Guide to the Human Genome
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Search of human proteins with 169165432

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|169165432 PREDICTED: similar to FLJ00274 protein [Homo
sapiens]
         (176 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169165432 PREDICTED: similar to FLJ00274 protein [Homo sapiens]    360   e-100
gi|169165807 PREDICTED: similar to FLJ00274 protein [Homo sapiens]    360   e-100
gi|169164989 PREDICTED: similar to FLJ00274 protein [Homo sapiens]    360   e-100
gi|194018497 FYVE, RhoGEF and PH domain containing 5 [Homo sapiens]   264   3e-71
gi|88501738 TRIO and F-actin binding protein isoform 6 [Homo sap...    31   0.63 
gi|21071060 SWI/SNF-related matrix-associated actin-dependent re...    30   1.1  
gi|187761314 SWI/SNF-related matrix-associated actin-dependent r...    30   1.1  
gi|42734325 wings apart-like homolog [Homo sapiens]                    30   1.1  
gi|54607027 integrin beta 4 isoform 2 precursor [Homo sapiens]         30   1.4  
gi|54607035 integrin beta 4 isoform 1 precursor [Homo sapiens]         30   1.4  
gi|54607033 integrin beta 4 isoform 3 precursor [Homo sapiens]         30   1.4  
gi|50897856 hypothetical protein LOC220965 isoform 1 [Homo sapiens]    29   1.8  
gi|50897854 hypothetical protein LOC220965 isoform 2 [Homo sapiens]    29   1.8  
gi|38026934 Rho guanine nucleotide exchange factor (GEF) 11 isof...    28   3.1  
gi|7662086 Rho guanine nucleotide exchange factor (GEF) 11 isofo...    28   3.1  
gi|9966883 protocadherin 9 isoform 2 precursor [Homo sapiens]          28   4.1  
gi|45243534 protocadherin 9 isoform 1 precursor [Homo sapiens]         28   4.1  
gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens]              28   4.1  
gi|113204617 skeletal muscle ryanodine receptor isoform 2 [Homo ...    28   5.4  
gi|113204615 skeletal muscle ryanodine receptor isoform 1 [Homo ...    28   5.4  
gi|226442779 jumonji domain containing 1A [Homo sapiens]               28   5.4  
gi|20357522 jumonji domain containing 1A [Homo sapiens]                28   5.4  
gi|187829452 autism susceptibility candidate 2 isoform 2 [Homo s...    28   5.4  
gi|17864090 autism susceptibility candidate 2 isoform 1 [Homo sa...    28   5.4  
gi|156546888 F-box protein 40 [Homo sapiens]                           28   5.4  
gi|239757584 PREDICTED: similar to SH3-binding domain and glutam...    27   7.0  
gi|22538387 A-kinase anchor protein 9 isoform 2 [Homo sapiens]         27   7.0  
gi|22538393 A-kinase anchor protein 9 isoform 3 [Homo sapiens]         27   7.0  
gi|32130516 serologically defined colon cancer antigen 1 [Homo s...    27   7.0  
gi|11545835 TSPY-like 2 [Homo sapiens]                                 27   7.0  

>gi|169165432 PREDICTED: similar to FLJ00274 protein [Homo sapiens]
          Length = 176

 Score =  360 bits (923), Expect = e-100
 Identities = 176/176 (100%), Positives = 176/176 (100%)

Query: 1   MNSPEVLEEGCEEATGVIGGEQVDLGELPDHEEKSNQKVAAATLEDRTQDEPAEESCQIV 60
           MNSPEVLEEGCEEATGVIGGEQVDLGELPDHEEKSNQKVAAATLEDRTQDEPAEESCQIV
Sbjct: 1   MNSPEVLEEGCEEATGVIGGEQVDLGELPDHEEKSNQKVAAATLEDRTQDEPAEESCQIV 60

