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Search of human proteins with 169166158
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169166158 PREDICTED: hypothetical protein LOC642204 [Homo
sapiens]
(102 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169217749 PREDICTED: hCG2042718 [Homo sapiens] 218 8e-58
gi|239750222 PREDICTED: hCG2042718 [Homo sapiens] 218 8e-58
gi|169166158 PREDICTED: hypothetical protein LOC642204 [Homo sap... 218 8e-58
gi|239746550 PREDICTED: hypothetical protein XP_002343775 [Homo ... 198 9e-52
gi|239747129 PREDICTED: hypothetical protein XP_002344491 [Homo ... 194 2e-50
gi|169218130 PREDICTED: hypothetical protein [Homo sapiens] 180 2e-46
gi|169217341 PREDICTED: hypothetical protein [Homo sapiens] 180 2e-46
gi|239750225 PREDICTED: hypothetical protein XP_002347322 [Homo ... 127 2e-30
gi|60460920 ankyrin repeat domain 20 family, member A3 [Homo sap... 123 4e-29
gi|60115723 ankyrin repeat domain 20 family, member A2 [Homo sap... 123 4e-29
gi|156104901 ankyrin repeat domain 20 family, member A1 [Homo sa... 123 4e-29
gi|149363679 ankyrin repeat domain 20 family, member A4 [Homo sa... 121 1e-28
gi|239757009 PREDICTED: ankyrin repeat domain 20 family, member ... 110 2e-25
gi|239751523 PREDICTED: ankyrin repeat domain 20 family, member ... 110 2e-25
gi|239755047 PREDICTED: ankyrin repeat domain 18A [Homo sapiens] 75 8e-15
gi|239749578 PREDICTED: ankyrin repeat domain 18A [Homo sapiens] 75 8e-15
gi|239743724 PREDICTED: ankyrin repeat domain 18A [Homo sapiens] 75 8e-15
gi|239755011 PREDICTED: ankyrin repeat domain 18B [Homo sapiens] 74 3e-14
gi|239749555 PREDICTED: ankyrin repeat domain 18B [Homo sapiens] 74 3e-14
gi|239743705 PREDICTED: ankyrin repeat domain 18B [Homo sapiens] 72 7e-14
gi|96975023 ankyrin repeat and death domain containing 1A [Homo ... 44 4e-05
gi|15011946 tripartite motif protein TRIM5 isoform delta [Homo s... 43 6e-05
gi|52353284 olfactory receptor, family 7, subfamily G, member 1 ... 39 7e-04
gi|154354990 ankyrin repeat domain 26 [Homo sapiens] 38 0.002
gi|7706194 proline rich 16 [Homo sapiens] 38 0.002
gi|218083233 chitinase domain containing 1 isoform b [Homo sapiens] 37 0.003
gi|83627721 NIMA-related kinase 5 [Homo sapiens] 36 0.006
gi|239756999 PREDICTED: ankyrin repeat domain 62 [Homo sapiens] 36 0.007
gi|239751514 PREDICTED: ankyrin repeat domain 62 isoform 4 [Homo... 36 0.007
gi|239746016 PREDICTED: ankyrin repeat domain 62 isoform 1 [Homo... 36 0.007
>gi|169217749 PREDICTED: hCG2042718 [Homo sapiens]
Length = 102
Score = 218 bits (555), Expect = 8e-58
Identities = 102/102 (100%), Positives = 102/102 (100%)
