BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|169165432 PREDICTED: similar to FLJ00274 protein [Homo sapiens] (176 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|169165432 PREDICTED: similar to FLJ00274 protein [Homo sapiens] 360 e-100 gi|169165807 PREDICTED: similar to FLJ00274 protein [Homo sapiens] 360 e-100 gi|169164989 PREDICTED: similar to FLJ00274 protein [Homo sapiens] 360 e-100 gi|194018497 FYVE, RhoGEF and PH domain containing 5 [Homo sapiens] 264 3e-71 gi|88501738 TRIO and F-actin binding protein isoform 6 [Homo sap... 31 0.63 gi|21071060 SWI/SNF-related matrix-associated actin-dependent re... 30 1.1 gi|187761314 SWI/SNF-related matrix-associated actin-dependent r... 30 1.1 gi|42734325 wings apart-like homolog [Homo sapiens] 30 1.1 gi|54607027 integrin beta 4 isoform 2 precursor [Homo sapiens] 30 1.4 gi|54607035 integrin beta 4 isoform 1 precursor [Homo sapiens] 30 1.4 gi|54607033 integrin beta 4 isoform 3 precursor [Homo sapiens] 30 1.4 gi|50897856 hypothetical protein LOC220965 isoform 1 [Homo sapiens] 29 1.8 gi|50897854 hypothetical protein LOC220965 isoform 2 [Homo sapiens] 29 1.8 gi|38026934 Rho guanine nucleotide exchange factor (GEF) 11 isof... 28 3.1 gi|7662086 Rho guanine nucleotide exchange factor (GEF) 11 isofo... 28 3.1 gi|9966883 protocadherin 9 isoform 2 precursor [Homo sapiens] 28 4.1 gi|45243534 protocadherin 9 isoform 1 precursor [Homo sapiens] 28 4.1 gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens] 28 4.1 gi|113204617 skeletal muscle ryanodine receptor isoform 2 [Homo ... 28 5.4 gi|113204615 skeletal muscle ryanodine receptor isoform 1 [Homo ... 28 5.4 gi|226442779 jumonji domain containing 1A [Homo sapiens] 28 5.4 gi|20357522 jumonji domain containing 1A [Homo sapiens] 28 5.4 gi|187829452 autism susceptibility candidate 2 isoform 2 [Homo s... 28 5.4 gi|17864090 autism susceptibility candidate 2 isoform 1 [Homo sa... 28 5.4 gi|156546888 F-box protein 40 [Homo sapiens] 28 5.4 gi|239757584 PREDICTED: similar to SH3-binding domain and glutam... 27 7.0 gi|22538387 A-kinase anchor protein 9 isoform 2 [Homo sapiens] 27 7.0 gi|22538393 A-kinase anchor protein 9 isoform 3 [Homo sapiens] 27 7.0 gi|32130516 serologically defined colon cancer antigen 1 [Homo s... 27 7.0 gi|11545835 TSPY-like 2 [Homo sapiens] 27 7.0 >gi|169165432 PREDICTED: similar to FLJ00274 protein [Homo sapiens] Length = 176 Score = 360 bits (923), Expect = e-100 Identities = 176/176 (100%), Positives = 176/176 (100%) Query: 1 MNSPEVLEEGCEEATGVIGGEQVDLGELPDHEEKSNQKVAAATLEDRTQDEPAEESCQIV 60 MNSPEVLEEGCEEATGVIGGEQVDLGELPDHEEKSNQKVAAATLEDRTQDEPAEESCQIV