Query: 61  LFQNNCMDNFVTSLTGSPYEFFPTKSTSFCRESCSPFSESVKSLESEQAPKLGLCAEEDP 120
           LFQNNCMDNFVTSLTGSPYEFFPTKSTSFCRESCSPFSESVKSLESEQAPKLGLCAEEDP
Sbjct: 61  LFQNNCMDNFVTSLTGSPYEFFPTKSTSFCRESCSPFSESVKSLESEQAPKLGLCAEEDP 120

Query: 121 VVGALCGQHGPLQDGVAEGPTAPDVVVLPKEEEKEEVIVDDMLANPYVMGVGLLGG 176
           VVGALCGQHGPLQDGVAEGPTAPDVVVLPKEEEKEEVIVDDMLANPYVMGVGLLGG
Sbjct: 121 VVGALCGQHGPLQDGVAEGPTAPDVVVLPKEEEKEEVIVDDMLANPYVMGVGLLGG 176


>gi|169165807 PREDICTED: similar to FLJ00274 protein [Homo sapiens]
          Length = 176

 Score =  360 bits (923), Expect = e-100
 Identities = 176/176 (100%), Positives = 176/176 (100%)

Query: 1   MNSPEVLEEGCEEATGVIGGEQVDLGELPDHEEKSNQKVAAATLEDRTQDEPAEESCQIV 60
           MNSPEVLEEGCEEATGVIGGEQVDLGELPDHEEKSNQKVAAATLEDRTQDEPAEESCQIV
Sbjct: 1   MNSPEVLEEGCEEATGVIGGEQVDLGELPDHEEKSNQKVAAATLEDRTQDEPAEESCQIV 60

Query: 61  LFQNNCMDNFVTSLTGSPYEFFPTKSTSFCRESCSPFSESVKSLESEQAPKLGLCAEEDP 120
           LFQNNCMDNFVTSLTGSPYEFFPTKSTSFCRESCSPFSESVKSLESEQAPKLGLCAEEDP
Sbjct: 61  LFQNNCMDNFVTSLTGSPYEFFPTKSTSFCRESCSPFSESVKSLESEQAPKLGLCAEEDP 120

Query: 121 VVGALCGQHGPLQDGVAEGPTAPDVVVLPKEEEKEEVIVDDMLANPYVMGVGLLGG 176
           VVGALCGQHGPLQDGVAEGPTAPDVVVLPKEEEKEEVIVDDMLANPYVMGVGLLGG
Sbjct: 121 VVGALCGQHGPLQDGVAEGPTAPDVVVLPKEEEKEEVIVDDMLANPYVMGVGLLGG 176


>gi|169164989 PREDICTED: similar to FLJ00274 protein [Homo sapiens]
          Length = 176

 Score =  360 bits (923), Expect = e-100
 Identities = 176/176 (100%), Positives = 176/176 (100%)

Query: 1   MNSPEVLEEGCEEATGVIGGEQVDLGELPDHEEKSNQKVAAATLEDRTQDEPAEESCQIV 60
           MNSPEVLEEGCEEATGVIGGEQVDLGELPDHEEKSNQKVAAATLEDRTQDEPAEESCQIV
Sbjct: 1   MNSPEVLEEGCEEATGVIGGEQVDLGELPDHEEKSNQKVAAATLEDRTQDEPAEESCQIV 60

Query: 61  LFQNNCMDNFVTSLTGSPYEFFPTKSTSFCRESCSPFSESVKSLESEQAPKLGLCAEEDP 120
           LFQNNCMDNFVTSLTGSPYEFFPTKSTSFCRESCSPFSESVKSLESEQAPKLGLCAEEDP
Sbjct: 61  LFQNNCMDNFVTSLTGSPYEFFPTKSTSFCRESCSPFSESVKSLESEQAPKLGLCAEEDP 120

Query: 121 VVGALCGQHGPLQDGVAEGPTAPDVVVLPKEEEKEEVIVDDMLANPYVMGVGLLGG 176
           VVGALCGQHGPLQDGVAEGPTAPDVVVLPKEEEKEEVIVDDMLANPYVMGVGLLGG
Sbjct: 121 VVGALCGQHGPLQDGVAEGPTAPDVVVLPKEEEKEEVIVDDMLANPYVMGVGLLGG 176