Query: 1 MKLFGFGSRRGQTAHGSIEHVYTGSRYRIWDSELQKIHRAAVKGDAAGVECCLARRSGDL 60
MKLFGFGSRRGQTAHGSIEHVYTGSRYRIWDSELQKIHRAAVKGDAAGVECCLARRSGDL
Sbjct: 1 MKLFGFGSRRGQTAHGSIEHVYTGSRYRIWDSELQKIHRAAVKGDAAGVECCLARRSGDL 60
Query: 61 DAPDKQHRVSLLCPGWCPMAQSWLTATSACRVQAILLPQPPK 102
DAPDKQHRVSLLCPGWCPMAQSWLTATSACRVQAILLPQPPK
Sbjct: 61 DAPDKQHRVSLLCPGWCPMAQSWLTATSACRVQAILLPQPPK 102
>gi|239750222 PREDICTED: hCG2042718 [Homo sapiens]
Length = 102
Score = 218 bits (555), Expect = 8e-58
Identities = 102/102 (100%), Positives = 102/102 (100%)
Query: 1 MKLFGFGSRRGQTAHGSIEHVYTGSRYRIWDSELQKIHRAAVKGDAAGVECCLARRSGDL 60
MKLFGFGSRRGQTAHGSIEHVYTGSRYRIWDSELQKIHRAAVKGDAAGVECCLARRSGDL
Sbjct: 1 MKLFGFGSRRGQTAHGSIEHVYTGSRYRIWDSELQKIHRAAVKGDAAGVECCLARRSGDL 60
Query: 61 DAPDKQHRVSLLCPGWCPMAQSWLTATSACRVQAILLPQPPK 102
DAPDKQHRVSLLCPGWCPMAQSWLTATSACRVQAILLPQPPK
Sbjct: 61 DAPDKQHRVSLLCPGWCPMAQSWLTATSACRVQAILLPQPPK 102
>gi|169166158 PREDICTED: hypothetical protein LOC642204 [Homo
sapiens]
Length = 102
Score = 218 bits (555), Expect = 8e-58
Identities = 102/102 (100%), Positives = 102/102 (100%)
Query: 1 MKLFGFGSRRGQTAHGSIEHVYTGSRYRIWDSELQKIHRAAVKGDAAGVECCLARRSGDL 60
MKLFGFGSRRGQTAHGSIEHVYTGSRYRIWDSELQKIHRAAVKGDAAGVECCLARRSGDL
Sbjct: 1 MKLFGFGSRRGQTAHGSIEHVYTGSRYRIWDSELQKIHRAAVKGDAAGVECCLARRSGDL 60
Query: 61 DAPDKQHRVSLLCPGWCPMAQSWLTATSACRVQAILLPQPPK 102
DAPDKQHRVSLLCPGWCPMAQSWLTATSACRVQAILLPQPPK
Sbjct: 61 DAPDKQHRVSLLCPGWCPMAQSWLTATSACRVQAILLPQPPK 102
>gi|239746550 PREDICTED: hypothetical protein XP_002343775 [Homo
sapiens]
Length = 102
Score = 198 bits (503), Expect = 9e-52
Identities = 96/102 (94%), Positives = 97/102 (95%)
Query: 1 MKLFGFGSRRGQTAHGSIEHVYTGSRYRIWDSELQKIHRAAVKGDAAGVECCLARRSGDL 60
MKLFGFGSRR QTA+GSIEHVYTGS YRIWDSELQKIHRAAVKGDAAGVE CLARRSGDL
Sbjct: 1 MKLFGFGSRRSQTANGSIEHVYTGSGYRIWDSELQKIHRAAVKGDAAGVERCLARRSGDL 60
Query: 61 DAPDKQHRVSLLCPGWCPMAQSWLTATSACRVQAILLPQPPK 102
DA DKQHRVSLLCPGWCPMAQSWLTATSACRVQAILLPQP K
Sbjct: 61 DALDKQHRVSLLCPGWCPMAQSWLTATSACRVQAILLPQPLK 102
>gi|239747129 PREDICTED: hypothetical protein XP_002344491 [Homo
sapiens]
Length = 102
Score = 194 bits (492), Expect = 2e-50
Identities = 95/102 (93%), Positives = 95/102 (93%)
Query: 1 MKLFGFGSRRGQTAHGSIEHVYTGSRYRIWDSELQKIHRAAVKGDAAGVECCLARRSGDL 60
MKLFGFGSRRGQTAHGSIEHVYTGS YRI DSELQKIHRAAVKGDA GVE CLARRSGDL
Sbjct: 1 MKLFGFGSRRGQTAHGSIEHVYTGSGYRIRDSELQKIHRAAVKGDAVGVERCLARRSGDL 60
Query: 61 DAPDKQHRVSLLCPGWCPMAQSWLTATSACRVQAILLPQPPK 102
DA DKQHRVSLLCPGWCPMAQSWLTATSAC VQAILLPQP K
Sbjct: 61 DALDKQHRVSLLCPGWCPMAQSWLTATSACWVQAILLPQPSK 102
>gi|169218130 PREDICTED: hypothetical protein [Homo sapiens]