Sbjct: 1 MNSPEVLEEGCEEATGVIGGEQVDLGELPDHEEKSNQKVAAATLEDRTQDEPAEESCQIV 60 Query: 61 LFQNNCMDNFVTSLTGSPYEFFPTKSTSFCRESCSPFSESVKSLESEQAPKLGLCAEEDP 120 LFQNNCMDNFVTSLTGSPYEFFPTKSTSFCRESCSPFSESVKSLESEQAPKLGLCAEEDP Sbjct: 61 LFQNNCMDNFVTSLTGSPYEFFPTKSTSFCRESCSPFSESVKSLESEQAPKLGLCAEEDP 120 Query: 121 VVGALCGQHGPLQDGVAEGPTAPDVVVLPKEEEKEEVIVDDMLANPYVMGVGLLGG 176 VVGALCGQHGPLQDGVAEGPTAPDVVVLPKEEEKEEVIVDDMLANPYVMGVGLLGG Sbjct: 121 VVGALCGQHGPLQDGVAEGPTAPDVVVLPKEEEKEEVIVDDMLANPYVMGVGLLGG 176 >gi|169165807 PREDICTED: similar to FLJ00274 protein [Homo sapiens] Length = 176 Score = 360 bits (923), Expect = e-100 Identities = 176/176 (100%), Positives = 176/176 (100%) Query: 1 MNSPEVLEEGCEEATGVIGGEQVDLGELPDHEEKSNQKVAAATLEDRTQDEPAEESCQIV 60 MNSPEVLEEGCEEATGVIGGEQVDLGELPDHEEKSNQKVAAATLEDRTQDEPAEESCQIV Sbjct: 1 MNSPEVLEEGCEEATGVIGGEQVDLGELPDHEEKSNQKVAAATLEDRTQDEPAEESCQIV 60 Query: 61 LFQNNCMDNFVTSLTGSPYEFFPTKSTSFCRESCSPFSESVKSLESEQAPKLGLCAEEDP 120 LFQNNCMDNFVTSLTGSPYEFFPTKSTSFCRESCSPFSESVKSLESEQAPKLGLCAEEDP Sbjct: 61 LFQNNCMDNFVTSLTGSPYEFFPTKSTSFCRESCSPFSESVKSLESEQAPKLGLCAEEDP 120 Query: 121 VVGALCGQHGPLQDGVAEGPTAPDVVVLPKEEEKEEVIVDDMLANPYVMGVGLLGG 176 VVGALCGQHGPLQDGVAEGPTAPDVVVLPKEEEKEEVIVDDMLANPYVMGVGLLGG Sbjct: 121 VVGALCGQHGPLQDGVAEGPTAPDVVVLPKEEEKEEVIVDDMLANPYVMGVGLLGG 176 >gi|169164989 PREDICTED: similar to FLJ00274 protein [Homo sapiens] Length = 176 Score = 360 bits (923), Expect = e-100 Identities = 176/176 (100%), Positives = 176/176 (100%) Query: 1 MNSPEVLEEGCEEATGVIGGEQVDLGELPDHEEKSNQKVAAATLEDRTQDEPAEESCQIV 60 MNSPEVLEEGCEEATGVIGGEQVDLGELPDHEEKSNQKVAAATLEDRTQDEPAEESCQIV Sbjct: 1 MNSPEVLEEGCEEATGVIGGEQVDLGELPDHEEKSNQKVAAATLEDRTQDEPAEESCQIV 60 Query: 61 LFQNNCMDNFVTSLTGSPYEFFPTKSTSFCRESCSPFSESVKSLESEQAPKLGLCAEEDP 120 LFQNNCMDNFVTSLTGSPYEFFPTKSTSFCRESCSPFSESVKSLESEQAPKLGLCAEEDP Sbjct: 61 LFQNNCMDNFVTSLTGSPYEFFPTKSTSFCRESCSPFSESVKSLESEQAPKLGLCAEEDP 120 Query: 121 VVGALCGQHGPLQDGVAEGPTAPDVVVLPKEEEKEEVIVDDMLANPYVMGVGLLGG 176 VVGALCGQHGPLQDGVAEGPTAPDVVVLPKEEEKEEVIVDDMLANPYVMGVGLLGG Sbjct: 121 VVGALCGQHGPLQDGVAEGPTAPDVVVLPKEEEKEEVIVDDMLANPYVMGVGLLGG 176 >gi|194018497 FYVE, RhoGEF and PH domain containing 5 [Homo sapiens] Length = 1462 Score = 264 bits (674), Expect = 3e-71 Identities = 133/172 (77%), Positives = 146/172 (84%), Gaps = 5/172 (2%) Query: 4 PEVLEEGCEEATGVIGGEQVDLGELPDHEEKSNQKVAAATLEDRTQDEPAEESCQIVLFQ 63 PEVLEEGCEEATGV GGEQVDL E PDHE+K+NQ+VAAATLED QDE AEESCQIV F+ Sbjct: 272 PEVLEEGCEEATGVTGGEQVDLSEPPDHEKKTNQEVAAATLEDHAQDESAEESCQIVPFE 331 Query: 64 NNCMDNFVTSLTGSPYEFFPTKSTSFCRESCSPFSESVKSLESEQAPKLGLCAEEDPVVG 123 N+CM++FVTSLTGSPYEFFPT+STSFC ESCSP