>gi|194018497 FYVE, RhoGEF and PH domain containing 5 [Homo sapiens]
          Length = 1462

 Score =  264 bits (674), Expect = 3e-71
 Identities = 133/172 (77%), Positives = 146/172 (84%), Gaps = 5/172 (2%)

Query: 4   PEVLEEGCEEATGVIGGEQVDLGELPDHEEKSNQKVAAATLEDRTQDEPAEESCQIVLFQ 63
           PEVLEEGCEEATGV GGEQVDL E PDHE+K+NQ+VAAATLED  QDE AEESCQIV F+
Sbjct: 272 PEVLEEGCEEATGVTGGEQVDLSEPPDHEKKTNQEVAAATLEDHAQDESAEESCQIVPFE 331

Query: 64  NNCMDNFVTSLTGSPYEFFPTKSTSFCRESCSPFSESVKSLESEQAPKLGLCAEEDPVVG 123
           N+CM++FVTSLTGSPYEFFPT+STSFC ESCSP SES K LESEQAPKLGL AEE+P+VG
Sbjct: 332 NDCMEDFVTSLTGSPYEFFPTESTSFCSESCSPLSESAKGLESEQAPKLGLRAEENPMVG 391

Query: 124 ALCGQHGPLQDGVAEGPTAPDVVVLPKEEEKEEVIVDDMLANPYVMGVGLLG 175
           ALCGQ G LQ G AEGP APDVVV+ +EE      +DD LANPYVMGVGL G
Sbjct: 392 ALCGQCGSLQGGAAEGPAAPDVVVVLEEE-----ALDDALANPYVMGVGLPG 438


>gi|88501738 TRIO and F-actin binding protein isoform 6 [Homo sapiens]
          Length = 2365

 Score = 30.8 bits (68), Expect = 0.63
 Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 5/80 (6%)

Query: 80   EFFPTKSTSFCRESCSPFSESVKSLESEQAPKLGLCAEEDPVVGALCG--QHGPLQD-GV 136
            E  P    S   +S SP      +  S Q PK+ +     P    L G  Q GPL     
Sbjct: 1635 EATPVNGHSPALQSQSPVQLPSPACTSTQWPKIKVT--RGPATATLAGLEQTGPLGSRST 1692

Query: 137  AEGPTAPDVVVLPKEEEKEE 156
            A+GP+ P++   P+E E+ E
Sbjct: 1693 AKGPSLPELQFQPEEPEESE 1712


>gi|21071060 SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin a-like 1 [Homo sapiens]
          Length = 954

 Score = 30.0 bits (66), Expect = 1.1
 Identities = 28/104 (26%), Positives = 42/104 (40%), Gaps = 21/104 (20%)

Query: 72  TSLTGSPYEFFPTKSTSFCRESCSPFSESV----KSLESE-------------QAPKLGL 114
           TS+ G+P++     S +F RESC P S  V    ++L S              QA  +  
Sbjct: 40  TSIAGNPFQAKQGPSQNFPRESCKPVSHGVIFKQQNLSSSSNADQRPHDSHSFQAKGIWK 99

Query: 115 CAEEDPVVGALCGQHGPLQDGVAEGPTAPDVVVLPKEEEKEEVI 158
             EE P     C  H P       G  +P +   P E  K++++
Sbjct: 100 KPEEMPTA---CPGHSPRSQMALTG-ISPPLAQSPPEVPKQQLL 139


>gi|187761314 SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin a-like 1 [Homo sapiens]
          Length = 954

 Score = 30.0 bits (66), Expect = 1.1
 Identities = 28/104 (26%), Positives = 42/104 (40%), Gaps = 21/104 (20%)

Query: 72  TSLTGSPYEFFPTKSTSFCRESCSPFSESV----KSLESE-------------QAPKLGL 114
           TS+ G+P++     S +F RESC P S  V    ++L S              QA  +  
Sbjct: 40  TSIAGNPFQAKQGPSQNFPRESCKPVSHGVIFKQQNLSSSSNADQRPHDSHSFQAKGIWK 99