Length = 102
Score = 180 bits (456), Expect = 2e-46
Identities = 91/102 (89%), Positives = 91/102 (89%)
Query: 1 MKLFGFGSRRGQTAHGSIEHVYTGSRYRIWDSELQKIHRAAVKGDAAGVECCLARRSGDL 60
MKLFGFGS RGQ AHGSIEHVY GS YRI DSELQKIHRAAVKGDAAGVE CLARRSG L
Sbjct: 1 MKLFGFGSCRGQRAHGSIEHVYMGSGYRIRDSELQKIHRAAVKGDAAGVERCLARRSGGL 60
Query: 61 DAPDKQHRVSLLCPGWCPMAQSWLTATSACRVQAILLPQPPK 102
DA DKQHRVSLLCPGWCPMAQS LTATSAC VQAILLPQ PK
Sbjct: 61 DALDKQHRVSLLCPGWCPMAQSGLTATSACSVQAILLPQLPK 102
>gi|169217341 PREDICTED: hypothetical protein [Homo sapiens]
Length = 102
Score = 180 bits (456), Expect = 2e-46
Identities = 91/102 (89%), Positives = 91/102 (89%)
Query: 1 MKLFGFGSRRGQTAHGSIEHVYTGSRYRIWDSELQKIHRAAVKGDAAGVECCLARRSGDL 60
MKLFGFGS RGQ AHGSIEHVY GS YRI DSELQKIHRAAVKGDAAGVE CLARRSG L
Sbjct: 1 MKLFGFGSCRGQRAHGSIEHVYMGSGYRIRDSELQKIHRAAVKGDAAGVERCLARRSGGL 60
Query: 61 DAPDKQHRVSLLCPGWCPMAQSWLTATSACRVQAILLPQPPK 102
DA DKQHRVSLLCPGWCPMAQS LTATSAC VQAILLPQ PK
Sbjct: 61 DALDKQHRVSLLCPGWCPMAQSGLTATSACSVQAILLPQLPK 102
>gi|239750225 PREDICTED: hypothetical protein XP_002347322 [Homo
sapiens]
Length = 68
Score = 127 bits (318), Expect = 2e-30
Identities = 63/68 (92%), Positives = 63/68 (92%)
Query: 1 MKLFGFGSRRGQTAHGSIEHVYTGSRYRIWDSELQKIHRAAVKGDAAGVECCLARRSGDL 60
MKLFGFGSRRGQTAHGSIEHVYTGS YRI DSELQKIHRAAVKGDA GVE CLARRSGDL
Sbjct: 1 MKLFGFGSRRGQTAHGSIEHVYTGSGYRIRDSELQKIHRAAVKGDAVGVERCLARRSGDL 60
Query: 61 DAPDKQHR 68
DA DKQHR
Sbjct: 61 DALDKQHR 68
>gi|60460920 ankyrin repeat domain 20 family, member A3 [Homo
sapiens]
Length = 823
Score = 123 bits (308), Expect = 4e-29
Identities = 62/71 (87%), Positives = 64/71 (90%)
Query: 1 MKLFGFGSRRGQTAHGSIEHVYTGSRYRIWDSELQKIHRAAVKGDAAGVECCLARRSGDL 60
MKLFGFGSRRGQTA GSI+HVYTGS YRI DSELQKIHRAAVKGDAA VE CLARRSGDL
Sbjct: 1 MKLFGFGSRRGQTAQGSIDHVYTGSGYRIRDSELQKIHRAAVKGDAAEVERCLARRSGDL 60
Query: 61 DAPDKQHRVSL 71
DA DKQHR +L
Sbjct: 61 DALDKQHRTAL 71
>gi|60115723 ankyrin repeat domain 20 family, member A2 [Homo
sapiens]
Length = 823
Score = 123 bits (308), Expect = 4e-29
Identities = 62/71 (87%), Positives = 64/71 (90%)
Query: 1 MKLFGFGSRRGQTAHGSIEHVYTGSRYRIWDSELQKIHRAAVKGDAAGVECCLARRSGDL 60
MKLFGFGSRRGQTA GSI+HVYTGS YRI DSELQKIHRAAVKGDAA VE CLARRSGDL
Sbjct: 1 MKLFGFGSRRGQTAQGSIDHVYTGSGYRIRDSELQKIHRAAVKGDAAEVERCLARRSGDL 60
Query: 61 DAPDKQHRVSL 71
DA DKQHR +L
Sbjct: 61 DALDKQHRTAL 71
>gi|156104901 ankyrin repeat domain 20 family, member A1 [Homo
sapiens]
Length = 823
Score = 123 bits (308), Expect = 4e-29
Identities = 62/71 (87%), Positives = 64/71 (90%)
Query: 1 MKLFGFGSRRGQTAHGSIEHVYTGSRYRIWDSELQKIHRAAVKGDAAGVECCLARRSGDL 60