SES K LESEQAPKLGL AEE+P+VG Sbjct: 332 NDCMEDFVTSLTGSPYEFFPTESTSFCSESCSPLSESAKGLESEQAPKLGLRAEENPMVG 391 Query: 124 ALCGQHGPLQDGVAEGPTAPDVVVLPKEEEKEEVIVDDMLANPYVMGVGLLG 175 ALCGQ G LQ G AEGP APDVVV+ +EE +DD LANPYVMGVGL G Sbjct: 392 ALCGQCGSLQGGAAEGPAAPDVVVVLEEE-----ALDDALANPYVMGVGLPG 438 >gi|88501738 TRIO and F-actin binding protein isoform 6 [Homo sapiens] Length = 2365 Score = 30.8 bits (68), Expect = 0.63 Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 5/80 (6%) Query: 80 EFFPTKSTSFCRESCSPFSESVKSLESEQAPKLGLCAEEDPVVGALCG--QHGPLQD-GV 136 E P S +S SP + S Q PK+ + P L G Q GPL Sbjct: 1635 EATPVNGHSPALQSQSPVQLPSPACTSTQWPKIKVT--RGPATATLAGLEQTGPLGSRST 1692 Query: 137 AEGPTAPDVVVLPKEEEKEE 156 A+GP+ P++ P+E E+ E Sbjct: 1693 AKGPSLPELQFQPEEPEESE 1712 >gi|21071060 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a-like 1 [Homo sapiens] Length = 954 Score = 30.0 bits (66), Expect = 1.1 Identities = 28/104 (26%), Positives = 42/104 (40%), Gaps = 21/104 (20%) Query: 72 TSLTGSPYEFFPTKSTSFCRESCSPFSESV----KSLESE-------------QAPKLGL 114 TS+ G+P++ S +F RESC P S V ++L S QA + Sbjct: 40 TSIAGNPFQAKQGPSQNFPRESCKPVSHGVIFKQQNLSSSSNADQRPHDSHSFQAKGIWK 99 Query: 115 CAEEDPVVGALCGQHGPLQDGVAEGPTAPDVVVLPKEEEKEEVI 158 EE P C H P G +P + P E K++++ Sbjct: 100 KPEEMPTA---CPGHSPRSQMALTG-ISPPLAQSPPEVPKQQLL 139 >gi|187761314 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a-like 1 [Homo sapiens] Length = 954 Score = 30.0 bits (66), Expect = 1.1 Identities = 28/104 (26%), Positives = 42/104 (40%), Gaps = 21/104 (20%) Query: 72 TSLTGSPYEFFPTKSTSFCRESCSPFSESV----KSLESE-------------QAPKLGL 114 TS+ G+P++ S +F RESC P S V ++L S QA + Sbjct: 40 TSIAGNPFQAKQGPSQNFPRESCKPVSHGVIFKQQNLSSSSNADQRPHDSHSFQAKGIWK 99 Query: 115 CAEEDPVVGALCGQHGPLQDGVAEGPTAPDVVVLPKEEEKEEVI 158 EE P C H P G +P + P E K++++ Sbjct: 100 KPEEMPTA---CPGHSPRSQMALTG-ISPPLAQSPPEVPKQQLL 139 >gi|42734325 wings apart-like homolog [Homo sapiens] Length = 1190 Score = 30.0 bits (66), Expect = 1.1 Identities = 26/100 (26%), Positives = 40/100 (40%), Gaps = 27/100 (27%) Query: 75 TGSPYEF------FPTKSTSFCRESCSPFSESVKSLESEQA-------PKLGLCAEEDPV 121 TG P+ F P S + + CS +SES ++ + E+ K+ ED V Sbjct: 69 TGDPFGFDSDDESLPVSSKNLAQVKCSSYSESSEAAQLEEVTSVLEANSKISHVVVEDTV 128 Query: 122 VGALCGQHGPLQDGVAEGPTAPDVVVLPKEEEKEEVIVDD 161 V C PL+D +L KE+ ++ DD Sbjct: 129 VSDKC---FPLED-----------TLLGKEKSTNRIVEDD 154 >gi|54607027 integrin beta 4 isoform 2 precursor [Homo sapiens] Length = 1805 Score = 29.6 bits (65), Expect = 1.4 Identities = 26/106 (24%), Positives = 47/106 (44%), Gaps = 5/106 (4%) Query: 20 GEQVDLGELPDHEEKSNQKVAAATLEDRTQDEPAEESCQIVLFQNNCMDNF-VTSLTGSP 