Query: 115 CAEEDPVVGALCGQHGPLQDGVAEGPTAPDVVVLPKEEEKEEVI 158
             EE P     C  H P       G  +P +   P E  K++++
Sbjct: 100 KPEEMPTA---CPGHSPRSQMALTG-ISPPLAQSPPEVPKQQLL 139


>gi|42734325 wings apart-like homolog [Homo sapiens]
          Length = 1190

 Score = 30.0 bits (66), Expect = 1.1
 Identities = 26/100 (26%), Positives = 40/100 (40%), Gaps = 27/100 (27%)

Query: 75  TGSPYEF------FPTKSTSFCRESCSPFSESVKSLESEQA-------PKLGLCAEEDPV 121
           TG P+ F       P  S +  +  CS +SES ++ + E+         K+     ED V
Sbjct: 69  TGDPFGFDSDDESLPVSSKNLAQVKCSSYSESSEAAQLEEVTSVLEANSKISHVVVEDTV 128

Query: 122 VGALCGQHGPLQDGVAEGPTAPDVVVLPKEEEKEEVIVDD 161
           V   C    PL+D            +L KE+    ++ DD
Sbjct: 129 VSDKC---FPLED-----------TLLGKEKSTNRIVEDD 154


>gi|54607027 integrin beta 4 isoform 2 precursor [Homo sapiens]
          Length = 1805

 Score = 29.6 bits (65), Expect = 1.4
 Identities = 26/106 (24%), Positives = 47/106 (44%), Gaps = 5/106 (4%)

Query: 20  GEQVDLGELPDHEEKSNQKVAAATLEDRTQDEPAEESCQIVLFQNNCMDNF-VTSLTGSP 78
           G  V  G +  ++E+ +        + RTQD P+  +   +L ++N +  F VT+ + S 
Sbjct: 273 GANVLAGIMSRNDERCHLDTTGTYTQYRTQDYPSVPTLVRLLAKHNIIPIFAVTNYSYSY 332

Query: 79  YE----FFPTKSTSFCRESCSPFSESVKSLESEQAPKLGLCAEEDP 120
           YE    +FP  S    +E  S   E ++   +     L + A + P
Sbjct: 333 YEKLHTYFPVSSLGVLQEDSSNIVELLEEAFNRIRSNLDIRALDSP 378


>gi|54607035 integrin beta 4 isoform 1 precursor [Homo sapiens]
          Length = 1822

 Score = 29.6 bits (65), Expect = 1.4
 Identities = 26/106 (24%), Positives = 47/106 (44%), Gaps = 5/106 (4%)

Query: 20  GEQVDLGELPDHEEKSNQKVAAATLEDRTQDEPAEESCQIVLFQNNCMDNF-VTSLTGSP 78
           G  V  G +  ++E+ +        + RTQD P+  +   +L ++N +  F VT+ + S 
Sbjct: 273 GANVLAGIMSRNDERCHLDTTGTYTQYRTQDYPSVPTLVRLLAKHNIIPIFAVTNYSYSY 332

Query: 79  YE----FFPTKSTSFCRESCSPFSESVKSLESEQAPKLGLCAEEDP 120
           YE    +FP  S    +E  S   E ++   +     L + A + P
Sbjct: 333 YEKLHTYFPVSSLGVLQEDSSNIVELLEEAFNRIRSNLDIRALDSP 378


>gi|54607033 integrin beta 4 isoform 3 precursor [Homo sapiens]
          Length = 1752

 Score = 29.6 bits (65), Expect = 1.4
 Identities = 26/106 (24%), Positives = 47/106 (44%), Gaps = 5/106 (4%)

Query: 20  GEQVDLGELPDHEEKSNQKVAAATLEDRTQDEPAEESCQIVLFQNNCMDNF-VTSLTGSP 78
           G  V  G +  ++E+ +        + RTQD P+  +   +L ++N +  F VT+ + S 
Sbjct: 273 GANVLAGIMSRNDERCHLDTTGTYTQYRTQDYPSVPTLVRLLAKHNIIPIFAVTNYSYSY 332