MKLFGFGSRRGQTA GSI+HVYTGS YRI DSELQKIHRAAVKGDAA VE CLARRSGDL
Sbjct: 1 MKLFGFGSRRGQTAQGSIDHVYTGSGYRIRDSELQKIHRAAVKGDAAEVERCLARRSGDL 60
Query: 61 DAPDKQHRVSL 71
DA DKQHR +L
Sbjct: 61 DALDKQHRTAL 71
>gi|149363679 ankyrin repeat domain 20 family, member A4 [Homo
sapiens]
Length = 823
Score = 121 bits (304), Expect = 1e-28
Identities = 61/71 (85%), Positives = 64/71 (90%)
Query: 1 MKLFGFGSRRGQTAHGSIEHVYTGSRYRIWDSELQKIHRAAVKGDAAGVECCLARRSGDL 60
MKLFGFGSRRGQTA GSI+HVYTGS YRI DSELQKIHRAAVKGDAA VE CLARRSG+L
Sbjct: 1 MKLFGFGSRRGQTAQGSIDHVYTGSGYRIRDSELQKIHRAAVKGDAAEVERCLARRSGEL 60
Query: 61 DAPDKQHRVSL 71
DA DKQHR +L
Sbjct: 61 DALDKQHRTAL 71
>gi|239757009 PREDICTED: ankyrin repeat domain 20 family, member
A5 [Homo sapiens]
Length = 823
Score = 110 bits (275), Expect = 2e-25
Identities = 56/71 (78%), Positives = 61/71 (85%)
Query: 1 MKLFGFGSRRGQTAHGSIEHVYTGSRYRIWDSELQKIHRAAVKGDAAGVECCLARRSGDL 60
MKLFGF SRRGQT GSI+H+YTGS YRI SELQKIH+AAVKGDAA +E CLARRSGDL
Sbjct: 1 MKLFGFRSRRGQTVLGSIDHLYTGSGYRIRYSELQKIHKAAVKGDAAEMERCLARRSGDL 60
Query: 61 DAPDKQHRVSL 71
DA DKQHR +L
Sbjct: 61 DALDKQHRTAL 71
>gi|239751523 PREDICTED: ankyrin repeat domain 20 family, member
A5 [Homo sapiens]
Length = 823
Score = 110 bits (275), Expect = 2e-25
Identities = 56/71 (78%), Positives = 61/71 (85%)
Query: 1 MKLFGFGSRRGQTAHGSIEHVYTGSRYRIWDSELQKIHRAAVKGDAAGVECCLARRSGDL 60
MKLFGF SRRGQT GSI+H+YTGS YRI SELQKIH+AAVKGDAA +E CLARRSGDL
Sbjct: 1 MKLFGFRSRRGQTVLGSIDHLYTGSGYRIRYSELQKIHKAAVKGDAAEMERCLARRSGDL 60
Query: 61 DAPDKQHRVSL 71
DA DKQHR +L
Sbjct: 61 DALDKQHRTAL 71
>gi|239755047 PREDICTED: ankyrin repeat domain 18A [Homo sapiens]
Length = 1415
Score = 75.5 bits (184), Expect = 8e-15
Identities = 40/70 (57%), Positives = 46/70 (65%)
Query: 2 KLFGFGSRRGQTAHGSIEHVYTGSRYRIWDSELQKIHRAAVKGDAAGVECCLARRSGDLD 61
KLF FG R GQ S++ Y G Y I D EL+KIHRAA+KGDAA VE CL RR DLD
Sbjct: 110 KLFSFGRRLGQALLSSMDQEYAGPGYDIRDWELRKIHRAAIKGDAAEVERCLTRRFRDLD 169
Query: 62 APDKQHRVSL 71
A D++ R L
Sbjct: 170 ARDRKDRTVL 179
>gi|239749578 PREDICTED: ankyrin repeat domain 18A [Homo sapiens]
Length = 1002
Score = 75.5 bits (184), Expect = 8e-15
Identities = 40/70 (57%), Positives = 46/70 (65%)
Query: 2 KLFGFGSRRGQTAHGSIEHVYTGSRYRIWDSELQKIHRAAVKGDAAGVECCLARRSGDLD 61
KLF FG R GQ S++ Y G Y I D EL+KIHRAA+KGDAA VE CL RR DLD
Sbjct: 3 KLFSFGRRLGQALLSSMDQEYAGPGYDIRDWELRKIHRAAIKGDAAEVERCLTRRFRDLD 62
Query: 62 APDKQHRVSL 71
A D++ R L
Sbjct: 63 ARDRKDRTVL 72
>gi|239743724 PREDICTED: ankyrin repeat domain 18A [Homo sapiens]
Length = 1415
Score = 75.5 bits (184), Expect = 8e-15
Identities = 40/70 (57%), Positives = 46/70 (65%)