78 G V G + ++E+ + + RTQD P+ + +L ++N + F VT+ + S Sbjct: 273 GANVLAGIMSRNDERCHLDTTGTYTQYRTQDYPSVPTLVRLLAKHNIIPIFAVTNYSYSY 332 Query: 79 YE----FFPTKSTSFCRESCSPFSESVKSLESEQAPKLGLCAEEDP 120 YE +FP S +E S E ++ + L + A + P Sbjct: 333 YEKLHTYFPVSSLGVLQEDSSNIVELLEEAFNRIRSNLDIRALDSP 378 >gi|54607035 integrin beta 4 isoform 1 precursor [Homo sapiens] Length = 1822 Score = 29.6 bits (65), Expect = 1.4 Identities = 26/106 (24%), Positives = 47/106 (44%), Gaps = 5/106 (4%) Query: 20 GEQVDLGELPDHEEKSNQKVAAATLEDRTQDEPAEESCQIVLFQNNCMDNF-VTSLTGSP 78 G V G + ++E+ + + RTQD P+ + +L ++N + F VT+ + S Sbjct: 273 GANVLAGIMSRNDERCHLDTTGTYTQYRTQDYPSVPTLVRLLAKHNIIPIFAVTNYSYSY 332 Query: 79 YE----FFPTKSTSFCRESCSPFSESVKSLESEQAPKLGLCAEEDP 120 YE +FP S +E S E ++ + L + A + P Sbjct: 333 YEKLHTYFPVSSLGVLQEDSSNIVELLEEAFNRIRSNLDIRALDSP 378 >gi|54607033 integrin beta 4 isoform 3 precursor [Homo sapiens] Length = 1752 Score = 29.6 bits (65), Expect = 1.4 Identities = 26/106 (24%), Positives = 47/106 (44%), Gaps = 5/106 (4%) Query: 20 GEQVDLGELPDHEEKSNQKVAAATLEDRTQDEPAEESCQIVLFQNNCMDNF-VTSLTGSP 78 G V G + ++E+ + + RTQD P+ + +L ++N + F VT+ + S Sbjct: 273 GANVLAGIMSRNDERCHLDTTGTYTQYRTQDYPSVPTLVRLLAKHNIIPIFAVTNYSYSY 332 Query: 79 YE----FFPTKSTSFCRESCSPFSESVKSLESEQAPKLGLCAEEDP 120 YE +FP S +E S E ++ + L + A + P Sbjct: 333 YEKLHTYFPVSSLGVLQEDSSNIVELLEEAFNRIRSNLDIRALDSP 378 >gi|50897856 hypothetical protein LOC220965 isoform 1 [Homo sapiens] Length = 585 Score = 29.3 bits (64), Expect = 1.8 Identities = 30/116 (25%), Positives = 47/116 (40%), Gaps = 11/116 (9%) Query: 11 CEEATGVIGGEQVDLGELPDHEEKSNQKVAAATLEDRTQD--EPAEESCQIVLFQNN--- 65 C+E + +Q D L D K N A A +E+ EP +++ + + ++ Sbjct: 22 CDEDPVSLHEDQTDCSSLRDENNKENYPDAGALVEEHAPPSWEPQQQNVEATVLVDSVLR 81 Query: 66 -CMDNFVTSLTGSPYEFFPTKSTSFCRESCSPFSESVKSLESEQAPKLGLCAEEDP 120 M NF + P F +S ES +E V S +SE + G A E P Sbjct: 82 PSMGNFKSR---KPKSIFKAESGRSHGESQE--TEHVVSSQSECQVRAGTPAHESP 132 >gi|50897854 hypothetical protein LOC220965 isoform 2 [Homo sapiens] Length = 487 Score = 29.3 bits (64), Expect = 1.8 Identities = 30/116 (25%), Positives = 47/116 (40%), Gaps = 11/116 (9%) Query: 11 CEEATGVIGGEQVDLGELPDHEEKSNQKVAAATLEDRTQD--EPAEESCQIVLFQNN--- 65 C+E + +Q D L D K N A A +E+ EP +++ + + ++ Sbjct: 22 CDEDPVSLHEDQTDCSSLRDENNKENYPDAGALVEEHAPPSWEPQQQNVEATVLVDSVLR 81 Query: 66 -CMDNFVTSLTGSPYEFFPTKSTSFCRESCSPFSESVKSLESEQAPKLGLCAEEDP 120 M NF + P F +S ES +E V S +SE + G A E P Sbjct: 82 PSMGNFKSR---KPKSIFKAESGRSHGESQE--TEHVVSSQSECQVRAGTPAHESP 132 >gi|38026934 Rho guanine nucleotide exchange factor (GEF) 11 isoform 2 [Homo sapiens] Length = 1562 Score = 28.5 bits (62), Expect = 3.1 Identities = 17/67 (25%), Positives = 31/67 (46%), Gaps = 8/67 (11%) Query: 77 SPYEFFPTKSTSFCRESCSPFSESVKSLESEQAPKLGLCAEEDPVVGALCGQHGPLQDGV 136 +P F T++ + S SP ++ + +S + +LG C E+ G PL+D Sbjct: 1502 TPVGSFHTEAARWTDGSLSPPAKEPLASDSRNSHELGPCPED--------GSDAPLEDST 1553 Query: 137 AEGPTAP 143 A+ +P Sbjct: 1554 ADAAASP 1560 >gi|7662086 Rho guanine nucleotide exchange factor (GEF) 11 isoform 1 [Homo sapiens] Length = 1522 Score = 28.5 bits (62), Expect = 3.1 Identities = 17/67 (25%), Positives = 31/67 (46%), Gaps = 8/67 (11%) Query: 77 SPYEFFPTKSTSFCRESCSPFSESVKSLESEQAPKLGLCAEEDPVVGALCGQHGPLQDGV 136 +P F T++ + S SP ++ + +S + +LG C E+ G PL+D Sbjct: 1462 TPVGSFHTEAARWTDGSLSPPAKEPLASDSRNSHELGPCPED--------GSDAPLEDST 1513 Query: 137 AEGPTAP 143 A+ +P Sbjct: 1514 ADAAASP 1520 >gi|9966883 protocadherin 9 isoform 2 precursor [Homo sapiens] Length = 1203 Score = 28.1 bits (61), Expect = 4.1 Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 4/62 (6%) Query: 50 DEPAEESCQIVLFQNNCMDNFVTSLTGSPYEFFPTKSTSFCRESCSPFSESVKSLESEQA 109 D A E+ + L N DNFV PY + SF RE S ++ VK+ + Q Sbjct: 598 DADAGENKAVTLSILNDNDNFVLD----PYSGVIKSNVSFDREQQSSYTFDVKATDGGQP 653 Query: 110 PK 111 P+ Sbjct: 654 PR 655 >gi|45243534 protocadherin 9 isoform 1 precursor [Homo sapiens] Length = 1237 Score = 28.1 bits (61), Expect = 4.1 Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 4/62 (6%) Query: 50 DEPAEESCQIVLFQNNCMDNFVTSLTGSPYEFFPTKSTSFCRESCSPFSESVKSLESEQA 109 D A E+ + L N DNFV PY + SF RE S ++ VK+ + Q Sbjct: 598 DADAGENKAVTLSILNDNDNFVLD----PYSGVIKSNVSFDREQQSSYTFDVKATDGGQP 653 Query: 110 PK 111 P+ Sbjct: 654 PR 655 >gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens] Length = 2400 Score = 28.1 bits (61), Expect = 4.1 Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 8/65 (12%) Query: 92 ESCSPFSESVKSLESEQAPKLGLCAEEDPVVGALCGQHGPLQDGVAEGPTAPDVVVLPKE 151 + P +ESV++LE+E E++P Q AEG T P+ V+ + Sbjct: 1913 KEAQPETESVEALETE--------GEDEPESEGAEAQEAEEAAQEAEGQTQPESEVIESQ 1964 Query: 152 EEKEE 156 E +EE Sbjct: 1965 EAEEE 1969 >gi|113204617 skeletal muscle ryanodine receptor isoform 2 [Homo sapiens] Length = 5033 Score = 27.7 bits (60), Expect = 5.4 Identities = 31/116 (26%), Positives = 47/116 (40%), Gaps = 3/116 (2%) Query: 1 MNSPEVLEEGCEEATGVIGGEQVDLGEL-PDHEEKSNQKVAAATLEDRTQDEPAEESCQI 59 M PEV E EE GE+ D E D EE + +K E+ + EE + Sbjct: 1865 MIEPEVFTEEEEEEDEEEEGEEEDEEEKEEDEEETAQEKEDEEKEEEEAAEGEKEEGLEE 1924 Query: 60 VLFQNNCMDNFVTSLTGSPYEFFPTKSTSFCRESCSPFSES-VKSLESEQAPKLGL 114 L Q ++ + E+F + ES + F+E V L++ Q + GL Sbjct: 1925 GLLQMKLPESVKLQMC-HLLEYFCDQELQHRVESLAAFAERYVDKLQANQRSRYGL 1979 >gi|113204615 skeletal muscle ryanodine receptor isoform 1 [Homo sapiens] Length = 5038 Score = 27.7 bits (60), Expect = 5.4 Identities = 31/116 (26%), Positives = 47/116 (40%), Gaps = 3/116 (2%) Query: 1 MNSPEVLEEGCEEATGVIGGEQVDLGEL-PDHEEKSNQKVAAATLEDRTQDEPAEESCQI 59 M PEV E EE GE+ D E D EE + +K E+ + EE + Sbjct: 1865 MIEPEVFTEEEEEEDEEEEGEEEDEEEKEEDEEETAQEKEDEEKEEEEAAEGEKEEGLEE 1924 Query: 60 VLFQNNCMDNFVTSLTGSPYEFFPTKSTSFCRESCSPFSES-VKSLESEQAPKLGL 114 L Q ++ + E+F + ES + F+E V L++ Q + GL Sbjct: 1925 GLLQMKLPESVKLQMC-HLLEYFCDQELQHRVESLAAFAERYVDKLQANQRSRYGL 1979 >gi|226442779 jumonji domain containing 1A [Homo sapiens] Length = 1321 Score = 27.7 bits (60), Expect = 5.4 Identities = 16/48 (33%), Positives = 24/48 (50%) Query: 63 QNNCMDNFVTSLTGSPYEFFPTKSTSFCRESCSPFSESVKSLESEQAP 110 Q N +++ +LTG P E PTK++S + E K LE +P Sbjct: 399 QENRLESVPQALTGLPKECLPTKASSKAELEIANPPELQKHLEHAPSP 446 >gi|20357522 jumonji domain containing 1A [Homo sapiens] Length = 1321 Score = 27.7 bits (60), Expect = 5.4 Identities = 16/48 (33%), Positives = 24/48 (50%) Query: 63 QNNCMDNFVTSLTGSPYEFFPTKSTSFCRESCSPFSESVKSLESEQAP 110 Q N +++ +LTG P E PTK++S + E K LE +P Sbjct: 399 QENRLESVPQALTGLPKECLPTKASSKAELEIANPPELQKHLEHAPSP 446 >gi|187829452 autism susceptibility candidate 2 isoform 2 [Homo sapiens] Length = 1235 Score = 27.7 bits (60), Expect = 5.4 Identities = 28/120 (23%), Positives = 45/120 (37%), Gaps = 16/120 (13%) Query: 63 QNNCMDNFVTSLTGSPYEFFPTKSTSFCRESCSPFSESVKSL---ESEQAPKLGLCAEE- 118 QN+C D+ S +G F + S +S +P S +S+Q K + E Sbjct: 179 QNSCRDSDSESASGESKGFHRSSSRERLSDSSAPSSLGTGYFCDSDSDQEEKASDASSEK 238 Query: 119 ---------DPVVGALCGQHGPLQDGVAEGPTAPDVVVLPKEEEKEEVIVDDMLANPYVM 169 DP +G P D GP P + L + +EK + + + P V+ Sbjct: 239 LFNTVIVNKDPELGV---GTLPEHDSQDAGPIVPKISGLERSQEKSQDCCKEPIFEPVVL 295 >gi|17864090 autism susceptibility candidate 2 isoform 1 [Homo sapiens] Length = 1259 Score = 27.7 bits (60), Expect = 5.4 Identities = 28/120 (23%), Positives = 45/120 (37%), Gaps = 16/120 (13%) Query: 63 QNNCMDNFVTSLTGSPYEFFPTKSTSFCRESCSPFSESVKSL---ESEQAPKLGLCAEE- 118 QN+C D+ S +G F + S +S +P S +S+Q K + E Sbjct: 179 QNSCRDSDSESASGESKGFHRSSSRERLSDSSAPSSLGTGYFCDSDSDQEEKASDASSEK 238 Query: 119 ---------DPVVGALCGQHGPLQDGVAEGPTAPDVVVLPKEEEKEEVIVDDMLANPYVM 169 DP +G P D GP P + L + +EK + + + P V+ Sbjct: 239 LFNTVIVNKDPELGV---GTLPEHDSQDAGPIVPKISGLERSQEKSQDCCKEPIFEPVVL 295 >gi|156546888 F-box protein 40 [Homo sapiens] Length = 709 Score = 27.7 bits (60), Expect = 5.4 Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 2/55 (3%) Query: 8 EEGCEEATGVIGGEQVDLGELPDHEEKSNQKVAAATLEDRTQDEPAEESCQIVLF 62 E EE G +GG VD+G +P +N ++A + E+R +E +V F Sbjct: 163 ETSVEEMGGAVGG--VDIGLVPHGLSATNGEMAELSQEEREVLAKTKEGMDLVKF 215 >gi|239757584 PREDICTED: similar to SH3-binding domain and glutamic acid-rich protein [Homo sapiens] Length = 218 Score = 27.3 bits (59), Expect = 7.0 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%) Query: 5 EVLEEGCEEATGVIGGEQVDLGELPDHEEKSNQKVAAATLEDRT 48 E EEG E G E D+G LP+ +EK+ ++ AT E R+ Sbjct: 170 EKAEEGGETEAQKEGSE--DVGNLPEAQEKNEEEGETATEEVRS 211 >gi|22538387 A-kinase anchor protein 9 isoform 2 [Homo sapiens] Length = 3907 Score = 27.3 bits (59), Expect = 7.0 Identities = 10/36 (27%), Positives = 23/36 (63%) Query: 22 QVDLGELPDHEEKSNQKVAAATLEDRTQDEPAEESC 57 Q DL ++ DH ++ +K++ ED T+ + ++++C Sbjct: 2730 QKDLSQVRDHLAEAKEKLSILEKEDETEVQESKKAC 2765 >gi|22538393 A-kinase anchor protein 9 isoform 3 [Homo sapiens] Length = 3899 Score = 27.3 bits (59), Expect = 7.0 Identities = 10/36 (27%), Positives = 23/36 (63%) Query: 22 QVDLGELPDHEEKSNQKVAAATLEDRTQDEPAEESC 57 Q DL ++ DH ++ +K++ ED T+ + ++++C Sbjct: 2722 QKDLSQVRDHLAEAKEKLSILEKEDETEVQESKKAC 2757 >gi|32130516 serologically defined colon cancer antigen 1 [Homo sapiens] Length = 1076 Score = 27.3 bits (59), Expect = 7.0 Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 3/61 (4%) Query: 38 KVAAATLEDRTQDEPAEESCQIVLFQNNCMDNFVTSLTGSPYEFFPTKSTSFCRESCSPF 97 +V L+D D+P ++ + L Q +N SLTG P+ P F C+P+ Sbjct: 947 EVITHELQDFAVDDPHDDKEEQDLDQQGNEENLFDSLTGQPH---PEDVLLFAIPICAPY 1003 Query: 98 S 98 + Sbjct: 1004 T 1004 >gi|11545835 TSPY-like 2 [Homo sapiens] Length = 693 Score = 27.3 bits (59), Expect = 7.0 Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 1/66 (1%) Query: 96 PFSESVKSLESEQAPKLGLCAEEDPVVGALCGQHGPLQDGVAEGPTAPDVVVLPKEEEKE 155 P +ES+++L + +A L + V + G G L+ A G AP +V PK +E+ Sbjct: 110 PPTESLEALPTPEASGGSLEIDFQVVQSSSFGGEGALETCSAVG-WAPQRLVDPKSKEEA 168 Query: 156 EVIVDD 161 +IV+D Sbjct: 169 IIIVED 174 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.310 0.131 0.381 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 7,807,804 Number of Sequences: 37866 Number of extensions: 376237 Number of successful extensions: 871 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 24 Number of HSP's that attempted gapping in prelim test: 858 Number of HSP's gapped (non-prelim): 36 length of query: 176 length of database: 18,247,518 effective HSP length: 95 effective length of query: 81 effective length of database: 14,650,248 effective search space: 1186670088 effective search space used: 1186670088 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.7 bits) S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.