Query: 79  YE----FFPTKSTSFCRESCSPFSESVKSLESEQAPKLGLCAEEDP 120
           YE    +FP  S    +E  S   E ++   +     L + A + P
Sbjct: 333 YEKLHTYFPVSSLGVLQEDSSNIVELLEEAFNRIRSNLDIRALDSP 378


>gi|50897856 hypothetical protein LOC220965 isoform 1 [Homo sapiens]
          Length = 585

 Score = 29.3 bits (64), Expect = 1.8
 Identities = 30/116 (25%), Positives = 47/116 (40%), Gaps = 11/116 (9%)

Query: 11  CEEATGVIGGEQVDLGELPDHEEKSNQKVAAATLEDRTQD--EPAEESCQIVLFQNN--- 65
           C+E    +  +Q D   L D   K N   A A +E+      EP +++ +  +  ++   
Sbjct: 22  CDEDPVSLHEDQTDCSSLRDENNKENYPDAGALVEEHAPPSWEPQQQNVEATVLVDSVLR 81

Query: 66  -CMDNFVTSLTGSPYEFFPTKSTSFCRESCSPFSESVKSLESEQAPKLGLCAEEDP 120
             M NF +     P   F  +S     ES    +E V S +SE   + G  A E P
Sbjct: 82  PSMGNFKSR---KPKSIFKAESGRSHGESQE--TEHVVSSQSECQVRAGTPAHESP 132


>gi|50897854 hypothetical protein LOC220965 isoform 2 [Homo sapiens]
          Length = 487

 Score = 29.3 bits (64), Expect = 1.8
 Identities = 30/116 (25%), Positives = 47/116 (40%), Gaps = 11/116 (9%)

Query: 11  CEEATGVIGGEQVDLGELPDHEEKSNQKVAAATLEDRTQD--EPAEESCQIVLFQNN--- 65
           C+E    +  +Q D   L D   K N   A A +E+      EP +++ +  +  ++   
Sbjct: 22  CDEDPVSLHEDQTDCSSLRDENNKENYPDAGALVEEHAPPSWEPQQQNVEATVLVDSVLR 81

Query: 66  -CMDNFVTSLTGSPYEFFPTKSTSFCRESCSPFSESVKSLESEQAPKLGLCAEEDP 120
             M NF +     P   F  +S     ES    +E V S +SE   + G  A E P
Sbjct: 82  PSMGNFKSR---KPKSIFKAESGRSHGESQE--TEHVVSSQSECQVRAGTPAHESP 132


>gi|38026934 Rho guanine nucleotide exchange factor (GEF) 11 isoform 2
            [Homo sapiens]
          Length = 1562

 Score = 28.5 bits (62), Expect = 3.1
 Identities = 17/67 (25%), Positives = 31/67 (46%), Gaps = 8/67 (11%)

Query: 77   SPYEFFPTKSTSFCRESCSPFSESVKSLESEQAPKLGLCAEEDPVVGALCGQHGPLQDGV 136
            +P   F T++  +   S SP ++   + +S  + +LG C E+        G   PL+D  
Sbjct: 1502 TPVGSFHTEAARWTDGSLSPPAKEPLASDSRNSHELGPCPED--------GSDAPLEDST 1553

Query: 137  AEGPTAP 143
            A+   +P
Sbjct: 1554 ADAAASP 1560


>gi|7662086 Rho guanine nucleotide exchange factor (GEF) 11 isoform 1
            [Homo sapiens]
          Length = 1522

 Score = 28.5 bits (62), Expect = 3.1
 Identities = 17/67 (25%), Positives = 31/67 (46%), Gaps = 8/67 (11%)