Query: 2 KLFGFGSRRGQTAHGSIEHVYTGSRYRIWDSELQKIHRAAVKGDAAGVECCLARRSGDLD 61
KLF FG R GQ S++ Y G Y I D EL+KIHRAA+KGDAA VE CL RR DLD
Sbjct: 110 KLFSFGRRLGQALLSSMDQEYAGPGYDIRDWELRKIHRAAIKGDAAEVERCLTRRFRDLD 169
Query: 62 APDKQHRVSL 71
A D++ R L
Sbjct: 170 ARDRKDRTVL 179
>gi|239755011 PREDICTED: ankyrin repeat domain 18B [Homo sapiens]
Length = 1363
Score = 73.6 bits (179), Expect = 3e-14
Identities = 39/70 (55%), Positives = 44/70 (62%)
Query: 2 KLFGFGSRRGQTAHGSIEHVYTGSRYRIWDSELQKIHRAAVKGDAAGVECCLARRSGDLD 61
KL FG R GQ S++ Y G Y I D EL+KIHRAA+KGDAA VE CL RR DLD
Sbjct: 102 KLLSFGRRLGQALLSSMDQEYAGRGYHIRDWELRKIHRAAIKGDAAEVEHCLTRRFRDLD 161
Query: 62 APDKQHRVSL 71
DK+ R L
Sbjct: 162 VRDKKDRTVL 171
>gi|239749555 PREDICTED: ankyrin repeat domain 18B [Homo sapiens]
Length = 1366
Score = 73.6 bits (179), Expect = 3e-14
Identities = 39/70 (55%), Positives = 44/70 (62%)
Query: 2 KLFGFGSRRGQTAHGSIEHVYTGSRYRIWDSELQKIHRAAVKGDAAGVECCLARRSGDLD 61
KL FG R GQ S++ Y G Y I D EL+KIHRAA+KGDAA VE CL RR DLD
Sbjct: 131 KLLSFGRRLGQALLSSMDQEYAGRGYHIRDWELRKIHRAAIKGDAAEVEHCLTRRFRDLD 190
Query: 62 APDKQHRVSL 71
DK+ R L
Sbjct: 191 VRDKKDRTVL 200
>gi|239743705 PREDICTED: ankyrin repeat domain 18B [Homo sapiens]
Length = 1139
Score = 72.4 bits (176), Expect = 7e-14
Identities = 38/70 (54%), Positives = 44/70 (62%)
Query: 2 KLFGFGSRRGQTAHGSIEHVYTGSRYRIWDSELQKIHRAAVKGDAAGVECCLARRSGDLD 61
KL FG R GQ S++ Y G Y I D EL+KIHRAA+KGDAA VE CL RR DLD
Sbjct: 131 KLLSFGRRLGQALLSSMDQEYAGRGYHIRDWELRKIHRAAIKGDAAEVEHCLTRRFRDLD 190
Query: 62 APDKQHRVSL 71
D++ R L
Sbjct: 191 VRDRKDRTVL 200
>gi|96975023 ankyrin repeat and death domain containing 1A [Homo
sapiens]
Length = 522
Score = 43.5 bits (101), Expect = 4e-05
Identities = 20/28 (71%), Positives = 23/28 (82%)
Query: 75 GWCPMAQSWLTATSACRVQAILLPQPPK 102
GW MA+S LTATSA RVQ IL+PQPP+
Sbjct: 495 GWSTMARSQLTATSASRVQMILVPQPPE 522
>gi|15011946 tripartite motif protein TRIM5 isoform delta [Homo
sapiens]
Length = 326
Score = 42.7 bits (99), Expect = 6e-05
Identities = 19/28 (67%), Positives = 22/28 (78%)
Query: 75 GWCPMAQSWLTATSACRVQAILLPQPPK 102
GW MA+S TATS ++QAILLPQPPK
Sbjct: 299 GWSAMARSRFTATSTSQIQAILLPQPPK 326
>gi|52353284 olfactory receptor, family 7, subfamily G, member 1
[Homo sapiens]
Length = 333
Score = 39.3 bits (90), Expect = 7e-04
Identities = 18/28 (64%), Positives = 22/28 (78%)
Query: 75 GWCPMAQSWLTATSACRVQAILLPQPPK 102
GW +A+S LTA SA RV AILLP+PP+
Sbjct: 306 GWSTVARSRLTANSASRVHAILLPRPPE 333
>gi|154354990 ankyrin repeat domain 26 [Homo sapiens]
Length = 1710
Score = 37.7 bits (86), Expect = 0.002
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 3 LFGFGSRRGQTAHGSIEH---VYTGSRYRIWDSELQKIHRAAVKGDAAGVECCLARRSGD 59
