGSRPGPGPAGRFPDQKP 311
Query: 65 ATRACADPGTR--PFTYRWNRDAPFPGRG----RFSRTRGDGKRARTEAPSGSAAEKPLP 118
A +DPGT P R +P G R S G +A AP +AA +P P
Sbjct: 312 EV-APSDPGTTAPPREERTGGVGGYPAVGAREDRMSHPSGPYSQASAAAPQPAAARQPPP 370
>gi|14149716 protein phosphatase 1, regulatory subunit 12C [Homo
sapiens]
Length = 782
Score = 33.1 bits (74), Expect = 0.12
Identities = 26/72 (36%), Positives = 31/72 (43%), Gaps = 5/72 (6%)
Query: 5 GGEEAQRQRAGEVSK-ETWGVAPSTLEGLESPPHPETQRP--RAGAGGRRRWG--ATGGE 59
GG Q + GE E P TL G+ SPPHP + P A RR+G TG
Sbjct: 369 GGPPIQDEDEGEEGPTEPPPAEPRTLNGVSSPPHPSPKSPVQLEEAPFSRRFGLLKTGSS 428
Query: 60 GPRRPATRACAD 71
G P R A+
Sbjct: 429 GALGPPERRTAE 440
Score = 26.9 bits (58), Expect = 8.8
Identities = 32/129 (24%), Positives = 45/129 (34%), Gaps = 18/129 (13%)
Query: 4 VGGEEAQRQRAG------EVSKETWGVAPSTLEGLESPPH--PETQRPRAGAGGRRRWGA 55
V EE++ QR + + T GV + L+ E PE+++P RR
Sbjct: 537 VRDEESESQRKARSRLMRQSRRSTQGVTLTDLKEAEKAAGKAPESEKPAQSLDPSRRPRV 596
Query: 56 TGGEGPRRPATRACADPGTRPFTYRWNRDAPFPGRGRFSRTRGDGKRARTEAPSGSAAEK 115
G E PA RA A G P P R R G R E A++
Sbjct: 597 PGVENSDSPAQRAEAPDG----------QGPGPQAAREHRKVGKEWRGPAEGEEAEPADR 646
Query: 116 PLPVAAADG 124
+ +G
Sbjct: 647 SQESSTLEG 655
>gi|155722994 zinc finger CCCH-type containing 3 [Homo sapiens]
Length = 948
Score = 33.1 bits (74), Expect = 0.12
Identities = 29/98 (29%), Positives = 43/98 (43%), Gaps = 17/98 (17%)
Query: 61 PRRPATRACADPGTRPFTYRWNRDAPFPGRGRFSRTRGDGKRARTEAPSGSAAEKPLPVA 120
PR+PAT + PG+ P Y+W +P S + R ++EA S A + PV
Sbjct: 361 PRKPATSS--KPGSAPSKYKWKASSP-------SASSSSSFRWQSEASSKDHASQLSPVL 411
Query: 121 A--------ADGRLKLQLWRGASPQVAVKCFVQTKLQR 150
+ A G L+ G +P A K +TK+ R
Sbjct: 412 SRSPSGDRPAVGHSGLKPLSGETPLSAYKVKSRTKIIR 449
>gi|7662234 rab11-family interacting protein 3 isoform 1 [Homo
sapiens]
Length = 756
Score = 32.7 bits (73), Expect = 0.16
Identities = 34/123 (27%), Positives = 43/123 (34%), Gaps = 16/123 (13%)
Query: 22 WGVAPST-LEGLESPPHPETQRPRAGAGGRRRWGATGGEGPRRPATRACADPGTRPFTYR 80
W P+ LEG P P PR+G G+ G GPR A DP +
Sbjct: 70 WSAGPAPGLEGGPRDPGPSAPPPRSGPRGQLASPDAPGPGPRSEAPLPELDP-----LFS 124
Query: 81 WNRD------APFPGRGRFSRTRGDGKRARTEAPSGSAAEKPLPVAAADGRLKLQLWRGA 134
W + A P F R +G R + P P A G L L+ G+
Sbjct: 125 WTEEPEECGPASCPESAPF-RLQGSSSSHRARGEVDVFSPFPAPTA---GELALEQGPGS 180
Query: 135 SPQ 137
PQ
Sbjct: 181 PPQ 183