Query: 77   SPYEFFPTKSTSFCRESCSPFSESVKSLESEQAPKLGLCAEEDPVVGALCGQHGPLQDGV 136
            +P   F T++  +   S SP ++   + +S  + +LG C E+        G   PL+D  
Sbjct: 1462 TPVGSFHTEAARWTDGSLSPPAKEPLASDSRNSHELGPCPED--------GSDAPLEDST 1513

Query: 137  AEGPTAP 143
            A+   +P
Sbjct: 1514 ADAAASP 1520


>gi|9966883 protocadherin 9 isoform 2 precursor [Homo sapiens]
          Length = 1203

 Score = 28.1 bits (61), Expect = 4.1
 Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 4/62 (6%)

Query: 50  DEPAEESCQIVLFQNNCMDNFVTSLTGSPYEFFPTKSTSFCRESCSPFSESVKSLESEQA 109
           D  A E+  + L   N  DNFV      PY      + SF RE  S ++  VK+ +  Q 
Sbjct: 598 DADAGENKAVTLSILNDNDNFVLD----PYSGVIKSNVSFDREQQSSYTFDVKATDGGQP 653

Query: 110 PK 111
           P+
Sbjct: 654 PR 655


>gi|45243534 protocadherin 9 isoform 1 precursor [Homo sapiens]
          Length = 1237

 Score = 28.1 bits (61), Expect = 4.1
 Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 4/62 (6%)

Query: 50  DEPAEESCQIVLFQNNCMDNFVTSLTGSPYEFFPTKSTSFCRESCSPFSESVKSLESEQA 109
           D  A E+  + L   N  DNFV      PY      + SF RE  S ++  VK+ +  Q 
Sbjct: 598 DADAGENKAVTLSILNDNDNFVLD----PYSGVIKSNVSFDREQQSSYTFDVKATDGGQP 653

Query: 110 PK 111
           P+
Sbjct: 654 PR 655


>gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens]
          Length = 2400

 Score = 28.1 bits (61), Expect = 4.1
 Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 8/65 (12%)

Query: 92   ESCSPFSESVKSLESEQAPKLGLCAEEDPVVGALCGQHGPLQDGVAEGPTAPDVVVLPKE 151
            +   P +ESV++LE+E         E++P       Q        AEG T P+  V+  +
Sbjct: 1913 KEAQPETESVEALETE--------GEDEPESEGAEAQEAEEAAQEAEGQTQPESEVIESQ 1964

Query: 152  EEKEE 156
            E +EE
Sbjct: 1965 EAEEE 1969


>gi|113204617 skeletal muscle ryanodine receptor isoform 2 [Homo
            sapiens]
          Length = 5033

 Score = 27.7 bits (60), Expect = 5.4
 Identities = 31/116 (26%), Positives = 47/116 (40%), Gaps = 3/116 (2%)

Query: 1    MNSPEVLEEGCEEATGVIGGEQVDLGEL-PDHEEKSNQKVAAATLEDRTQDEPAEESCQI 59
            M  PEV  E  EE      GE+ D  E   D EE + +K      E+   +   EE  + 
Sbjct: 1865 MIEPEVFTEEEEEEDEEEEGEEEDEEEKEEDEEETAQEKEDEEKEEEEAAEGEKEEGLEE 1924

Query: 60   VLFQNNCMDNFVTSLTGSPYEFFPTKSTSFCRESCSPFSES-VKSLESEQAPKLGL 114
             L Q    ++    +     E+F  +      ES + F+E  V  L++ Q  + GL
Sbjct: 1925 GLLQMKLPESVKLQMC-HLLEYFCDQELQHRVESLAAFAERYVDKLQANQRSRYGL 1979


>gi|113204615 skeletal muscle ryanodine receptor isoform 1 [Homo
            sapiens]
          Length = 5038

 Score = 27.7 bits (60), Expect = 5.4
 Identities = 31/116 (26%), Positives = 47/116 (40%), Gaps = 3/116 (2%)