L F R+ +A G E Y+ Y + D +L KIH+AA G+ A V+ L R
Sbjct: 13 LGSFARRQRSSAGGGGEPGEGAYSQPGYHVRDRDLGKIHKAASAGNVAKVQQILLLRKNG 72
Query: 60 LDAPDKQHRVSL 71
L+ DK +R +L
Sbjct: 73 LNDRDKMNRTAL 84
>gi|7706194 proline rich 16 [Homo sapiens]
Length = 281
Score = 37.7 bits (86), Expect = 0.002
Identities = 19/22 (86%), Positives = 20/22 (90%)
Query: 79 MAQSWLTATSACRVQAILLPQP 100
MAQS LTATSA +VQAILLPQP
Sbjct: 1 MAQSGLTATSASQVQAILLPQP 22
>gi|218083233 chitinase domain containing 1 isoform b [Homo
sapiens]
Length = 418
Score = 37.4 bits (85), Expect = 0.003
Identities = 15/21 (71%), Positives = 17/21 (80%)
Query: 73 CPGWCPMAQSWLTATSACRVQ 93
CPGW MA+SWLTATSA + Q
Sbjct: 44 CPGWSAMARSWLTATSATQSQ 64
>gi|83627721 NIMA-related kinase 5 [Homo sapiens]
Length = 708
Score = 36.2 bits (82), Expect = 0.006
Identities = 14/17 (82%), Positives = 15/17 (88%)
Query: 73 CPGWCPMAQSWLTATSA 89
CPGW MA+SWLTATSA
Sbjct: 531 CPGWSAMARSWLTATSA 547
>gi|239756999 PREDICTED: ankyrin repeat domain 62 [Homo sapiens]
Length = 917
Score = 35.8 bits (81), Expect = 0.007
Identities = 18/51 (35%), Positives = 29/51 (56%)
Query: 22 YTGSRYRIWDSELQKIHRAAVKGDAAGVECCLARRSGDLDAPDKQHRVSLL 72
++ YR+ +L IH+AA+ GD V + R DL+ DK++R +LL
Sbjct: 27 FSNPGYRVRQKDLGMIHKAAIAGDVNKVMESILLRLNDLNDRDKKNRTALL 77
>gi|239751514 PREDICTED: ankyrin repeat domain 62 isoform 4 [Homo
sapiens]
Length = 917
Score = 35.8 bits (81), Expect = 0.007
Identities = 18/51 (35%), Positives = 29/51 (56%)
Query: 22 YTGSRYRIWDSELQKIHRAAVKGDAAGVECCLARRSGDLDAPDKQHRVSLL 72
++ YR+ +L IH+AA+ GD V + R DL+ DK++R +LL
Sbjct: 27 FSNPGYRVRQKDLGMIHKAAIAGDVNKVMESILLRLNDLNDRDKKNRTALL 77
>gi|239746016 PREDICTED: ankyrin repeat domain 62 isoform 1 [Homo
sapiens]
Length = 917
Score = 35.8 bits (81), Expect = 0.007
Identities = 18/51 (35%), Positives = 29/51 (56%)
Query: 22 YTGSRYRIWDSELQKIHRAAVKGDAAGVECCLARRSGDLDAPDKQHRVSLL 72
++ YR+ +L IH+AA+ GD V + R DL+ DK++R +LL
Sbjct: 27 FSNPGYRVRQKDLGMIHKAAIAGDVNKVMESILLRLNDLNDRDKKNRTALL 77
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.323 0.135 0.448
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,323,096
Number of Sequences: 37866
Number of extensions: 157962
Number of successful extensions: 405
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 338
Number of HSP's gapped (non-prelim): 70
length of query: 102
length of database: 18,247,518
effective HSP length: 73
effective length of query: 29
effective length of database: 15,483,300
effective search space: 449015700
effective search space used: 449015700
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.