>gi|239744409 PREDICTED: hypothetical protein XP_002343155 [Homo
sapiens]
Length = 106
Score = 32.7 bits (73), Expect = 0.16
Identities = 33/98 (33%), Positives = 44/98 (44%), Gaps = 23/98 (23%)
Query: 12 QRAGEVSKETW---GVAPSTL-EGLESPPHPETQRPRAGAGGRRRWGATGGEGPRRPATR 67
+RAG S + G A TL G SPP RP AG GR +G +GP+RP
Sbjct: 17 RRAGPESLRAFAPAGEAQKTLPRGSASPPRSPALRPAAGLRGR-----SGAQGPQRP--- 68
Query: 68 ACADPGTRPFTYRWNRDAPFPGRGRFSRTR---GDGKR 102
RP Y +++A P R +R R G+ +R
Sbjct: 69 -------RPAHYN-SQEASRPDRRGATRERCVCGESRR 98
>gi|120587019 zinc finger protein 318 [Homo sapiens]
Length = 2279
Score = 32.7 bits (73), Expect = 0.16
Identities = 30/98 (30%), Positives = 40/98 (40%), Gaps = 14/98 (14%)
Query: 40 TQRPRAGAGGRRRWGATGGE--GPRR-------PATRACADPGTRPFT---YRWNRDAPF 87
+ RP+ GG R G + G GP R P+ + P RP + +R R +P
Sbjct: 12 SHRPKDDGGGGPRSGRSSGSSSGPARRSSPPPPPSGSSSRTPARRPRSPSGHRGRRASPS 71
Query: 88 PGRGRFSRTRGDGKRARTEAPSGSAAEKPLPVAAADGR 125
P RGR R RAR +PS + P A R
Sbjct: 72 PPRGR--RVSPSPPRARRGSPSPPRGRRLFPPGPAGFR 107
>gi|154813195 DENN/MADD domain containing 2A [Homo sapiens]
Length = 1009
Score = 32.3 bits (72), Expect = 0.21
Identities = 40/140 (28%), Positives = 49/140 (35%), Gaps = 21/140 (15%)
Query: 3 EVGGEEAQRQRAGEVSKETWGVAPSTLEGLESPPHPETQRPRAGAGGRRRWGAT------ 56
E G + G S+ + V PS LEG E P PE R G+ RR W +
Sbjct: 196 EAGSTLPENLGGGSGSEVSQRVHPSDLEGRE--PTPELVEDRKGS-CRRPWDRSLENVYR 252
Query: 57 GGEG-PRRPATRACADPGTRPFTYRWNRDAPFPGRGRFSRTRGDG--KRARTEAPSGSAA 113
G EG P +P P R G G G G K R P S
Sbjct: 253 GSEGSPTKPFINPLPKP---------RRTFKHAGEGDKDGKPGIGFRKEKRNLPPLPSLP 303
Query: 114 EKPLPVAAADGRLKLQLWRG 133
PLP + + +LW G
Sbjct: 304 PPPLPSSPPPSSVNRRLWTG 323
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.134 0.430
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,569,611
Number of Sequences: 37866
Number of extensions: 499509
Number of successful extensions: 2664
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 225
Number of HSP's that attempted gapping in prelim test: 2495
Number of HSP's gapped (non-prelim): 391
length of query: 173
length of database: 18,247,518
effective HSP length: 95
effective length of query: 78
effective length of database: 14,650,248
effective search space: 1142719344
effective search space used: 1142719344
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.