Query: 1    MNSPEVLEEGCEEATGVIGGEQVDLGEL-PDHEEKSNQKVAAATLEDRTQDEPAEESCQI 59
            M  PEV  E  EE      GE+ D  E   D EE + +K      E+   +   EE  + 
Sbjct: 1865 MIEPEVFTEEEEEEDEEEEGEEEDEEEKEEDEEETAQEKEDEEKEEEEAAEGEKEEGLEE 1924

Query: 60   VLFQNNCMDNFVTSLTGSPYEFFPTKSTSFCRESCSPFSES-VKSLESEQAPKLGL 114
             L Q    ++    +     E+F  +      ES + F+E  V  L++ Q  + GL
Sbjct: 1925 GLLQMKLPESVKLQMC-HLLEYFCDQELQHRVESLAAFAERYVDKLQANQRSRYGL 1979


>gi|226442779 jumonji domain containing 1A [Homo sapiens]
          Length = 1321

 Score = 27.7 bits (60), Expect = 5.4
 Identities = 16/48 (33%), Positives = 24/48 (50%)

Query: 63  QNNCMDNFVTSLTGSPYEFFPTKSTSFCRESCSPFSESVKSLESEQAP 110
           Q N +++   +LTG P E  PTK++S      +   E  K LE   +P
Sbjct: 399 QENRLESVPQALTGLPKECLPTKASSKAELEIANPPELQKHLEHAPSP 446


>gi|20357522 jumonji domain containing 1A [Homo sapiens]
          Length = 1321

 Score = 27.7 bits (60), Expect = 5.4
 Identities = 16/48 (33%), Positives = 24/48 (50%)

Query: 63  QNNCMDNFVTSLTGSPYEFFPTKSTSFCRESCSPFSESVKSLESEQAP 110
           Q N +++   +LTG P E  PTK++S      +   E  K LE   +P
Sbjct: 399 QENRLESVPQALTGLPKECLPTKASSKAELEIANPPELQKHLEHAPSP 446


>gi|187829452 autism susceptibility candidate 2 isoform 2 [Homo
           sapiens]
          Length = 1235

 Score = 27.7 bits (60), Expect = 5.4
 Identities = 28/120 (23%), Positives = 45/120 (37%), Gaps = 16/120 (13%)

Query: 63  QNNCMDNFVTSLTGSPYEFFPTKSTSFCRESCSPFSESVKSL---ESEQAPKLGLCAEE- 118
           QN+C D+   S +G    F  + S     +S +P S         +S+Q  K    + E 
Sbjct: 179 QNSCRDSDSESASGESKGFHRSSSRERLSDSSAPSSLGTGYFCDSDSDQEEKASDASSEK 238

Query: 119 ---------DPVVGALCGQHGPLQDGVAEGPTAPDVVVLPKEEEKEEVIVDDMLANPYVM 169
                    DP +G       P  D    GP  P +  L + +EK +    + +  P V+
Sbjct: 239 LFNTVIVNKDPELGV---GTLPEHDSQDAGPIVPKISGLERSQEKSQDCCKEPIFEPVVL 295


>gi|17864090 autism susceptibility candidate 2 isoform 1 [Homo
           sapiens]
          Length = 1259

 Score = 27.7 bits (60), Expect = 5.4
 Identities = 28/120 (23%), Positives = 45/120 (37%), Gaps = 16/120 (13%)

Query: 63  QNNCMDNFVTSLTGSPYEFFPTKSTSFCRESCSPFSESVKSL---ESEQAPKLGLCAEE- 118
           QN+C D+   S +G    F  + S     +S +P S         +S+Q  K    + E 
Sbjct: 179 QNSCRDSDSESASGESKGFHRSSSRERLSDSSAPSSLGTGYFCDSDSDQEEKASDASSEK 238

Query: 119 ---------DPVVGALCGQHGPLQDGVAEGPTAPDVVVLPKEEEKEEVIVDDMLANPYVM 169
                    DP +G       P  D    GP  P +  L + +EK +    + +  P V+
Sbjct: 239 LFNTVIVNKDPELGV---GTLPEHDSQDAGPIVPKISGLERSQEKSQDCCKEPIFEPVVL 295


>gi|156546888 F-box protein 40 [Homo sapiens]
          Length = 709

 Score = 27.7 bits (60), Expect = 5.4
 Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 2/55 (3%)

Query: 8   EEGCEEATGVIGGEQVDLGELPDHEEKSNQKVAAATLEDRTQDEPAEESCQIVLF 62
           E   EE  G +GG  VD+G +P     +N ++A  + E+R      +E   +V F
Sbjct: 163 ETSVEEMGGAVGG--VDIGLVPHGLSATNGEMAELSQEEREVLAKTKEGMDLVKF 215


>gi|239757584 PREDICTED: similar to SH3-binding domain and glutamic
           acid-rich protein [Homo sapiens]
          Length = 218

 Score = 27.3 bits (59), Expect = 7.0
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)

Query: 5   EVLEEGCEEATGVIGGEQVDLGELPDHEEKSNQKVAAATLEDRT 48
           E  EEG E      G E  D+G LP+ +EK+ ++   AT E R+
Sbjct: 170 EKAEEGGETEAQKEGSE--DVGNLPEAQEKNEEEGETATEEVRS 211


>gi|22538387 A-kinase anchor protein 9 isoform 2 [Homo sapiens]
          Length = 3907

 Score = 27.3 bits (59), Expect = 7.0
 Identities = 10/36 (27%), Positives = 23/36 (63%)

Query: 22   QVDLGELPDHEEKSNQKVAAATLEDRTQDEPAEESC 57
            Q DL ++ DH  ++ +K++    ED T+ + ++++C
Sbjct: 2730 QKDLSQVRDHLAEAKEKLSILEKEDETEVQESKKAC 2765


>gi|22538393 A-kinase anchor protein 9 isoform 3 [Homo sapiens]
          Length = 3899

 Score = 27.3 bits (59), Expect = 7.0
 Identities = 10/36 (27%), Positives = 23/36 (63%)

Query: 22   QVDLGELPDHEEKSNQKVAAATLEDRTQDEPAEESC 57
            Q DL ++ DH  ++ +K++    ED T+ + ++++C
Sbjct: 2722 QKDLSQVRDHLAEAKEKLSILEKEDETEVQESKKAC 2757


>gi|32130516 serologically defined colon cancer antigen 1 [Homo
            sapiens]
          Length = 1076

 Score = 27.3 bits (59), Expect = 7.0
 Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 3/61 (4%)

Query: 38   KVAAATLEDRTQDEPAEESCQIVLFQNNCMDNFVTSLTGSPYEFFPTKSTSFCRESCSPF 97
            +V    L+D   D+P ++  +  L Q    +N   SLTG P+   P     F    C+P+
Sbjct: 947  EVITHELQDFAVDDPHDDKEEQDLDQQGNEENLFDSLTGQPH---PEDVLLFAIPICAPY 1003

Query: 98   S 98
            +
Sbjct: 1004 T 1004


>gi|11545835 TSPY-like 2 [Homo sapiens]
          Length = 693

 Score = 27.3 bits (59), Expect = 7.0
 Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 1/66 (1%)

Query: 96  PFSESVKSLESEQAPKLGLCAEEDPVVGALCGQHGPLQDGVAEGPTAPDVVVLPKEEEKE 155
           P +ES+++L + +A    L  +   V  +  G  G L+   A G  AP  +V PK +E+ 
Sbjct: 110 PPTESLEALPTPEASGGSLEIDFQVVQSSSFGGEGALETCSAVG-WAPQRLVDPKSKEEA 168

Query: 156 EVIVDD 161
            +IV+D
Sbjct: 169 IIIVED 174


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.310    0.131    0.381 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,807,804
Number of Sequences: 37866
Number of extensions: 376237
Number of successful extensions: 871
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 858
Number of HSP's gapped (non-prelim): 36
length of query: 176
length of database: 18,247,518
effective HSP length: 95
effective length of query: 81
effective length of database: 14,650,248
effective search space: 1186670088
effective search space used: 1186670088
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 58 (26.9 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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